ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34k08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT835188.1| Oryza sativa (indica cultivar-group) cDNA clone:... 214 4e-52
2ref|NM_001055976.1| Oryza sativa (japonica cultivar-group) Os03g... 214 4e-52
3gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 214 4e-52
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 214 4e-52
5emb|CT835226.1| Oryza sativa (indica cultivar-group) cDNA clone:... 206 1e-49
6ref|XM_001228420.1| Chaetomium globosum CBS 148.51 hypothetical ... 46 0.22
7ref|NM_001066207.1| Oryza sativa (japonica cultivar-group) Os07g... 46 0.22
8ref|NM_001059774.1| Oryza sativa (japonica cultivar-group) Os04g... 46 0.22
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.22
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.22
11dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.22
12dbj|AK105505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.22
13dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.22
14emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.22
15gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CB... 46 0.22
16dbj|AK241571.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 44 0.86
17ref|NM_001073344.1| Oryza sativa (japonica cultivar-group) Os12g... 44 0.86
18gb|AY785866.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 H... 44 0.86
19gb|AY785865.1| Hordeum vulgare subsp. vulgare cultivar Strider H... 44 0.86
20gb|AY785863.1| Hordeum vulgare subsp. vulgare cultivar Morex HvC... 44 0.86
21gb|AY785864.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo H... 44 0.86
22gb|AC108784.12| Mus musculus chromosome 8, clone RP24-181O5, com... 44 0.86
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.86
24gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.86
25gb|AF326485.1|AF326485 Zea mays NOD26-like membrane integral pro... 44 0.86
26gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complet... 44 0.86
27dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone... 44 0.86
28emb|AL359400.4|CNS05TEW Human chromosome 14 DNA sequence BAC R-1... 44 0.86
29gb|DQ206511.1| Priapulus caudatus isolate TOA62 ATPase alpha-sub... 44 0.86
30emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.86
31emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.86
32ref|NM_205476.1| Gallus gallus Na,K-ATPase alpha-2-subunit (LOC3... 44 0.86
33emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromo... 42 3.4
34emb|CT832960.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 3.4
35ref|NM_001070307.1| Oryza sativa (japonica cultivar-group) Os09g... 42 3.4
36ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g... 42 3.4
37ref|NM_001059412.1| Oryza sativa (japonica cultivar-group) Os04g... 42 3.4
38ref|NM_001059411.1| Oryza sativa (japonica cultivar-group) Os04g... 42 3.4
39ref|NM_001054088.1| Oryza sativa (japonica cultivar-group) Os02g... 42 3.4
40emb|AM279695.1| Streptomyces ambofaciens DSM 40697 right termina... 42 3.4
41emb|AM279694.1| Streptomyces ambofaciens DSM 40697 left terminal... 42 3.4
42emb|AM384990.1| Enterobacter sakazakii clone BAC 9E10, containin... 42 3.4
43emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 3.4
44gb|DQ679837.1| Lobesia botrana actin mRNA, partial cds 42 3.4
45emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 42 3.4
46emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 42 3.4
47emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 3.4
48gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcom... 42 3.4
49gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome... 42 3.4
50gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 3.4
51gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 3.4
52gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, comp... 42 3.4
53gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome... 42 3.4
54gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosom... 42 3.4
55gb|AY487307.1| Ficus carica endo-glucanase 2 mRNA, partial cds 42 3.4
56gb|AC126447.3| Mus musculus BAC clone RP23-352G19 from chromosom... 42 3.4
57gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 42 3.4
58gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 42 3.4
59dbj|AK126419.1| Homo sapiens cDNA FLJ44455 fis, clone UTERU20236... 42 3.4
60gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, com... 42 3.4
61gb|AF434716.1| Frankliniella occidentalis actin gene, partial cds 42 3.4
62tpg|BK000774.1| TPA_inf: Oryza sativa transposon Rim2-M184, comp... 42 3.4
63tpg|BK000800.1| TPA_inf: Oryza sativa transposon Rim2-M211, comp... 42 3.4
64gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 42 3.4
65dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
66dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
67dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
68dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
69dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
70dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
71emb|AL157884.9| Human DNA sequence from clone RP11-462B18 on chr... 42 3.4
72emb|AL078612.8|HSDJ65P5 Human DNA sequence from clone RP1-65P5 o... 42 3.4
73gb|U86888.1|MCU86888 Molluscum contagiosum virus subtype 1 clone... 42 3.4
74dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
75emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 42 3.4
76emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 3.4
77dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
78dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
79dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
80dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
81emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 i... 42 3.4
82dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
83dbj|AK106786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
84dbj|AK100026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
85emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 42 3.4
86dbj|AK072763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
87dbj|AK069010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
88dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
89dbj|AK064785.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
90dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 3.4
91gb|AE005015.1| Halobacterium sp. NRC-1 section 46 of 170 of the ... 42 3.4
92emb|AL671400.5| Mouse DNA sequence from clone RP23-109C6 on chro... 42 3.4
93ref|XM_310891.2| Anopheles gambiae str. PEST ENSANGP00000012381 ... 42 3.4
94dbj|AP003894.2| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
95gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 3.4
96emb|CR931784.7| Zebrafish DNA sequence from clone DKEY-237H12 in... 42 3.4
97emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4,... 42 3.4
98gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipie... 42 3.4
99gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipie... 42 3.4
100gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipie... 42 3.4

>emb|CT835188.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117I14, full
           insert sequence
          Length = 1195
 Score =  214 bits (108), Expect = 4e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 287 ccccgcgcgctcgccgcgggggcgctctcgcccgcgtcgcgtgtgctggccgtgacgccc 346
           |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 314 ccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgaccccc 373

                                                                       
Query: 347 accccgtccttcgtgagcgccctcctctccgagtccccctgcgagctcctggtggcggcg 406
            | ||||||||||||  |||||||||||| | |  ||||||||||||||||||||| |||
Sbjct: 374 gcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggccgcg 433

                                                                       
Query: 407 cacgagtcgctgtacgtgctgggagggatcaaggaggagcacgaccaggtgaggtgcttc 466
           |||||||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||
Sbjct: 434 cacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtgcttc 493

                   
Query: 467 catttgga 474
           || |||||
Sbjct: 494 cacttgga 501



 Score =  163 bits (82), Expect = 1e-36
 Identities = 157/182 (86%)
 Strand = Plus / Plus

                                                                       
Query: 503 gtggtggaggccgtgccggggaggttcgacgcgttcgacgtggtgttcgtctgctacttc 562
           |||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 530 gtggtggagggcgtgccggagaggttcgacgcgttcgacgccgtgttcgtctgctacttc 589

                                                                       
Query: 563 cccgggatgggggtctcgccggcggcgctgcttaggtcgctcgccaagaggtgctgcaaa 622
           ||||||||||| |||||| | || |||||||| | |||||| |||||||| |||| ||||
Sbjct: 590 cccgggatgggtgtctcggccgccgcgctgctcaagtcgctggccaagagatgctccaaa 649

                                                                       
Query: 623 ggcgcaagggtcgtcatcttcttggatcaaggtaggcagagcctggcgcaacaccgcagg 682
           || | ||| || |||||||| |||||||||||  |||| ||  ||| |||||| ||||||
Sbjct: 650 ggtggaagagttgtcatctttttggatcaaggacggcaaagtttggagcaacatcgcagg 709

             
Query: 683 ga 684
           ||
Sbjct: 710 ga 711



 Score = 48.1 bits (24), Expect = 0.055
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 51 ccatggccgccgcctccacctccctctc 78
          |||||||| |||||||||||||||||||
Sbjct: 54 ccatggcctccgcctccacctccctctc 81



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>ref|NM_001055976.1| Oryza sativa (japonica cultivar-group) Os03g0226700 (Os03g0226700)
           mRNA, complete cds
          Length = 789

 Score =  214 bits (108), Expect = 4e-52
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 287 ccccgcgcgctcgccgcgggggcgctctcgcccgcgtcgcgtgtgctggccgtgacgccc 346
           |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 259 ccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgaccccc 318

                                                                       
Query: 347 accccgtccttcgtgagcgccctcctctccgagtccccctgcgagctcctggtggcggcg 406
            | ||||||||||||  |||||||||||| | |  ||||||||||||||||||||| |||
Sbjct: 319 gcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggccgcg 378

                                                                       
Query: 407 cacgagtcgctgtacgtgctgggagggatcaaggaggagcacgaccaggtgaggtgcttc 466
           |||||||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||
Sbjct: 379 cacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtgcttc 438

                   
Query: 467 catttgga 474
           || |||||
Sbjct: 439 cacttgga 446



 Score =  163 bits (82), Expect = 1e-36
 Identities = 157/182 (86%)
 Strand = Plus / Plus

                                                                       
Query: 503 gtggtggaggccgtgccggggaggttcgacgcgttcgacgtggtgttcgtctgctacttc 562
           |||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 475 gtggtggagggcgtgccggagaggttcgacgcgttcgacgccgtgttcgtctgctacttc 534

                                                                       
Query: 563 cccgggatgggggtctcgccggcggcgctgcttaggtcgctcgccaagaggtgctgcaaa 622
           ||||||||||| |||||| | || |||||||| | |||||| |||||||| |||| ||||
Sbjct: 535 cccgggatgggtgtctcggccgccgcgctgctcaagtcgctggccaagagatgctccaaa 594

                                                                       
Query: 623 ggcgcaagggtcgtcatcttcttggatcaaggtaggcagagcctggcgcaacaccgcagg 682
           || | ||| || |||||||| |||||||||||  |||| ||  ||| |||||| ||||||
Sbjct: 595 ggtggaagagttgtcatctttttggatcaaggacggcaaagtttggagcaacatcgcagg 654

             
Query: 683 ga 684
           ||
Sbjct: 655 ga 656



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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
             complete sequence
          Length = 127946

 Score =  214 bits (108), Expect = 4e-52
 Identities = 168/188 (89%)
 Strand = Plus / Minus

                                                                         
Query: 287   ccccgcgcgctcgccgcgggggcgctctcgcccgcgtcgcgtgtgctggccgtgacgccc 346
             |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 10197 ccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgaccccc 10138

                                                                         
Query: 347   accccgtccttcgtgagcgccctcctctccgagtccccctgcgagctcctggtggcggcg 406
              | ||||||||||||  |||||||||||| | |  ||||||||||||||||||||| |||
Sbjct: 10137 gcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggccgcg 10078

                                                                         
Query: 407   cacgagtcgctgtacgtgctgggagggatcaaggaggagcacgaccaggtgaggtgcttc 466
             |||||||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||
Sbjct: 10077 cacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtgcttc 10018

                     
Query: 467   catttgga 474
             || |||||
Sbjct: 10017 cacttgga 10010



 Score =  139 bits (70), Expect = 2e-29
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                        
Query: 503  gtggtggaggccgtgccggggaggttcgacgcgttcgacgtggtgttcgtctgctacttc 562
            |||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 9981 gtggtggagggcgtgccggagaggttcgacgcgttcgacgccgtgttcgtctgctacttc 9922

                                                                        
Query: 563  cccgggatgggggtctcgccggcggcgctgcttaggtcgctcgccaagaggtgctgcaaa 622
            ||||||||||| |||||| | || |||||||| | |||||| |||||||| |||| ||||
Sbjct: 9921 cccgggatgggtgtctcggccgccgcgctgctcaagtcgctggccaagagatgctccaaa 9862

              
Query: 623  gg 624
            ||
Sbjct: 9861 gg 9860



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  214 bits (108), Expect = 4e-52
 Identities = 168/188 (89%)
 Strand = Plus / Minus

                                                                           
Query: 287     ccccgcgcgctcgccgcgggggcgctctcgcccgcgtcgcgtgtgctggccgtgacgccc 346
               |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 6623862 ccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgaccccc 6623803

                                                                           
Query: 347     accccgtccttcgtgagcgccctcctctccgagtccccctgcgagctcctggtggcggcg 406
                | ||||||||||||  |||||||||||| | |  ||||||||||||||||||||| |||
Sbjct: 6623802 gcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggccgcg 6623743

                                                                           
Query: 407     cacgagtcgctgtacgtgctgggagggatcaaggaggagcacgaccaggtgaggtgcttc 466
               |||||||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||
Sbjct: 6623742 cacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtgcttc 6623683

                       
Query: 467     catttgga 474
               || |||||
Sbjct: 6623682 cacttgga 6623675



 Score =  139 bits (70), Expect = 2e-29
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                           
Query: 503     gtggtggaggccgtgccggggaggttcgacgcgttcgacgtggtgttcgtctgctacttc 562
               |||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 6623646 gtggtggagggcgtgccggagaggttcgacgcgttcgacgccgtgttcgtctgctacttc 6623587

                                                                           
Query: 563     cccgggatgggggtctcgccggcggcgctgcttaggtcgctcgccaagaggtgctgcaaa 622
               ||||||||||| |||||| | || |||||||| | |||||| |||||||| |||| ||||
Sbjct: 6623586 cccgggatgggtgtctcggccgccgcgctgctcaagtcgctggccaagagatgctccaaa 6623527

                 
Query: 623     gg 624
               ||
Sbjct: 6623526 gg 6623525



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>emb|CT835226.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA039D12, full
           insert sequence
          Length = 946

 Score =  206 bits (104), Expect = 1e-49
 Identities = 167/188 (88%)
 Strand = Plus / Plus

                                                                       
Query: 287 ccccgcgcgctcgccgcgggggcgctctcgcccgcgtcgcgtgtgctggccgtgacgccc 346
           |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||
Sbjct: 313 ccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgaccccc 372

                                                                       
Query: 347 accccgtccttcgtgagcgccctcctctccgagtccccctgcgagctcctggtggcggcg 406
            | ||||||||||||  |||||||||||| | |  ||||||||||||||||||||| |||
Sbjct: 373 gcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggccgcg 432

                                                                       
Query: 407 cacgagtcgctgtacgtgctgggagggatcaaggaggagcacgaccaggtgaggtgcttc 466
           |||||||| ||||||||| |||  ||||||||||||| ||||||| ||||||||||||||
Sbjct: 433 cacgagtccctgtacgtgttggcggggatcaaggaggggcacgacgaggtgaggtgcttc 492

                   
Query: 467 catttgga 474
           || |||||
Sbjct: 493 cacttgga 500



 Score =  139 bits (70), Expect = 2e-29
 Identities = 109/122 (89%)
 Strand = Plus / Plus

                                                                       
Query: 503 gtggtggaggccgtgccggggaggttcgacgcgttcgacgtggtgttcgtctgctacttc 562
           |||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 529 gtggtggagggcgtgccggagaggttcgacgcgttcgacgccgtgttcgtctgctacttc 588

                                                                       
Query: 563 cccgggatgggggtctcgccggcggcgctgcttaggtcgctcgccaagaggtgctgcaaa 622
           ||||||||||| |||||| | || |||||||| | |||||| |||||||| |||| ||||
Sbjct: 589 cccgggatgggtgtctcggccgccgcgctgctcaagtcgctggccaagagatgctccaaa 648

             
Query: 623 gg 624
           ||
Sbjct: 649 gg 650



 Score = 48.1 bits (24), Expect = 0.055
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 51 ccatggccgccgcctccacctccctctc 78
          |||||||| |||||||||||||||||||
Sbjct: 53 ccatggcctccgcctccacctccctctc 80



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>ref|XM_001228420.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10494)
            mRNA, complete cds
          Length = 3873

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 60   ccgcctccacctccctctccctc 82
            |||||||||||||||||||||||
Sbjct: 3133 ccgcctccacctccctctccctc 3111



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>ref|NM_001066207.1| Oryza sativa (japonica cultivar-group) Os07g0490200
          (Os07g0490200) mRNA, complete cds
          Length = 3173

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 47 cccgccatggccgccgcctccacctcc 73
          ||||||||||||||||||||| |||||
Sbjct: 57 cccgccatggccgccgcctccgcctcc 31



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>ref|NM_001059774.1| Oryza sativa (japonica cultivar-group) Os04g0503200 (Os04g0503200)
           mRNA, partial cds
          Length = 1254

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 47  cccgccatggccgccgcctccacctcc 73
           ||||||||||||||||||||| |||||
Sbjct: 82  cccgccatggccgccgcctccgcctcc 108



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 47       cccgccatggccgccgcctccacctcc 73
                ||||||||||||||||||||| |||||
Sbjct: 18164473 cccgccatggccgccgcctccgcctcc 18164499



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 58       cgccgcctccacctccctctccctcgcct 86
                ||||||||||||| ||||||||| |||||
Sbjct: 24931177 cgccgcctccaccgccctctcccacgcct 24931149



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 47       cccgccatggccgccgcctccacctcc 73
                ||||||||||||||||||||| |||||
Sbjct: 25097842 cccgccatggccgccgcctccgcctcc 25097816



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 44      ccacccgccatggccgccgcc 64
               |||||||||||||||||||||
Sbjct: 2894079 ccacccgccatggccgccgcc 2894099



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 44       ccacccgccatggccgccgcc 64
                |||||||||||||||||||||
Sbjct: 21979457 ccacccgccatggccgccgcc 21979477



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>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0477A12
          Length = 138141

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 47    cccgccatggccgccgcctccacctcc 73
             ||||||||||||||||||||| |||||
Sbjct: 99779 cccgccatggccgccgcctccgcctcc 99805



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>dbj|AK105505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D11, full
           insert sequence
          Length = 1254

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 47  cccgccatggccgccgcctccacctcc 73
           ||||||||||||||||||||| |||||
Sbjct: 82  cccgccatggccgccgcctccgcctcc 108



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>dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E17,
          full insert sequence
          Length = 3174

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 47 cccgccatggccgccgcctccacctcc 73
          ||||||||||||||||||||| |||||
Sbjct: 58 cccgccatggccgccgcctccgcctcc 32



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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
             complete sequence
          Length = 150187

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 47    cccgccatggccgccgcctccacctcc 73
             ||||||||||||||||||||| |||||
Sbjct: 45269 cccgccatggccgccgcctccgcctcc 45243



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>gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CBT) mRNA,
          complete cds
          Length = 3134

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 47 cccgccatggccgccgcctccacctcc 73
          ||||||||||||||||||||| |||||
Sbjct: 34 cccgccatggccgccgcctccgcctcc 8



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>dbj|AK241571.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065179M03,
           full insert sequence
          Length = 949

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 47  cccgccatggccgccgcctccacctc 72
           |||||| |||||||||||||||||||
Sbjct: 98  cccgccgtggccgccgcctccacctc 123



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>ref|NM_001073344.1| Oryza sativa (japonica cultivar-group) Os12g0498500
          (Os12g0498500) mRNA, complete cds
          Length = 840

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 47 cccgccatggccgccgcctccacctc 72
          |||||| |||||||||||||||||||
Sbjct: 37 cccgccgtggccgccgcctccacctc 62



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>gb|AY785866.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF7 (CBF7) gene,
           complete cds
          Length = 898

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cctcgccgccgtccccgacggc 223
           ||||||||||||||||||||||
Sbjct: 126 cctcgccgccgtccccgacggc 147



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>gb|AY785865.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF7 (CBF7) gene,
           complete cds
          Length = 898

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cctcgccgccgtccccgacggc 223
           ||||||||||||||||||||||
Sbjct: 126 cctcgccgccgtccccgacggc 147



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>gb|AY785863.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF7 (CBF7) mRNA,
           complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cctcgccgccgtccccgacggc 223
           ||||||||||||||||||||||
Sbjct: 147 cctcgccgccgtccccgacggc 168



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>gb|AY785864.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF7 (CBF7) gene,
           complete cds
          Length = 898

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 202 cctcgccgccgtccccgacggc 223
           ||||||||||||||||||||||
Sbjct: 126 cctcgccgccgtccccgacggc 147



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>gb|AC108784.12| Mus musculus chromosome 8, clone RP24-181O5, complete sequence
          Length = 160801

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 63    cctccacctccctctccctcgccttctgtcctctcttc 100
             ||||| |||||||||||||  |||||| ||||||||||
Sbjct: 32969 cctccccctccctctccctgtccttctctcctctcttc 32932



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 47       cccgccatggccgccgcctccacctc 72
                |||||| |||||||||||||||||||
Sbjct: 18961474 cccgccgtggccgccgcctccacctc 18961449



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 193     cgccgcccccctcgccgccgtccccg 218
               |||||||| |||||||||||||||||
Sbjct: 2825089 cgccgccctcctcgccgccgtccccg 2825114



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>gb|AF326485.1|AF326485 Zea mays NOD26-like membrane integral protein ZmNIP2-2 mRNA,
           complete cds
          Length = 1387

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 49  cgccatggccgccgcctccacc 70
           ||||||||||||||||||||||
Sbjct: 107 cgccatggccgccgcctccacc 128



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>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence
          Length = 182507

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 744   atgggagcaagtttgaaatggcggag 769
             ||||||||||||||||||||| ||||
Sbjct: 18310 atgggagcaagtttgaaatgggggag 18335



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>dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT03D07, TM0180a,
             complete sequence
          Length = 76444

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 812   caagggtgaaaccatttttgta 833
             ||||||||||||||||||||||
Sbjct: 28710 caagggtgaaaccatttttgta 28689



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>emb|AL359400.4|CNS05TEW Human chromosome 14 DNA sequence BAC R-114L12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175668

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 10     tcttccactcccatcatcctcc 31
              ||||||||||||||||||||||
Sbjct: 102240 tcttccactcccatcatcctcc 102219



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>gb|DQ206511.1| Priapulus caudatus isolate TOA62 ATPase alpha-subunit mRNA, partial
           cds
          Length = 1240

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 205 cgccgccgtccccgacggcgtcgcca 230
           ||||||||||||||||| ||||||||
Sbjct: 609 cgccgccgtccccgacgccgtcgcca 634



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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 47   cccgccatggccgccgcctccacctc 72
            |||||| |||||||||||||||||||
Sbjct: 8905 cccgccgtggccgccgcctccacctc 8930



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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 47    cccgccatggccgccgcctccacctc 72
             |||||| |||||||||||||||||||
Sbjct: 57591 cccgccgtggccgccgcctccacctc 57566



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>ref|NM_205476.1| Gallus gallus Na,K-ATPase alpha-2-subunit (LOC396468), mRNA
 gb|M59959.1|CHKNAKAT2 Chicken NA,K-ATPase alpha-2-subunit mRNA, complete cds
          Length = 3054

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 198  cccccctcgccgccgtccccgacggcgtcg 227
            |||||| ||||||||||||||||| |||||
Sbjct: 1763 ccccccgcgccgccgtccccgacgccgtcg 1792



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>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm
          Length = 1367119

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    ctcctgcgccgcccccctcgccgcc 211
              |||| ||||||||||||||||||||
Sbjct: 151851 ctccagcgccgcccccctcgccgcc 151827



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>emb|CT832960.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA233C22, full
           insert sequence
          Length = 2057

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 48  ccgccatggccgccgcctcca 68
           |||||||||||||||||||||
Sbjct: 768 ccgccatggccgccgcctcca 788



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>ref|NM_001070307.1| Oryza sativa (japonica cultivar-group) Os09g0534000 (Os09g0534000)
           mRNA, complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  gccgccgcctccacctccctc 76
           |||||||||||||||||||||
Sbjct: 157 gccgccgcctccacctccctc 177



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>ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g0247900 (Os06g0247900)
           mRNA, partial cds
          Length = 1592

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 48  ccgccatggccgccgcctcca 68
           |||||||||||||||||||||
Sbjct: 306 ccgccatggccgccgcctcca 326



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>ref|NM_001059412.1| Oryza sativa (japonica cultivar-group) Os04g0441700 (Os04g0441700)
           mRNA, complete cds
          Length = 1449

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  ccacccgccatggccgccgcc 64
           |||||||||||||||||||||
Sbjct: 302 ccacccgccatggccgccgcc 322



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>ref|NM_001059411.1| Oryza sativa (japonica cultivar-group) Os04g0441800 (Os04g0441800)
            mRNA, complete cds
          Length = 2109

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ccacccgccatggccgccgcc 64
            |||||||||||||||||||||
Sbjct: 1746 ccacccgccatggccgccgcc 1726



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>ref|NM_001054088.1| Oryza sativa (japonica cultivar-group) Os02g0641900 (Os02g0641900)
           mRNA, partial cds
          Length = 1398

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 48  ccgccatggccgccgcctccacctc 72
           ||||||||| |||||||||||||||
Sbjct: 891 ccgccatggtcgccgcctccacctc 867



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>emb|AM279695.1| Streptomyces ambofaciens DSM 40697 right terminal inverted repeat
          Length = 237382

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    ctcctgcgccgcccccctcgccgcc 211
              |||| ||||||||||||||||||||
Sbjct: 164505 ctccagcgccgcccccctcgccgcc 164481



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>emb|AM279694.1| Streptomyces ambofaciens DSM 40697 left terminal inverted repeat
          Length = 238517

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    ctcctgcgccgcccccctcgccgcc 211
              |||| ||||||||||||||||||||
Sbjct: 164505 ctccagcgccgcccccctcgccgcc 164481



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>emb|AM384990.1| Enterobacter sakazakii clone BAC 9E10, containing  pigment gene cluster
          Length = 33025

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 528   tcgacgcgttcgacgtggtgt 548
             |||||||||||||||||||||
Sbjct: 27001 tcgacgcgttcgacgtggtgt 26981



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 33      gccaccaccgcccacccgcca 53
               |||||||||||||||||||||
Sbjct: 3195744 gccaccaccgcccacccgcca 3195724



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>gb|DQ679837.1| Lobesia botrana actin mRNA, partial cds
          Length = 459

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  gccgccgcctccacctccctc 76
           |||||||||||||||||||||
Sbjct: 227 gccgccgcctccacctccctc 247



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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    ctcctgcgccgcccccctcgccgcc 211
              |||| ||||||||||||||||||||
Sbjct: 151851 ctccagcgccgcccccctcgccgcc 151827



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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    ctcctgcgccgcccccctcgccgcc 211
              |||| ||||||||||||||||||||
Sbjct: 151851 ctccagcgccgcccccctcgccgcc 151827



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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    gccgccgcctccacctccctc 76
             |||||||||||||||||||||
Sbjct: 59307 gccgccgcctccacctccctc 59327



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>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene
             cluster, partial sequence
          Length = 85915

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 48    ccgccatggccgccgcctccacctc 72
             |||||||||||||||||||| ||||
Sbjct: 47264 ccgccatggccgccgcctccgcctc 47240



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>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20
              map S2137, complete sequence
          Length = 125303

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     ccacccgccatggccgccgcc 64
              |||||||||||||||||||||
Sbjct: 114345 ccacccgccatggccgccgcc 114325



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 532     cgcgttcgacgtggtgttcgtctgc 556
               ||||||||||| |||||||||||||
Sbjct: 3508614 cgcgttcgacgcggtgttcgtctgc 3508638



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 532    cgcgttcgacgtggtgttcgtctgc 556
              ||||||||||| |||||||||||||
Sbjct: 313798 cgcgttcgacgcggtgttcgtctgc 313774



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>gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, complete sequence
          Length = 227600

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    ctcccatcatcctccggccac 37
             |||||||||||||||||||||
Sbjct: 32017 ctcccatcatcctccggccac 32037



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>gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome 5, complete sequence
          Length = 209392

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 134    caccttgaccccaaacttccc 154
              |||||||||||||||||||||
Sbjct: 202750 caccttgaccccaaacttccc 202730



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>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence
          Length = 119933

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    ccccaaccccagttccaaccg 130
              |||||||||||||||||||||
Sbjct: 114579 ccccaaccccagttccaaccg 114599



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>gb|AY487307.1| Ficus carica endo-glucanase 2 mRNA, partial cds
          Length = 735

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 48  ccgccatggccgccgcctcca 68
           |||||||||||||||||||||
Sbjct: 94  ccgccatggccgccgcctcca 114



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>gb|AC126447.3| Mus musculus BAC clone RP23-352G19 from chromosome 5, complete sequence
          Length = 196904

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   ccccaaccccagttccaaccg 130
             |||||||||||||||||||||
Sbjct: 17932 ccccaaccccagttccaaccg 17952



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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   caccttgaccccaaacttccc 154
             |||||||||||||||||||||
Sbjct: 69655 caccttgaccccaaacttccc 69635



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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 193    cgccgcccccctcgccgccgtccccgacg 221
              ||||| || ||||||||||||||||||||
Sbjct: 187846 cgccgacctcctcgccgccgtccccgacg 187874



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>dbj|AK126419.1| Homo sapiens cDNA FLJ44455 fis, clone UTERU2023687, highly
          similar to RETICULOCALBIN 1 PRECURSOR
          Length = 2652

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 cgcctccacctccctctccct 81
          |||||||||||||||||||||
Sbjct: 35 cgcctccacctccctctccct 15



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>gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, complete sequence
          Length = 157284

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     ctcccatcatcctccggccac 37
              |||||||||||||||||||||
Sbjct: 128316 ctcccatcatcctccggccac 128336



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>gb|AF434716.1| Frankliniella occidentalis actin gene, partial cds
          Length = 881

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  gccgccgcctccacctccctc 76
           |||||||||||||||||||||
Sbjct: 504 gccgccgcctccacctccctc 524



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>tpg|BK000774.1| TPA_inf: Oryza sativa transposon Rim2-M184, complete sequence
          Length = 1146

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  ccacccgccatggccgccgcc 64
           |||||||||||||||||||||
Sbjct: 504 ccacccgccatggccgccgcc 524



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>tpg|BK000800.1| TPA_inf: Oryza sativa transposon Rim2-M211, complete sequence
          Length = 1218

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  ccacccgccatggccgccgcc 64
           |||||||||||||||||||||
Sbjct: 696 ccacccgccatggccgccgcc 716



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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     cgccatggccgccgcctccacctcc 73
              |||||| ||||||||||||||||||
Sbjct: 178034 cgccatcgccgccgcctccacctcc 178058



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 44      ccacccgccatggccgccgcc 64
               |||||||||||||||||||||
Sbjct: 8210990 ccacccgccatggccgccgcc 8210970



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 56       gccgccgcctccacctccctc 76
                |||||||||||||||||||||
Sbjct: 20684830 gccgccgcctccacctccctc 20684810



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 48      ccgccatggccgccgcctcca 68
               |||||||||||||||||||||
Sbjct: 7684199 ccgccatggccgccgcctcca 7684179



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 48       ccgccatggccgccgcctccacctc 72
                ||||||||| |||||||||||||||
Sbjct: 25798781 ccgccatggtcgccgcctccacctc 25798757



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 44       ccacccgccatggccgccgcc 64
                |||||||||||||||||||||
Sbjct: 12131225 ccacccgccatggccgccgcc 12131245



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 56       gccgccgcctccacctccctc 76
                |||||||||||||||||||||
Sbjct: 19979079 gccgccgcctccacctccctc 19979059



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>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0072I06
          Length = 162411

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 58     cgccgcctccacctccctctccctcgcct 86
              ||||||||||||| ||||||||| |||||
Sbjct: 114809 cgccgcctccaccgccctctcccacgcct 114781



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>emb|AL157884.9| Human DNA sequence from clone RP11-462B18 on chromosome 9p13.1-21.1
             Contains a pseudogene similar to part of membrane guanylyl
             cyclase, a ribosomal protein S11 (RPS11) pseudogene, a
             novel gene and a CpG island, complete sequence
          Length = 176932

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 71    tccctctccctcgccttctgtcctctctt 99
             |||||||||||| ||||||||||||||||
Sbjct: 13022 tccctctccctc-ccttctgtcctctctt 12995



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>emb|AL078612.8|HSDJ65P5 Human DNA sequence from clone RP1-65P5 on chromosome 11p13 Contains the
             RCN1 gene for EF-hand calcium binding domain protein
             reticulocalbin 1, a seudogene similar to part of EIF4A
             (Eukaryotic Initiation Factor 4A), ESTs, STSs, GSSs and a
             putative CpG island, complete sequence
          Length = 94497

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    cgcctccacctccctctccct 81
             |||||||||||||||||||||
Sbjct: 66895 cgcctccacctccctctccct 66915



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>gb|U86888.1|MCU86888 Molluscum contagiosum virus subtype 1 clone H-H hypothetical
           protein (H-H2.2) and hypothetical protein (H-H2.1)
           genes, partial cds
          Length = 919

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 49  cgccatggccgccgcctccacctcc 73
           |||||| ||||||||||||||||||
Sbjct: 794 cgccatcgccgccgcctccacctcc 770



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>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    gccgccgcctccacctccctc 76
             |||||||||||||||||||||
Sbjct: 81988 gccgccgcctccacctccctc 81968



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>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ccacccgccatggccgccgcc 64
             |||||||||||||||||||||
Sbjct: 45379 ccacccgccatggccgccgcc 45399



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete
             sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 532   cgcgttcgacgtggtgttcgtctgc 556
             ||||||||||| |||||||||||||
Sbjct: 88511 cgcgttcgacgcggtgttcgtctgc 88487



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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    gccgccgcctccacctccctc 76
             |||||||||||||||||||||
Sbjct: 78441 gccgccgcctccacctccctc 78421



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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1136_C11
          Length = 124827

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     ccgccatggccgccgcctcca 68
              |||||||||||||||||||||
Sbjct: 107454 ccgccatggccgccgcctcca 107434



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>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1153F04
          Length = 158174

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ccacccgccatggccgccgcc 64
             |||||||||||||||||||||
Sbjct: 98165 ccacccgccatggccgccgcc 98185



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>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G03
          Length = 106401

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 48    ccgccatggccgccgcctccacctc 72
             ||||||||| |||||||||||||||
Sbjct: 45387 ccgccatggtcgccgcctccacctc 45363



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>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14,
             complete sequence
          Length = 164868

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    ccctctccctcgccttctgtc 92
             |||||||||||||||||||||
Sbjct: 56738 ccctctccctcgccttctgtc 56758



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>dbj|AK108621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D04, full
           insert sequence
          Length = 1399

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 48  ccgccatggccgccgcctccacctc 72
           ||||||||| |||||||||||||||
Sbjct: 892 ccgccatggtcgccgcctccacctc 868



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>dbj|AK106786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H12,
          full insert sequence
          Length = 1602

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 58 cgccgcctccacctccctctccctcgcct 86
          ||||||||||||| ||||||||| |||||
Sbjct: 89 cgccgcctccaccgccctctcccacgcct 61



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>dbj|AK100026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I06, full
           insert sequence
          Length = 1567

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  gccgccgcctccacctccctc 76
           |||||||||||||||||||||
Sbjct: 158 gccgccgcctccacctccctc 178



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>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ccacccgccatggccgccgcc 64
             |||||||||||||||||||||
Sbjct: 52028 ccacccgccatggccgccgcc 52048



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>dbj|AK072763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P09, full
           insert sequence
          Length = 1450

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  ccacccgccatggccgccgcc 64
           |||||||||||||||||||||
Sbjct: 303 ccacccgccatggccgccgcc 323



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>dbj|AK069010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I18, full
           insert sequence
          Length = 1782

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 58  cgccgcctccacctccctctccctcgcct 86
           ||||||||||||| ||||||||| |||||
Sbjct: 128 cgccgcctccaccgccctctcccacgcct 100



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>dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P24, full
           insert sequence
          Length = 1596

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 48  ccgccatggccgccgcctcca 68
           |||||||||||||||||||||
Sbjct: 308 ccgccatggccgccgcctcca 328



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>dbj|AK064785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B16, full
            insert sequence
          Length = 2110

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   ccacccgccatggccgccgcc 64
            |||||||||||||||||||||
Sbjct: 1747 ccacccgccatggccgccgcc 1727



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>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014,
              complete sequence
          Length = 129532

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cgccgcctccacctccctctccctc 82
              ||||||| |||||||||||||||||
Sbjct: 104364 cgccgccaccacctccctctccctc 104340



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>gb|AE005015.1| Halobacterium sp. NRC-1 section 46 of 170 of the complete genome
          Length = 10048

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 204  tcgccgccgtccccgacggcg 224
            |||||||||||||||||||||
Sbjct: 7976 tcgccgccgtccccgacggcg 7996



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>emb|AL671400.5| Mouse DNA sequence from clone RP23-109C6 on chromosome X, complete
              sequence
          Length = 188391

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 825    atttttgtaagacagattatg 845
              |||||||||||||||||||||
Sbjct: 156419 atttttgtaagacagattatg 156399



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>ref|XM_310891.2| Anopheles gambiae str. PEST ENSANGP00000012381 (ENSANGG00000009892),
            partial mRNA
          Length = 1755

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 195  ccgcccccctcgccgccgtcc 215
            |||||||||||||||||||||
Sbjct: 1735 ccgcccccctcgccgccgtcc 1755



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>dbj|AP003894.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1412_D01, complete sequence
          Length = 39600

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 58   cgccgcctccacctccctctccctcgcct 86
            ||||||||||||| ||||||||| |||||
Sbjct: 8682 cgccgcctccaccgccctctcccacgcct 8654



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 532     cgcgttcgacgtggtgttcgtctgc 556
               ||||||||||| |||||||||||||
Sbjct: 3688788 cgcgttcgacgcggtgttcgtctgc 3688812



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>emb|CR931784.7| Zebrafish DNA sequence from clone DKEY-237H12 in linkage group 14,
              complete sequence
          Length = 223042

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     ccctctccctcgccttctgtc 92
              |||||||||||||||||||||
Sbjct: 153274 ccctctccctcgccttctgtc 153254



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>emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0049I21,
             complete sequence
          Length = 141935

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ccacccgccatggccgccgcc 64
             |||||||||||||||||||||
Sbjct: 25965 ccacccgccatggccgccgcc 25985



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>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940143D9, complete sequence
          Length = 118759

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 51   ccatggccgccgcctccacct 71
            |||||||||||||||||||||
Sbjct: 4674 ccatggccgccgcctccacct 4694



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>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940139D9, complete sequence
          Length = 118752

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 51   ccatggccgccgcctccacct 71
            |||||||||||||||||||||
Sbjct: 4674 ccatggccgccgcctccacct 4694



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>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940124D9, complete sequence
          Length = 118889

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 51     ccatggccgccgcctccacct 71
              |||||||||||||||||||||
Sbjct: 114085 ccatggccgccgcctccacct 114065


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 128,960,563
Number of extensions: 7306481
Number of successful extensions: 194204
Number of sequences better than 10.0: 100
Number of HSP's gapped: 194204
Number of HSP's successfully gapped: 111
Length of query: 906
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 883
Effective length of database: 18,503,978,556
Effective search space: 16339013064948
Effective search space used: 16339013064948
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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