| Clone Name | FLbaf35b06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830423.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125J07, full insert sequence Length = 1282 Score = 660 bits (333), Expect = 0.0 Identities = 769/913 (84%), Gaps = 6/913 (0%) Strand = Plus / Plus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 120 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 178 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 179 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 236 Query: 293 aagtttttccttgacatccgttaatttccccgctccggcaaccggagccaagggtccaat 352 ||||||||| || | ||||||||||| || | ||| |||| |||| |||||||||||| Sbjct: 237 aagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaat 296 Query: 353 tttcgaagacggacccaactttgacacggcatttcgagttttccacggcagagacggggt 412 ||| ||||| |||||||| ||||||| |||||||||||||||||| ||| ||| ||||| Sbjct: 297 ttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggt 356 Query: 413 tgttccgctttcagaaggagcctttgcacatattgagaagcctctgccaaagcccactcc 472 |||||| |||||| ||||| | |||| | |||||||||| |||||||||||| ||| Sbjct: 357 tgttccactttcacaaggatcatttgagcgatttgagaagccaatgccaaagcccaatcc 416 Query: 473 tgaatttaaccccttggcagccaaagcagctaccatcagtctctcaggatttggaggctt 532 |||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| || Sbjct: 417 tgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttt 476 Query: 533 tttcagcttcggtgatttctcaaacaagcgcaataagcagaactccaacaagaagaatcc 592 ||||||||| |||||||||||||| |||||||||||| |||| ||| | ||||| || Sbjct: 477 tttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcc 536 Query: 593 caacaacctcccccagaataaaggccagtctaataacaatcatgaagcggtgagcaacaa 652 ||||||||| |||||||| ||| ||| |||||||| |||||||| ||||||| | Sbjct: 537 caacaaccttccccagaacggaggtcagcctaataac---catgaagcactgagcaatga 593 Query: 653 ttggctggaaaatggtcaatgccctcttgcaaagtcatatagagcaatcggtggagtcgt 712 |||||||||| ||||||||||| || |||||||| || || ||| | |||| ||||| Sbjct: 594 gtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgt 653 Query: 713 gcctcttgtcgcaaagctgctgacacccccagctggtatgaaactgacgtgccctcctgc 772 ||| || ||||||||| || |||||||||| |||||||||||||||| ||||| ||||| Sbjct: 654 gcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgc 713 Query: 773 gattgttgctgcccgtgcagcaatatcccgcacggcatttgcgaaggggcttcgccctca 832 | ||||| |||||||||||| |||| ||||| || ||||| ||||||||||| ||||| Sbjct: 714 agtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctca 773 Query: 833 gcccctaccaacaaaagtagtggtgatcgcgctgctcggtatggcagcaaatgttcctct 892 ||||||||| || ||| || ||||||| ||| |||| |||||||||||||| ||||| || Sbjct: 774 gcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttcccct 833 Query: 893 tggcatctggagggagcacaccacaaagttttcagtgcagtggtttgcggcggtccatgc 952 ||||||||||||||||||||| || || ||||||||||||||||| || |||||||| Sbjct: 834 tggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgc 893 Query: 953 tgcagtgcctttcatagggatgctgaggaagtccatcctaatgccgaagagcgccatggc 1012 || || ||||||||||| ||||| |||||||| | || ||||| |||| |||||||| Sbjct: 894 ggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggc 953 Query: 1013 ccttacaatagctgcctcgatattgggtcagacaattggttcaagagctgagcgtatcag 1072 ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 954 gcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcag 1013 Query: 1073 gttgaagagggca 1085 |||||||||||| Sbjct: 1014 attgaagagggca 1026
>ref|NM_001072049.1| Oryza sativa (japonica cultivar-group) Os10g0580900 (Os10g0580900) mRNA, complete cds Length = 1357 Score = 652 bits (329), Expect = 0.0 Identities = 768/913 (84%), Gaps = 6/913 (0%) Strand = Plus / Plus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 141 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 199 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 200 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 257 Query: 293 aagtttttccttgacatccgttaatttccccgctccggcaaccggagccaagggtccaat 352 ||||||||| || | ||||||||||| || | ||| |||| |||| |||||||||||| Sbjct: 258 aagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaat 317 Query: 353 tttcgaagacggacccaactttgacacggcatttcgagttttccacggcagagacggggt 412 ||| ||||| |||||||| ||||||| |||||||||||||||||| ||| ||| ||||| Sbjct: 318 ttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggt 377 Query: 413 tgttccgctttcagaaggagcctttgcacatattgagaagcctctgccaaagcccactcc 472 |||||| |||||| | ||| | |||| | |||||||||| |||||||||||| ||| Sbjct: 378 tgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcc 437 Query: 473 tgaatttaaccccttggcagccaaagcagctaccatcagtctctcaggatttggaggctt 532 |||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| || Sbjct: 438 tgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttt 497 Query: 533 tttcagcttcggtgatttctcaaacaagcgcaataagcagaactccaacaagaagaatcc 592 ||||||||| |||||||||||||| |||||||||||| |||| ||| | ||||| || Sbjct: 498 tttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcc 557 Query: 593 caacaacctcccccagaataaaggccagtctaataacaatcatgaagcggtgagcaacaa 652 ||||||||| |||||||| ||| ||| |||||||| |||||||| ||||||| | Sbjct: 558 caacaaccttccccagaacggaggtcagcctaataac---catgaagcactgagcaatga 614 Query: 653 ttggctggaaaatggtcaatgccctcttgcaaagtcatatagagcaatcggtggagtcgt 712 |||||||||| ||||||||||| || |||||||| || || ||| | |||| ||||| Sbjct: 615 gtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgt 674 Query: 713 gcctcttgtcgcaaagctgctgacacccccagctggtatgaaactgacgtgccctcctgc 772 ||| || ||||||||| || |||||||||| |||||||||||||||| ||||| ||||| Sbjct: 675 gcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgc 734 Query: 773 gattgttgctgcccgtgcagcaatatcccgcacggcatttgcgaaggggcttcgccctca 832 | ||||| |||||||||||| |||| ||||| || ||||| ||||||||||| ||||| Sbjct: 735 agtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctca 794 Query: 833 gcccctaccaacaaaagtagtggtgatcgcgctgctcggtatggcagcaaatgttcctct 892 ||||||||| || ||| || ||||||| ||| |||| |||||||||||||| ||||| || Sbjct: 795 gcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttcccct 854 Query: 893 tggcatctggagggagcacaccacaaagttttcagtgcagtggtttgcggcggtccatgc 952 ||||||||||||||||||||| || || ||||||||||||||||| || |||||||| Sbjct: 855 tggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgc 914 Query: 953 tgcagtgcctttcatagggatgctgaggaagtccatcctaatgccgaagagcgccatggc 1012 || || ||||||||||| ||||| |||||||| | || ||||| |||| |||||||| Sbjct: 915 ggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggc 974 Query: 1013 ccttacaatagctgcctcgatattgggtcagacaattggttcaagagctgagcgtatcag 1072 ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 975 gcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcag 1034 Query: 1073 gttgaagagggca 1085 |||||||||||| Sbjct: 1035 attgaagagggca 1047
>dbj|AK104136.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F07, full insert sequence Length = 1281 Score = 652 bits (329), Expect = 0.0 Identities = 768/913 (84%), Gaps = 6/913 (0%) Strand = Plus / Plus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 119 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 177 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 178 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 235 Query: 293 aagtttttccttgacatccgttaatttccccgctccggcaaccggagccaagggtccaat 352 ||||||||| || | ||||||||||| || | ||| |||| |||| |||||||||||| Sbjct: 236 aagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaat 295 Query: 353 tttcgaagacggacccaactttgacacggcatttcgagttttccacggcagagacggggt 412 ||| ||||| |||||||| ||||||| |||||||||||||||||| ||| ||| ||||| Sbjct: 296 ttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggt 355 Query: 413 tgttccgctttcagaaggagcctttgcacatattgagaagcctctgccaaagcccactcc 472 |||||| |||||| | ||| | |||| | |||||||||| |||||||||||| ||| Sbjct: 356 tgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcc 415 Query: 473 tgaatttaaccccttggcagccaaagcagctaccatcagtctctcaggatttggaggctt 532 |||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| || Sbjct: 416 tgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttt 475 Query: 533 tttcagcttcggtgatttctcaaacaagcgcaataagcagaactccaacaagaagaatcc 592 ||||||||| |||||||||||||| |||||||||||| |||| ||| | ||||| || Sbjct: 476 tttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcc 535 Query: 593 caacaacctcccccagaataaaggccagtctaataacaatcatgaagcggtgagcaacaa 652 ||||||||| |||||||| ||| ||| |||||||| |||||||| ||||||| | Sbjct: 536 caacaaccttccccagaacggaggtcagcctaataac---catgaagcactgagcaatga 592 Query: 653 ttggctggaaaatggtcaatgccctcttgcaaagtcatatagagcaatcggtggagtcgt 712 |||||||||| ||||||||||| || |||||||| || || ||| | |||| ||||| Sbjct: 593 gtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgt 652 Query: 713 gcctcttgtcgcaaagctgctgacacccccagctggtatgaaactgacgtgccctcctgc 772 ||| || ||||||||| || |||||||||| |||||||||||||||| ||||| ||||| Sbjct: 653 gcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgc 712 Query: 773 gattgttgctgcccgtgcagcaatatcccgcacggcatttgcgaaggggcttcgccctca 832 | ||||| |||||||||||| |||| ||||| || ||||| ||||||||||| ||||| Sbjct: 713 agtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctca 772 Query: 833 gcccctaccaacaaaagtagtggtgatcgcgctgctcggtatggcagcaaatgttcctct 892 ||||||||| || ||| || ||||||| ||| |||| |||||||||||||| ||||| || Sbjct: 773 gcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttcccct 832 Query: 893 tggcatctggagggagcacaccacaaagttttcagtgcagtggtttgcggcggtccatgc 952 ||||||||||||||||||||| || || ||||||||||||||||| || |||||||| Sbjct: 833 tggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgc 892 Query: 953 tgcagtgcctttcatagggatgctgaggaagtccatcctaatgccgaagagcgccatggc 1012 || || ||||||||||| ||||| |||||||| | || ||||| |||| |||||||| Sbjct: 893 ggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggc 952 Query: 1013 ccttacaatagctgcctcgatattgggtcagacaattggttcaagagctgagcgtatcag 1072 ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 953 gcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcag 1012 Query: 1073 gttgaagagggca 1085 |||||||||||| Sbjct: 1013 attgaagagggca 1025
>dbj|AK072734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G14, full insert sequence Length = 1357 Score = 652 bits (329), Expect = 0.0 Identities = 768/913 (84%), Gaps = 6/913 (0%) Strand = Plus / Plus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 141 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 199 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 200 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 257 Query: 293 aagtttttccttgacatccgttaatttccccgctccggcaaccggagccaagggtccaat 352 ||||||||| || | ||||||||||| || | ||| |||| |||| |||||||||||| Sbjct: 258 aagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaat 317 Query: 353 tttcgaagacggacccaactttgacacggcatttcgagttttccacggcagagacggggt 412 ||| ||||| |||||||| ||||||| |||||||||||||||||| ||| ||| ||||| Sbjct: 318 ttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggt 377 Query: 413 tgttccgctttcagaaggagcctttgcacatattgagaagcctctgccaaagcccactcc 472 |||||| |||||| | ||| | |||| | |||||||||| |||||||||||| ||| Sbjct: 378 tgttccactttcacatggatcatttgagcgatttgagaagccaatgccaaagcccaatcc 437 Query: 473 tgaatttaaccccttggcagccaaagcagctaccatcagtctctcaggatttggaggctt 532 |||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| || Sbjct: 438 tgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttt 497 Query: 533 tttcagcttcggtgatttctcaaacaagcgcaataagcagaactccaacaagaagaatcc 592 ||||||||| |||||||||||||| |||||||||||| |||| ||| | ||||| || Sbjct: 498 tttcagctttggtgatttctcaaataagcgcaataagaagaatagtaaccaaaagaagcc 557 Query: 593 caacaacctcccccagaataaaggccagtctaataacaatcatgaagcggtgagcaacaa 652 ||||||||| |||||||| ||| ||| |||||||| |||||||| ||||||| | Sbjct: 558 caacaaccttccccagaacggaggtcagcctaataac---catgaagcactgagcaatga 614 Query: 653 ttggctggaaaatggtcaatgccctcttgcaaagtcatatagagcaatcggtggagtcgt 712 |||||||||| ||||||||||| || |||||||| || || ||| | |||| ||||| Sbjct: 615 gtggctggaaatgggtcaatgccccctggcaaagtcgtacagggcattaagtggtgtcgt 674 Query: 713 gcctcttgtcgcaaagctgctgacacccccagctggtatgaaactgacgtgccctcctgc 772 ||| || ||||||||| || |||||||||| |||||||||||||||| ||||| ||||| Sbjct: 675 gcccctcgtcgcaaagatgatgacacccccggctggtatgaaactgagatgcccacctgc 734 Query: 773 gattgttgctgcccgtgcagcaatatcccgcacggcatttgcgaaggggcttcgccctca 832 | ||||| |||||||||||| |||| ||||| || ||||| ||||||||||| ||||| Sbjct: 735 agtagttgccgcccgtgcagcactatcacgcacagcctttgccaaggggcttcgtcctca 794 Query: 833 gcccctaccaacaaaagtagtggtgatcgcgctgctcggtatggcagcaaatgttcctct 892 ||||||||| || ||| || ||||||| ||| |||| |||||||||||||| ||||| || Sbjct: 795 gcccctaccgacgaaaatactggtgatggcgttgcttggtatggcagcaaacgttcccct 854 Query: 893 tggcatctggagggagcacaccacaaagttttcagtgcagtggtttgcggcggtccatgc 952 ||||||||||||||||||||| || || ||||||||||||||||| || |||||||| Sbjct: 855 tggcatctggagggagcacacggagaaattctcagtgcagtggtttgccgcagtccatgc 914 Query: 953 tgcagtgcctttcatagggatgctgaggaagtccatcctaatgccgaagagcgccatggc 1012 || || ||||||||||| ||||| |||||||| | || ||||| |||| |||||||| Sbjct: 915 ggcggtacctttcataggcatgctcaggaagtctgtgctgatgccaaagacagccatggc 974 Query: 1013 ccttacaatagctgcctcgatattgggtcagacaattggttcaagagctgagcgtatcag 1072 ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 975 gcttaccatagctgcctcaatattgggtcagacaattggttcgagagctgagcgtatcag 1034 Query: 1073 gttgaagagggca 1085 |||||||||||| Sbjct: 1035 attgaagagggca 1047
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 359 bits (181), Expect = 2e-95 Identities = 385/453 (84%) Strand = Plus / Minus Query: 633 catgaagcggtgagcaacaattggctggaaaatggtcaatgccctcttgcaaagtcatat 692 |||||||| ||||||| | |||||||||| ||||||||||| || |||||||| || Sbjct: 22672852 catgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtac 22672793 Query: 693 agagcaatcggtggagtcgtgcctcttgtcgcaaagctgctgacacccccagctggtatg 752 || ||| | |||| |||||||| || ||||||||| || |||||||||| ||||||||| Sbjct: 22672792 agggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatg 22672733 Query: 753 aaactgacgtgccctcctgcgattgttgctgcccgtgcagcaatatcccgcacggcattt 812 ||||||| ||||| ||||| | ||||| |||||||||||| |||| ||||| || ||| Sbjct: 22672732 aaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagccttt 22672673 Query: 813 gcgaaggggcttcgccctcagcccctaccaacaaaagtagtggtgatcgcgctgctcggt 872 || ||||||||||| |||||||||||||| || ||| || ||||||| ||| |||| ||| Sbjct: 22672672 gccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggt 22672613 Query: 873 atggcagcaaatgttcctcttggcatctggagggagcacaccacaaagttttcagtgcag 932 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||||||| Sbjct: 22672612 atggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcag 22672553 Query: 933 tggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaagtccatccta 992 |||||||| || |||||||| || || ||||||||||| ||||| |||||||| | || Sbjct: 22672552 tggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctg 22672493 Query: 993 atgccgaagagcgccatggcccttacaatagctgcctcgatattgggtcagacaattggt 1052 ||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 22672492 atgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggt 22672433 Query: 1053 tcaagagctgagcgtatcaggttgaagagggca 1085 || ||||||||||||||||| |||||||||||| Sbjct: 22672432 tcgagagctgagcgtatcagattgaagagggca 22672400 Score = 240 bits (121), Expect = 1e-59 Identities = 235/273 (86%) Strand = Plus / Minus Query: 336 ggagccaagggtccaattttcgaagacggacccaactttgacacggcatttcgagttttc 395 |||| ||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||| Sbjct: 22673476 ggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttc 22673417 Query: 396 cacggcagagacggggttgttccgctttcagaaggagcctttgcacatattgagaagcct 455 || ||| ||| ||||||||||| |||||| | ||| | |||| | |||||||||| Sbjct: 22673416 catggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagcca 22673357 Query: 456 ctgccaaagcccactcctgaatttaaccccttggcagccaaagcagctaccatcagtctc 515 |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 22673356 atgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctc 22673297 Query: 516 tcaggatttggaggctttttcagcttcggtgatttctcaaacaagcgcaataagcagaac 575 || | ||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 22673296 tctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaat 22673237 Query: 576 tccaacaagaagaatcccaacaacctcccccag 608 ||| | ||||| ||||||||||| |||||| Sbjct: 22673236 agtaaccaaaagaagcccaacaaccttccccag 22673204 Score = 89.7 bits (45), Expect = 3e-14 Identities = 122/147 (82%), Gaps = 3/147 (2%) Strand = Plus / Minus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 22673740 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 22673682 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 22673681 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 22673624 Query: 293 aagtttttccttgacatccgttaattt 319 ||||||||| || | ||||||||||| Sbjct: 22673623 aagtttttcattctcgtccgttaattt 22673597
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 359 bits (181), Expect = 2e-95 Identities = 385/453 (84%) Strand = Plus / Minus Query: 633 catgaagcggtgagcaacaattggctggaaaatggtcaatgccctcttgcaaagtcatat 692 |||||||| ||||||| | |||||||||| ||||||||||| || |||||||| || Sbjct: 127521 catgaagcactgagcaatgagtggctggaaatgggtcaatgccccctggcaaagtcgtac 127462 Query: 693 agagcaatcggtggagtcgtgcctcttgtcgcaaagctgctgacacccccagctggtatg 752 || ||| | |||| |||||||| || ||||||||| || |||||||||| ||||||||| Sbjct: 127461 agggcattaagtggtgtcgtgcccctcgtcgcaaagatgatgacacccccggctggtatg 127402 Query: 753 aaactgacgtgccctcctgcgattgttgctgcccgtgcagcaatatcccgcacggcattt 812 ||||||| ||||| ||||| | ||||| |||||||||||| |||| ||||| || ||| Sbjct: 127401 aaactgagatgcccacctgcagtagttgccgcccgtgcagcactatcacgcacagccttt 127342 Query: 813 gcgaaggggcttcgccctcagcccctaccaacaaaagtagtggtgatcgcgctgctcggt 872 || ||||||||||| |||||||||||||| || ||| || ||||||| ||| |||| ||| Sbjct: 127341 gccaaggggcttcgtcctcagcccctaccgacgaaaatactggtgatggcgttgcttggt 127282 Query: 873 atggcagcaaatgttcctcttggcatctggagggagcacaccacaaagttttcagtgcag 932 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||||||| Sbjct: 127281 atggcagcaaacgttccccttggcatctggagggagcacacggagaaattctcagtgcag 127222 Query: 933 tggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaagtccatccta 992 |||||||| || |||||||| || || ||||||||||| ||||| |||||||| | || Sbjct: 127221 tggtttgccgcagtccatgcggcggtacctttcataggcatgctcaggaagtctgtgctg 127162 Query: 993 atgccgaagagcgccatggcccttacaatagctgcctcgatattgggtcagacaattggt 1052 ||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 127161 atgccaaagacagccatggcgcttaccatagctgcctcaatattgggtcagacaattggt 127102 Query: 1053 tcaagagctgagcgtatcaggttgaagagggca 1085 || ||||||||||||||||| |||||||||||| Sbjct: 127101 tcgagagctgagcgtatcagattgaagagggca 127069 Score = 240 bits (121), Expect = 1e-59 Identities = 235/273 (86%) Strand = Plus / Minus Query: 336 ggagccaagggtccaattttcgaagacggacccaactttgacacggcatttcgagttttc 395 |||| ||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||| Sbjct: 128145 ggagacaagggtccaatttttgaagatggacccaattttgacatggcatttcgagttttc 128086 Query: 396 cacggcagagacggggttgttccgctttcagaaggagcctttgcacatattgagaagcct 455 || ||| ||| ||||||||||| |||||| | ||| | |||| | |||||||||| Sbjct: 128085 catggccaagatggggttgttccactttcacatggatcatttgagcgatttgagaagcca 128026 Query: 456 ctgccaaagcccactcctgaatttaaccccttggcagccaaagcagctaccatcagtctc 515 |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 128025 atgccaaagcccaatcctgaatttaaccccttggctgctaaagcagctaccatcagtctc 127966 Query: 516 tcaggatttggaggctttttcagcttcggtgatttctcaaacaagcgcaataagcagaac 575 || | ||||||||| ||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 127965 tctgcatttggaggttttttcagctttggtgatttctcaaataagcgcaataagaagaat 127906 Query: 576 tccaacaagaagaatcccaacaacctcccccag 608 ||| | ||||| ||||||||||| |||||| Sbjct: 127905 agtaaccaaaagaagcccaacaaccttccccag 127873 Score = 89.7 bits (45), Expect = 3e-14 Identities = 122/147 (82%), Gaps = 3/147 (2%) Strand = Plus / Minus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 128409 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 128351 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 128350 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 128293 Query: 293 aagtttttccttgacatccgttaattt 319 ||||||||| || | ||||||||||| Sbjct: 128292 aagtttttcattctcgtccgttaattt 128266
>emb|CT832102.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN054N11, full insert sequence Length = 598 Score = 309 bits (156), Expect = 1e-80 Identities = 335/394 (85%), Gaps = 3/394 (0%) Strand = Plus / Plus Query: 173 tgttcacatggattcctttttccaaagagctttcggtgacccaatgtgctcggaagacag 232 |||||| |||||| ||||||||| ||||||| | ||||||| |||||| |||||||| Sbjct: 208 tgttcatatggatccctttttccgcagagcttccagtgaccccttgtgcttggaagaca- 266 Query: 233 taatgttgtccagcaaggaattgaacgatgcccattcctgaggaacatcaacgagcctac 292 | ||||| || ||||||||| ||||||||||||| ||||||||||| |||||||| Sbjct: 267 --actccgtccaacatggaattgaaagatgcccattcctaaggaacatcaatgagcctac 324 Query: 293 aagtttttccttgacatccgttaatttccccgctccggcaaccggagccaagggtccaat 352 ||||||||| || | ||||||||||| || | ||| |||| |||| |||||||||||| Sbjct: 325 aagtttttcattctcgtccgttaattttcctgttcctgcaagaggagacaagggtccaat 384 Query: 353 tttcgaagacggacccaactttgacacggcatttcgagttttccacggcagagacggggt 412 ||| ||||| |||||||| ||||||| |||||||||||||||||| ||| ||| ||||| Sbjct: 385 ttttgaagatggacccaattttgacatggcatttcgagttttccatggccaagatggggt 444 Query: 413 tgttccgctttcagaaggagcctttgcacatattgagaagcctctgccaaagcccactcc 472 |||||| |||||| ||||| | |||| | |||||||||| |||||||||||| ||| Sbjct: 445 tgttccactttcacaaggatcatttgagcgatttgagaagccaatgccaaagcccaatcc 504 Query: 473 tgaatttaaccccttggcagccaaagcagctaccatcagtctctcaggatttggaggctt 532 |||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| || Sbjct: 505 tgaatttaaccccttggctgctaaagcagctaccatcagtctctctgcatttggaggttt 564 Query: 533 tttcagcttcggtgatttctcaaacaagcgcaat 566 ||||||||| |||||||||||||| ||||||||| Sbjct: 565 tttcagctttggtgatttctcaaataagcgcaat 598
>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 ||||||||||||||||||||||||| Sbjct: 146 gatgcccattcctgaggaacatcaa 170
>emb|CT830042.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN080G16, full insert sequence Length = 1436 Score = 48.1 bits (24), Expect = 0.088 Identities = 30/32 (93%) Strand = Plus / Plus Query: 336 ggagccaagggtccaattttcgaagacggacc 367 |||||||||||||||||||| || |||||||| Sbjct: 235 ggagccaagggtccaatttttgaggacggacc 266 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 161 gatgcccattcctgagaaacatcaa 185 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 877 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 929
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.088 Identities = 30/32 (93%) Strand = Plus / Minus Query: 336 ggagccaagggtccaattttcgaagacggacc 367 |||||||||||||||||||| || |||||||| Sbjct: 877616 ggagccaagggtccaatttttgaggacggacc 877585 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 876536 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 876484 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 877774 gatgcccattcctgagaaacatcaa 877750
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 48.1 bits (24), Expect = 0.088 Identities = 30/32 (93%) Strand = Plus / Minus Query: 336 ggagccaagggtccaattttcgaagacggacc 367 |||||||||||||||||||| || |||||||| Sbjct: 58511 ggagccaagggtccaatttttgaggacggacc 58480 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 57431 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 57379 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 58669 gatgcccattcctgagaaacatcaa 58645
>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full insert sequence Length = 3418 Score = 48.1 bits (24), Expect = 0.088 Identities = 30/32 (93%) Strand = Plus / Plus Query: 336 ggagccaagggtccaattttcgaagacggacc 367 |||||||||||||||||||| || |||||||| Sbjct: 1827 ggagccaagggtccaatttttgaggacggacc 1858 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 1669 gatgcccattcctgagaaacatcaa 1693 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 2907 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 2959
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 48.1 bits (24), Expect = 0.088 Identities = 30/32 (93%) Strand = Plus / Minus Query: 336 ggagccaagggtccaattttcgaagacggacc 367 |||||||||||||||||||| || |||||||| Sbjct: 9704 ggagccaagggtccaatttttgaggacggacc 9673 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 8624 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 8572 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 9862 gatgcccattcctgagaaacatcaa 9838
>gb|AY107177.1| Zea mays PCO111128 mRNA sequence Length = 539 Score = 46.1 bits (23), Expect = 0.35 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1042 agacaattggttcaagagctgagcgtatcaggttgaagagggc 1084 ||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 17 agacaatcgggtcaagagctgaacgtatcagactgaagagggc 59
>ref|NM_001065467.1| Oryza sativa (japonica cultivar-group) Os07g0159500 (Os07g0159500) mRNA, complete cds Length = 1698 Score = 44.1 bits (22), Expect = 1.4 Identities = 46/54 (85%) Strand = Plus / Plus Query: 929 gcagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 |||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 1120 gcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaa 1173 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 405 gatgcccattcctgagaaacatcaa 429
>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence Length = 154037 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 caaggaattgaacgatgcccat 267 |||||||||||||||||||||| Sbjct: 100181 caaggaattgaacgatgcccat 100202
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.4 Identities = 46/54 (85%) Strand = Plus / Minus Query: 929 gcagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 |||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 3216072 gcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaa 3216019 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 3217264 gatgcccattcctgagaaacatcaa 3217240
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 44.1 bits (22), Expect = 1.4 Identities = 46/54 (85%) Strand = Plus / Minus Query: 929 gcagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 |||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 131062 gcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaa 131009 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 132254 gatgcccattcctgagaaacatcaa 132230
>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full insert sequence Length = 1699 Score = 44.1 bits (22), Expect = 1.4 Identities = 46/54 (85%) Strand = Plus / Plus Query: 929 gcagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 |||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 1121 gcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaa 1174 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 406 gatgcccattcctgagaaacatcaa 430
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 44.1 bits (22), Expect = 1.4 Identities = 46/54 (85%) Strand = Plus / Minus Query: 929 gcagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 |||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 25765 gcagtggtttgcagctgtccatgccgctgttccattcatcggaatgctgaggaa 25712 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 gatgcccattcctgaggaacatcaa 283 |||||||||||||||| |||||||| Sbjct: 26957 gatgcccattcctgagaaacatcaa 26933
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ctgcccgcccgcctcgcctcc 119 ||||||||||||||||||||| Sbjct: 3634909 ctgcccgcccgcctcgcctcc 3634929
>emb|CR855213.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101P20, complete sequence Length = 96688 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cgcccgcctcgcctcctcgtc 124 ||||||||||||||||||||| Sbjct: 47459 cgcccgcctcgcctcctcgtc 47479
>ref|NM_001063151.1| Oryza sativa (japonica cultivar-group) Os06g0115800 (Os06g0115800) mRNA, partial cds Length = 1116 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 529 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 581
>gb|AC187106.2| Gallus gallus BAC clone CH261-148O18 from chromosome z, complete sequence Length = 184475 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gtctgcctcctcccctcccgc 142 ||||||||||||||||||||| Sbjct: 147068 gtctgcctcctcccctcccgc 147088
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 tgcccgcccgcctcgcctcctcgtc 124 ||||||||||| ||||||||||||| Sbjct: 61159 tgcccgcccgcttcgcctcctcgtc 61183
>gb|BT017396.1| Zea mays clone EL01N0328C04.c mRNA sequence Length = 1249 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 gatgcccattcctgaggaacatcaa 283 ||||||||||||||||||| ||||| Sbjct: 877 gatgcccattcctgaggaatatcaa 901
>gb|U97551.1| Caenorhabditis elegans cosmid T01B10, complete sequence Length = 33745 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1393 gtgcagtcaataaattttaccatgt 1417 ||||| ||||||||||||||||||| Sbjct: 4576 gtgcaatcaataaattttaccatgt 4600
>gb|BC073187.1| Xenopus laevis MGC80422 protein, mRNA (cDNA clone MGC:80422 IMAGE:5155242), complete cds Length = 2443 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 729 ctgctgacacccccagctggt 749 ||||||||||||||||||||| Sbjct: 1564 ctgctgacacccccagctggt 1544
>gb|AC146239.3| Pan troglodytes BAC clone CH251-176K11 from Y, complete sequence Length = 180132 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||||||||||||||| ||||| Sbjct: 49132 cctcctcgtctgcctcctctcctcc 49108
>gb|AC146452.3| Pan troglodytes BAC clone CH251-483N3 from Y, complete sequence Length = 215209 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||||||||||||||| ||||| Sbjct: 204063 cctcctcgtctgcctcctctcctcc 204039
>gb|AF126011.1| Antheraea mylitta mariner transposon Anm3.2 transposase pseudogene, complete sequence Length = 1589 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 acatggattcctttttccaaa 198 ||||||||||||||||||||| Sbjct: 163 acatggattcctttttccaaa 183
>gb|AC078794.13| Homo sapiens 3 BAC RP11-67L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154667 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 caaagcccactcctgaattta 480 ||||||||||||||||||||| Sbjct: 33734 caaagcccactcctgaattta 33714
>dbj|AK044782.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930104J06 product:B-cell CLL/lymphoma 7A, full insert sequence Length = 3754 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 cagtctctcaggatttggagg 529 ||||||||||||||||||||| Sbjct: 704 cagtctctcaggatttggagg 724
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 tgcccgcccgcctcgcctcctcgtc 124 ||||||||||| ||||||||||||| Sbjct: 4395173 tgcccgcccgcttcgcctcctcgtc 4395197 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cgcccgcctcgcctcctcgtc 124 ||||||||||||||||||||| Sbjct: 25373834 cgcccgcctcgcctcctcgtc 25373854
>emb|AL078646.29|HSJ709L21 Human DNA sequence from clone RP4-709L21 on chromosome 1q42.13-43 Contains part of the GALNT2 gene for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2), complete sequence Length = 129413 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||| ||||||||||||||||| Sbjct: 71582 cctcctcctctgcctcctcccctcc 71606
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cgcccgcctcgcctcctcgtc 124 ||||||||||||||||||||| Sbjct: 100393 cgcccgcctcgcctcctcgtc 100413
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 tgcccgcccgcctcgcctcctcgtc 124 ||||||||||| ||||||||||||| Sbjct: 22905 tgcccgcccgcttcgcctcctcgtc 22929
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ccttggcagccaaagcagcta 504 ||||||||||||||||||||| Sbjct: 1046947 ccttggcagccaaagcagcta 1046967
>gb|AC007244.2|AC007244 Homo sapiens BAC clone RP11-207L19 from Y, complete sequence Length = 184977 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||||||||||||||| ||||| Sbjct: 119139 cctcctcgtctgcctcctctcctcc 119163
>dbj|BS000593.2| Pan troglodytes chromosome Y clone:PTB-006C19, complete sequences Length = 108944 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||||||||||||||| ||||| Sbjct: 43760 cctcctcgtctgcctcctctcctcc 43784
>dbj|BS000554.1| Pan troglodytes chromosome Y clone:PTB-334B21, complete sequences Length = 129327 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 cctcctcgtctgcctcctcccctcc 139 ||||||||||||||||||| ||||| Sbjct: 124909 cctcctcgtctgcctcctctcctcc 124933
>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full insert sequence Length = 1116 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 529 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 581
>emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 in linkage group 17, complete sequence Length = 182325 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cctcctcgtctgcctcctccc 135 ||||||||||||||||||||| Sbjct: 43921 cctcctcgtctgcctcctccc 43941
>gb|AF192975.1|AF192975 Oryza sativa unknown gene Length = 673 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 930 cagtggtttgcggcggtccatgctgcagtgcctttcatagggatgctgaggaa 982 ||||||||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 75 cagtggtttgcagctgtccatgccgctgttccattcattggaatgctgaggaa 127
>gb|AC148120.4| Saimiri boliviensis boliviensis clone CH254-165N18, complete sequence Length = 199625 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 918 aagttttcagtgcagtggttt 938 ||||||||||||||||||||| Sbjct: 131920 aagttttcagtgcagtggttt 131940
>emb|AL606977.28| Mouse DNA sequence from clone RP23-284L6 on chromosome 4, complete sequence Length = 199429 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 ctcctcgtctgcctcctcccctccc 140 |||||| |||||||||||||||||| Sbjct: 77194 ctcctcctctgcctcctcccctccc 77218 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 239,082,079 Number of extensions: 13079656 Number of successful extensions: 241105 Number of sequences better than 10.0: 46 Number of HSP's gapped: 241087 Number of HSP's successfully gapped: 71 Length of query: 1431 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1408 Effective length of database: 18,503,978,556 Effective search space: 26053601806848 Effective search space used: 26053601806848 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)