ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31a24 |
|---|---|
| Clone Library Name | barley_pub |
>Q8X716:BIOH_ECO57 Carboxylesterase bioH - Escherichia coli O157:H7| Length = 256 Score = 36.6 bits (83), Expect = 0.29 Identities = 32/112 (28%), Positives = 44/112 (39%) Frame = +1 Query: 955 EALREDAAALAKDATSLSEDAASGITIEQVKDRLRSVLSLTDVTRFPLPKNPQAVIFVGA 1134 E R+DA AL K +L V + +L D+ R PL P + + Sbjct: 152 ETARQDARALKKTVLALPMPEVD------VLNGGLEILKTVDL-RLPLQNVPMPFLRLYG 204 Query: 1135 TDDGYIPRHSVMELQKAWPGSEVRWVMGGHVSSFLLHNDSFRKAIVDALDRL 1290 DG +PR V L K WP SE + F+ H FR +V R+ Sbjct: 205 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPVEFRHVLVALKQRV 256
>Q8FCT4:BIOH_ECOL6 Carboxylesterase bioH - Escherichia coli O6| Length = 256 Score = 35.4 bits (80), Expect = 0.64 Identities = 32/112 (28%), Positives = 44/112 (39%) Frame = +1 Query: 955 EALREDAAALAKDATSLSEDAASGITIEQVKDRLRSVLSLTDVTRFPLPKNPQAVIFVGA 1134 E R+DA AL K +L V + +L D+ R PL P + + Sbjct: 152 ETARQDARALKKTVLALPMPEVD------VLNGGLEILKTVDL-RQPLQNVPMPFLRLYG 204 Query: 1135 TDDGYIPRHSVMELQKAWPGSEVRWVMGGHVSSFLLHNDSFRKAIVDALDRL 1290 DG +PR V L K WP SE + F+ H D F +V R+ Sbjct: 205 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPDEFCHLLVALKQRV 256
>Q6GLL2:ABH6A_XENLA Abhydrolase domain-containing protein 6-A - Xenopus laevis (African| clawed frog) Length = 337 Score = 35.4 bits (80), Expect = 0.64 Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 6/187 (3%) Frame = +1 Query: 811 ICGLSMGGVHAAMVGSLHPTPIATLPFLAPHSAVVPFCEGLYRHATAWEALREDAAALAK 990 + G SMGG A + + HPT I++L + P + P +H E +D L Sbjct: 144 LVGTSMGGNVAGVYAAQHPTDISSLTLICPAGLMYPTESKFLKHLKGLEKSGDDQRILLI 203 Query: 991 DATS-LSEDAASGITIEQVKDRLRSVLSLTDVTRFPLPKNP-QAVIFVGATDDGYIPRHS 1164 +T+ ED + + K + + L DV +P N +F+ ++ RHS Sbjct: 204 PSTAGEMEDMLRLCSFVRFKIPQQVLQGLVDVR---IPHNEFYRQLFMALVNEK--SRHS 258 Query: 1165 VME-LQKAWPGSEVRWVMGGH---VSSFLLHNDSFRKAIVDALDRL*QGDSCVPMATPIE 1332 + E + K +++ W VS + S R V+ L+ G S V M P + Sbjct: 259 LQENMNKIVAPTQIIWGKQDQVLDVSGAEVLAGSIRGCQVEILENC--GHSVV-MERPRK 315 Query: 1333 LCKLMTD 1353 KLMTD Sbjct: 316 SAKLMTD 322
>P54567:YQKD_BACSU Uncharacterized protein yqkD - Bacillus subtilis| Length = 305 Score = 34.7 bits (78), Expect = 1.1 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = +1 Query: 1051 RLRSVLSLTDVTRFPLPKNPQAVIFVGATDDGYIPRHSVMELQKAWPGSEVRWVM--GGH 1224 R R V L + + P V+F+ + DD YIP S L + G + ++ G H Sbjct: 224 RAREVSPLAVIDKIEKP-----VLFIHSKDDDYIPVSSTERLYEKKRGPKALYIAENGEH 278 Query: 1225 VSSFLLHNDSFRKAIVDALDRL 1290 S+ + ++RK + + LD + Sbjct: 279 AMSYTKNRHTYRKTVQEFLDNM 300
>Q8N6F8:WBS27_HUMAN Williams-Beuren syndrome chromosome region 27 protein - Homo sapiens| (Human) Length = 245 Score = 34.7 bits (78), Expect = 1.1 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Frame = +1 Query: 1012 DAASGITIEQVKDRLRSVLSLTDVTRFPLPKNP---QAVIFVGATDDGYIPRHSVMELQK 1182 D + G+ + L LSL + + PLP AV+ VGA DG +P +++ EL Sbjct: 97 DGSPGMLEQARAPGLYQRLSLCTLGQEPLPSPEGTFDAVLIVGALSDGQVPCNAIPELHV 156 Query: 1183 AWPGSEVRWVMGGHVSSFLLHNDSFRKAIVDALDRL*Q 1296 PG V + S N +++A+ LDRL Q Sbjct: 157 TKPGGLVCLTTRTNWS-----NLQYKEALEATLDRLEQ 189
>Q68WV8:SYL_RICTY Leucyl-tRNA synthetase - Rickettsia typhi| Length = 828 Score = 32.7 bits (73), Expect = 4.1 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = -1 Query: 850 PLQHVRHPC*AHI-CPSCHNQPQPATSIRDCELHQ*WLFLRVASHSHIEAWPHAAC 686 PL+H HP H+ CP C N T D W F R +++ +E AC Sbjct: 450 PLEH--HPSWKHVNCPKCDNHAIRETDTFDTFFESSWYFTRYCNNNAVEMTDSKAC 503
>Q62812:MYH9_RAT Myosin-9 - Rattus norvegicus (Rat)| Length = 1961 Score = 32.3 bits (72), Expect = 5.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 517 FLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLLKDNIATMVLES 660 F PK + + C++H AG D+ + L L DNIAT++ +S Sbjct: 556 FQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNIATLLHQS 603
>Q8VDD5:MYH9_MOUSE Myosin-9 - Mus musculus (Mouse)| Length = 1960 Score = 32.3 bits (72), Expect = 5.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 517 FLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLLKDNIATMVLES 660 F PK + + C++H AG D+ + L L DNIAT++ +S Sbjct: 556 FQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNIATLLHQS 603
>P35579:MYH9_HUMAN Myosin-9 - Homo sapiens (Human)| Length = 1960 Score = 32.3 bits (72), Expect = 5.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 517 FLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLLKDNIATMVLES 660 F PK + + C++H AG D+ + L L DNIAT++ +S Sbjct: 556 FQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNIATLLHQS 603
>P14105:MYH9_CHICK Myosin-9 - Gallus gallus (Chicken)| Length = 1959 Score = 32.3 bits (72), Expect = 5.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 517 FLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLLKDNIATMVLES 660 F PK + + C++H AG D+ + L L DNIAT++ +S Sbjct: 556 FQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNIATLLHQS 603
>Q258K2:MYH9_CANFA Myosin-9 - Canis familiaris (Dog)| Length = 1960 Score = 32.3 bits (72), Expect = 5.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 517 FLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLLKDNIATMVLES 660 F PK + + C++H AG D+ + L L DNIAT++ +S Sbjct: 556 FQKPKQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNIATLLHQS 603
>Q9JLT0:MYH10_RAT Myosin-10 - Rattus norvegicus (Rat)| Length = 1976 Score = 32.3 bits (72), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +1 Query: 448 FRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLL 627 F D+ ++ L E + F P+ + + C++H AG D+ + L L Sbjct: 541 FPKATDKTFVEKLVQEQ-GSHSKFQKPRQLKDKADFCIIHYAGKVDYKADEWLMKNMDPL 599 Query: 628 KDNIATMVLES 660 DN+AT++ +S Sbjct: 600 NDNVATLLHQS 610
>Q61879:MYH10_MOUSE Myosin-10 - Mus musculus (Mouse)| Length = 1976 Score = 32.3 bits (72), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +1 Query: 448 FRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLL 627 F D+ ++ L E + F P+ + + C++H AG D+ + L L Sbjct: 541 FPKATDKTFVEKLVQEQ-GSHSKFQKPRQLKDKADFCIIHYAGKVDYKADEWLMKNMDPL 599 Query: 628 KDNIATMVLES 660 DN+AT++ +S Sbjct: 600 NDNVATLLHQS 610
>P35580:MYH10_HUMAN Myosin-10 - Homo sapiens (Human)| Length = 1976 Score = 32.3 bits (72), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +1 Query: 448 FRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLL 627 F D+ ++ L E + F P+ + + C++H AG D+ + L L Sbjct: 541 FPKATDKTFVEKLVQEQ-GSHSKFQKPRQLKDKADFCIIHYAGKVDYKADEWLMKNMDPL 599 Query: 628 KDNIATMVLES 660 DN+AT++ +S Sbjct: 600 NDNVATLLHQS 610
>Q27991:MYH10_BOVIN Myosin-10 - Bos taurus (Bovine)| Length = 1976 Score = 32.3 bits (72), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +1 Query: 448 FRTTCDERLIDALPPESHNARVAFLTPKDVSPEKMACVVHLAGTGDHSFERRLRLGGPLL 627 F D+ ++ L E + F P+ + + C++H AG D+ + L L Sbjct: 541 FPKATDKTFVEKLVQEQ-GSHSKFQKPRQLKDKADFCIIHYAGKVDYKADEWLMKNMDPL 599 Query: 628 KDNIATMVLES 660 DN+AT++ +S Sbjct: 600 NDNVATLLHQS 610
>Q8PDD1:GLGB2_XANCP 1,4-alpha-glucan-branching enzyme 2 - Xanthomonas campestris pv.| campestris Length = 729 Score = 32.3 bits (72), Expect = 5.4 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 1133 QRMTVIFLDTRSWSSRRHGRAQKSGG*WEAMCP 1231 QR+ V+ D W RRH Q+SGG WE + P Sbjct: 150 QRVAVVG-DFNGWEPRRHPMRQRSGGIWELVLP 181
>Q4UZL7:GLGB2_XANC8 1,4-alpha-glucan-branching enzyme 2 - Xanthomonas campestris pv.| campestris (strain 8004) Length = 729 Score = 32.3 bits (72), Expect = 5.4 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 1133 QRMTVIFLDTRSWSSRRHGRAQKSGG*WEAMCP 1231 QR+ V+ D W RRH Q+SGG WE + P Sbjct: 150 QRVAVVG-DFNGWEPRRHPMRQRSGGIWELVLP 181
>P42786:PIP_NEIGO Proline iminopeptidase - Neisseria gonorrhoeae| Length = 310 Score = 32.0 bits (71), Expect = 7.0 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 1153 PRHSVMELQKAWPGSEVRWVMGGHVSSFLLHNDSFRKAIVDALDRL 1290 P S EL KA+P +E+R V GH + D+ +A+ D L RL Sbjct: 264 PMQSAWELSKAFPEAELRVVQAGHCAFDPPLADALVQAVEDILPRL 309
>Q8IZY2:ABCA7_HUMAN ATP-binding cassette sub-family A member 7 - Homo sapiens (Human)| Length = 2146 Score = 32.0 bits (71), Expect = 7.0 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Frame = +1 Query: 1093 PLPKNPQAVIFVGATDDGYIPRHSVMELQKAWPGSEVRWVMG-------GHVSSFLLHND 1251 P P +P+ + V G P SV L+K +PGS + G GH+++FL HN Sbjct: 787 PTPLDPK--VLVEEAPPGLSPGVSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNG 844 Query: 1252 SFRKAIVDALDRL 1290 + + + L L Sbjct: 845 AGKTTTLSILSGL 857 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 284,936,170 Number of extensions: 6603323 Number of successful extensions: 17528 Number of sequences better than 10.0: 19 Number of HSP's gapped: 17515 Number of HSP's successfully gapped: 19 Length of query: 502 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 385 Effective length of database: 68,593,924 Effective search space: 26408660740 Effective search space used: 26408660740 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
