ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31a24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001052718.1| Oryza sativa (japonica cultivar-group) Os02g... 989 0.0
2dbj|AK102395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 989 0.0
3dbj|AK109481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 965 0.0
4gb|BT018604.1| Zea mays clone EL01N0450B01.d mRNA sequence 729 0.0
5gb|AY107594.1| Zea mays PCO118980 mRNA sequence 676 0.0
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 355 3e-94
7dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 355 3e-94
8gb|AY112416.1| Zea mays CL8338_1 mRNA sequence 147 1e-31
9gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete se... 56 4e-04
10gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1... 56 4e-04
11ref|NM_001057864.1| Oryza sativa (japonica cultivar-group) Os03g... 44 1.5
12tpg|BK005006.1| TPA_inf: Oryza sativa (japonica cultivar-group) ... 44 1.5
13gb|AY359555.1| Callinectes sapidus clone CSA-016 microsatellite ... 44 1.5
14gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome... 44 1.5
15gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome... 44 1.5
16gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 44 1.5
17gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRN... 44 1.5
18ref|NM_059805.3| Caenorhabditis elegans C54G4.7 (C54G4.7) mRNA, ... 44 1.5
19emb|Z75533.1|CEC54G4 Caenorhabditis elegans Cosmid C54G4, comple... 44 1.5
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.5
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.5
22emb|BX957220.1| Methanococcus maripaludis S2 complete genome; se... 44 1.5
23ref|NM_112050.2| Arabidopsis thaliana unknown protein (AT3G12150... 42 5.7
24gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome... 42 5.7
25dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 42 5.7
26gb|BT008851.1| Arabidopsis thaliana At3g12156 mRNA, complete cds 42 5.7
27dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 42 5.7
28dbj|AK019319.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 42 5.7
29gb|AY093234.1| Arabidopsis thaliana unknown protein (At3g12150) ... 42 5.7
30gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complet... 42 5.7
31gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complet... 42 5.7
32gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, co... 42 5.7
33gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, comple... 42 5.7
34ref|NM_200666.1| Danio rerio ilvB (bacterial acetolactate syntha... 42 5.7
35gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, comple... 42 5.7

>ref|NM_001052718.1| Oryza sativa (japonica cultivar-group) Os02g0195000 (Os02g0195000)
            mRNA, complete cds
          Length = 1735
 Score =  989 bits (499), Expect = 0.0
 Identities = 954/1106 (86%), Gaps = 6/1106 (0%)
 Strand = Plus / Plus

                                                                        
Query: 197  atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256
            |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| ||  
Sbjct: 393  atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 452

                                                                        
Query: 257  tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316
            ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 453  tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 512

                                                                        
Query: 317  ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376
            ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct: 513  ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 572

                                                                        
Query: 377  caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436
            |||||||||| ||||| || |  |||||||| ||||||||||||||||  ||||||||||
Sbjct: 573  caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 632

                                                                        
Query: 437  gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496
            |||||||||||||| |||| ||||| |||    | |||||||| ||||||||||||||||
Sbjct: 633  gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 692

                                                                        
Query: 497  gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556
            |||||||||||||||||||||||||||| || |||   || ||||| ||||||||||| |
Sbjct: 693  gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 752

                                                                        
Query: 557  gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616
            | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| |
Sbjct: 753  gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 812

                                                                        
Query: 617  gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676
            ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 813  gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 872

                                                                        
Query: 677  gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736
            | || || ||||||||||||||| | |||||||| |||||||||||||||||||| ||||
Sbjct: 873  ggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtgagtgacttgctactattag 932

                                                                        
Query: 737  gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796
            ||||||| |||||||||||||||||||| ||  | ||||||||||||  |||||||||||
Sbjct: 933  gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 992

                                                                        
Query: 797  atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 993  atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 1052

                                                                        
Query: 857  ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916
            ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| |
Sbjct: 1053 ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1112

                                                                        
Query: 917  ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976
            |||||||||| || || ||||| ||||||||||||||||| ||| ||||  |||||||||
Sbjct: 1113 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1172

                                                                        
Query: 977  cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030
            || |||| ||  |||| | |||||||||| | |||||   |||      ||| |||||||
Sbjct: 1173 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1232

                                                                        
Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090
            ||||||||||||||| ||| || || || |||||||| ||| |||| ||||||||||| |
Sbjct: 1233 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcactcgat 1292

                                                                        
Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150
            ||||  | || ||||| |||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 1293 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1352

                                                                        
Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210
            | || | ||| ||| | ||||||||||| ||||||||||| || ||||| ||||||||||
Sbjct: 1353 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1412

                                                                        
Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270
            | |  ||||| || || || || ||||| |||||||||||| |||||||||||||||| |
Sbjct: 1413 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1472

                                      
Query: 1271 tcgatgcccttgacagattataacag 1296
            | ||||| ||||| ||| ||||||||
Sbjct: 1473 ttgatgctcttgatagactataacag 1498



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>dbj|AK102395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H01, full
            insert sequence
          Length = 1650

 Score =  989 bits (499), Expect = 0.0
 Identities = 954/1106 (86%), Gaps = 6/1106 (0%)
 Strand = Plus / Plus

                                                                        
Query: 197  atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256
            |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| ||  
Sbjct: 322  atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 381

                                                                        
Query: 257  tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316
            ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 382  tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 441

                                                                        
Query: 317  ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376
            ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct: 442  ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 501

                                                                        
Query: 377  caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436
            |||||||||| ||||| || |  |||||||| ||||||||||||||||  ||||||||||
Sbjct: 502  caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 561

                                                                        
Query: 437  gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496
            |||||||||||||| |||| ||||| |||    | |||||||| ||||||||||||||||
Sbjct: 562  gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 621

                                                                        
Query: 497  gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556
            |||||||||||||||||||||||||||| || |||   || ||||| ||||||||||| |
Sbjct: 622  gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 681

                                                                        
Query: 557  gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616
            | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| |
Sbjct: 682  gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 741

                                                                        
Query: 617  gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676
            ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 742  gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 801

                                                                        
Query: 677  gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736
            | || || ||||||||||||||| | |||||||| |||||||||||||||||||| ||||
Sbjct: 802  ggcgaccaagcatgcagcatgggtcgaagcttcagtgtgtgagtgacttgctactattag 861

                                                                        
Query: 737  gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796
            ||||||| |||||||||||||||||||| ||  | ||||||||||||  |||||||||||
Sbjct: 862  gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 921

                                                                        
Query: 797  atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 922  atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 981

                                                                        
Query: 857  ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916
            ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| |
Sbjct: 982  ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1041

                                                                        
Query: 917  ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976
            |||||||||| || || ||||| ||||||||||||||||| ||| ||||  |||||||||
Sbjct: 1042 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1101

                                                                        
Query: 977  cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030
            || |||| ||  |||| | |||||||||| | |||||   |||      ||| |||||||
Sbjct: 1102 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1161

                                                                        
Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090
            ||||||||||||||| ||| || || || |||||||| ||| |||| ||||||||||| |
Sbjct: 1162 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcactcgat 1221

                                                                        
Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150
            ||||  | || ||||| |||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 1222 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1281

                                                                        
Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210
            | || | ||| ||| | ||||||||||| ||||||||||| || ||||| ||||||||||
Sbjct: 1282 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1341

                                                                        
Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270
            | |  ||||| || || || || ||||| |||||||||||| |||||||||||||||| |
Sbjct: 1342 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1401

                                      
Query: 1271 tcgatgcccttgacagattataacag 1296
            | ||||| ||||| ||| ||||||||
Sbjct: 1402 ttgatgctcttgatagactataacag 1427



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>dbj|AK109481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B01, full
            insert sequence
          Length = 1735

 Score =  965 bits (487), Expect = 0.0
 Identities = 951/1106 (85%), Gaps = 6/1106 (0%)
 Strand = Plus / Plus

                                                                        
Query: 197  atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256
            |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| ||  
Sbjct: 393  atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 452

                                                                        
Query: 257  tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316
            ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 453  tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 512

                                                                        
Query: 317  ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376
            ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct: 513  ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 572

                                                                        
Query: 377  caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436
            |||||||||| ||||| || |  |||||||| ||||||||||||||||  ||||||||||
Sbjct: 573  caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 632

                                                                        
Query: 437  gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496
            ||||||| |||||| |||| ||||| |||    | |||||||| ||||||||||||||||
Sbjct: 633  gagagggcgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 692

                                                                        
Query: 497  gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556
            |||||||||||||||||||||||||||| || |||   || ||||| ||||||||||| |
Sbjct: 693  gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 752

                                                                        
Query: 557  gcgtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcg 616
            | ||| | ||| |||||||||| ||||||||||| ||||||||||| || || ||||| |
Sbjct: 753  gtgtgattcatctggcaggcactggtgatcactcgtttgagagaagacttcgacttggtg 812

                                                                        
Query: 617  gacctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaac 676
            ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 813  gacctcttttgaaggacaacattgcaactatggttcttgagagcccttattatggacaac 872

                                                                        
Query: 677  gacgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttag 736
            | || || |||| |||||||||| | |||||||| |||||||||||||||||||| ||||
Sbjct: 873  ggcgaccaagcacgcagcatgggtcaaagcttcagtgtgtgagtgacttgctactattag 932

                                                                        
Query: 737  gaaaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggtt 796
            ||||||| |||||||||||||||||||| ||  | ||||||||||||  |||||||||||
Sbjct: 933  gaaaagctactattgatgaagctcgcagccttctgtactggttgcagaatgaggctggtt 992

                                                                        
Query: 797  atggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggat 856
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 993  atggcaagatgggcatatgcgggctcagcatgggtggtgtacatgctgcaatggttggat 1052

                                                                        
Query: 857  ccttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtac 916
            ||||||| || || |||||||| || || |||||||||||||| |||||||||||||| |
Sbjct: 1053 ccttgcacccaacaccaattgctacgctgccatttcttgctccgcattctgctgtggtgc 1112

                                                                        
Query: 917  ctttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcag 976
            |||||||||| || || ||||| ||||||||||||||||| ||| ||||  |||||||||
Sbjct: 1113 ctttctgtgacgggctctacaggcatgccacagcttgggatgcattgaggaaagatgcag 1172

                                                                        
Query: 977  cagcattagctaaagatgcaacttctttgtccgaagatgcggc------atccggaatca 1030
            || |||| ||  |||| | |||||||||| | |||||   |||      ||| |||||||
Sbjct: 1173 caacattggcccaagacgtaacttctttgacagaagacatggcccagaaatcaggaatca 1232

                                                                        
Query: 1031 ctattgagcaagtaaaagacagattacggtcagtgctatctctgacggacgtcactcggt 1090
            ||||||||||||||| ||| || || || |||||||| ||| |||| |||||||| || |
Sbjct: 1233 ctattgagcaagtaagagagaggttgcgatcagtgctgtctttgactgacgtcacccgat 1292

                                                                        
Query: 1091 ttcccctaccgaagaatccacaggccgtcatttttgttggtgcaacggatgacggttata 1150
            ||||  | || ||||| |||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 1293 ttccagtgccaaagaacccacaggctgtcatttttgttggtgcaacggatgacggctaca 1352

                                                                        
Query: 1151 ttcctagacactcggtcatggagctccagaaggcatggccgggctcagaagtccggtggg 1210
            | || | ||| ||| | ||||||||||| ||||||||||| || ||||| ||||||||||
Sbjct: 1353 tccccaaacattcgataatggagctccaaaaggcatggccaggttcagaggtccggtggg 1412

                                                                        
Query: 1211 tgatgggaggccatgtgtcctcttttttactccacaacgactcgtttcgcaaggccatcg 1270
            | |  ||||| || || || || ||||| |||||||||||| |||||||||||||||| |
Sbjct: 1413 taaccggagggcacgtatcgtcgtttttcctccacaacgacgcgtttcgcaaggccattg 1472

                                      
Query: 1271 tcgatgcccttgacagattataacag 1296
            | ||||| ||||| ||| ||||||||
Sbjct: 1473 ttgatgctcttgatagactataacag 1498



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>gb|BT018604.1| Zea mays clone EL01N0450B01.d mRNA sequence
          Length = 1450

 Score =  729 bits (368), Expect = 0.0
 Identities = 690/796 (86%), Gaps = 1/796 (0%)
 Strand = Plus / Plus

                                                                       
Query: 199 atggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactctc 258
           |||||||| || ||| |||||||||| ||||||||| ||||||| |||||||| || || 
Sbjct: 22  atggtatcagttaatcttgggttagttcattatgtactggaccacatatatggaacactt 81

                                                                       
Query: 259 cttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaactt 318
           ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 82  cttcatcgcaccaaactaggaacaccatttttctcaaaaggatggggaggtaccaaactt 141

                                                                       
Query: 319 gatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggcca 378
           |||||| |||||| ||||||||||||| | || || || || | |||||| | |||||||
Sbjct: 142 gatttgctagagaagatggtgaagcagttgtttcccgaggcacgttgccaaaactggcca 201

                                                                       
Query: 379 ccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgcga 438
           ||||||||||||||||| |  ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 202 ccaactgctgtgcagccaatgtggaaaacagtatgggagacaaacaattcttgtctgcga 261

                                                                       
Query: 439 gagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgagagt 498
           || || |||||| |||| |||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 262 gaaggagttttcaggactacatgtgatgagcgactaatcgatgcattgccacctgagagt 321

                                                                       
Query: 499 cacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggcttgc 558
           |||||||||||||||||||||||||| || ||  ||||  |||| ||||||||| | || 
Sbjct: 322 cacaatgcaagagttgcttttcttacccctaaaaatgttacacctgagaagatgtcatgt 381

                                                                       
Query: 559 gtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcgga 618
           ||||||||| | |||||||| ||||||||| |||||||| | ||||| ||||| || || 
Sbjct: 382 gtggtccatcttgcaggcactggtgatcacacatttgagcgcaggcttcggctgggtggg 441

                                                                       
Query: 619 cctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaacga 678
           |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 442 cctcttcttaagaacaatattgcaactatggttcttgagagcccctattatggacagcga 501

                                                                       
Query: 679 cgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttagga 738
           |||||||||||||||| ||| || ||||| || ||||| |||||  || ||||  |||| 
Sbjct: 502 cgtcctagcatgcagcgtggtgcaaagctccagtgtgttagtgatctgttacttctaggg 561

                                                                       
Query: 739 aaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggttat 798
           |||||||| ||||||||||||||||||||| | |||||| |||||  |||||||||||| 
Sbjct: 562 aaagccacaattgatgaagctcgcagtctcctgtactggctgcagaatgaggctggttac 621

                                                                       
Query: 799 ggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggatcc 858
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 622 ggcaagatgggcatatgtgggctcagcatgggtggagtacatgctgcgatggtgggatcc 681

                                                                       
Query: 859 ttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtacct 918
            |||||||||| ||| |||||||||| |||||||| ||| |||| |||||||||||||||
Sbjct: 682 ctgcatcctactccagttgccacactgccatttctcgct-cacactctgctgtggtacct 740

                                                                       
Query: 919 ttctgtgaaggactttacagacatgccacagcttgggaagcactgagagaagatgcagca 978
           ||||||||||   | |||| | | |||||||||||||| ||  ||||| || |||| |||
Sbjct: 741 ttctgtgaagcgttctacaaatacgccacagcttgggacgctttgagaaaacatgctgca 800

                           
Query: 979 gcattagctaaagatg 994
           | |||| || ||||||
Sbjct: 801 gtattaactcaagatg 816



 Score =  202 bits (102), Expect = 3e-48
 Identities = 207/242 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1054 ttacggtcagtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacag 1113
            |||||||||||| | ||| |||| || |||||||| |||||  | || ||||| ||||||
Sbjct: 882  ttacggtcagtgttgtctttgactgatgtcactcgatttccagtcccaaagaacccacag 941

                                                                        
Query: 1114 gccgtcatttttgttggtgcaacggatgacggttatattcctagacactcggtcatggag 1173
            || ||||| ||||||||||||||||| || ||||||||||| ||||| || || ||||||
Sbjct: 942  gcggtcatctttgttggtgcaacggacgatggttatattcccagacattcagtgatggag 1001

                                                                        
Query: 1174 ctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtgtcctct 1233
            ||||||||||||||||| |||||||| ||||||||||| |  || |||||||| ||||||
Sbjct: 1002 ctccagaaggcatggccaggctcagaggtccggtgggtaacaggtggccatgtctcctct 1061

                                                                        
Query: 1234 tttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacagattataa 1293
            || || |||||||||||  | || ||||||||||||||||| |||||||| ||||| |||
Sbjct: 1062 ttcttcctccacaacgatgcattccgcaaggccatcgtcgacgcccttgatagattgtaa 1121

              
Query: 1294 ca 1295
            ||
Sbjct: 1122 ca 1123



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>gb|AY107594.1| Zea mays PCO118980 mRNA sequence
          Length = 1045

 Score =  676 bits (341), Expect = 0.0
 Identities = 632/729 (86%), Gaps = 1/729 (0%)
 Strand = Plus / Plus

                                                                       
Query: 199 atggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactctc 258
           |||||||| || ||| |||||||||| ||||||||| ||||||| |||||||| || || 
Sbjct: 197 atggtatcagttaatcttgggttagttcattatgtactggaccacatatatggaacactt 256

                                                                       
Query: 259 cttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaactt 318
           ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 cttcatcgcaccaaactaggaacaccatttttctcaaaaggatggggaggtaccaaactt 316

                                                                       
Query: 319 gatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggcca 378
           |||||| |||||| ||||||||||||| | || || || || | |||||| | |||||||
Sbjct: 317 gatttgctagagaagatggtgaagcagttgtttcccgaggcacgttgccaaaactggcca 376

                                                                       
Query: 379 ccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgcga 438
           ||||||||||||||||| |  ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 377 ccaactgctgtgcagccaatgtggaaaacagtatgggagacaaacaattcttgtctgcga 436

                                                                       
Query: 439 gagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgagagt 498
           || || |||||| |||| |||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 437 gaaggagttttcaggactacatgtgatgagcgactaatcgatgcattgccacctgagagt 496

                                                                       
Query: 499 cacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggcttgc 558
           |||||||||||||||||||||||||| || ||  ||||  |||| ||||||||| | || 
Sbjct: 497 cacaatgcaagagttgcttttcttacccctaaaaatgttacacctgagaagatgtcatgt 556

                                                                       
Query: 559 gtggtccatttggcaggcaccggtgatcactcatttgagagaaggctacggcttggcgga 618
           ||||||||| | |||||||| ||||||||| |||||||| | ||||| ||||| || || 
Sbjct: 557 gtggtccatcttgcaggcactggtgatcacacatttgagcgcaggcttcggctgggtggg 616

                                                                       
Query: 619 cctcttttgaaggacaatattgcaaccatggttcttgagagcccctattatggacaacga 678
           |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 617 cctcttcttaagaacaatattgcaactatggttcttgagagcccctattatggacagcga 676

                                                                       
Query: 679 cgtcctagcatgcagcatggggccaagcttcaatgtgtgagtgacttgctactcttagga 738
           |||||||||||||||| ||| || ||||| || ||||| |||||  || ||||  |||| 
Sbjct: 677 cgtcctagcatgcagcgtggtgcaaagctccagtgtgttagtgatctgttacttctaggg 736

                                                                       
Query: 739 aaagccactattgatgaagctcgcagtctcttatactggttgcaggctgaggctggttat 798
           |||||||| ||||||||||||||||||||| | |||||| |||||  |||||||||||| 
Sbjct: 737 aaagccacaattgatgaagctcgcagtctcctgtactggctgcagaatgaggctggttac 796

                                                                       
Query: 799 ggcaagatgggcatatgtgggctcagcatgggtggcgtacatgctgcaatggtaggatcc 858
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||  |
Sbjct: 797 ggcaagatgggcatatgtgggctcagcatgggtggagtacatgctgcgatggtgggannc 856

                                                                       
Query: 859 ttgcatcctacgccaattgccacactaccatttcttgctccacattctgctgtggtacct 918
            |||||||||| ||| ||||||||||  || |||| | |||| | ||||||| || ||||
Sbjct: 857 ctgcatcctactccagttgccacactggca-ttctcgntccaaactctgctgngggacct 915

                    
Query: 919 ttctgtgaa 927
           |||||||||
Sbjct: 916 ttctgtgaa 924



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  355 bits (179), Expect = 3e-94
 Identities = 329/379 (86%)
 Strand = Plus / Minus

                                                                           
Query: 197     atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256
               |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| ||  
Sbjct: 5327152 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 5327093

                                                                           
Query: 257     tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316
               ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 5327092 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 5327033

                                                                           
Query: 317     ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376
               ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct: 5327032 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 5326973

                                                                           
Query: 377     caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436
               |||||||||| ||||| || |  |||||||| ||||||||||||||||  ||||||||||
Sbjct: 5326972 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 5326913

                                                                           
Query: 437     gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496
               |||||||||||||| |||| ||||| |||    | |||||||| ||||||||||||||||
Sbjct: 5326912 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 5326853

                                                                           
Query: 497     gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556
               |||||||||||||||||||||||||||| || |||   || ||||| ||||||||||| |
Sbjct: 5326852 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 5326793

                                  
Query: 557     gcgtggtccatttggcagg 575
               | ||| | ||| |||||||
Sbjct: 5326792 gtgtgattcatctggcagg 5326774



 Score =  224 bits (113), Expect = 7e-55
 Identities = 265/316 (83%), Gaps = 6/316 (1%)
 Strand = Plus / Minus

                                                                           
Query: 829     ggtggcgtacatgctgcaatggtaggatccttgcatcctacgccaattgccacactacca 888
               ||||| ||||||||||||||||| ||||||||||| || || |||||||| || || |||
Sbjct: 5325643 ggtggtgtacatgctgcaatggttggatccttgcacccaacaccaattgctacgctgcca 5325584

                                                                           
Query: 889     tttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgccaca 948
               ||||||||||| |||||||||||||| ||||||||||| || || ||||| |||||||||
Sbjct: 5325583 tttcttgctccgcattctgctgtggtgcctttctgtgacgggctctacaggcatgccaca 5325524

                                                                           
Query: 949     gcttgggaagcactgagagaagatgcagcagcattagctaaagatgcaacttctttgtcc 1008
               |||||||| ||| ||||  ||||||||||| |||| ||  |||| | |||||||||| | 
Sbjct: 5325523 gcttgggatgcattgaggaaagatgcagcaacattggcccaagacgtaacttctttgaca 5325464

                                                                           
Query: 1009    gaagatgcggc------atccggaatcactattgagcaagtaaaagacagattacggtca 1062
               |||||   |||      ||| |||||||||||||||||||||| ||| || || || |||
Sbjct: 5325463 gaagacatggcccagaaatcaggaatcactattgagcaagtaagagagaggttgcgatca 5325404

                                                                           
Query: 1063    gtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacaggccgtcatt 1122
               ||||| ||| |||| ||||||||||| |||||  | || ||||| |||||||| ||||||
Sbjct: 5325403 gtgctgtctttgactgacgtcactcgatttccagtgccaaagaacccacaggctgtcatt 5325344

                               
Query: 1123    tttgttggtgcaacgg 1138
               ||||||||||||||||
Sbjct: 5325343 tttgttggtgcaacgg 5325328



 Score =  218 bits (110), Expect = 4e-53
 Identities = 158/174 (90%)
 Strand = Plus / Minus

                                                                           
Query: 658     agcccctattatggacaacgacgtcctagcatgcagcatggggccaagcttcaatgtgtg 717
               ||||| |||||||||||||| || || ||||||||||||||| | |||||||| ||||||
Sbjct: 5326247 agcccttattatggacaacggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtg 5326188

                                                                           
Query: 718     agtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctcttatactgg 777
               |||||||||||||| ||||||||||| |||||||||||||||||||| ||  | ||||||
Sbjct: 5326187 agtgacttgctactattaggaaaagctactattgatgaagctcgcagccttctgtactgg 5326128

                                                                     
Query: 778     ttgcaggctgaggctggttatggcaagatgggcatatgtgggctcagcatgggt 831
               ||||||  |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5326127 ttgcagaatgaggctggttatggcaagatgggcatatgcgggctcagcatgggt 5326074



 Score =  111 bits (56), Expect = 7e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                           
Query: 572     caggcaccggtgatcactcatttgagagaaggctacggcttggcggacctcttttgaagg 631
               ||||||| ||||||||||| ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 5326434 caggcactggtgatcactcgtttgagagaagacttcgacttggtggacctcttttgaagg 5326375

                                           
Query: 632     acaatattgcaaccatggttcttgagag 659
               |||| |||||||| ||||||||||||||
Sbjct: 5326374 acaacattgcaactatggttcttgagag 5326347



 Score =  105 bits (53), Expect = 5e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1168    atggagctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtg 1227
               ||||||||||| ||||||||||| || ||||| ||||||||||| |  ||||| || || 
Sbjct: 5324932 atggagctccaaaaggcatggccaggttcagaggtccggtgggtaaccggagggcacgta 5324873

                                                                           
Query: 1228    tcctcttttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacaga 1287
               || || ||||| |||||||||||| |||||||||||||||| || ||||| ||||| |||
Sbjct: 5324872 tcgtcgtttttcctccacaacgacgcgtttcgcaaggccattgttgatgctcttgataga 5324813

                        
Query: 1288    ttataacag 1296
                ||||||||
Sbjct: 5324812 ctataacag 5324804



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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1225_F07
          Length = 142772

 Score =  355 bits (179), Expect = 3e-94
 Identities = 329/379 (86%)
 Strand = Plus / Minus

                                                                         
Query: 197   atatggtatccgtgaatgttgggttagtacattatgtattggaccatatatatgggactc 256
             |||||||||| |||||| ||||| |||||||||||||| ||||||| |||||||| ||  
Sbjct: 53455 atatggtatcggtgaatcttgggctagtacattatgtactggaccacatatatggtaccg 53396

                                                                         
Query: 257   tccttcatcgcacgaaattaggaacaccatttttctcaaagggatggggaggtaccaaac 316
             ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 53395 tccttcatcgcaccaaattaggaacgccatttttctcgaaaggatggggaggcaccaaac 53336

                                                                         
Query: 317   ttgatttgttagagaggatggtgaagcagcttttcccggaagcgccttgccagagctggc 376
             ||||||||||||||| ||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct: 53335 ttgatttgttagagaagatggtgaaacagttattccctgaagcacgttgccagaactggc 53276

                                                                         
Query: 377   caccaactgctgtgcagcctaaatggaaaacagtttgggagacaaagaactcttgtctgc 436
             |||||||||| ||||| || |  |||||||| ||||||||||||||||  ||||||||||
Sbjct: 53275 caccaactgccgtgcaacccatgtggaaaacggtttgggagacaaagagttcttgtctgc 53216

                                                                         
Query: 437   gagagggtgttttccggacaacatgtgatgagagactaattgatgcattgcctcctgaga 496
             |||||||||||||| |||| ||||| |||    | |||||||| ||||||||||||||||
Sbjct: 53215 gagagggtgttttcaggactacatgcgatccacggctaattgaagcattgcctcctgaga 53156

                                                                         
Query: 497   gtcacaatgcaagagttgcttttcttacgcccaaggatgtctcaccagagaagatggctt 556
             |||||||||||||||||||||||||||| || |||   || ||||| ||||||||||| |
Sbjct: 53155 gtcacaatgcaagagttgcttttcttacacctaagtcagtttcacctgagaagatggcct 53096

                                
Query: 557   gcgtggtccatttggcagg 575
             | ||| | ||| |||||||
Sbjct: 53095 gtgtgattcatctggcagg 53077



 Score =  224 bits (113), Expect = 7e-55
 Identities = 265/316 (83%), Gaps = 6/316 (1%)
 Strand = Plus / Minus

                                                                         
Query: 829   ggtggcgtacatgctgcaatggtaggatccttgcatcctacgccaattgccacactacca 888
             ||||| ||||||||||||||||| ||||||||||| || || |||||||| || || |||
Sbjct: 51946 ggtggtgtacatgctgcaatggttggatccttgcacccaacaccaattgctacgctgcca 51887

                                                                         
Query: 889   tttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgccaca 948
             ||||||||||| |||||||||||||| ||||||||||| || || ||||| |||||||||
Sbjct: 51886 tttcttgctccgcattctgctgtggtgcctttctgtgacgggctctacaggcatgccaca 51827

                                                                         
Query: 949   gcttgggaagcactgagagaagatgcagcagcattagctaaagatgcaacttctttgtcc 1008
             |||||||| ||| ||||  ||||||||||| |||| ||  |||| | |||||||||| | 
Sbjct: 51826 gcttgggatgcattgaggaaagatgcagcaacattggcccaagacgtaacttctttgaca 51767

                                                                         
Query: 1009  gaagatgcggc------atccggaatcactattgagcaagtaaaagacagattacggtca 1062
             |||||   |||      ||| |||||||||||||||||||||| ||| || || || |||
Sbjct: 51766 gaagacatggcccagaaatcaggaatcactattgagcaagtaagagagaggttgcgatca 51707

                                                                         
Query: 1063  gtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacaggccgtcatt 1122
             ||||| ||| |||| ||||||||||| |||||  | || ||||| |||||||| ||||||
Sbjct: 51706 gtgctgtctttgactgacgtcactcgatttccagtgccaaagaacccacaggctgtcatt 51647

                             
Query: 1123  tttgttggtgcaacgg 1138
             ||||||||||||||||
Sbjct: 51646 tttgttggtgcaacgg 51631



 Score =  218 bits (110), Expect = 4e-53
 Identities = 158/174 (90%)
 Strand = Plus / Minus

                                                                         
Query: 658   agcccctattatggacaacgacgtcctagcatgcagcatggggccaagcttcaatgtgtg 717
             ||||| |||||||||||||| || || ||||||||||||||| | |||||||| ||||||
Sbjct: 52550 agcccttattatggacaacggcgaccaagcatgcagcatgggtcaaagcttcagtgtgtg 52491

                                                                         
Query: 718   agtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctcttatactgg 777
             |||||||||||||| ||||||||||| |||||||||||||||||||| ||  | ||||||
Sbjct: 52490 agtgacttgctactattaggaaaagctactattgatgaagctcgcagccttctgtactgg 52431

                                                                   
Query: 778   ttgcaggctgaggctggttatggcaagatgggcatatgtgggctcagcatgggt 831
             ||||||  |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 52430 ttgcagaatgaggctggttatggcaagatgggcatatgcgggctcagcatgggt 52377



 Score =  111 bits (56), Expect = 7e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 572   caggcaccggtgatcactcatttgagagaaggctacggcttggcggacctcttttgaagg 631
             ||||||| ||||||||||| ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 52737 caggcactggtgatcactcgtttgagagaagacttcgacttggtggacctcttttgaagg 52678

                                         
Query: 632   acaatattgcaaccatggttcttgagag 659
             |||| |||||||| ||||||||||||||
Sbjct: 52677 acaacattgcaactatggttcttgagag 52650



 Score =  105 bits (53), Expect = 5e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1168  atggagctccagaaggcatggccgggctcagaagtccggtgggtgatgggaggccatgtg 1227
             ||||||||||| ||||||||||| || ||||| ||||||||||| |  ||||| || || 
Sbjct: 51235 atggagctccaaaaggcatggccaggttcagaggtccggtgggtaaccggagggcacgta 51176

                                                                         
Query: 1228  tcctcttttttactccacaacgactcgtttcgcaaggccatcgtcgatgcccttgacaga 1287
             || || ||||| |||||||||||| |||||||||||||||| || ||||| ||||| |||
Sbjct: 51175 tcgtcgtttttcctccacaacgacgcgtttcgcaaggccattgttgatgctcttgataga 51116

                      
Query: 1288  ttataacag 1296
              ||||||||
Sbjct: 51115 ctataacag 51107



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>gb|AY112416.1| Zea mays CL8338_1 mRNA sequence
          Length = 827

 Score =  147 bits (74), Expect = 1e-31
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1054 ttacggtcagtgctatctctgacggacgtcactcggtttcccctaccgaagaatccacag 1113
            |||||||||||| | ||| |||| || |||||||| |||||  | || ||||| ||||||
Sbjct: 646  ttacggtcagtgttgtctttgactgatgtcactcgatttccagtcccaaagaacccacag 587

                                                                        
Query: 1114 gccgtcatttttgttggtgcaacggatgacggttatattcctagacactcggtcatggag 1173
            || ||||| ||||||||||||||||| || ||||||||||| ||||| || || ||||||
Sbjct: 586  gcggtcatctttgttggtgcaacggacgatggttatattcccagacattcagtgatggag 527

                                                  
Query: 1174 ctccagaaggcatggccgggctcagaagtccggtgggt 1211
            ||||||||||||||||| |||||||| |||||||||||
Sbjct: 526  ctccagaaggcatggccaggctcagaggtccggtgggt 489



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 886 ccatttcttgctccacattctgctgtggtacctttctgtgaaggactttacagacatgcc 945
           |||||||| |||||||| ||||||||||||||||||||||||||  | |||| | | |||
Sbjct: 820 ccatttctcgctccacactctgctgtggtacctttctgtgaaggggtctacaaatacgcc 761

                                                            
Query: 946 acagcttgggaagcactgagagaagatgcagcagcattagctaaagatg 994
           ||||||||||| ||  ||||| ||||||| |||| |||| || ||||||
Sbjct: 760 acagcttgggacgctttgagaaaagatgctgcagtattaactcaagatg 712



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 1258 cgcaaggccatcgtcgatgcccttgacagattataaca 1295
            ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 442  cgcaaggccatcgtcgacgcccttgatagattgtaaca 405



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>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence
          Length = 120527

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 480  tgcattgcctcctgagagtcacaatgcaagagttgcttttctta 523
            ||||||||| ||||||||||||| ||| || |||||||||||||
Sbjct: 2523 tgcattgccacctgagagtcacattgctagggttgcttttctta 2480



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 712  tgtgtgagtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctctta 771
            ||||| ||||||||||| || ||||||| ||| || ||||| || || |||||||| |||
Sbjct: 1054 tgtgtcagtgacttgcttctattaggaagagcaaccattgaagaggcacgcagtctgtta 995

                                                  
Query: 772  tactggttgcaggctgaggctggttatggcaagatggg 809
             |||||||| |   |||||| ||||  |||||||||||
Sbjct: 994  cactggttggactttgaggcaggtttcggcaagatggg 957



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 626  tgaaggacaatattgcaaccatggttcttgagag 659
            ||||||| || |||||||||||||||||||||||
Sbjct: 1250 tgaaggaaaacattgcaaccatggttcttgagag 1217



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 280  acaccatttttctcaaagggatggggaggtaccaaact 317
            ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 2723 acaccatttttctcaagaggatggggtggtacaaaact 2686



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>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence
          Length = 154095

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 480    tgcattgcctcctgagagtcacaatgcaagagttgcttttctta 523
              ||||||||| ||||||||||||| ||| || |||||||||||||
Sbjct: 143976 tgcattgccacctgagagtcacattgctagggttgcttttctta 143933



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                          
Query: 712    tgtgtgagtgacttgctactcttaggaaaagccactattgatgaagctcgcagtctctta 771
              ||||| ||||||||||| || ||||||| ||| || ||||| || || |||||||| |||
Sbjct: 142507 tgtgtcagtgacttgcttctattaggaagagcaaccattgaagaggcacgcagtctgtta 142448

                                                    
Query: 772    tactggttgcaggctgaggctggttatggcaagatggg 809
               |||||||| |   |||||| ||||  |||||||||||
Sbjct: 142447 cactggttggactttgaggcaggtttcggcaagatggg 142410



 Score = 52.0 bits (26), Expect = 0.006
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 626    tgaaggacaatattgcaaccatggttcttgagag 659
              ||||||| || |||||||||||||||||||||||
Sbjct: 142703 tgaaggaaaacattgcaaccatggttcttgagag 142670



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 280    acaccatttttctcaaagggatggggaggtaccaaact 317
              ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 144176 acaccatttttctcaagaggatggggtggtacaaaact 144139



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>ref|NM_001057864.1| Oryza sativa (japonica cultivar-group) Os03g0758000 (Os03g0758000)
           mRNA, complete cds
          Length = 1276

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  atccccgcgccgccttcctcgc 106
           ||||||||||||||||||||||
Sbjct: 214 atccccgcgccgccttcctcgc 193



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>tpg|BK005006.1| TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription
           factor 3 (WRKY3) gene, complete cds
          Length = 3406

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  atccccgcgccgccttcctcgc 106
           ||||||||||||||||||||||
Sbjct: 119 atccccgcgccgccttcctcgc 98



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>gb|AY359555.1| Callinectes sapidus clone CSA-016 microsatellite sequence
          Length = 254

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1289 tataacagggtgattcttgtgt 1310
            ||||||||||||||||||||||
Sbjct: 54   tataacagggtgattcttgtgt 75



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>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0117L20 map S2137, complete sequence
          Length = 125303

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 90    cgcgccgccttcctcgcgccgccgcg 115
             |||||||||||| |||||||||||||
Sbjct: 16222 cgcgccgccttcgtcgcgccgccgcg 16247



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>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map
              near S2137, complete sequence
          Length = 197516

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 90     cgcgccgccttcctcgcgccgccgcg 115
              |||||||||||| |||||||||||||
Sbjct: 194419 cgcgccgccttcgtcgcgccgccgcg 194444



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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
             genomic sequence, complete sequence
          Length = 168759

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    atccccgcgccgccttcctcgc 106
             ||||||||||||||||||||||
Sbjct: 73273 atccccgcgccgccttcctcgc 73252



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>gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds
          Length = 1276

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  atccccgcgccgccttcctcgc 106
           ||||||||||||||||||||||
Sbjct: 214 atccccgcgccgccttcctcgc 193



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>ref|NM_059805.3| Caenorhabditis elegans C54G4.7 (C54G4.7) mRNA, complete cds
          Length = 1744

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 565 catttggcaggcaccggtgatcactc 590
           ||||||||||||||||| ||||||||
Sbjct: 724 catttggcaggcaccggagatcactc 749



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>emb|Z75533.1|CEC54G4 Caenorhabditis elegans Cosmid C54G4, complete sequence
          Length = 34743

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 565   catttggcaggcaccggtgatcactc 590
             ||||||||||||||||| ||||||||
Sbjct: 28857 catttggcaggcaccggagatcactc 28882



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 90      cgcgccgccttcctcgcgccgccgcg 115
               |||||||||||| |||||||||||||
Sbjct: 8113920 cgcgccgccttcgtcgcgccgccgcg 8113945



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 85       atccccgcgccgccttcctcgc 106
                ||||||||||||||||||||||
Sbjct: 31113314 atccccgcgccgccttcctcgc 31113335



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>emb|BX957220.1| Methanococcus maripaludis S2 complete genome; segment 2/5
          Length = 349648

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 473    taattgatgcattgcctcctga 494
              ||||||||||||||||||||||
Sbjct: 285258 taattgatgcattgcctcctga 285279



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>ref|NM_112050.2| Arabidopsis thaliana unknown protein (AT3G12150) mRNA, complete cds
          Length = 1652

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587
           ||||||||||| ||||| ||| | |||||||| ||||||||
Sbjct: 640 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 680



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>gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome 9, complete sequence
          Length = 171723

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1107  tccacaggccgtcatttttgt 1127
             |||||||||||||||||||||
Sbjct: 25139 tccacaggccgtcatttttgt 25159



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>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1428  ttggattaaacaagtggtaga 1448
             |||||||||||||||||||||
Sbjct: 88394 ttggattaaacaagtggtaga 88374



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>gb|BT008851.1| Arabidopsis thaliana At3g12156 mRNA, complete cds
          Length = 1092

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587
           ||||||||||| ||||| ||| | |||||||| ||||||||
Sbjct: 361 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 401



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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1029    cactattgagcaagtaaaaga 1049
               |||||||||||||||||||||
Sbjct: 1153187 cactattgagcaagtaaaaga 1153207



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>dbj|AK019319.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:2900019G12 product:apolipoprotein E, full
            insert sequence
          Length = 844

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1107 tccacaggccgtcatttttgt 1127
            |||||||||||||||||||||
Sbjct: 27   tccacaggccgtcatttttgt 7



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>gb|AY093234.1| Arabidopsis thaliana unknown protein (At3g12150) mRNA, complete cds
          Length = 1643

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 547 aagatggcttgcgtggtccatttggcaggcaccggtgatca 587
           ||||||||||| ||||| ||| | |||||||| ||||||||
Sbjct: 650 aagatggcttgtgtggttcatcttgcaggcacaggtgatca 690



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>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence
          Length = 217921

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 271    aaattaggaacaccatttttc 291
              |||||||||||||||||||||
Sbjct: 126239 aaattaggaacaccatttttc 126259



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>gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complete sequence
          Length = 167132

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 455   caacatgtgatgagagactaa 475
             |||||||||||||||||||||
Sbjct: 60264 caacatgtgatgagagactaa 60284



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>gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, complete sequence
          Length = 242531

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1107   tccacaggccgtcatttttgt 1127
              |||||||||||||||||||||
Sbjct: 103950 tccacaggccgtcatttttgt 103930



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>gb|AC154611.2| Mus musculus BAC clone RP23-335I9 from 13, complete sequence
          Length = 182452

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 402    gaaaacagtttgggagacaaa 422
              |||||||||||||||||||||
Sbjct: 179372 gaaaacagtttgggagacaaa 179392



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>ref|NM_200666.1| Danio rerio ilvB (bacterial acetolactate synthase)-like (ilvbl), mRNA
 gb|BC057527.1| Danio rerio ilvB (bacterial acetolactate synthase)-like, mRNA (cDNA
            clone MGC:66376 IMAGE:5612706), complete cds
          Length = 2981

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 500  acaatgcaagagttgcttttcttac 524
            |||||||||||| ||||||||||||
Sbjct: 2543 acaatgcaagaggtgcttttcttac 2567



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>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence
          Length = 176876

 Score = 42.1 bits (21), Expect = 5.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 402   gaaaacagtttgggagacaaa 422
             |||||||||||||||||||||
Sbjct: 46788 gaaaacagtttgggagacaaa 46808


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 255,963,153
Number of extensions: 12613191
Number of successful extensions: 224885
Number of sequences better than 10.0: 35
Number of HSP's gapped: 224877
Number of HSP's successfully gapped: 57
Length of query: 1507
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1484
Effective length of database: 18,503,978,556
Effective search space: 27459904177104
Effective search space used: 27459904177104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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