ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf31a24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109481:Os02g0195000 | 696 | 0.0 | 2 | AK102395:Os02g0195000 | 696 | 0.0 | 3 | AK109020: | 31 | 2.0 | 4 | AK068888:Os06g0163200 | 31 | 2.6 | 5 | Os01g0264000:Os01g0264000 | 30 | 3.4 | 6 | AK068728:Os01g0564400 | 30 | 3.4 | 7 | AK069986:Os03g0138000 | 30 | 4.5 | 8 | AK065483:Os03g0132300 | 29 | 7.7 | 9 | AK073436:Os04g0685500 | 29 | 7.7 | 10 | AK070655:Os04g0685500 | 29 | 7.7 |
|---|
>AK109481:Os02g0195000 | Length = 366 Score = 696 bits (1796), Expect = 0.0 Identities = 335/366 (91%), Positives = 354/366 (96%), Gaps = 2/366 (0%) Frame = +1 Query: 199 MVSVNVGLVHYVLDHIYGTLLHRTKLGTPFFSKGWGGTKLDLLERMVKQLFPEAPCQSWP 378 MVSVN+GLVHYVLDHIYGT+LHRTKLGTPFFSKGWGGTKLDLLE+MVKQLFPEA CQ+WP Sbjct: 1 MVSVNLGLVHYVLDHIYGTVLHRTKLGTPFFSKGWGGTKLDLLEKMVKQLFPEARCQNWP 60 Query: 379 PTAVQPKWKTVWETKNSCLREGVFRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMAC 558 PTAVQP WKTVWETK+SCLREGVFRTTCD RLI+ALPPESHNARVAFLTPK VSPEKMAC Sbjct: 61 PTAVQPMWKTVWETKSSCLREGVFRTTCDPRLIEALPPESHNARVAFLTPKSVSPEKMAC 120 Query: 559 VVHLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHGAKLQCVSDLLLLG 738 V+HLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHG+KLQCVSDLLLLG Sbjct: 121 VIHLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHGSKLQCVSDLLLLG 180 Query: 739 KATIDEARSLLYWLQAEAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP 918 KATIDEARSLLYWLQ EAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP Sbjct: 181 KATIDEARSLLYWLQNEAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP 240 Query: 919 FCEGLYRHATAWEALREDAAALAKDATSLSEDAA--SGITIEQVKDRLRSVLSLTDVTRF 1092 FC+GLYRHATAW+ALR+DAA LA+D TSL+ED A SGITIEQV++RLRSVLSLTDVTRF Sbjct: 241 FCDGLYRHATAWDALRKDAATLAQDVTSLTEDMAQKSGITIEQVRERLRSVLSLTDVTRF 300 Query: 1093 PLPKNPQAVIFVGATDDGYIPRHSVMELQKAWPGSEVRWVMGGHVSSFLLHNDSFRKAIV 1272 P+PKNPQAVIFVGATDDGYIP+HS+MELQKAWPGSEVRWV GGHVSSF LHND+FRKAIV Sbjct: 301 PVPKNPQAVIFVGATDDGYIPKHSIMELQKAWPGSEVRWVTGGHVSSFFLHNDAFRKAIV 360 Query: 1273 DALDRL 1290 DALDRL Sbjct: 361 DALDRL 366
>AK102395:Os02g0195000 | Length = 366 Score = 696 bits (1796), Expect = 0.0 Identities = 335/366 (91%), Positives = 354/366 (96%), Gaps = 2/366 (0%) Frame = +1 Query: 199 MVSVNVGLVHYVLDHIYGTLLHRTKLGTPFFSKGWGGTKLDLLERMVKQLFPEAPCQSWP 378 MVSVN+GLVHYVLDHIYGT+LHRTKLGTPFFSKGWGGTKLDLLE+MVKQLFPEA CQ+WP Sbjct: 1 MVSVNLGLVHYVLDHIYGTVLHRTKLGTPFFSKGWGGTKLDLLEKMVKQLFPEARCQNWP 60 Query: 379 PTAVQPKWKTVWETKNSCLREGVFRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMAC 558 PTAVQP WKTVWETK+SCLREGVFRTTCD RLI+ALPPESHNARVAFLTPK VSPEKMAC Sbjct: 61 PTAVQPMWKTVWETKSSCLREGVFRTTCDPRLIEALPPESHNARVAFLTPKSVSPEKMAC 120 Query: 559 VVHLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHGAKLQCVSDLLLLG 738 V+HLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHG+KLQCVSDLLLLG Sbjct: 121 VIHLAGTGDHSFERRLRLGGPLLKDNIATMVLESPYYGQRRPSMQHGSKLQCVSDLLLLG 180 Query: 739 KATIDEARSLLYWLQAEAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP 918 KATIDEARSLLYWLQ EAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP Sbjct: 181 KATIDEARSLLYWLQNEAGYGKMGICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVP 240 Query: 919 FCEGLYRHATAWEALREDAAALAKDATSLSEDAA--SGITIEQVKDRLRSVLSLTDVTRF 1092 FC+GLYRHATAW+ALR+DAA LA+D TSL+ED A SGITIEQV++RLRSVLSLTDVTRF Sbjct: 241 FCDGLYRHATAWDALRKDAATLAQDVTSLTEDMAQKSGITIEQVRERLRSVLSLTDVTRF 300 Query: 1093 PLPKNPQAVIFVGATDDGYIPRHSVMELQKAWPGSEVRWVMGGHVSSFLLHNDSFRKAIV 1272 P+PKNPQAVIFVGATDDGYIP+HS+MELQKAWPGSEVRWV GGHVSSF LHND+FRKAIV Sbjct: 301 PVPKNPQAVIFVGATDDGYIPKHSIMELQKAWPGSEVRWVTGGHVSSFFLHNDAFRKAIV 360 Query: 1273 DALDRL 1290 DALDRL Sbjct: 361 DALDRL 366
>AK109020: | Length = 301 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = +1 Query: 958 ALREDAAALAKDATSLSEDAASGITIEQVKDRLRSVLSLTDVTR 1089 ALR AA A+ A + AA+ T+ +++DRL+S+ ++ +T+ Sbjct: 9 ALRAGLAAAARPAPLNAPAAATYATLREIEDRLKSIRNIEKITK 52
>AK068888:Os06g0163200 | Length = 376 Score = 30.8 bits (68), Expect = 2.6 Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 30/286 (10%) Frame = +1 Query: 415 ETKNSCLREGVFRTTCDERLIDA----LPPESHNARVAFLTPK--DVSPEKMACVVHLAG 576 E SC R+GV + E+L++ + RV L K D +P++ +V L Sbjct: 73 EAMESCPRKGVVNSK--EKLVEENFYLITESGEQGRVPVLLLKLNDTTPKRKPVIVFL-- 128 Query: 577 TGDHSFERRLRLGGPLLKDNIA----TMVLESPYYGQR-----------RPSMQHGAK-- 705 HS + PLL+ + ++ ++S Y+G+R + + ++G Sbjct: 129 ---HSSYKCKEWLRPLLEAYASRGYISVAIDSRYHGERANNNSTYIDALKSAWRNGDAMP 185 Query: 706 --LQCVSDLLLLGKATIDEARSLLYWLQAEAGYGKMGICGLSMGGVHAAMVGSLHPTPIA 879 L V DL+ LG + + + ++GI G S+GG+HA + Sbjct: 186 FILDTVWDLIKLGDHLSE---------REDVDPCRIGITGESLGGMHAWFAAVVDTRYSV 236 Query: 880 TLPFLAPHSAVVPFCEGLYRHA---TAWEALREDAAALAKDA-TSLSEDAASGITIEQVK 1047 +P + +R A W+A + L ++A L + +E+V Sbjct: 237 VVPIIGVQG---------FRWAIDNNKWQARVDSIKPLFEEARIDLGKSEIDTEVVEKVW 287 Query: 1048 DRLRSVLSLTDVTRFPLPK-NPQAVIFVGATDDGYIPRHSVMELQK 1182 D++ L F LP P+ ++ + +D PR V+ LQ+ Sbjct: 288 DKIAPGLDSQFDAPFSLPVIAPRPLLLLNGAED---PRCPVLGLQE 330
>Os01g0264000:Os01g0264000 | Length = 551 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = -3 Query: 1346 MSLQSSIGVAMGTQESPCYNLSRASTMALRNESLWSKKEDTWPPITHRTSEPGHAFWSSM 1167 MS SS + SP SR S++ L+ + +++ W P T R +P A SS+ Sbjct: 441 MSPSSSSNSSCSGNGSPLGKHSRDSSLPLKEDK---EEKSLWVPKTLRIDDPDEAAKSSI 497 Query: 1166 TECLGI*P 1143 LGI P Sbjct: 498 WATLGIKP 505
>AK068728:Os01g0564400 | Length = 153 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/68 (29%), Positives = 26/68 (38%) Frame = -3 Query: 929 PSQKGTTAECGARNGSVAIGVGCKDPTIAACTPPMLSPHMPILP*PASACNQYKRLRASS 750 PS G + GA A D + AC PP L ++P+ AC + SS Sbjct: 66 PSPGGRPSRAGAPTRPTAAPRSSHDASSLACGPPDLLAYLPLPSLHKPACGKTSASFVSS 125 Query: 749 IVAFPKSS 726 V P S Sbjct: 126 AVGLPLDS 133
>AK069986:Os03g0138000 | Length = 671 Score = 30.0 bits (66), Expect = 4.5 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 636 IVLQKRSAKP*PSLK*VITGACQMDHASHLLW 541 IVL++ +P P+++ +T A Q+D +H+ W Sbjct: 602 IVLRRLGERPLPAVRCFLTDALQLDRTNHIAW 633
>AK065483:Os03g0132300 | Length = 288 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +3 Query: 12 PKRTRSKSPASVPQSAPGDNPHASDPRAAFLAPPRIQ 122 P +TR +PA P AP P P A APPR Q Sbjct: 164 PAQTRQVNPAPQPVPAPSVPPLPPQPTQAPSAPPRNQ 200
>AK073436:Os04g0685500 | Length = 353 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 410 FGRQRTLVCERVFSGQHVMRD*LMHCLLRVTMQELLFL 523 FG +R L C++VF G++ +D HC VT + L L Sbjct: 208 FGAERIL-CDQVFEGKYTWKD---HCFAEVTAKSLSIL 241
>AK070655:Os04g0685500 | Length = 542 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 410 FGRQRTLVCERVFSGQHVMRD*LMHCLLRVTMQELLFL 523 FG +R L C++VF G++ +D HC VT + L L Sbjct: 208 FGAERIL-CDQVFEGKYTWKD---HCFAEVTAKSLSIL 241 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,416,665 Number of extensions: 1154542 Number of successful extensions: 3434 Number of sequences better than 10.0: 10 Number of HSP's gapped: 3428 Number of HSP's successfully gapped: 10 Length of query: 502 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 397 Effective length of database: 11,195,550 Effective search space: 4444633350 Effective search space used: 4444633350 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
