ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf25j20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK103033:Os10g0546300 36 0.100
2AK106775:Os05g0376800 33 0.65
3AK111085:Os06g0323000 33 0.84
4AK100868:Os01g0548000 33 0.85
5AK067227:Os01g0120700 31 2.5
6AK071766:Os02g0678400 31 3.2
7Os08g0542000:Os08g0542000 31 3.2
8AK119848: 31 3.2
9AK069926:Os04g0449900 28 4.2
10Os12g0546000:Os12g0546000 30 4.2
11AK107676:Os09g0409000 30 4.2
12AK101973:Os04g0431100 30 4.2
13AK062516:Os06g0266800 30 5.5
14AK121181:Os03g0261800 29 9.3
15AK109628:Os04g0389800 29 9.3
16AK060717:Os03g0261800 29 9.3

>AK103033:Os10g0546300 |
          Length = 1074
 Score = 35.8 bits (81), Expect = 0.100
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 294 ISENPRSKQKKNP-TSENLWNKPSYQLRGTTTPCMNHVFELGRPRTWQLGSLQYLTYLGR 118
           +S+   S    NP TS +  + P YQLR      + H FE GR   WQL + +    L  
Sbjct: 459 MSDRTSSSDVSNPDTSTSGTDSPFYQLRTDAAKLVAHAFERGRRNLWQLATSRLSVLLSS 518

Query: 117 DLV 109
            +V
Sbjct: 519 SVV 521



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>AK106775:Os05g0376800 |
          Length = 152

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 1231 PGPASSAGCSKEAAERAAPSPYEQPSYSELV*CVCFGLSLCAVCCCVAPGT 1079
            PG      C    A R + + Y +P       C+ F    CA C CV PGT
Sbjct: 86   PGSLRPQECGGRCAYRCSATAYRKP-------CMFFCQKCCASCLCVLPGT 129



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>AK111085:Os06g0323000 |
          Length = 117

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = -3

Query: 1318 GTAWTS*CPPEELEPPGSAHRMARCHHRWPGPASSAGCSKEAAERAAPSPYEQP 1157
            G +W    PP    PP   HR  R    W    S A C    A R  P+P  QP
Sbjct: 30   GLSWGRSRPP----PPSPPHRRQRQRGSWRRARSQAACLLPPARRVLPAPGIQP 79



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>AK100868:Os01g0548000 |
          Length = 248

 Score = 32.7 bits (73), Expect = 0.85
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = -1

Query: 1593 HTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKPLMASLLAEATL 1414
            H  D  +     +  KEGT T         KPL+  LL     H  SK ++   +A+AT 
Sbjct: 154  HIIDAYVTCLREKDMKEGTRTRAEGTVFPEKPLITRLLQRDGEHYVSKDIIDRAMAKATA 213

Query: 1413 GHHLPED 1393
              +L  D
Sbjct: 214  NRYLKHD 220



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>AK067227:Os01g0120700 |
          Length = 285

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 20/88 (22%)
 Frame = -3

Query: 1726 TRNHNHRWYLLSGDN*NTQQERIGSSKPHRHTQESEIEGRIRN*SHTRHKP--------- 1574
            +R+H H  +  SGD+  ++ E  G S+  +H + S+ +    + +H   +          
Sbjct: 168  SRSHRHHHHRSSGDDSGSESEERGRSRHKKHHRSSDEDATSDSNNHKHRRSRSLEESSDD 227

Query: 1573 -----------GPTTHKETKRRHHNNMH 1523
                       G   HK    RHH+  H
Sbjct: 228  AAAGEYEKVRNGKRPHKTGHHRHHHRHH 255



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>AK071766:Os02g0678400 |
          Length = 203

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
 Frame = -3

Query: 1312 AWTS*CPPEELEPPGSAHRMARCHHRWP-----GPASSAGCSKEAAER-AAPSP 1169
            AW S  PP    PP  + R  R   R       GP  S  CS  +A R A+PSP
Sbjct: 38   AWAS--PPTAPPPPPRSRRRPRSRRRTSSSSTAGPGGSGACSASSAPRGASPSP 89



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>Os08g0542000:Os08g0542000 |
          Length = 529

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -1

Query: 408 LADSKHCPYWPTENPTDTGCLVWDSNHPSTD----HIFTSRRISENPRSKQKKNPTSE 247
           +ADSK  PY P EN  D      + ++PS D     +  +++  +  ++K+KK P  +
Sbjct: 83  VADSKGAPYSPPENDDDA-----EVDYPSQDGAQGTVIAAKKKKKKSKAKKKKGPLQQ 135



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>AK119848: |
          Length = 555

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -1

Query: 1596 SHTHDTSLDRPHTRK-RKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKP 1447
            S +   SLDR  +++ RK+G + + +P+ S +K   A+    +P+ S S+P
Sbjct: 89   SPSRSRSLDREDSKRGRKKGRSPSASPSRSPAKRRRAASASRSPSRSPSRP 139



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>AK069926:Os04g0449900 |
          Length = 426

 Score = 28.1 bits (61), Expect(2) = 4.2
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = -2

Query: 1577 AWTDHTQGNEKKAPQQHAHPHTVLASHSWLHCFLKHPHTVLASHSWLHCLPKQP 1416
            A T  T  ++   P  H HPH     H   H    HPH  +A   W+  LP  P
Sbjct: 5    ATTTTTDSSQAAVPPHHPHPHA--HPHPDAH---PHPHHPMAQARWV-VLPYPP 52



 Score = 20.8 bits (42), Expect(2) = 4.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 1294 PPEELEPPGSAHRMARCHHRWPGPASSAGCSKEAAERAAPSP 1169
            PP    PP    + A+     P PA++AG       R  P+P
Sbjct: 55   PPMVAAPPPPPPQYAKHFAAGPPPAAAAG-------RRTPTP 89



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>Os12g0546000:Os12g0546000 |
          Length = 274

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
 Frame = -1

Query: 1653 PRNHTGTHKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPE 1474
            P + + T  R+ +         H     R H R R    ++   P H+A++  + S  PE
Sbjct: 7    PNDPSATSSRLPVERSLSKGPGHPAQSVRIH-RSRTPIASSFNQPEHAAARLPVESSSPE 65

Query: 1473 APAH--SASKPLMASLLAEA-----TLGHHLPEDAGSKQ 1378
            +P+H    S P + S +A A     T   HLP ++  ++
Sbjct: 66   SPSHPPEVSDPPIGSPIASAAINPSTTSSHLPVESSHRR 104



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>AK107676:Os09g0409000 |
          Length = 126

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
 Frame = +1

Query: 1237 DDDILPSDELSLEVLAL----LEDIMK-----SKLCPAACVSCLVQVGKTCP---LTMTL 1380
            DDD  P+    LE        L D++      + +CP+ C  CLV+   TC    ++   
Sbjct: 49   DDDATPTTLQQLETRLADDQDLADLLDGGDGAATICPSNCQKCLVKCAGTCVADIVSPPT 108

Query: 1381 FAPCVLGKVMSQGCFGK 1431
            F  C L   + + CF K
Sbjct: 109  FVACFLKCAVVKLCFAK 125



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>AK101973:Os04g0431100 |
          Length = 290

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -1

Query: 1581 TSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKPLMAS 1435
            T L RP T      T    +P+ S+ +P   SLL     H+A  PL A+
Sbjct: 16   TYLHRPRTLAPPASTPARLSPSSSSRRPATPSLLSLRRTHAAPPPLRAA 64



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>AK062516:Os06g0266800 |
          Length = 84

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 1207 CSKEAAERAAPSPYEQPSYSELV*CVCFGLSLCAVCCCVAPGT 1079
            CS + A R + + Y++        C+ F    CA C CV PGT
Sbjct: 26   CSPKCAGRCSNTQYKKA-------CLTFCNKCCAKCLCVPPGT 61



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>AK121181:Os03g0261800 |
          Length = 394

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -1

Query: 1656 GPRNHTGT---HKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMAS 1486
            GPR H  +   +K V        S   DT+   P+  +R  G+TTT   A  A+  L A+
Sbjct: 281  GPRVHRSSLVINKFVNAEPAIAASDISDTAATAPNPPRRPTGSTTTAAAALVAASSLSAT 340

Query: 1485 LLP 1477
              P
Sbjct: 341  SAP 343



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>AK109628:Os04g0389800 |
          Length = 639

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 28/107 (26%), Positives = 37/107 (34%)
 Frame = -1

Query: 1668 RRGSGPRNHTGTHKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMA 1489
            RRG  P  H G H+R R     +    H  +   P      EG          A +P   
Sbjct: 496  RRGGQPGRHRGRHRRRR-----QPPDEHPGARHGPRRGPAGEG--------DGAEQP--- 539

Query: 1488 SLLPEAPAHSASKPLMASLLAEATLGHHLPEDAGSKQRHRQRAGLPD 1348
                 AP H  +   +   +     G HLP   G ++R R   GL D
Sbjct: 540  -----APGHGGA---VGGQVLRRQQGAHLPRQPGGERRRRGVPGLRD 578



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>AK060717:Os03g0261800 |
          Length = 326

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -1

Query: 1656 GPRNHTGT---HKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMAS 1486
            GPR H  +   +K V        S   DT+   P+  +R  G+TTT   A  A+  L A+
Sbjct: 213  GPRVHRSSLVINKFVNAEPAIAASDISDTAATAPNPPRRPTGSTTTAAAALVAASSLSAT 272

Query: 1485 LLP 1477
              P
Sbjct: 273  SAP 275


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 49,128,036
Number of extensions: 1113477
Number of successful extensions: 3086
Number of sequences better than 10.0: 16
Number of HSP's gapped: 3081
Number of HSP's successfully gapped: 17
Length of query: 591
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 485
Effective length of database: 11,155,509
Effective search space: 5410421865
Effective search space used: 5410421865
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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