ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31p20 |
|---|---|
| Clone Library Name | barley_pub |
>Q0D2K0:ICHN_HUMAN Ichthyin - Homo sapiens (Human)| Length = 404 Score = 41.2 bits (95), Expect = 0.016 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +2 Query: 1466 YVYIIFI*LRAMVISPFQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 YV+ + + + +I F++W S SA IA L GFVTI+ G F+LH Sbjct: 299 YVFFTTVVVTSSIIL-FKEWYSMSAVDIAGTLSGFVTIILGVFMLH 343
>Q8BZF2:ICHN_MOUSE Ichthyin - Mus musculus (Mouse)| Length = 406 Score = 38.1 bits (87), Expect = 0.13 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = +2 Query: 1466 YVYIIFI*LRAMVISPFQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 YV+ + + + ++ F++W + SA I L GFVTI+ G F+LH Sbjct: 301 YVFFTTVVVASSIVL-FKEWYTMSAVDIVGTLSGFVTIILGVFMLH 345
>Q5RDB8:NPAL1_PONPY NIPA-like protein 1 - Pongo pygmaeus (Orangutan)| Length = 410 Score = 35.0 bits (79), Expect = 1.1 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +2 Query: 1469 VYIIFI*LRAMVISP--FQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 +Y +F + S FQ+W +A I L GF TI+ G FLLH Sbjct: 309 IYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLH 355
>Q6NVV3:NPAL1_HUMAN NIPA-like protein 1 - Homo sapiens (Human)| Length = 410 Score = 35.0 bits (79), Expect = 1.1 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +2 Query: 1469 VYIIFI*LRAMVISP--FQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 +Y +F + S FQ+W +A I L GF TI+ G FLLH Sbjct: 309 IYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLH 355
>Q10909:YS95_CAEEL Putative G-protein coupled receptor B0244.5 - Caenorhabditis elegans| Length = 300 Score = 33.5 bits (75), Expect = 3.3 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = -3 Query: 1814 ATTRPI*YSIRLHVLVVSKFWYIWYLLDVELKLGN 1710 AT RPI YSI++ V +V KF + LL V L +GN Sbjct: 143 ATVRPIFYSIQISVRIVYKFALVNVLLAVVLAIGN 177
>Q5R7Q3:NIPA2_PONPY Non-imprinted in Prader-Willi/Angelman syndrome region protein 2| homolog - Pongo pygmaeus (Orangutan) Length = 360 Score = 32.0 bits (71), Expect = 9.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 1469 VYIIFI*LRAMVISP--FQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 +Y +F + S F++W + L GF TI+ G FLLH Sbjct: 251 IYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLH 297
>Q9JJC8:NIPA2_MOUSE Non-imprinted in Prader-Willi/Angelman syndrome region protein 2| homolog - Mus musculus (Mouse) Length = 359 Score = 32.0 bits (71), Expect = 9.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 1469 VYIIFI*LRAMVISP--FQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 +Y +F + S F++W + L GF TI+ G FLLH Sbjct: 251 IYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLH 297
>Q8N8Q9:NIPA2_HUMAN Non-imprinted in Prader-Willi/Angelman syndrome region protein 2 -| Homo sapiens (Human) Length = 360 Score = 32.0 bits (71), Expect = 9.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 1469 VYIIFI*LRAMVISP--FQDWVSQSATQIATQLCGFVTIVAGTFLLH 1603 +Y +F + S F++W + L GF TI+ G FLLH Sbjct: 251 IYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLH 297 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 335,827,826 Number of extensions: 7392228 Number of successful extensions: 14862 Number of sequences better than 10.0: 8 Number of HSP's gapped: 14853 Number of HSP's successfully gapped: 8 Length of query: 655 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 535 Effective length of database: 67,771,039 Effective search space: 36257505865 Effective search space used: 36257505865 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
