>Q99KW3:TARA_MOUSE TRIO and F-actin-binding protein - Mus musculus (Mouse)|
          Length = 2014
 Score = 35.8 bits (81), Expect = 0.24
 Identities = 22/71 (30%), Positives = 30/71 (42%)
 Frame = -1

Query: 576 TPIPGK*QTNTTSNASNLPGTASTTXXXXXXXXPSKWKHLTWSCSSLIPPSTYSDSCAAT 397
           TP   +    T+  + N P T ST          SKW+HL  +C+    P T+S  C   
Sbjct: 490 TPCAQRDNPRTSCTSQNTPRTPSTQADKTTASC-SKWEHLRSACTQRDNPRTFSQGCTQK 548

Query: 396 RSSQGDSERRA 364
            +    S RRA
Sbjct: 549 DNPGPPSPRRA 559

>P29029:CHIT_YEAST Endochitinase precursor - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 562

 Score = 35.4 bits (80), Expect = 0.32
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
 Frame = -1

Query: 630 LAPLQHLLASDLSSAAGETPIPGK*QTNTTSNASNLPGTASTTXXXXXXXXPSKWKHLTW 451
           +  ++  L+S ++SAA  TP     QT TTS  S+ P   + T         S    L  
Sbjct: 402 ITSMKTTLSSQITSAALVTP-----QTTTTSIVSSAPIQTAITSTLSPATKSSSVVSLQT 456

Query: 450 SCSSLIPPSTYSDSCAATR--SSQGDSERRALTKD 352
           + +S + P+T S S  +T   S+  DS  R L K+
Sbjct: 457 ATTSTLSPTTTSTSSGSTSSGSTSSDSTARTLAKE 491

>Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 - Mus musculus (Mouse)|
          Length = 493

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 22/63 (34%), Positives = 25/63 (39%)
 Frame = -3

Query: 640 DDDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEPPRHGLHHAAPLPPSPSFQMEA 461
           DD P     P+G RP   R   P P     +  V     PR GL   AP PP P  +   
Sbjct: 253 DDKPPPPPPPVGNRPSMHREAVPPPPSQTSKPPVP--STPRPGLGSQAPPPPPPPSRPGP 310

Query: 460 PHL 452
           P L
Sbjct: 311 PPL 313

>Q5JRC9:FA47A_HUMAN Protein FAM47A - Homo sapiens (Human)|
          Length = 778

 Score = 25.8 bits (55), Expect(2) = 2.3
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 574 PHPGEVADEHHVERVEPPRHGLHHAAPLPP 485
           P P E    H   R EPP  G+ H  P PP
Sbjct: 225 PEPPETGVSHL--RPEPPETGVSHIRPGPP 252



 Score = 25.4 bits (54), Expect(2) = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 767 PPFQTCSHLQPSPGKTYWASPRTQCPDS 684
           PP    SHL P P KT  +S R + P++
Sbjct: 203 PPETGVSHLSPEPPKTPVSSLRPEPPET 230

>P28477:POLR_TYMVC RNA replicase polyprotein - Turnip yellow mosaic virus (isolate|
           TYMC)
          Length = 1844

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -3

Query: 658 PTLIQEDDDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEP--PRHGLHHAAPLPP 485
           P L  E + P  F   L   P       P P  +  +   + V+P    H LHH+ P PP
Sbjct: 663 PVLFPEINSPRRFPPQLPATPDLEPAHTPPPLSIPHQDPTDSVDPLMGSHLLHHSLPAPP 722

Query: 484 S---PSFQM 467
           +   PS Q+
Sbjct: 723 THPLPSSQL 731

>Q8TFG9:YL61_SCHPO Uncharacterized serine/threonine-rich protein PB15E9.01c precursor|
           - Schizosaccharomyces pombe (Fission yeast)
          Length = 943

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 43/198 (21%), Positives = 79/198 (39%)
 Frame = -1

Query: 813 WNSRTARYSDESSTNSAISNLLPSAAFSREDLLGKSANTMSGFSLRCCARLCLP*SKKMT 634
           +N+ +A  S  +S+++A S+L  S++ +       ++ + +  SL   +      +   T
Sbjct: 65  YNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSST 124

Query: 633 TLAPLQHLLASDLSSAAGETPIPGK*QTNTTSNASNLPGTASTTXXXXXXXXPSKWKHLT 454
           T + L     +  S A+          ++TTS++     T STT         S     T
Sbjct: 125 TSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSST 184

Query: 453 WSCSSLIPPSTYSDSCAATRSSQGDSERRALTKDGVGVTASTRDAGESAPAASARGRWEP 274
            + +S    S  S S  +T S+         T   +  TA++  A  S+ A+S+      
Sbjct: 185 AASNSATSSSLASSSLNSTTSA-------TATSSSLSSTAASNSATSSSLASSSLNSTTS 237

Query: 273 AAFRKDQSFSMISSMATP 220
           A        S +SS +TP
Sbjct: 238 ATATSSSISSTVSS-STP 254

>P10687:PLCB1_RAT 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 1 -|
           Rattus norvegicus (Rat)
          Length = 1216

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 616 APLGERPKQRRRRDPHPGEVADEHHVE-RVEPPRHGLHHAAPLPPSPSFQMEAPH 455
           A L    ++  +++  PGE + E   E R  P  +G++H A L P P  Q  APH
Sbjct: 828 AALTLEDEEEVKKEADPGETSSEAPSETRTTPAENGVNHTATLAPKPPSQ--APH 880

>Q9Z1B3:PLCB1_MOUSE 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 1 -|
           Mus musculus (Mouse)
          Length = 1216

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 616 APLGERPKQRRRRDPHPGEVADEHHVE-RVEPPRHGLHHAAPLPPSPSFQMEAPH 455
           A L    ++  +++  PGE + E   E R  P  +G++H A L P P  Q  APH
Sbjct: 828 AALTLEDEEEVKKEADPGETSSEAPSETRTTPAENGVNHTASLAPKPPSQ--APH 880

>Q6IN36:WIPF1_RAT WAS/WASL-interacting protein family member 1 - Rattus norvegicus|
           (Rat)
          Length = 487

 Score = 31.6 bits (70), Expect = 4.6
 Identities = 20/55 (36%), Positives = 22/55 (40%)
 Frame = -3

Query: 640 DDDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEPPRHGLHHAAPLPPSPS 476
           DD P     P+G RP   R   P P     +  V     PR G    AP PP PS
Sbjct: 248 DDKPPPPPPPVGNRPSMHREAVPPPPSQNSKPPVP--STPRPGAGSQAPPPPPPS 300

>Q8CHI8:EP400_MOUSE E1A-binding protein p400 - Mus musculus (Mouse)|
          Length = 3072

 Score = 31.6 bits (70), Expect = 4.6
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
 Frame = -1

Query: 627 APLQHLLASDLSSAAG---ETPIPGK*QTNTTSNASNLPGTASTTXXXXXXXXPSKWKHL 457
           APL   L +  S  A      P+PGK Q  T+  +S     AST           +    
Sbjct: 639 APLPSQLPAPSSQPAQPALHVPMPGKAQMQTSQLSSQTQTVASTRPPLDSAQPCQRSLPT 698

Query: 456 TWSCSSLIPPSTYSDSCAATRSSQGDSERRALTKDGVGVTASTRDAGESAP 304
           + S SSL+P S      +  RSS  +    A  K    +T+ +     SAP
Sbjct: 699 SSSSSSLVPVSGSGPGPSPARSSPVNRPSSATNKALSPITSRSPGVAVSAP 749

>O43149:ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 - Homo|
           sapiens (Human)
          Length = 2961

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +2

Query: 248 KDWSFLNAAGSHLPRALAAGALSPASRVLAVTPTPSFVSALLSESPCELLVAAH 409
           +DW+ ++  G+     +AA AL PA+ +L         +ALL   PCE LV+ H
Sbjct: 25  QDWAAVS--GTTPGPGVAAPALPPAAALLEPARLREAAAALLPTPPCESLVSRH 76

>Q9JIB3:BIR1G_MOUSE Baculoviral IAP repeat-containing protein 1g - Mus musculus (Mouse)|
          Length = 1402

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 766 RHFKLAPICSLLQGRPTGQVREHNVRI 686
           RH KL P C  LQG+  G + ++++R+
Sbjct: 116 RHKKLRPECEFLQGKDVGNIGKYDIRV 142

>Q9JIB6:BIR1F_MOUSE Baculoviral IAP repeat-containing protein 1f - Mus musculus (Mouse)|
          Length = 1403

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 766 RHFKLAPICSLLQGRPTGQVREHNVRI 686
           RH KL P C  LQG+  G + ++++R+
Sbjct: 116 RHKKLRPECEFLQGKDVGNIGKYDIRV 142

>Q9R016:BIR1E_MOUSE Baculoviral IAP repeat-containing protein 1e - Mus musculus (Mouse)|
          Length = 1403

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 766 RHFKLAPICSLLQGRPTGQVREHNVRI 686
           RH KL P C  LQG+  G + ++++R+
Sbjct: 116 RHKKLRPECEFLQGKDVGNIGKYDIRV 142

>Q9QWK5:BIR1A_MOUSE Baculoviral IAP repeat-containing protein 1a - Mus musculus (Mouse)|
          Length = 1403

 Score = 31.2 bits (69), Expect = 6.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 766 RHFKLAPICSLLQGRPTGQVREHNVRI 686
           RH KL P C  LQG+  G + ++++R+
Sbjct: 116 RHKKLRPECEFLQGKDVGNIGKYDIRV 142

>Q69ZB8:ZCHC2_MOUSE Zinc finger CCHC domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 1168

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = -3

Query: 637 DDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEPPRHGLHHAAPLPPSPSFQMEAP 458
           ++P A A P G +   RRRRD  P             PP  GL    P PPSP   +E P
Sbjct: 23  EEPEADARP-GAKAPLRRRRDCRP------------PPPPTGLPRGPPPPPSPPRGLEPP 69

>O75445:USH2A_HUMAN Usherin precursor - Homo sapiens (Human)|
          Length = 5202

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 3/126 (2%)
 Frame = +3

Query: 468  IWKEGEGGRGAAWWRPCRGGSTRSTWCSSATSPXXXXXXXXXXXXXXXXAA---KAQGSS 638
            +W     G+  + W          TWC +  +P                A     A G  
Sbjct: 4712 VWAVNSAGKAPSSW----------TWCRTGPAPPEGLRAPTFHVISSTQAVVNISAPGKP 4761

Query: 639  SSWIKVGRAWRNTAGRIRTLCSRTCPVGLPWRRLQMGASLKWRSSLTIRRCTLPFCCSKG 818
            +  + + R + ++A    T+ S     G+  ++   G       S+ +  CT   CCSKG
Sbjct: 4762 NGIVSLYRLFSSSAHGAETVLSE----GMATQQTLHGLQAFTNYSIGVEACTCFNCCSKG 4817

Query: 819  ETIFVR 836
             T  +R
Sbjct: 4818 PTAELR 4823

>O83803:SYR_TREPA Arginyl-tRNA synthetase - Treponema pallidum|
          Length = 589

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 694 VRILPAVLRQALPTLIQEDDDPCAFAAPLGERP 596
           VR  PA L Q L TL++ED   CA+  P    P
Sbjct: 56  VRRSPAQLAQQLCTLLEEDTSMCAYGTPQARGP 88

>Q9H254:SPTN4_HUMAN Spectrin beta chain, brain 3 - Homo sapiens (Human)|
          Length = 2564

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 34/106 (32%), Positives = 41/106 (38%)
 Frame = -3

Query: 781  IVNELRHFKLAPICSLLQGRPTGQVREHNVRILPAVLRQALPTLIQEDDDPCAFAAPLGE 602
            IV +L+  +  P   L  G    Q RE     LP  L   LP      D P A      +
Sbjct: 2326 IVEQLQEKEAGP--GLPAGPSLPQPRELPPGRLPNGLE--LPERTPRPDRPRA-----RD 2376

Query: 601  RPKQRRRRDPHPGEVADEHHVERVEPPRHGLHHAAPLPPSPSFQME 464
            RPK RRR  P  G         R  P + G   A P PP+ + Q E
Sbjct: 2377 RPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPTHTVQHE 2422

>O82427:SMT2_ORYSJ 24-methylenesterol C-methyltransferase 2 - Oryza sativa subsp.|
           japonica (Rice)
          Length = 363

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 714 PVGLPW-RRLQMGASLKWRSSLTIRRCTLPFCCSKG 818
           P  LPW  RL+MG    WR+SL +R  T+     KG
Sbjct: 289 PPALPWWTRLKMGRIAYWRNSLVVRVLTMLRIAPKG 324

>P20128:POLR_TYMVA RNA replicase polyprotein - Turnip yellow mosaic virus (isolate|
           Australia)
          Length = 1844

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
 Frame = -3

Query: 658 PTLIQEDDDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEP--PRHGLHHAAPLPP 485
           P L  E + P  F+  L   P     R   P   + +   +  +P    H LHH+ P PP
Sbjct: 663 PVLFPEINSPHRFSPKLPTTPDFEPTRTSPPPSTSHQDSTDPADPLMGSHLLHHSLPAPP 722

Query: 484 SPSFQMEAPHLVVLLLDPS 428
           +   Q        L  DP+
Sbjct: 723 THPLQSSQLLPAPLTNDPT 741

>P10358:POLR_TYMV RNA replicase polyprotein - Turnip yellow mosaic virus|
          Length = 1844

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
 Frame = -3

Query: 658 PTLIQEDDDPCAFAAPLGERPKQRRRRDPHPGEVADEHHVERVEP--PRHGLHHAAPLPP 485
           P L  E + P  F   L   P       P P  +  +   +  +P    H LHH+ P PP
Sbjct: 663 PVLFPEINSPRRFPPQLPATPDLEPAHTPPPLSIPHQDPTDSADPLMGSHLLHHSLPAPP 722

Query: 484 S---PSFQM 467
           +   PS Q+
Sbjct: 723 THPLPSSQL 731

>Q4WYS7:NNT1_ASPFU Putative nicotinamide N-methyltransferase - Aspergillus fumigatus|
           (Sartorya fumigata)
          Length = 259

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 25/83 (30%), Positives = 37/83 (44%)
 Frame = +2

Query: 620 KGARVVIFLDQGRQSLAQHRRENPDIVFADLPSRSSLEKAADGSKFEMAEFVDDSSLYLA 799
           KGAR V+  D     L ++ R N  +  A +PS SSL  A     ++  + V+  + YL 
Sbjct: 96  KGARTVVMTDYPDPDLVENMRYNASLSAAIIPSSSSLHVAG----YKWGDPVEPLTAYLP 151

Query: 800 VLLFQG*NHFCKTDYVDWYYLHQ 868
               +G N F      D  Y +Q
Sbjct: 152 ----EGSNSFDLLIMADVVYSYQ 170

>P97367:MEIS2_MOUSE Homeobox protein Meis2 - Mus musculus (Mouse)|
          Length = 477

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 568 PGEVADEHHVERVEPPRHGLHHAAPLPPSPSFQMEAPHLVVLLLDPSQHVQRLVRR 401
           P  +  + H  R  PP H L+H  PL  +  +   APH  V+       V   ++R
Sbjct: 20  PASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKR 75

>O14770:MEIS2_HUMAN Homeobox protein Meis2 - Homo sapiens (Human)|
          Length = 477

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 568 PGEVADEHHVERVEPPRHGLHHAAPLPPSPSFQMEAPHLVVLLLDPSQHVQRLVRR 401
           P  +  + H  R  PP H L+H  PL  +  +   APH  V+       V   ++R
Sbjct: 20  PASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKR 75

>Q9QXV9:SPY1_MOUSE Sprouty homolog 1 - Mus musculus (Mouse)|
          Length = 313

 Score = 30.8 bits (68), Expect = 7.8
 Identities = 28/87 (32%), Positives = 39/87 (44%)
 Frame = -1

Query: 819 HPWNSRTARYSDESSTNSAISNLLPSAAFSREDLLGKSANTMSGFSLRCCARLCLP*SKK 640
           HP N+R +  S  +ST SA S+   S+  S + LLG+S  T      R         S +
Sbjct: 96  HPGNARGSVLSRSTSTGSAASSGSSSSVSSEQGLLGRSPPTRPIPGHR---------SDR 146

Query: 639 MTTLAPLQHLLASDLSSAAGETPIPGK 559
           +    P Q LL  DL ++  E P   K
Sbjct: 147 VIRTQPKQ-LLVEDLKASLKEDPTQHK 172


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 120,960,340
Number of extensions: 2523546
Number of successful extensions: 9765
Number of sequences better than 10.0: 26
Number of HSP's gapped: 9720
Number of HSP's successfully gapped: 27
Length of query: 302
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 189
Effective length of database: 69,691,104
Effective search space: 13171618656
Effective search space used: 13171618656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)