| Clone Name | FLbaf25j20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103033:Os10g0546300 | 36 | 0.100 | 2 | AK106775:Os05g0376800 | 33 | 0.65 | 3 | AK111085:Os06g0323000 | 33 | 0.84 | 4 | AK100868:Os01g0548000 | 33 | 0.85 | 5 | AK067227:Os01g0120700 | 31 | 2.5 | 6 | AK071766:Os02g0678400 | 31 | 3.2 | 7 | Os08g0542000:Os08g0542000 | 31 | 3.2 | 8 | AK119848: | 31 | 3.2 | 9 | AK069926:Os04g0449900 | 28 | 4.2 | 10 | Os12g0546000:Os12g0546000 | 30 | 4.2 | 11 | AK107676:Os09g0409000 | 30 | 4.2 | 12 | AK101973:Os04g0431100 | 30 | 4.2 | 13 | AK062516:Os06g0266800 | 30 | 5.5 | 14 | AK121181:Os03g0261800 | 29 | 9.3 | 15 | AK109628:Os04g0389800 | 29 | 9.3 | 16 | AK060717:Os03g0261800 | 29 | 9.3 |
|---|
>AK103033:Os10g0546300 | Length = 1074 Score = 35.8 bits (81), Expect = 0.100 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 294 ISENPRSKQKKNP-TSENLWNKPSYQLRGTTTPCMNHVFELGRPRTWQLGSLQYLTYLGR 118 +S+ S NP TS + + P YQLR + H FE GR WQL + + L Sbjct: 459 MSDRTSSSDVSNPDTSTSGTDSPFYQLRTDAAKLVAHAFERGRRNLWQLATSRLSVLLSS 518 Query: 117 DLV 109 +V Sbjct: 519 SVV 521
>AK106775:Os05g0376800 | Length = 152 Score = 33.1 bits (74), Expect = 0.65 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -3 Query: 1231 PGPASSAGCSKEAAERAAPSPYEQPSYSELV*CVCFGLSLCAVCCCVAPGT 1079 PG C A R + + Y +P C+ F CA C CV PGT Sbjct: 86 PGSLRPQECGGRCAYRCSATAYRKP-------CMFFCQKCCASCLCVLPGT 129
>AK111085:Os06g0323000 | Length = 117 Score = 32.7 bits (73), Expect = 0.84 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -3 Query: 1318 GTAWTS*CPPEELEPPGSAHRMARCHHRWPGPASSAGCSKEAAERAAPSPYEQP 1157 G +W PP PP HR R W S A C A R P+P QP Sbjct: 30 GLSWGRSRPP----PPSPPHRRQRQRGSWRRARSQAACLLPPARRVLPAPGIQP 79
>AK100868:Os01g0548000 | Length = 248 Score = 32.7 bits (73), Expect = 0.85 Identities = 20/67 (29%), Positives = 28/67 (41%) Frame = -1 Query: 1593 HTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKPLMASLLAEATL 1414 H D + + KEGT T KPL+ LL H SK ++ +A+AT Sbjct: 154 HIIDAYVTCLREKDMKEGTRTRAEGTVFPEKPLITRLLQRDGEHYVSKDIIDRAMAKATA 213 Query: 1413 GHHLPED 1393 +L D Sbjct: 214 NRYLKHD 220
>AK067227:Os01g0120700 | Length = 285 Score = 31.2 bits (69), Expect = 2.5 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 20/88 (22%) Frame = -3 Query: 1726 TRNHNHRWYLLSGDN*NTQQERIGSSKPHRHTQESEIEGRIRN*SHTRHKP--------- 1574 +R+H H + SGD+ ++ E G S+ +H + S+ + + +H + Sbjct: 168 SRSHRHHHHRSSGDDSGSESEERGRSRHKKHHRSSDEDATSDSNNHKHRRSRSLEESSDD 227 Query: 1573 -----------GPTTHKETKRRHHNNMH 1523 G HK RHH+ H Sbjct: 228 AAAGEYEKVRNGKRPHKTGHHRHHHRHH 255
>AK071766:Os02g0678400 | Length = 203 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Frame = -3 Query: 1312 AWTS*CPPEELEPPGSAHRMARCHHRWP-----GPASSAGCSKEAAER-AAPSP 1169 AW S PP PP + R R R GP S CS +A R A+PSP Sbjct: 38 AWAS--PPTAPPPPPRSRRRPRSRRRTSSSSTAGPGGSGACSASSAPRGASPSP 89
>Os08g0542000:Os08g0542000 | Length = 529 Score = 30.8 bits (68), Expect = 3.2 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = -1 Query: 408 LADSKHCPYWPTENPTDTGCLVWDSNHPSTD----HIFTSRRISENPRSKQKKNPTSE 247 +ADSK PY P EN D + ++PS D + +++ + ++K+KK P + Sbjct: 83 VADSKGAPYSPPENDDDA-----EVDYPSQDGAQGTVIAAKKKKKKSKAKKKKGPLQQ 135
>AK119848: | Length = 555 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -1 Query: 1596 SHTHDTSLDRPHTRK-RKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKP 1447 S + SLDR +++ RK+G + + +P+ S +K A+ +P+ S S+P Sbjct: 89 SPSRSRSLDREDSKRGRKKGRSPSASPSRSPAKRRRAASASRSPSRSPSRP 139
>AK069926:Os04g0449900 | Length = 426 Score = 28.1 bits (61), Expect(2) = 4.2 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -2 Query: 1577 AWTDHTQGNEKKAPQQHAHPHTVLASHSWLHCFLKHPHTVLASHSWLHCLPKQP 1416 A T T ++ P H HPH H H HPH +A W+ LP P Sbjct: 5 ATTTTTDSSQAAVPPHHPHPHA--HPHPDAH---PHPHHPMAQARWV-VLPYPP 52 Score = 20.8 bits (42), Expect(2) = 4.2 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = -3 Query: 1294 PPEELEPPGSAHRMARCHHRWPGPASSAGCSKEAAERAAPSP 1169 PP PP + A+ P PA++AG R P+P Sbjct: 55 PPMVAAPPPPPPQYAKHFAAGPPPAAAAG-------RRTPTP 89
>Os12g0546000:Os12g0546000 | Length = 274 Score = 30.4 bits (67), Expect = 4.2 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Frame = -1 Query: 1653 PRNHTGTHKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPE 1474 P + + T R+ + H R H R R ++ P H+A++ + S PE Sbjct: 7 PNDPSATSSRLPVERSLSKGPGHPAQSVRIH-RSRTPIASSFNQPEHAAARLPVESSSPE 65 Query: 1473 APAH--SASKPLMASLLAEA-----TLGHHLPEDAGSKQ 1378 +P+H S P + S +A A T HLP ++ ++ Sbjct: 66 SPSHPPEVSDPPIGSPIASAAINPSTTSSHLPVESSHRR 104
>AK107676:Os09g0409000 | Length = 126 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 12/77 (15%) Frame = +1 Query: 1237 DDDILPSDELSLEVLAL----LEDIMK-----SKLCPAACVSCLVQVGKTCP---LTMTL 1380 DDD P+ LE L D++ + +CP+ C CLV+ TC ++ Sbjct: 49 DDDATPTTLQQLETRLADDQDLADLLDGGDGAATICPSNCQKCLVKCAGTCVADIVSPPT 108 Query: 1381 FAPCVLGKVMSQGCFGK 1431 F C L + + CF K Sbjct: 109 FVACFLKCAVVKLCFAK 125
>AK101973:Os04g0431100 | Length = 290 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -1 Query: 1581 TSLDRPHTRKRKEGTTTTCTPAHSASKPLMASLLPEAPAHSASKPLMAS 1435 T L RP T T +P+ S+ +P SLL H+A PL A+ Sbjct: 16 TYLHRPRTLAPPASTPARLSPSSSSRRPATPSLLSLRRTHAAPPPLRAA 64
>AK062516:Os06g0266800 | Length = 84 Score = 30.0 bits (66), Expect = 5.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -3 Query: 1207 CSKEAAERAAPSPYEQPSYSELV*CVCFGLSLCAVCCCVAPGT 1079 CS + A R + + Y++ C+ F CA C CV PGT Sbjct: 26 CSPKCAGRCSNTQYKKA-------CLTFCNKCCAKCLCVPPGT 61
>AK121181:Os03g0261800 | Length = 394 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -1 Query: 1656 GPRNHTGT---HKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMAS 1486 GPR H + +K V S DT+ P+ +R G+TTT A A+ L A+ Sbjct: 281 GPRVHRSSLVINKFVNAEPAIAASDISDTAATAPNPPRRPTGSTTTAAAALVAASSLSAT 340 Query: 1485 LLP 1477 P Sbjct: 341 SAP 343
>AK109628:Os04g0389800 | Length = 639 Score = 29.3 bits (64), Expect = 9.3 Identities = 28/107 (26%), Positives = 37/107 (34%) Frame = -1 Query: 1668 RRGSGPRNHTGTHKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMA 1489 RRG P H G H+R R + H + P EG A +P Sbjct: 496 RRGGQPGRHRGRHRRRR-----QPPDEHPGARHGPRRGPAGEG--------DGAEQP--- 539 Query: 1488 SLLPEAPAHSASKPLMASLLAEATLGHHLPEDAGSKQRHRQRAGLPD 1348 AP H + + + G HLP G ++R R GL D Sbjct: 540 -----APGHGGA---VGGQVLRRQQGAHLPRQPGGERRRRGVPGLRD 578
>AK060717:Os03g0261800 | Length = 326 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -1 Query: 1656 GPRNHTGT---HKRVRLREE*ETSHTHDTSLDRPHTRKRKEGTTTTCTPAHSASKPLMAS 1486 GPR H + +K V S DT+ P+ +R G+TTT A A+ L A+ Sbjct: 213 GPRVHRSSLVINKFVNAEPAIAASDISDTAATAPNPPRRPTGSTTTAAAALVAASSLSAT 272 Query: 1485 LLP 1477 P Sbjct: 273 SAP 275 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,128,036 Number of extensions: 1113477 Number of successful extensions: 3086 Number of sequences better than 10.0: 16 Number of HSP's gapped: 3081 Number of HSP's successfully gapped: 17 Length of query: 591 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 485 Effective length of database: 11,155,509 Effective search space: 5410421865 Effective search space used: 5410421865 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)