| Clone Name | FLbaf31a24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052718.1| Oryza sativa (japonica cultivar-group) Os02g0195000 (Os02g0195000) mRNA, complete cds Length = 1735 Score = 989 bits (499), Expect = 0.0 Identities = 954/1106 (86%), Gaps = 6/1106 (0%) Strand = Plus / Plus Query: 197 atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256 |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| || Sbjct: 393 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 452 Query: 257 tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 453 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 512 Query: 317 ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376 ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct: 513 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 572 Query: 377 caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436 |||||||||| ||||| || | |||||||| |||||||||||||||| |||||||||| Sbjct: 573 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 632 Query: 437 gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496 |||||||||||||| |||| ||||| ||| | |||||||| |||||||||||||||| Sbjct: 633 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 692 Query: 497 gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556 |||||||||||||||||||||||||||| || ||| || ||||| ||||||||||| | Sbjct: 693 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 752 Query: 557 gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616 | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| | Sbjct: 753 gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 812 Query: 617 gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 813 gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 872 Query: 677 gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736 | || || ||||||||||||||| | |||||||| |||||||||||||||||||| |||| Sbjct: 873 ggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtgagtgacttgctactattag 932 Query: 737 gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796 ||||||| |||||||||||||||||||| || | |||||||||||| ||||||||||| Sbjct: 933 gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 992 Query: 797 atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 993 atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 1052 Query: 857 ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916 ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| | Sbjct: 1053 ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1112 Query: 917 ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976 |||||||||| || || ||||| ||||||||||||||||| ||| |||| ||||||||| Sbjct: 1113 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1172 Query: 977 cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030 || |||| || |||| | |||||||||| | ||||| ||| ||| ||||||| Sbjct: 1173 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1232 Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090 ||||||||||||||| ||| || || || |||||||| ||| |||| ||||||||||| | Sbjct: 1233 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcactcgat 1292 Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150 |||| | || ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 1293 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1352 Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210 | || | ||| ||| | ||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 1353 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1412 Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270 | | ||||| || || || || ||||| |||||||||||| |||||||||||||||| | Sbjct: 1413 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1472 Query: 1271 tcgatgcccttgacagattataacag 1296 | ||||| ||||| ||| |||||||| Sbjct: 1473 ttgatgctcttgatagactataacag 1498
>dbj|AK102395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H01, full insert sequence Length = 1650 Score = 989 bits (499), Expect = 0.0 Identities = 954/1106 (86%), Gaps = 6/1106 (0%) Strand = Plus / Plus Query: 197 atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256 |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| || Sbjct: 322 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 381 Query: 257 tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 382 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 441 Query: 317 ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376 ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct: 442 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 501 Query: 377 caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436 |||||||||| ||||| || | |||||||| |||||||||||||||| |||||||||| Sbjct: 502 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 561 Query: 437 gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496 |||||||||||||| |||| ||||| ||| | |||||||| |||||||||||||||| Sbjct: 562 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 621 Query: 497 gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556 |||||||||||||||||||||||||||| || ||| || ||||| ||||||||||| | Sbjct: 622 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 681 Query: 557 gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616 | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| | Sbjct: 682 gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 741 Query: 617 gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 742 gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 801 Query: 677 gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736 | || || ||||||||||||||| | |||||||| |||||||||||||||||||| |||| Sbjct: 802 ggcgaccaagcatgcagcatgggtcgaagcttcagtgtgtgagtgacttgctactattag 861 Query: 737 gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796 ||||||| |||||||||||||||||||| || | |||||||||||| ||||||||||| Sbjct: 862 gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 921 Query: 797 atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 922 atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 981 Query: 857 ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916 ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| | Sbjct: 982 ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1041 Query: 917 ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976 |||||||||| || || ||||| ||||||||||||||||| ||| |||| ||||||||| Sbjct: 1042 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1101 Query: 977 cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030 || |||| || |||| | |||||||||| | ||||| ||| ||| ||||||| Sbjct: 1102 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1161 Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090 ||||||||||||||| ||| || || || |||||||| ||| |||| ||||||||||| | Sbjct: 1162 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcactcgat 1221 Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150 |||| | || ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 1222 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1281 Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210 | || | ||| ||| | ||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 1282 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1341 Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270 | | ||||| || || || || ||||| |||||||||||| |||||||||||||||| | Sbjct: 1342 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1401 Query: 1271 tcgatgcccttgacagattataacag 1296 | ||||| ||||| ||| |||||||| Sbjct: 1402 ttgatgctcttgatagactataacag 1427
>dbj|AK109481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B01, full insert sequence Length = 1735 Score = 965 bits (487), Expect = 0.0 Identities = 951/1106 (85%), Gaps = 6/1106 (0%) Strand = Plus / Plus Query: 197 atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256 |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| || Sbjct: 393 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 452 Query: 257 tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 453 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 512 Query: 317 ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376 ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct: 513 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 572 Query: 377 caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436 |||||||||| ||||| || | |||||||| |||||||||||||||| |||||||||| Sbjct: 573 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 632 Query: 437 gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496 ||||||| |||||| |||| ||||| ||| | |||||||| |||||||||||||||| Sbjct: 633 gagagggcgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 692 Query: 497 gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556 |||||||||||||||||||||||||||| || ||| || ||||| ||||||||||| | Sbjct: 693 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 752 Query: 557 gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616 | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| | Sbjct: 753 gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 812 Query: 617 gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 813 gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 872 Query: 677 gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736 | || || |||| |||||||||| | |||||||| |||||||||||||||||||| |||| Sbjct: 873 ggcgaccaagcacgcagcatgggtcaaagcttcagtgtgtgagtgacttgctactattag 932 Query: 737 gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796 ||||||| |||||||||||||||||||| || | |||||||||||| ||||||||||| Sbjct: 933 gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 992 Query: 797 atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 993 atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 1052 Query: 857 ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916 ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| | Sbjct: 1053 ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1112 Query: 917 ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976 |||||||||| || || ||||| ||||||||||||||||| ||| |||| ||||||||| Sbjct: 1113 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1172 Query: 977 cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030 || |||| || |||| | |||||||||| | ||||| ||| ||| ||||||| Sbjct: 1173 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1232 Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090 ||||||||||||||| ||| || || || |||||||| ||| |||| |||||||| || | Sbjct: 1233 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcacccgat 1292 Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150 |||| | || ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 1293 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1352 Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210 | || | ||| ||| | ||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 1353 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1412 Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270 | | ||||| || || || || ||||| |||||||||||| |||||||||||||||| | Sbjct: 1413 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1472 Query: 1271 tcgatgcccttgacagattataacag 1296 | ||||| ||||| ||| |||||||| Sbjct: 1473 ttgatgctcttgatagactataacag 1498
>gb|BT018604.1| Zea mays clone EL01N0450B01.d mRNA sequence Length = 1450 Score = 729 bits (368), Expect = 0.0 Identities = 690/796 (86%), Gaps = 1/796 (0%) Strand = Plus / Plus Query: 199 atggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactctc 258 |||||||| || ||| |||||||||| ||||||||| ||||||| |||||||| || || Sbjct: 22 atggtatcagttaatcttgggttagttcattatgtactggaccacatatatggaacactt 81 Query: 259 cttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaactt 318 ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 82 cttcatcgcaccaaactaggaacaccatttttctcaaaaggatggggaggtaccaaactt 141 Query: 319 gatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggcca 378 |||||| |||||| ||||||||||||| | || || || || | |||||| | ||||||| Sbjct: 142 gatttgctagagaagatggtgaagcagttgtttcccgaggcacgttgccaaaactggcca 201 Query: 379 ccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgcga 438 ||||||||||||||||| | ||||||||||| ||||||||||| || |||||||||||| Sbjct: 202 ccaactgctgtgcagccaatgtggaaaacagtatgggagacaaacaattcttgtctgcga 261 Query: 439 gagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgagagt 498 || || |||||| |||| |||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 262 gaaggagttttcaggactacatgtgatgagcgactaatcgatgcattgccacctgagagt 321 Query: 499 cacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggcttgc 558 |||||||||||||||||||||||||| || || |||| |||| ||||||||| | || Sbjct: 322 cacaatgcaagagttgcttttcttacccctaaaaatgttacacctgagaagatgtcatgt 381 Query: 559 gtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcgga 618 ||||||||| | |||||||| ||||||||| |||||||| | ||||| ||||| || || Sbjct: 382 gtggtccatcttgcaggcactggtgatcacacatttgagcgcaggcttcggctgggtggg 441 Query: 619 cctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaacga 678 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 442 cctcttcttaagaacaatattgcaactatggttcttgagagcccctattatggacagcga 501 Query: 679 cgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttagga 738 |||||||||||||||| ||| || ||||| || ||||| ||||| || |||| |||| Sbjct: 502 cgtcctagcatgcagcgtggtgcaaagctccagtgtgttagtgatctgttacttctaggg 561 Query: 739 aaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggttat 798 |||||||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| Sbjct: 562 aaagccacaattgatgaagctcgcagtctcctgtactggctgcagaatgaggctggttac 621 Query: 799 ggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggatcc 858 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 622 ggcaagatgggcatatgtgggctcagcatgggtggagtacatgctgcgatggtgggatcc 681 Query: 859 ttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtacct 918 |||||||||| ||| |||||||||| |||||||| ||| |||| ||||||||||||||| Sbjct: 682 ctgcatcctactccagttgccacactgccatttctcgct-cacactctgctgtggtacct 740 Query: 919 ttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcagca 978 |||||||||| | |||| | | |||||||||||||| || ||||| || |||| ||| Sbjct: 741 ttctgtgaagcgttctacaaatacgccacagcttgggacgctttgagaaaacatgctgca 800 Query: 979 gcattagctaaagatg 994 | |||| || |||||| Sbjct: 801 gtattaactcaagatg 816 Score = 202 bits (102), Expect = 3e-48 Identities = 207/242 (85%) Strand = Plus / Plus Query: 1054 ttacggtcagtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacag 1113 |||||||||||| | ||| |||| || |||||||| ||||| | || ||||| |||||| Sbjct: 882 ttacggtcagtgttgtctttgactgatgtcactcgatttccagtcccaaagaacccacag 941 Query: 1114 gccgtcatttttgttggtgcaacggatgacggttatattcctagacactcggtcatggag 1173 || ||||| ||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 942 gcggtcatctttgttggtgcaacggacgatggttatattcccagacattcagtgatggag 1001 Query: 1174 ctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtgtcctct 1233 ||||||||||||||||| |||||||| ||||||||||| | || |||||||| |||||| Sbjct: 1002 ctccagaaggcatggccaggctcagaggtccggtgggtaacaggtggccatgtctcctct 1061 Query: 1234 tttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacagattataa 1293 || || ||||||||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 1062 ttcttcctccacaacgatgcattccgcaaggccatcgtcgacgcccttgatagattgtaa 1121 Query: 1294 ca 1295 || Sbjct: 1122 ca 1123
>gb|AY107594.1| Zea mays PCO118980 mRNA sequence Length = 1045 Score = 676 bits (341), Expect = 0.0 Identities = 632/729 (86%), Gaps = 1/729 (0%) Strand = Plus / Plus Query: 199 atggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactctc 258 |||||||| || ||| |||||||||| ||||||||| ||||||| |||||||| || || Sbjct: 197 atggtatcagttaatcttgggttagttcattatgtactggaccacatatatggaacactt 256 Query: 259 cttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaactt 318 ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 257 cttcatcgcaccaaactaggaacaccatttttctcaaaaggatggggaggtaccaaactt 316 Query: 319 gatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggcca 378 |||||| |||||| ||||||||||||| | || || || || | |||||| | ||||||| Sbjct: 317 gatttgctagagaagatggtgaagcagttgtttcccgaggcacgttgccaaaactggcca 376 Query: 379 ccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgcga 438 ||||||||||||||||| | ||||||||||| ||||||||||| || |||||||||||| Sbjct: 377 ccaactgctgtgcagccaatgtggaaaacagtatgggagacaaacaattcttgtctgcga 436 Query: 439 gagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgagagt 498 || || |||||| |||| |||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 437 gaaggagttttcaggactacatgtgatgagcgactaatcgatgcattgccacctgagagt 496 Query: 499 cacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggcttgc 558 |||||||||||||||||||||||||| || || |||| |||| ||||||||| | || Sbjct: 497 cacaatgcaagagttgcttttcttacccctaaaaatgttacacctgagaagatgtcatgt 556 Query: 559 gtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcgga 618 ||||||||| | |||||||| ||||||||| |||||||| | ||||| ||||| || || Sbjct: 557 gtggtccatcttgcaggcactggtgatcacacatttgagcgcaggcttcggctgggtggg 616 Query: 619 cctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaacga 678 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 617 cctcttcttaagaacaatattgcaactatggttcttgagagcccctattatggacagcga 676 Query: 679 cgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttagga 738 |||||||||||||||| ||| || ||||| || ||||| ||||| || |||| |||| Sbjct: 677 cgtcctagcatgcagcgtggtgcaaagctccagtgtgttagtgatctgttacttctaggg 736 Query: 739 aaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggttat 798 |||||||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| Sbjct: 737 aaagccacaattgatgaagctcgcagtctcctgtactggctgcagaatgaggctggttac 796 Query: 799 ggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggatcc 858 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| | Sbjct: 797 ggcaagatgggcatatgtgggctcagcatgggtggagtacatgctgcgatggtgggannc 856 Query: 859 ttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtacct 918 |||||||||| ||| |||||||||| || |||| | |||| | ||||||| || |||| Sbjct: 857 ctgcatcctactccagttgccacactggca-ttctcgntccaaactctgctgngggacct 915 Query: 919 ttctgtgaa 927 ||||||||| Sbjct: 916 ttctgtgaa 924
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 355 bits (179), Expect = 3e-94 Identities = 329/379 (86%) Strand = Plus / Minus Query: 197 atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256 |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| || Sbjct: 5327152 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 5327093 Query: 257 tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 5327092 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 5327033 Query: 317 ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376 ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct: 5327032 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 5326973 Query: 377 caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436 |||||||||| ||||| || | |||||||| |||||||||||||||| |||||||||| Sbjct: 5326972 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 5326913 Query: 437 gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496 |||||||||||||| |||| ||||| ||| | |||||||| |||||||||||||||| Sbjct: 5326912 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 5326853 Query: 497 gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556 |||||||||||||||||||||||||||| || ||| || ||||| ||||||||||| | Sbjct: 5326852 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 5326793 Query: 557 gcgtggtccatttggcagg 575 | ||| | ||| ||||||| Sbjct: 5326792 gtgtgattcatctggcagg 5326774 Score = 224 bits (113), Expect = 7e-55 Identities = 265/316 (83%), Gaps = 6/316 (1%) Strand = Plus / Minus Query: 829 ggtggcgtacatgctgcaatggtaggatccttgcatcctacgccaattgccacactacca 888 ||||| ||||||||||||||||| ||||||||||| || || |||||||| || || ||| Sbjct: 5325643 ggtggtgtacatgctgcaatggttggatccttgcacccaacaccaattgctacgctgcca 5325584 Query: 889 tttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgccaca 948 ||||||||||| |||||||||||||| ||||||||||| || || ||||| ||||||||| Sbjct: 5325583 tttcttgctccgcattctgctgtggtgcctttctgtgacgggctctacaggcatgccaca 5325524 Query: 949 gcttgggaagcactgagagaagatgcagcagcattagctaaagatgcaacttctttgtcc 1008 |||||||| ||| |||| ||||||||||| |||| || |||| | |||||||||| | Sbjct: 5325523 gcttgggatgcattgaggaaagatgcagcaacattggcccaagacgtaacttctttgaca 5325464 Query: 1009 gaagatgcggc------atccggaatcactattgagcaagtaaaagacagattacggtca 1062 ||||| ||| ||| |||||||||||||||||||||| ||| || || || ||| Sbjct: 5325463 gaagacatggcccagaaatcaggaatcactattgagcaagtaagagagaggttgcgatca 5325404 Query: 1063 gtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacaggccgtcatt 1122 ||||| ||| |||| ||||||||||| ||||| | || ||||| |||||||| |||||| Sbjct: 5325403 gtgctgtctttgactgacgtcactcgatttccagtgccaaagaacccacaggctgtcatt 5325344 Query: 1123 tttgttggtgcaacgg 1138 |||||||||||||||| Sbjct: 5325343 tttgttggtgcaacgg 5325328 Score = 218 bits (110), Expect = 4e-53 Identities = 158/174 (90%) Strand = Plus / Minus Query: 658 agcccctattatggacaacgacgtcctagcatgcagcatggggccaagcttcaatgtgtg 717 ||||| |||||||||||||| || || ||||||||||||||| | |||||||| |||||| Sbjct: 5326247 agcccttattatggacaacggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtg 5326188 Query: 718 agtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctcttatactgg 777 |||||||||||||| ||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 5326187 agtgacttgctactattaggaaaagctactattgatgaagctcgcagccttctgtactgg 5326128 Query: 778 ttgcaggctgaggctggttatggcaagatgggcatatgtgggctcagcatgggt 831 |||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5326127 ttgcagaatgaggctggttatggcaagatgggcatatgcgggctcagcatgggt 5326074 Score = 111 bits (56), Expect = 7e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 572 caggcaccggtgatcactcatttgagagaaggctacggcttggcggacctcttttgaagg 631 ||||||| ||||||||||| ||||||||||| || || ||||| |||||||||||||||| Sbjct: 5326434 caggcactggtgatcactcgtttgagagaagacttcgacttggtggacctcttttgaagg 5326375 Query: 632 acaatattgcaaccatggttcttgagag 659 |||| |||||||| |||||||||||||| Sbjct: 5326374 acaacattgcaactatggttcttgagag 5326347 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 1168 atggagctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtg 1227 ||||||||||| ||||||||||| || ||||| ||||||||||| | ||||| || || Sbjct: 5324932 atggagctccaaaaggcatggccaggttcagaggtccggtgggtaaccggagggcacgta 5324873 Query: 1228 tcctcttttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacaga 1287 || || ||||| |||||||||||| |||||||||||||||| || ||||| ||||| ||| Sbjct: 5324872 tcgtcgtttttcctccacaacgacgcgtttcgcaaggccattgttgatgctcttgataga 5324813 Query: 1288 ttataacag 1296 |||||||| Sbjct: 5324812 ctataacag 5324804
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 355 bits (179), Expect = 3e-94 Identities = 329/379 (86%) Strand = Plus / Minus Query: 197 atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256 |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| || Sbjct: 53455 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 53396 Query: 257 tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 53395 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 53336 Query: 317 ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376 ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct: 53335 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 53276 Query: 377 caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436 |||||||||| ||||| || | |||||||| |||||||||||||||| |||||||||| Sbjct: 53275 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 53216 Query: 437 gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496 |||||||||||||| |||| ||||| ||| | |||||||| |||||||||||||||| Sbjct: 53215 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 53156 Query: 497 gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556 |||||||||||||||||||||||||||| || ||| || ||||| ||||||||||| | Sbjct: 53155 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 53096 Query: 557 gcgtggtccatttggcagg 575 | ||| | ||| ||||||| Sbjct: 53095 gtgtgattcatctggcagg 53077 Score = 224 bits (113), Expect = 7e-55 Identities = 265/316 (83%), Gaps = 6/316 (1%) Strand = Plus / Minus Query: 829 ggtggcgtacatgctgcaatggtaggatccttgcatcctacgccaattgccacactacca 888 ||||| ||||||||||||||||| ||||||||||| || || |||||||| || || ||| Sbjct: 51946 ggtggtgtacatgctgcaatggttggatccttgcacccaacaccaattgctacgctgcca 51887 Query: 889 tttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgccaca 948 ||||||||||| |||||||||||||| ||||||||||| || || ||||| ||||||||| Sbjct: 51886 tttcttgctccgcattctgctgtggtgcctttctgtgacgggctctacaggcatgccaca 51827 Query: 949 gcttgggaagcactgagagaagatgcagcagcattagctaaagatgcaacttctttgtcc 1008 |||||||| ||| |||| ||||||||||| |||| || |||| | |||||||||| | Sbjct: 51826 gcttgggatgcattgaggaaagatgcagcaacattggcccaagacgtaacttctttgaca 51767 Query: 1009 gaagatgcggc------atccggaatcactattgagcaagtaaaagacagattacggtca 1062 ||||| ||| ||| |||||||||||||||||||||| ||| || || || ||| Sbjct: 51766 gaagacatggcccagaaatcaggaatcactattgagcaagtaagagagaggttgcgatca 51707 Query: 1063 gtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacaggccgtcatt 1122 ||||| ||| |||| ||||||||||| ||||| | || ||||| |||||||| |||||| Sbjct: 51706 gtgctgtctttgactgacgtcactcgatttccagtgccaaagaacccacaggctgtcatt 51647 Query: 1123 tttgttggtgcaacgg 1138 |||||||||||||||| Sbjct: 51646 tttgttggtgcaacgg 51631 Score = 218 bits (110), Expect = 4e-53 Identities = 158/174 (90%) Strand = Plus / Minus Query: 658 agcccctattatggacaacgacgtcctagcatgcagcatggggccaagcttcaatgtgtg 717 ||||| |||||||||||||| || || ||||||||||||||| | |||||||| |||||| Sbjct: 52550 agcccttattatggacaacggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtg 52491 Query: 718 agtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctcttatactgg 777 |||||||||||||| ||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 52490 agtgacttgctactattaggaaaagctactattgatgaagctcgcagccttctgtactgg 52431 Query: 778 ttgcaggctgaggctggttatggcaagatgggcatatgtgggctcagcatgggt 831 |||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52430 ttgcagaatgaggctggttatggcaagatgggcatatgcgggctcagcatgggt 52377 Score = 111 bits (56), Expect = 7e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 572 caggcaccggtgatcactcatttgagagaaggctacggcttggcggacctcttttgaagg 631 ||||||| ||||||||||| ||||||||||| || || ||||| |||||||||||||||| Sbjct: 52737 caggcactggtgatcactcgtttgagagaagacttcgacttggtggacctcttttgaagg 52678 Query: 632 acaatattgcaaccatggttcttgagag 659 |||| |||||||| |||||||||||||| Sbjct: 52677 acaacattgcaactatggttcttgagag 52650 Score = 105 bits (53), Expect = 5e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 1168 atggagctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtg 1227 ||||||||||| ||||||||||| || ||||| ||||||||||| | ||||| || || Sbjct: 51235 atggagctccaaaaggcatggccaggttcagaggtccggtgggtaaccggagggcacgta 51176 Query: 1228 tcctcttttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacaga 1287 || || ||||| |||||||||||| |||||||||||||||| || ||||| ||||| ||| Sbjct: 51175 tcgtcgtttttcctccacaacgacgcgtttcgcaaggccattgttgatgctcttgataga 51116 Query: 1288 ttataacag 1296 |||||||| Sbjct: 51115 ctataacag 51107
>gb|AY112416.1| Zea mays CL8338_1 mRNA sequence Length = 827 Score = 147 bits (74), Expect = 1e-31 Identities = 137/158 (86%) Strand = Plus / Minus Query: 1054 ttacggtcagtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacag 1113 |||||||||||| | ||| |||| || |||||||| ||||| | || ||||| |||||| Sbjct: 646 ttacggtcagtgttgtctttgactgatgtcactcgatttccagtcccaaagaacccacag 587 Query: 1114 gccgtcatttttgttggtgcaacggatgacggttatattcctagacactcggtcatggag 1173 || ||||| ||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 586 gcggtcatctttgttggtgcaacggacgatggttatattcccagacattcagtgatggag 527 Query: 1174 ctccagaaggcatggccgggctcagaagtccggtgggt 1211 ||||||||||||||||| |||||||| ||||||||||| Sbjct: 526 ctccagaaggcatggccaggctcagaggtccggtgggt 489 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Minus Query: 886 ccatttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgcc 945 |||||||| |||||||| |||||||||||||||||||||||||| | |||| | | ||| Sbjct: 820 ccatttctcgctccacactctgctgtggtacctttctgtgaaggggtctacaaatacgcc 761 Query: 946 acagcttgggaagcactgagagaagatgcagcagcattagctaaagatg 994 ||||||||||| || ||||| ||||||| |||| |||| || |||||| Sbjct: 760 acagcttgggacgctttgagaaaagatgctgcagtattaactcaagatg 712 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1258 cgcaaggccatcgtcgatgcccttgacagattataaca 1295 ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 442 cgcaaggccatcgtcgacgcccttgatagattgtaaca 405
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 tgcattgcctcctgagagtcacaatgcaagagttgcttttctta 523 ||||||||| ||||||||||||| ||| || ||||||||||||| Sbjct: 2523 tgcattgccacctgagagtcacattgctagggttgcttttctta 2480 Score = 52.0 bits (26), Expect = 0.006 Identities = 80/98 (81%) Strand = Plus / Minus Query: 712 tgtgtgagtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctctta 771 ||||| ||||||||||| || ||||||| ||| || ||||| || || |||||||| ||| Sbjct: 1054 tgtgtcagtgacttgcttctattaggaagagcaaccattgaagaggcacgcagtctgtta 995 Query: 772 tactggttgcaggctgaggctggttatggcaagatggg 809 |||||||| | |||||| |||| ||||||||||| Sbjct: 994 cactggttggactttgaggcaggtttcggcaagatggg 957 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Minus Query: 626 tgaaggacaatattgcaaccatggttcttgagag 659 ||||||| || ||||||||||||||||||||||| Sbjct: 1250 tgaaggaaaacattgcaaccatggttcttgagag 1217 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 280 acaccatttttctcaaagggatggggaggtaccaaact 317 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 2723 acaccatttttctcaagaggatggggtggtacaaaact 2686
>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence Length = 154095 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 480 tgcattgcctcctgagagtcacaatgcaagagttgcttttctta 523 ||||||||| ||||||||||||| ||| || ||||||||||||| Sbjct: 143976 tgcattgccacctgagagtcacattgctagggttgcttttctta 143933 Score = 52.0 bits (26), Expect = 0.006 Identities = 80/98 (81%) Strand = Plus / Minus Query: 712 tgtgtgagtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctctta 771 ||||| ||||||||||| || ||||||| ||| || ||||| || || |||||||| ||| Sbjct: 142507 tgtgtcagtgacttgcttctattaggaagagcaaccattgaagaggcacgcagtctgtta 142448 Query: 772 tactggttgcaggctgaggctggttatggcaagatggg 809 |||||||| | |||||| |||| ||||||||||| Sbjct: 142447 cactggttggactttgaggcaggtttcggcaagatggg 142410 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Minus Query: 626 tgaaggacaatattgcaaccatggttcttgagag 659 ||||||| || ||||||||||||||||||||||| Sbjct: 142703 tgaaggaaaacattgcaaccatggttcttgagag 142670 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 280 acaccatttttctcaaagggatggggaggtaccaaact 317 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 144176 acaccatttttctcaagaggatggggtggtacaaaact 144139
>ref|NM_001057864.1| Oryza sativa (japonica cultivar-group) Os03g0758000 (Os03g0758000) mRNA, complete cds Length = 1276 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 atccccgcgccgccttcctcgc 106 |||||||||||||||||||||| Sbjct: 214 atccccgcgccgccttcctcgc 193
>tpg|BK005006.1| TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 3 (WRKY3) gene, complete cds Length = 3406 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 atccccgcgccgccttcctcgc 106 |||||||||||||||||||||| Sbjct: 119 atccccgcgccgccttcctcgc 98
>gb|AY359555.1| Callinectes sapidus clone CSA-016 microsatellite sequence Length = 254 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1289 tataacagggtgattcttgtgt 1310 |||||||||||||||||||||| Sbjct: 54 tataacagggtgattcttgtgt 75
>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20 map S2137, complete sequence Length = 125303 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 90 cgcgccgccttcctcgcgccgccgcg 115 |||||||||||| ||||||||||||| Sbjct: 16222 cgcgccgccttcgtcgcgccgccgcg 16247
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 90 cgcgccgccttcctcgcgccgccgcg 115 |||||||||||| ||||||||||||| Sbjct: 194419 cgcgccgccttcgtcgcgccgccgcg 194444
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 atccccgcgccgccttcctcgc 106 |||||||||||||||||||||| Sbjct: 73273 atccccgcgccgccttcctcgc 73252
>gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds Length = 1276 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 atccccgcgccgccttcctcgc 106 |||||||||||||||||||||| Sbjct: 214 atccccgcgccgccttcctcgc 193
>ref|NM_059805.3| Caenorhabditis elegans C54G4.7 (C54G4.7) mRNA, complete cds Length = 1744 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 565 catttggcaggcaccggtgatcactc 590 ||||||||||||||||| |||||||| Sbjct: 724 catttggcaggcaccggagatcactc 749
>emb|Z75533.1|CEC54G4 Caenorhabditis elegans Cosmid C54G4, complete sequence Length = 34743 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 565 catttggcaggcaccggtgatcactc 590 ||||||||||||||||| |||||||| Sbjct: 28857 catttggcaggcaccggagatcactc 28882
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 90 cgcgccgccttcctcgcgccgccgcg 115 |||||||||||| ||||||||||||| Sbjct: 8113920 cgcgccgccttcgtcgcgccgccgcg 8113945
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 atccccgcgccgccttcctcgc 106 |||||||||||||||||||||| Sbjct: 31113314 atccccgcgccgccttcctcgc 31113335
>emb|BX957220.1| Methanococcus maripaludis S2 complete genome; segment 2/5 Length = 349648 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 taattgatgcattgcctcctga 494 |||||||||||||||||||||| Sbjct: 285258 taattgatgcattgcctcctga 285279
>ref|NM_112050.2| Arabidopsis thaliana unknown protein (AT3G12150) mRNA, complete cds Length = 1652 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587 ||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 640 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 680
>gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome 9, complete sequence Length = 171723 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1107 tccacaggccgtcatttttgt 1127 ||||||||||||||||||||| Sbjct: 25139 tccacaggccgtcatttttgt 25159
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1428 ttggattaaacaagtggtaga 1448 ||||||||||||||||||||| Sbjct: 88394 ttggattaaacaagtggtaga 88374
>gb|BT008851.1| Arabidopsis thaliana At3g12156 mRNA, complete cds Length = 1092 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587 ||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 361 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 401
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1029 cactattgagcaagtaaaaga 1049 ||||||||||||||||||||| Sbjct: 1153187 cactattgagcaagtaaaaga 1153207
>dbj|AK019319.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019G12 product:apolipoprotein E, full insert sequence Length = 844 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1107 tccacaggccgtcatttttgt 1127 ||||||||||||||||||||| Sbjct: 27 tccacaggccgtcatttttgt 7
>gb|AY093234.1| Arabidopsis thaliana unknown protein (At3g12150) mRNA, complete cds Length = 1643 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587 ||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 650 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 690
>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence Length = 217921 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 aaattaggaacaccatttttc 291 ||||||||||||||||||||| Sbjct: 126239 aaattaggaacaccatttttc 126259
>gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complete sequence Length = 167132 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 caacatgtgatgagagactaa 475 ||||||||||||||||||||| Sbjct: 60264 caacatgtgatgagagactaa 60284
>gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, complete sequence Length = 242531 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1107 tccacaggccgtcatttttgt 1127 ||||||||||||||||||||| Sbjct: 103950 tccacaggccgtcatttttgt 103930
>gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, complete sequence Length = 182452 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gaaaacagtttgggagacaaa 422 ||||||||||||||||||||| Sbjct: 179372 gaaaacagtttgggagacaaa 179392
>ref|NM_200666.1| Danio rerio ilvB (bacterial acetolactate synthase)-like (ilvbl), mRNA gb|BC057527.1| Danio rerio ilvB (bacterial acetolactate synthase)-like, mRNA (cDNA clone MGC:66376 IMAGE:5612706), complete cds Length = 2981 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 acaatgcaagagttgcttttcttac 524 |||||||||||| |||||||||||| Sbjct: 2543 acaatgcaagaggtgcttttcttac 2567
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gaaaacagtttgggagacaaa 422 ||||||||||||||||||||| Sbjct: 46788 gaaaacagtttgggagacaaa 46808 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 255,963,153 Number of extensions: 12613191 Number of successful extensions: 224885 Number of sequences better than 10.0: 35 Number of HSP's gapped: 224877 Number of HSP's successfully gapped: 57 Length of query: 1507 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1484 Effective length of database: 18,503,978,556 Effective search space: 27459904177104 Effective search space used: 27459904177104 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)