ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf4j20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ886917.1| Triticum monococcum subsp. aegilopoides VIL2 protein (VIL2) mRNA, complete cds Length = 2386 Score = 3610 bits (1821), Expect = 0.0 Identities = 2178/2297 (94%) Strand = Plus / Plus Query: 127 atcccgctctccctccctctctccggccatggatcctccctacgcaggagctattattga 186 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 atccccctctccctccctctctccggccatggatcctccctacgcaggagctattattga 146 Query: 187 acctgctaaatgccgattgatgagtgtggaggaaaagcgggatcttgttcgtgaattatc 246 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 147 acctgctaaatgccgattgatgagtgtggatgaaaagaaggatcttgttcgtgaattatc 206 Query: 247 aaagaggccacaaagtgctcctgacaaactacagtcatggagtcggcgtgatattgtgga 306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 207 gaagaggccacaaactgctcctgacaaactacagtcatggagtcggcgtgatattgtaga 266 Query: 307 tatcctttgtgctgatctcggaagggaaaggaaatatactggactatctaagcagagaat 366 || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 267 gattctttgtgctgatcttggaagggaaaggaaatatactggattatctaagcagagaat 326 Query: 367 gctggattatctcttcagggtggtgactggcaaatcatctggccctgtggtgcatgtgca 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 gctggattatctcttcagggtggtgactggcaaatcatctggccctgtggtgcatgtgca 386 Query: 427 agagaaggagccaactcttgatcccaacgcaagtaaccatcagtaccccgcgaaacgtca 486 ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 387 agaaaaggagccaactctcgatcccaacacaagtaaccatcagtaccccgcgaaacgtca 446 Query: 487 aaggaagagtgacaatccatcacgattgccaattgttgtcaacaatccgctaaccgctgt 546 ||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||| || Sbjct: 447 aaggaagagtgacaatccatcacgactgccgattgctgtcaacaatccgcaaaccgcagt 506 Query: 547 tgtacccgtgccaattaataatgtgcggtcctgccgaaatgtagcatgcagagcgattct 606 ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 507 tgtacccgtgcaaattaataatgtgcggtcctgccggaatatagcatgcagagcgattct 566 Query: 607 taacctggaagataaattttgcagacgctgttcatgctgtatatgtttcaagtatgatga 666 || | |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 567 tagcatggaagataaattttgcagacgctgttcatgctgcatatgcttcaagtatgatga 626 Query: 667 taacaaggaccctacagtatggttgtcctgtagttcagatcatcccatgcaaaaggattc 726 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 caacaaggaccctaccatatggttgtcctgtagttcagatcatcccatgcaaaaggattc 686 Query: 727 ttgcgggttatcatgccatcttgagtgtgctctcaaggatggaagaaccggcatcctgcc 786 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 687 ttgcgggttatcatgccatcttgagtgtgctctcaaggatggaagaactggcattctgcc 746 Query: 787 gagtggccagtgcaagaaacttgatggtgcttattactgccctcgctgtcggaagcagcg 846 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 747 gagtgggcagtgcaagaaacttgatggtgcttattactgccctaactgtcggaagcagca 806 Query: 847 tgatttgctcgggtcctggaagaaacaactagtgtttgctagagaggctcggcggctgga 906 |||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||| Sbjct: 807 tgatttgctcaggtcctggaagaaacaactaatgttagctaaagaggctcggcggctgga 866 Query: 907 tatattgtgttaccggatttttctggctcataaggtcctcttctcgacggagaagtactc 966 |||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| Sbjct: 867 tatattgtgttaccggatttttctgggtcataaggtcctcttctccaccgagaagtactc 926 Query: 967 gatcttgcataaatttgttgacacagcaaagcagaagcttgaggctgaggttggatctgt 1026 | ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 927 ggtcttgcataaatttgttgacatagcaaagcagaaacttgaggctgaggttggatctgt 986 Query: 1027 agccgggtatggaaatatgggtcgtggaattgtcagtcggcttacttgtggtgctgaagt 1086 ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 987 agccgggcatggaagtatgggtcgtggaattgtcagtcgtcttacttgtggtgctgaagt 1046 Query: 1087 tcagaaactttgtgctgacgcactagatgtgatgaagtctaagttcccagttgaatctcc 1146 |||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||||| Sbjct: 1047 tcagaaactttgtgctgaggcactagatgtcatgcagtctaagttccctgttgaatctcc 1106 Query: 1147 tactaactcacaatttgagcgatccaagatgatgccattgagcttcatgaagtttgaacc 1206 |||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| Sbjct: 1107 tactaactcacaatttgaacgatccaatatgatgccatcgagcttcataaagtttgaacc 1166 Query: 1207 tataacgcctacatctatcactgtagcttttgatttgggtcgatgtccttatatcgctca 1266 |||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||| | || Sbjct: 1167 tataactcctacatctatcactgtagtttttgatttggctcgatgtccttacatctccca 1226 Query: 1267 aggggtaactggctttaaactatggcaccaggtggagggtacaggattttacttggcaaa 1326 ||||||||||||||||||| |||||||||||||||| |||||||| ||||||| | ||| Sbjct: 1227 aggggtaactggctttaaagtatggcaccaggtggatggtacagggttttactcgttaaa 1286 Query: 1327 cccaactggcatcgtacctgtaacgtcaaaaacatttgttgtcactgaactcacgccagg 1386 |||||||||| ||||| | ||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1287 tccaactggcaccgtacatctaatgtcaaaaacatttgttgtcactgcactcaagccagc 1346 Query: 1387 tacatgctatattttcaaggtaactgcattcagcaactccagtgagtttgagacatggga 1446 |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1347 tacatgctatatgatcaaggtaactgcattcagcaactccagtgagtttgtgccatggga 1406 Query: 1447 agccagggtatgtacaagctctctgaaagaaaatgacctgaagggtttggttccaggtgg 1506 |||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1407 agccagggtaagtacaagctctctgaaagaaagtgatctgaagggtttggctccaggtgg 1466 Query: 1507 tgctggattagtagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctga 1566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1467 tgctggattagtagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctga 1526 Query: 1567 tcgttcttcagagggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaa 1626 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1527 tcgttcttcagagggagttgactcaaacaataatgcaacagtgtacactgatcttaacaa 1586 Query: 1627 gtcacctgaaagtgattttgaggactgtgaaaatcctgagatccttgattcagacaaagt 1686 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1587 gtcaccggaaagtgattttgagtactgtgaaaatcctgagatccttgattcagacaaagt 1646 Query: 1687 gcctcatcactccaacgggcctagcaataacttgcaaaacatgcagatagttgcagctag 1746 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 gcctcatcatcccaacgggcctagcaataacttgcaaaacatgcagatagttgcagctag 1706 Query: 1747 gttaccagaggtcactgaactggaggaagctcctgggctctcagcatcagctttggatga 1806 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1707 ggtaccagaggtcactgaactggaggaagctcctgggctctcagcgtcagctttggatga 1766 Query: 1807 ggagcctaattcaacagttgaagctgctttacttagggagtcatcaaactcaatggagca 1866 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 1767 ggagcctaattcaacagttcaagctgctttacttagggagtcttcaaactcaatggagca 1826 Query: 1867 aaaccaaagaagcgaagttcctatatcacaggatgcatcaaatgctactactggagttga 1926 ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1827 aaaccaaaggagcgaagttcctatatcacaggatgcatcaaatgcaactgctggagttga 1886 Query: 1927 gttggcgcttgttcctcgatttgttggctctatgccacccactgcaccaagagtcatgga 1986 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1887 gttggctcttgttcctcgatttgttggctctatgccacccactgcaccaagagttatgga 1946 Query: 1987 aactggtaaggagactggtggaaggagcttcaacacgaagccttctgacaacatctttca 2046 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1947 aactggtaaggagactggtggaaggagcttcaacacaaaaccttctgacaacatctttca 2006 Query: 2047 gaatggctcttcaaagcccgaaagagagccagggaattcgtcgaacaaaagatcgggtaa 2106 |||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 2007 aaatggctcctcaaagcctgatagagagccagggaattcgtcaaacaaaagatcgggtaa 2066 Query: 2107 attcgaggatgctggccacaaggatggatgccctgaagcaacttatgagtactgtgtcaa 2166 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2067 attcgaggatgctggccacaaggatggatgccccgaagcaacttatgagtactgtgtcag 2126 Query: 2167 ggtggtgaggtggctggagactgagggctatattgagaccaacttcagggtgaagttctt 2226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2127 ggtggtgaggtggctggagactgagggctatattgagaccaacttcagggtgaagttctt 2186 Query: 2227 gacatggtacagcttgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaa 2286 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 2187 gacatggtacagcttgcgtgctaccccgcatgatcggaagattgtcagcgtgtacgtgga 2246 Query: 2287 caccctcattgatgatcctgtatgcctctgtggccagctcaccgacaccttctcggaggc 2346 ||||||||| ||||||||| | ||||||| |||||||| |||||||||||||||||||| Sbjct: 2247 caccctcatcaatgatcctgcaagcctctgcggccagctgaccgacaccttctcggaggc 2306 Query: 2347 gatctacagcaagaagccgccttcagtcccctctggcttctgcatgaacctgtggcattg 2406 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2307 gatctacagcaagaagccgccttcagtcccctctggcttctgcatgaacctctggcatta 2366 Query: 2407 agcgcgatggaagctgt 2423 ||||||| ||||||||| Sbjct: 2367 agcgcgacggaagctgt 2383
>gb|DQ886920.1| Triticum monococcum subsp. monococcum VIL2 protein (VIL2) gene, complete cds Length = 4968 Score = 2232 bits (1126), Expect = 0.0 Identities = 1372/1455 (94%), Gaps = 8/1455 (0%) Strand = Plus / Plus Query: 1167 gatccaagatgatgccattgagcttcatgaagtttgaacctataacgcctacatctatca 1226 ||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 3211 gatccaatatgatgccatcgagcttcataaagtttgaacctataactcctacatctatca 3270 Query: 1227 ctgtagcttttgatttgggtcgatgtccttatatcgctcaaggggtaactggctttaaac 1286 |||||| ||||||||||| |||||||||||| ||| | ||||||||||||||||||||| Sbjct: 3271 ctgtagtttttgatttggctcgatgtccttacatctcccaaggggtaactggctttaaag 3330 Query: 1287 tatggcaccaggtggagggtacaggattttacttggcaaacccaactggcatcgtacctg 1346 |||||||||||||||| |||||||| ||||||| | ||| |||||||||| ||||| | Sbjct: 3331 tatggcaccaggtggatggtacagggttttactcgttaaatccaactggcaccgtacatc 3390 Query: 1347 taacgtcaaaaacatttgttgtcactgaactcacgccaggtacatgctatattttcaagg 1406 ||| ||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||| Sbjct: 3391 taatgtcaaaaacatttgttgtcactgcactcaagccagctacatgctatatgatcaagg 3450 Query: 1407 taactgcattcagcaactccagtgagtttgagacatgggaagccagggtatgtacaagct 1466 |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 3451 taactgcattcagcaactccagtgagtttgtgccatgggaagccagggtaagtacaagct 3510 Query: 1467 ctctgaaagaaaatgacctgaagggtttggttccaggtggtgctggattagtagaccaaa 1526 |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3511 ctctgaaagaaagtgatctgaagggtttggctccaggtggtgctggattagtagaccaaa 3570 Query: 1527 ataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcagagggtgttg 1586 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3571 ataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcagagggagttg 3630 Query: 1587 actcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaagtgattttg 1646 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 3631 actcaaacaataatgcaacagtgtacactgatcttaacaagtcaccggaaagtgattttg 3690 Query: 1647 aggactgtgaaaatcctgagatccttgattcagacaaagtgcctcatcactccaacgggc 1706 || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3691 agtactgtgaaaatcctgagatccttgattcagacaaagtgcctcatcatcccaacgggc 3750 Query: 1707 ctagcaataacttgcaaaacatgcagatagttgcagctaggttaccagaggtcactgaac 1766 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3751 ctagcaataacttgcaaaacatgcagatagttgcagctagggtaccagaggtcactgaac 3810 Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3811 tggaggaagctcctgggctctcagcgtcagctttggatgaggagcctaattcaacagttc 3870 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 3871 aagctgctttacttagggagtcttcaaactcaatggagcaaaaccaaaggagcgaagttc 3930 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcctcgat 1946 ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 3931 ctatatcacaggatgcatcaaatgcaactgctggagttgagttggctcttgttcctcgat 3990 Query: 1947 ttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactggtg 2006 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3991 ttgttggctctatgccacccactgcaccaagagttatggaaactggtaaggagactggtg 4050 Query: 2007 gaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagcccg 2066 |||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| | Sbjct: 4051 gaaggagcttcaacacaaaaccttctgacaacatctttcaaaatggctcctcaaagcctg 4110 Query: 2067 aaagagagccagggaattcgtcgaacaaaagatcgggtaaattcgaggatgctggccaca 2126 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4111 atagagagccagggaattcgtcaaacaaaagatcgggtaaattcgaggatgctggccaca 4170 Query: 2127 aggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggctggaga 2186 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4171 aggatggatgccccgaagcaacttatgagtactgtgtcagggtggtgaggtggctggaga 4230 Query: 2187 ctgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagcttgcgtg 2246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4231 ctgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagcttgcgtg 4290 Query: 2247 ctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatgatcctg 2306 |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4291 ctaccccgcatgatcggaagattgtcagcgtgtacgtggacaccctcatcaatgatcctg 4350 Query: 2307 tatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaagaagccgc 2366 | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4351 caagcctctgcggccagctgaccgacaccttctcggaggcgatctacagcaagaagccgc 4410 Query: 2367 cttcagtcccctctggcttctgcatgaacctgtggcattgagcgcgatggaagctgttac 2426 ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| || Sbjct: 4411 cttcagtcccctctggcttctgcatgaacctctggcattaagcgcgacggaagctgtcac 4470 Query: 2427 cgccttgtctttccggggagggtgcgtgtcttggtcccattctttggtagctgatcgatc 2486 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 4471 cgccttctctttccggggagggtgcgtgccttggtcccattctttcgtagcagatcgatc 4530 Query: 2487 gttgcattgattcttcattggagatttcattgaagcagtagttgacttatatacaatgtg 2546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4531 gttgcattgattcttcattggagatttcattgaagcagtagttgacttatatacaatgtg 4590 Query: 2547 ttgttggttgtaaccttgtctgtctgtctgtcggctgttaccgtaggaggtttattttac 2606 |||||||||||||||||||| |||| || ||||||||||||||||||| |||| Sbjct: 4591 ttgttggttgtaaccttgtc--------tgtccgccgttaccgtaggaggtttatgttac 4642 Query: 2607 ctggtaccttatttc 2621 |||| |||||||||| Sbjct: 4643 ctggcaccttatttc 4657 Score = 1090 bits (550), Expect = 0.0 Identities = 652/686 (95%) Strand = Plus / Plus Query: 171 caggagctattattgaacctgctaaatgccgattgatgagtgtggaggaaaagcgggatc 230 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 1640 caggagctattattgaacctgctaaatgccgattgatgagtgtggatgaaaagaaggatc 1699 Query: 231 ttgttcgtgaattatcaaagaggccacaaagtgctcctgacaaactacagtcatggagtc 290 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1700 ttgttcgtgaattatcgaagaggccacaaactgctcctgacaaactacagtcatggagtc 1759 Query: 291 ggcgtgatattgtggatatcctttgtgctgatctcggaagggaaaggaaatatactggac 350 ||||||||||||| || || |||||||||||||| |||||||||||||||||||||||| Sbjct: 1760 ggcgtgatattgtagagattctttgtgctgatcttggaagggaaaggaaatatactggat 1819 Query: 351 tatctaagcagagaatgctggattatctcttcagggtggtgactggcaaatcatctggcc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1820 tatctaagcagagaatgctggattatctcttcagggtggtgactggcaaatcatctggcc 1879 Query: 411 ctgtggtgcatgtgcaagagaaggagccaactcttgatcccaacgcaagtaaccatcagt 470 ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 1880 ctgtggtgcatgtgcaagaaaaggagccaactctcgatcccaacacaagtaaccatcagt 1939 Query: 471 accccgcgaaacgtcaaaggaagagtgacaatccatcacgattgccaattgttgtcaaca 530 ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| Sbjct: 1940 accccgcgaaacgtcaaaggaagagtgacaatccatcacgactgccgattgctgtcaaca 1999 Query: 531 atccgctaaccgctgttgtacccgtgccaattaataatgtgcggtcctgccgaaatgtag 590 |||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||| ||| Sbjct: 2000 atccgcaaaccgcagttgtacccgtgcaaattaataatgtgcggtcctgccggaatatag 2059 Query: 591 catgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgtatat 650 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| Sbjct: 2060 catgcagagcgattcttagcatggaagataaattttgcagacgctgttcatgctgcatat 2119 Query: 651 gtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatcatc 710 | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2120 gcttcaagtatgatgacaacaaggaccctaccatatggttgtcctgtagttcagatcatc 2179 Query: 711 ccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatggaa 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2180 ccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatggaa 2239 Query: 771 gaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgccctc 830 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2240 gaactggcattctgccgagtgggcagtgcaagaaacttgatggtgcttattactgcccta 2299 Query: 831 gctgtcggaagcagcgtgatttgctc 856 |||||||||||||| |||||||||| Sbjct: 2300 actgtcggaagcagcatgatttgctc 2325 Score = 482 bits (243), Expect = e-132 Identities = 291/307 (94%) Strand = Plus / Plus Query: 858 ggtcctggaagaaacaactagtgtttgctagagaggctcggcggctggatatattgtgtt 917 |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| Sbjct: 2824 ggtcctggaagaaacaactaatgttagctaaagaggctcggcggctggatatattgtgtt 2883 Query: 918 accggatttttctggctcataaggtcctcttctcgacggagaagtactcgatcttgcata 977 ||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||| Sbjct: 2884 accggatttttctgggtcataaggtcctcttctccaccgagaagtactcggtcttgcata 2943 Query: 978 aatttgttgacacagcaaagcagaagcttgaggctgaggttggatctgtagccgggtatg 1037 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 2944 aatttgttgacatagcaaagcagaaacttgaggctgaggttggatctgtagccgggcatg 3003 Query: 1038 gaaatatgggtcgtggaattgtcagtcggcttacttgtggtgctgaagttcagaaacttt 1097 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3004 gaagtatgggtcgtggaattgtcagtcgtcttacttgtggtgctgaagttcagaaacttt 3063 Query: 1098 gtgctgacgcactagatgtgatgaagtctaagttcccagttgaatctcctactaactcac 1157 ||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||| Sbjct: 3064 gtgctgaggcactagatgtcatgcagtctaagttccctgttgaatctcctactaactcac 3123 Query: 1158 aatttga 1164 ||||||| Sbjct: 3124 aatttga 3130 Score = 87.7 bits (44), Expect = 2e-13 Identities = 47/48 (97%) Strand = Plus / Plus Query: 127 atcccgctctccctccctctctccggccatggatcctccctacgcagg 174 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 atccccctctccctccctctctccggccatggatcctccctacgcagg 134
>ref|NM_001052453.1| Oryza sativa (japonica cultivar-group) Os02g0152500 (Os02g0152500) mRNA, complete cds Length = 3092 Score = 387 bits (195), Expect = e-103 Identities = 435/515 (84%) Strand = Plus / Plus Query: 588 tagcatgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgta 647 |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 596 tagcttgcagagcgactcttaatccagaagataaattttgcagacgctgttcatgctgta 655 Query: 648 tatgtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatc 707 | ||||||||||| ||||| || ||||| |||| | ||||| | |||||||||||||| Sbjct: 656 tttgtttcaagtacgatgacaataaggatcctagcctctggttattctgtagttcagatc 715 Query: 708 atcccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatg 767 | ||| |||| || |||||||| | || || ||||||||||| |||||||| ||||||| Sbjct: 716 aacccttgcagaaagattcttgtgtattttcgtgccatcttgaatgtgctcttaaggatg 775 Query: 768 gaagaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgcc 827 ||||||| |||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 776 gaagaactggcatcatgcagagtgggcagtgcaagaaacttgatggtggttattactgca 835 Query: 828 ctcgctgtcggaagcagcgtgatttgctcgggtcctggaagaaacaactagtgtttgcta 887 ||||||||||||| ||| |||| |||| |||||||||||||||||||| ||| | |||| Sbjct: 836 ctcgctgtcggaaacagaatgatctgcttgggtcctggaagaaacaactggtgatagcta 895 Query: 888 gagaggctcggcggctggatatattgtgttaccggatttttctggctcataaggtcctct 947 ||| ||||| ||| ||||| |||||||| | ||||||||| || ||||||| | || Sbjct: 896 aagatgctcgccggttggatgtattgtgtcatcggatttttttgagtcataagattcttg 955 Query: 948 tctcgacggagaagtactcgatcttgcataaatttgttgacacagcaaagcagaagcttg 1007 |||| ||||||||||||| | | |||||| || ||||||||||||| | | |||| || | Sbjct: 956 tctccacggagaagtacttggttttgcatgaaattgttgacacagcgatgaagaaactgg 1015 Query: 1008 aggctgaggttggatctgtagccgggtatggaaatatgggtcgtggaattgtcagtcggc 1067 ||||||||||||| || || | || || ||||||||||||||||||||| || |||| Sbjct: 1016 aggctgaggttggtcctatatctggagttgcaaatatgggtcgtggaattgtgagccggc 1075 Query: 1068 ttacttgtggtgctgaagttcagaaactttgtgct 1102 || || |||||||||||||||||||||||||||| Sbjct: 1076 ttgctgttggtgctgaagttcagaaactttgtgct 1110 Score = 351 bits (177), Expect = 8e-93 Identities = 529/645 (82%), Gaps = 6/645 (0%) Strand = Plus / Plus Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 |||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||| Sbjct: 1763 tggaggaagctcctggactctcagcatcagctttggacgaggagcccaattcagcagttc 1822 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 || | |||||||| || || ||||| ||||||||||| ||||| ||||||||||||| Sbjct: 1823 aaacacaattacttagagaatcctcaaattcaatggagcagaaccagagaagcgaagttc 1882 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcc---tc 1943 || |||||||||||||||||||||| || ||||| |||| ||| | ||||||| || Sbjct: 1883 ctggatcacaggatgcatcaaatgctcctgctggaaatgaggtggtgattgttccacctc 1942 Query: 1944 gatttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactg 2003 ||| | ||||||||| ||||| |||||||| ||| ||||||| ||||||||| | Sbjct: 1943 gatattctggctctattccaccaactgcacctagatatatggaaaatggtaaggatatca 2002 Query: 2004 gtggaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagc 2063 |||| |||||||| || | || ||| ||| |||||| |||| ||||||||||| |||| Sbjct: 2003 gtgggaggagcttgaaagcaaaacctggtgataacatccttcaaaatggctcttccaagc 2062 Query: 2064 ccgaaagagagccagggaattcgtcgaacaaaaga---tcgggtaaattcgaggatgctg 2120 | ||||| || ||||||||||| || || |||||| || ||||||| ||||| | Sbjct: 2063 ctgaaagggaaccagggaattcttcaaataaaagaacatcaggtaaatgtgaggaaatcg 2122 Query: 2121 gccacaaggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggc 2180 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 2123 gccacaaggatggatgcccagaagcatcttatgagtactgtgttaaggtggtcaggtggc 2182 Query: 2181 tggagactgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagct 2240 |||| |||||| || ||||||||||||||||| |||||||| |||| ||||| ||| Sbjct: 2183 tggaatgtgagggttacattgagaccaacttcagagtgaagtttctgacttggtatagcc 2242 Query: 2241 tgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatg 2300 | ||||||||||| || || ||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 2243 ttcgtgctacccctcatgacaggaagatagtcagcgtctacgtaaacactcttattgatg 2302 Query: 2301 atcctgtatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaaga 2360 ||||||| |||| | ||||||||| | ||||| ||||| ||||| ||||||||||| | Sbjct: 2303 atcctgttagcctttctggccagcttgctgacactttctctgaggccatctacagcaaaa 2362 Query: 2361 agccgccttcagtcccctctggcttctgcatgaacctgtggcatt 2405 ||| ||||| || | ||| || ||||||||| | || ||||||| Sbjct: 2363 ggccaccttctgttcgctccggtttctgcatggaactttggcatt 2407 Score = 317 bits (160), Expect = 1e-82 Identities = 324/379 (85%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 152 gccatggatcctccctacgcaggagctattattgaacctgctaaatgccgattgatgagt 211 ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 157 gccatggatccaccctacgcaggagtacctattgatcctgctaaatgccgattgatgagt 216 Query: 212 gtggaggaaaagcgggatcttgttcgtgaattatcaaagaggccacaaagtgctcctgac 271 ||||| ||||||||||| ||||| ||||||||||| ||| ||||| |||||||||||||| Sbjct: 217 gtggatgaaaagcgggaacttgtccgtgaattatcgaagcggccagaaagtgctcctgac 276 Query: 272 aaactacagtcatggagtcggcgtgatattgtggatatcctttgtgctgatctcggaagg 331 ||||| ||||| |||||||| ||||| ||||| || || |||||||||||| | |||||| Sbjct: 277 aaactgcagtcttggagtcgccgtgaaattgtagagattctttgtgctgatttaggaagg 336 Query: 332 gaaaggaaatatactggactatctaagcagagaatgctggattatctcttcagggtggtg 391 |||||||| || |||||| |||| |||||||||||| |||| ||||||||||| || ||| Sbjct: 337 gaaaggaagtacactggattatcgaagcagagaatgttggaatatctcttcagagttgtg 396 Query: 392 actggcaaatcatc------tggccctgtggtgcatgtgcaagagaaggagccaactctt 445 |||||||||||||| |||| ||||| ||||||||||||||||||||| || | | Sbjct: 397 actggcaaatcatctggtggtggcgttgtggagcatgtgcaagagaaggagcctacccct 456 Query: 446 gatcccaacgcaagtaaccatcagtaccccgcgaaacgtcaaaggaagagtgacaatcca 505 || |||||| || |||||||||| ||| |||||||| || | ||||||||||| ||| Sbjct: 457 gaacccaacacagccaaccatcagtcccctgcgaaacggcagcgaaagagtgacaaccca 516 Query: 506 tcacgattgccaattgttg 524 |||||| | |||||||||| Sbjct: 517 tcacgactaccaattgttg 535 Score = 143 bits (72), Expect = 4e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 1518 tagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcag 1577 |||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 1514 tagaccaaaacaatgggagcccaaaggcaaacagtggtggtcagtctgatccttcttcag 1573 Query: 1578 agggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaa 1637 | ||||| |||||||| ||||| | | |||||| ||||||| || || ||||| |||| Sbjct: 1574 aaggtgtggactcaaataataacactgcggtgtatgctgatctcaataaatcaccagaaa 1633 Query: 1638 gtgattttgaggactgtgaaaatcctgagatccttgattcagacaaag 1685 |||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 1634 gtgattttgaatattgtgaaaatcctgagatacttgattcagacaaag 1681 Score = 73.8 bits (37), Expect = 3e-09 Identities = 59/66 (89%), Gaps = 4/66 (6%) Strand = Plus / Plus Query: 2457 ttggtcccattctttggtagctgatcgatcgttgcattgattcttcattggagatttcat 2516 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 2453 ttggtcccattctttcgtagc----agatcgttgcattgattcttcattggaaatttcat 2508 Query: 2517 tgaagc 2522 |||||| Sbjct: 2509 tgaagc 2514
>dbj|AK101341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J20, full insert sequence Length = 3092 Score = 387 bits (195), Expect = e-103 Identities = 435/515 (84%) Strand = Plus / Plus Query: 588 tagcatgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgta 647 |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 596 tagcttgcagagcgactcttaatccagaagataaattttgcagacgctgttcatgctgta 655 Query: 648 tatgtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatc 707 | ||||||||||| ||||| || ||||| |||| | ||||| | |||||||||||||| Sbjct: 656 tttgtttcaagtacgatgacaataaggatcctagcctctggttattctgtagttcagatc 715 Query: 708 atcccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatg 767 | ||| |||| || |||||||| | || || ||||||||||| |||||||| ||||||| Sbjct: 716 aacccttgcagaaagattcttgtgtattttcgtgccatcttgaatgtgctcttaaggatg 775 Query: 768 gaagaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgcc 827 ||||||| |||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 776 gaagaactggcatcatgcagagtgggcagtgcaagaaacttgatggtggttattactgca 835 Query: 828 ctcgctgtcggaagcagcgtgatttgctcgggtcctggaagaaacaactagtgtttgcta 887 ||||||||||||| ||| |||| |||| |||||||||||||||||||| ||| | |||| Sbjct: 836 ctcgctgtcggaaacagaatgatctgcttgggtcctggaagaaacaactggtgatagcta 895 Query: 888 gagaggctcggcggctggatatattgtgttaccggatttttctggctcataaggtcctct 947 ||| ||||| ||| ||||| |||||||| | ||||||||| || ||||||| | || Sbjct: 896 aagatgctcgccggttggatgtattgtgtcatcggatttttttgagtcataagattcttg 955 Query: 948 tctcgacggagaagtactcgatcttgcataaatttgttgacacagcaaagcagaagcttg 1007 |||| ||||||||||||| | | |||||| || ||||||||||||| | | |||| || | Sbjct: 956 tctccacggagaagtacttggttttgcatgaaattgttgacacagcgatgaagaaactgg 1015 Query: 1008 aggctgaggttggatctgtagccgggtatggaaatatgggtcgtggaattgtcagtcggc 1067 ||||||||||||| || || | || || ||||||||||||||||||||| || |||| Sbjct: 1016 aggctgaggttggtcctatatctggagttgcaaatatgggtcgtggaattgtgagccggc 1075 Query: 1068 ttacttgtggtgctgaagttcagaaactttgtgct 1102 || || |||||||||||||||||||||||||||| Sbjct: 1076 ttgctgttggtgctgaagttcagaaactttgtgct 1110 Score = 351 bits (177), Expect = 8e-93 Identities = 529/645 (82%), Gaps = 6/645 (0%) Strand = Plus / Plus Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 |||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||| Sbjct: 1763 tggaggaagctcctggactctcagcatcagctttggacgaggagcccaattcagcagttc 1822 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 || | |||||||| || || ||||| ||||||||||| ||||| ||||||||||||| Sbjct: 1823 aaacacaattacttagagaatcctcaaattcaatggagcagaaccagagaagcgaagttc 1882 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcc---tc 1943 || |||||||||||||||||||||| || ||||| |||| ||| | ||||||| || Sbjct: 1883 ctggatcacaggatgcatcaaatgctcctgctggaaatgaggtggtgattgttccacctc 1942 Query: 1944 gatttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactg 2003 ||| | ||||||||| ||||| |||||||| ||| ||||||| ||||||||| | Sbjct: 1943 gatattctggctctattccaccaactgcacctagatatatggaaaatggtaaggatatca 2002 Query: 2004 gtggaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagc 2063 |||| |||||||| || | || ||| ||| |||||| |||| ||||||||||| |||| Sbjct: 2003 gtgggaggagcttgaaagcaaaacctggtgataacatccttcaaaatggctcttccaagc 2062 Query: 2064 ccgaaagagagccagggaattcgtcgaacaaaaga---tcgggtaaattcgaggatgctg 2120 | ||||| || ||||||||||| || || |||||| || ||||||| ||||| | Sbjct: 2063 ctgaaagggaaccagggaattcttcaaataaaagaacatcaggtaaatgtgaggaaatcg 2122 Query: 2121 gccacaaggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggc 2180 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 2123 gccacaaggatggatgcccagaagcatcttatgagtactgtgttaaggtggtcaggtggc 2182 Query: 2181 tggagactgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagct 2240 |||| |||||| || ||||||||||||||||| |||||||| |||| ||||| ||| Sbjct: 2183 tggaatgtgagggttacattgagaccaacttcagagtgaagtttctgacttggtatagcc 2242 Query: 2241 tgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatg 2300 | ||||||||||| || || ||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 2243 ttcgtgctacccctcatgacaggaagatagtcagcgtctacgtaaacactcttattgatg 2302 Query: 2301 atcctgtatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaaga 2360 ||||||| |||| | ||||||||| | ||||| ||||| ||||| ||||||||||| | Sbjct: 2303 atcctgttagcctttctggccagcttgctgacactttctctgaggccatctacagcaaaa 2362 Query: 2361 agccgccttcagtcccctctggcttctgcatgaacctgtggcatt 2405 ||| ||||| || | ||| || ||||||||| | || ||||||| Sbjct: 2363 ggccaccttctgttcgctccggtttctgcatggaactttggcatt 2407 Score = 317 bits (160), Expect = 1e-82 Identities = 324/379 (85%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 152 gccatggatcctccctacgcaggagctattattgaacctgctaaatgccgattgatgagt 211 ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 157 gccatggatccaccctacgcaggagtacctattgatcctgctaaatgccgattgatgagt 216 Query: 212 gtggaggaaaagcgggatcttgttcgtgaattatcaaagaggccacaaagtgctcctgac 271 ||||| ||||||||||| ||||| ||||||||||| ||| ||||| |||||||||||||| Sbjct: 217 gtggatgaaaagcgggaacttgtccgtgaattatcgaagcggccagaaagtgctcctgac 276 Query: 272 aaactacagtcatggagtcggcgtgatattgtggatatcctttgtgctgatctcggaagg 331 ||||| ||||| |||||||| ||||| ||||| || || |||||||||||| | |||||| Sbjct: 277 aaactgcagtcttggagtcgccgtgaaattgtagagattctttgtgctgatttaggaagg 336 Query: 332 gaaaggaaatatactggactatctaagcagagaatgctggattatctcttcagggtggtg 391 |||||||| || |||||| |||| |||||||||||| |||| ||||||||||| || ||| Sbjct: 337 gaaaggaagtacactggattatcgaagcagagaatgttggaatatctcttcagagttgtg 396 Query: 392 actggcaaatcatc------tggccctgtggtgcatgtgcaagagaaggagccaactctt 445 |||||||||||||| |||| ||||| ||||||||||||||||||||| || | | Sbjct: 397 actggcaaatcatctggtggtggcgttgtggagcatgtgcaagagaaggagcctacccct 456 Query: 446 gatcccaacgcaagtaaccatcagtaccccgcgaaacgtcaaaggaagagtgacaatcca 505 || |||||| || |||||||||| ||| |||||||| || | ||||||||||| ||| Sbjct: 457 gaacccaacacagccaaccatcagtcccctgcgaaacggcagcgaaagagtgacaaccca 516 Query: 506 tcacgattgccaattgttg 524 |||||| | |||||||||| Sbjct: 517 tcacgactaccaattgttg 535 Score = 143 bits (72), Expect = 4e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 1518 tagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcag 1577 |||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 1514 tagaccaaaacaatgggagcccaaaggcaaacagtggtggtcagtctgatccttcttcag 1573 Query: 1578 agggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaa 1637 | ||||| |||||||| ||||| | | |||||| ||||||| || || ||||| |||| Sbjct: 1574 aaggtgtggactcaaataataacactgcggtgtatgctgatctcaataaatcaccagaaa 1633 Query: 1638 gtgattttgaggactgtgaaaatcctgagatccttgattcagacaaag 1685 |||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 1634 gtgattttgaatattgtgaaaatcctgagatacttgattcagacaaag 1681 Score = 73.8 bits (37), Expect = 3e-09 Identities = 59/66 (89%), Gaps = 4/66 (6%) Strand = Plus / Plus Query: 2457 ttggtcccattctttggtagctgatcgatcgttgcattgattcttcattggagatttcat 2516 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 2453 ttggtcccattctttcgtagc----agatcgttgcattgattcttcattggaaatttcat 2508 Query: 2517 tgaagc 2522 |||||| Sbjct: 2509 tgaagc 2514
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 351 bits (177), Expect = 8e-93 Identities = 529/645 (82%), Gaps = 6/645 (0%) Strand = Plus / Minus Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 |||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||| Sbjct: 2877888 tggaggaagctcctggactctcagcatcagctttggacgaggagcccaattcagcagttc 2877829 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 || | |||||||| || || ||||| ||||||||||| ||||| ||||||||||||| Sbjct: 2877828 aaacacaattacttagagaatcctcaaattcaatggagcagaaccagagaagcgaagttc 2877769 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcc---tc 1943 || |||||||||||||||||||||| || ||||| |||| ||| | ||||||| || Sbjct: 2877768 ctggatcacaggatgcatcaaatgctcctgctggaaatgaggtggtgattgttccacctc 2877709 Query: 1944 gatttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactg 2003 ||| | ||||||||| ||||| |||||||| ||| ||||||| ||||||||| | Sbjct: 2877708 gatattctggctctattccaccaactgcacctagatatatggaaaatggtaaggatatca 2877649 Query: 2004 gtggaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagc 2063 |||| |||||||| || | || ||| ||| |||||| |||| ||||||||||| |||| Sbjct: 2877648 gtgggaggagcttgaaagcaaaacctggtgataacatccttcaaaatggctcttccaagc 2877589 Query: 2064 ccgaaagagagccagggaattcgtcgaacaaaaga---tcgggtaaattcgaggatgctg 2120 | ||||| || ||||||||||| || || |||||| || ||||||| ||||| | Sbjct: 2877588 ctgaaagggaaccagggaattcttcaaataaaagaacatcaggtaaatgtgaggaaatcg 2877529 Query: 2121 gccacaaggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggc 2180 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 2877528 gccacaaggatggatgcccagaagcatcttatgagtactgtgttaaggtggtcaggtggc 2877469 Query: 2181 tggagactgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagct 2240 |||| |||||| || ||||||||||||||||| |||||||| |||| ||||| ||| Sbjct: 2877468 tggaatgtgagggttacattgagaccaacttcagagtgaagtttctgacttggtatagcc 2877409 Query: 2241 tgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatg 2300 | ||||||||||| || || ||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 2877408 ttcgtgctacccctcatgacaggaagatagtcagcgtctacgtaaacactcttattgatg 2877349 Query: 2301 atcctgtatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaaga 2360 ||||||| |||| | ||||||||| | ||||| ||||| ||||| ||||||||||| | Sbjct: 2877348 atcctgttagcctttctggccagcttgctgacactttctctgaggccatctacagcaaaa 2877289 Query: 2361 agccgccttcagtcccctctggcttctgcatgaacctgtggcatt 2405 ||| ||||| || | ||| || ||||||||| | || ||||||| Sbjct: 2877288 ggccaccttctgttcgctccggtttctgcatggaactttggcatt 2877244 Score = 299 bits (151), Expect = 3e-77 Identities = 300/350 (85%), Gaps = 6/350 (1%) Strand = Plus / Minus Query: 181 tattgaacctgctaaatgccgattgatgagtgtggaggaaaagcgggatcttgttcgtga 240 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 2880542 tattgatcctgctaaatgccgattgatgagtgtggatgaaaagcgggaacttgtccgtga 2880483 Query: 241 attatcaaagaggccacaaagtgctcctgacaaactacagtcatggagtcggcgtgatat 300 |||||| ||| ||||| ||||||||||||||||||| ||||| |||||||| ||||| || Sbjct: 2880482 attatcgaagcggccagaaagtgctcctgacaaactgcagtcttggagtcgccgtgaaat 2880423 Query: 301 tgtggatatcctttgtgctgatctcggaagggaaaggaaatatactggactatctaagca 360 ||| || || |||||||||||| | |||||||||||||| || |||||| |||| ||||| Sbjct: 2880422 tgtagagattctttgtgctgatttaggaagggaaaggaagtacactggattatcgaagca 2880363 Query: 361 gagaatgctggattatctcttcagggtggtgactggcaaatcatc------tggccctgt 414 ||||||| |||| ||||||||||| || ||||||||||||||||| |||| ||| Sbjct: 2880362 gagaatgttggaatatctcttcagagttgtgactggcaaatcatctggtggtggcgttgt 2880303 Query: 415 ggtgcatgtgcaagagaaggagccaactcttgatcccaacgcaagtaaccatcagtaccc 474 || ||||||||||||||||||||| || | ||| |||||| || |||||||||| ||| Sbjct: 2880302 ggagcatgtgcaagagaaggagcctacccctgaacccaacacagccaaccatcagtcccc 2880243 Query: 475 cgcgaaacgtcaaaggaagagtgacaatccatcacgattgccaattgttg 524 |||||||| || | ||||||||||| ||||||||| | |||||||||| Sbjct: 2880242 tgcgaaacggcagcgaaagagtgacaacccatcacgactaccaattgttg 2880193 Score = 240 bits (121), Expect = 2e-59 Identities = 220/253 (86%) Strand = Plus / Minus Query: 588 tagcatgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgta 647 |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 2880132 tagcttgcagagcgactcttaatccagaagataaattttgcagacgctgttcatgctgta 2880073 Query: 648 tatgtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatc 707 | ||||||||||| ||||| || ||||| |||| | ||||| | |||||||||||||| Sbjct: 2880072 tttgtttcaagtacgatgacaataaggatcctagcctctggttattctgtagttcagatc 2880013 Query: 708 atcccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatg 767 | ||| |||| || |||||||| | || || ||||||||||| |||||||| ||||||| Sbjct: 2880012 aacccttgcagaaagattcttgtgtattttcgtgccatcttgaatgtgctcttaaggatg 2879953 Query: 768 gaagaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgcc 827 ||||||| |||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 2879952 gaagaactggcatcatgcagagtgggcagtgcaagaaacttgatggtggttattactgca 2879893 Query: 828 ctcgctgtcggaa 840 ||||||||||||| Sbjct: 2879892 ctcgctgtcggaa 2879880 Score = 153 bits (77), Expect = 4e-33 Identities = 203/245 (82%) Strand = Plus / Minus Query: 858 ggtcctggaagaaacaactagtgtttgctagagaggctcggcggctggatatattgtgtt 917 ||||||||||||||||||| ||| | |||| ||| ||||| ||| ||||| |||||||| Sbjct: 2878862 ggtcctggaagaaacaactggtgatagctaaagatgctcgccggttggatgtattgtgtc 2878803 Query: 918 accggatttttctggctcataaggtcctcttctcgacggagaagtactcgatcttgcata 977 | ||||||||| || ||||||| | || |||| ||||||||||||| | | |||||| Sbjct: 2878802 atcggatttttttgagtcataagattcttgtctccacggagaagtacttggttttgcatg 2878743 Query: 978 aatttgttgacacagcaaagcagaagcttgaggctgaggttggatctgtagccgggtatg 1037 || ||||||||||||| | | |||| || |||||||||||||| || || | || || Sbjct: 2878742 aaattgttgacacagcgatgaagaaactggaggctgaggttggtcctatatctggagttg 2878683 Query: 1038 gaaatatgggtcgtggaattgtcagtcggcttacttgtggtgctgaagttcagaaacttt 1097 ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| Sbjct: 2878682 caaatatgggtcgtggaattgtgagccggcttgctgttggtgctgaagttcagaaacttt 2878623 Query: 1098 gtgct 1102 ||||| Sbjct: 2878622 gtgct 2878618 Score = 143 bits (72), Expect = 4e-30 Identities = 144/168 (85%) Strand = Plus / Minus Query: 1518 tagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcag 1577 |||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 2878137 tagaccaaaacaatgggagcccaaaggcaaacagtggtggtcagtctgatccttcttcag 2878078 Query: 1578 agggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaa 1637 | ||||| |||||||| ||||| | | |||||| ||||||| || || ||||| |||| Sbjct: 2878077 aaggtgtggactcaaataataacactgcggtgtatgctgatctcaataaatcaccagaaa 2878018 Query: 1638 gtgattttgaggactgtgaaaatcctgagatccttgattcagacaaag 1685 |||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 2878017 gtgattttgaatattgtgaaaatcctgagatacttgattcagacaaag 2877970 Score = 73.8 bits (37), Expect = 3e-09 Identities = 59/66 (89%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 2457 ttggtcccattctttggtagctgatcgatcgttgcattgattcttcattggagatttcat 2516 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 2877198 ttggtcccattctttcgtagc----agatcgttgcattgattcttcattggaaatttcat 2877143 Query: 2517 tgaagc 2522 |||||| Sbjct: 2877142 tgaagc 2877137
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 351 bits (177), Expect = 8e-93 Identities = 529/645 (82%), Gaps = 6/645 (0%) Strand = Plus / Minus Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 |||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||| Sbjct: 146116 tggaggaagctcctggactctcagcatcagctttggacgaggagcccaattcagcagttc 146057 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 || | |||||||| || || ||||| ||||||||||| ||||| ||||||||||||| Sbjct: 146056 aaacacaattacttagagaatcctcaaattcaatggagcagaaccagagaagcgaagttc 145997 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcc---tc 1943 || |||||||||||||||||||||| || ||||| |||| ||| | ||||||| || Sbjct: 145996 ctggatcacaggatgcatcaaatgctcctgctggaaatgaggtggtgattgttccacctc 145937 Query: 1944 gatttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactg 2003 ||| | ||||||||| ||||| |||||||| ||| ||||||| ||||||||| | Sbjct: 145936 gatattctggctctattccaccaactgcacctagatatatggaaaatggtaaggatatca 145877 Query: 2004 gtggaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagc 2063 |||| |||||||| || | || ||| ||| |||||| |||| ||||||||||| |||| Sbjct: 145876 gtgggaggagcttgaaagcaaaacctggtgataacatccttcaaaatggctcttccaagc 145817 Query: 2064 ccgaaagagagccagggaattcgtcgaacaaaaga---tcgggtaaattcgaggatgctg 2120 | ||||| || ||||||||||| || || |||||| || ||||||| ||||| | Sbjct: 145816 ctgaaagggaaccagggaattcttcaaataaaagaacatcaggtaaatgtgaggaaatcg 145757 Query: 2121 gccacaaggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggc 2180 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 145756 gccacaaggatggatgcccagaagcatcttatgagtactgtgttaaggtggtcaggtggc 145697 Query: 2181 tggagactgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagct 2240 |||| |||||| || ||||||||||||||||| |||||||| |||| ||||| ||| Sbjct: 145696 tggaatgtgagggttacattgagaccaacttcagagtgaagtttctgacttggtatagcc 145637 Query: 2241 tgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatg 2300 | ||||||||||| || || ||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 145636 ttcgtgctacccctcatgacaggaagatagtcagcgtctacgtaaacactcttattgatg 145577 Query: 2301 atcctgtatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaaga 2360 ||||||| |||| | ||||||||| | ||||| ||||| ||||| ||||||||||| | Sbjct: 145576 atcctgttagcctttctggccagcttgctgacactttctctgaggccatctacagcaaaa 145517 Query: 2361 agccgccttcagtcccctctggcttctgcatgaacctgtggcatt 2405 ||| ||||| || | ||| || ||||||||| | || ||||||| Sbjct: 145516 ggccaccttctgttcgctccggtttctgcatggaactttggcatt 145472 Score = 299 bits (151), Expect = 3e-77 Identities = 300/350 (85%), Gaps = 6/350 (1%) Strand = Plus / Minus Query: 181 tattgaacctgctaaatgccgattgatgagtgtggaggaaaagcgggatcttgttcgtga 240 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 148770 tattgatcctgctaaatgccgattgatgagtgtggatgaaaagcgggaacttgtccgtga 148711 Query: 241 attatcaaagaggccacaaagtgctcctgacaaactacagtcatggagtcggcgtgatat 300 |||||| ||| ||||| ||||||||||||||||||| ||||| |||||||| ||||| || Sbjct: 148710 attatcgaagcggccagaaagtgctcctgacaaactgcagtcttggagtcgccgtgaaat 148651 Query: 301 tgtggatatcctttgtgctgatctcggaagggaaaggaaatatactggactatctaagca 360 ||| || || |||||||||||| | |||||||||||||| || |||||| |||| ||||| Sbjct: 148650 tgtagagattctttgtgctgatttaggaagggaaaggaagtacactggattatcgaagca 148591 Query: 361 gagaatgctggattatctcttcagggtggtgactggcaaatcatc------tggccctgt 414 ||||||| |||| ||||||||||| || ||||||||||||||||| |||| ||| Sbjct: 148590 gagaatgttggaatatctcttcagagttgtgactggcaaatcatctggtggtggcgttgt 148531 Query: 415 ggtgcatgtgcaagagaaggagccaactcttgatcccaacgcaagtaaccatcagtaccc 474 || ||||||||||||||||||||| || | ||| |||||| || |||||||||| ||| Sbjct: 148530 ggagcatgtgcaagagaaggagcctacccctgaacccaacacagccaaccatcagtcccc 148471 Query: 475 cgcgaaacgtcaaaggaagagtgacaatccatcacgattgccaattgttg 524 |||||||| || | ||||||||||| ||||||||| | |||||||||| Sbjct: 148470 tgcgaaacggcagcgaaagagtgacaacccatcacgactaccaattgttg 148421 Score = 240 bits (121), Expect = 2e-59 Identities = 220/253 (86%) Strand = Plus / Minus Query: 588 tagcatgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgta 647 |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 148360 tagcttgcagagcgactcttaatccagaagataaattttgcagacgctgttcatgctgta 148301 Query: 648 tatgtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatc 707 | ||||||||||| ||||| || ||||| |||| | ||||| | |||||||||||||| Sbjct: 148300 tttgtttcaagtacgatgacaataaggatcctagcctctggttattctgtagttcagatc 148241 Query: 708 atcccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatg 767 | ||| |||| || |||||||| | || || ||||||||||| |||||||| ||||||| Sbjct: 148240 aacccttgcagaaagattcttgtgtattttcgtgccatcttgaatgtgctcttaaggatg 148181 Query: 768 gaagaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgcc 827 ||||||| |||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 148180 gaagaactggcatcatgcagagtgggcagtgcaagaaacttgatggtggttattactgca 148121 Query: 828 ctcgctgtcggaa 840 ||||||||||||| Sbjct: 148120 ctcgctgtcggaa 148108 Score = 153 bits (77), Expect = 4e-33 Identities = 203/245 (82%) Strand = Plus / Minus Query: 858 ggtcctggaagaaacaactagtgtttgctagagaggctcggcggctggatatattgtgtt 917 ||||||||||||||||||| ||| | |||| ||| ||||| ||| ||||| |||||||| Sbjct: 147090 ggtcctggaagaaacaactggtgatagctaaagatgctcgccggttggatgtattgtgtc 147031 Query: 918 accggatttttctggctcataaggtcctcttctcgacggagaagtactcgatcttgcata 977 | ||||||||| || ||||||| | || |||| ||||||||||||| | | |||||| Sbjct: 147030 atcggatttttttgagtcataagattcttgtctccacggagaagtacttggttttgcatg 146971 Query: 978 aatttgttgacacagcaaagcagaagcttgaggctgaggttggatctgtagccgggtatg 1037 || ||||||||||||| | | |||| || |||||||||||||| || || | || || Sbjct: 146970 aaattgttgacacagcgatgaagaaactggaggctgaggttggtcctatatctggagttg 146911 Query: 1038 gaaatatgggtcgtggaattgtcagtcggcttacttgtggtgctgaagttcagaaacttt 1097 ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| Sbjct: 146910 caaatatgggtcgtggaattgtgagccggcttgctgttggtgctgaagttcagaaacttt 146851 Query: 1098 gtgct 1102 ||||| Sbjct: 146850 gtgct 146846 Score = 143 bits (72), Expect = 4e-30 Identities = 144/168 (85%) Strand = Plus / Minus Query: 1518 tagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcag 1577 |||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 146365 tagaccaaaacaatgggagcccaaaggcaaacagtggtggtcagtctgatccttcttcag 146306 Query: 1578 agggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaa 1637 | ||||| |||||||| ||||| | | |||||| ||||||| || || ||||| |||| Sbjct: 146305 aaggtgtggactcaaataataacactgcggtgtatgctgatctcaataaatcaccagaaa 146246 Query: 1638 gtgattttgaggactgtgaaaatcctgagatccttgattcagacaaag 1685 |||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 146245 gtgattttgaatattgtgaaaatcctgagatacttgattcagacaaag 146198 Score = 73.8 bits (37), Expect = 3e-09 Identities = 59/66 (89%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 2457 ttggtcccattctttggtagctgatcgatcgttgcattgattcttcattggagatttcat 2516 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 145426 ttggtcccattctttcgtagc----agatcgttgcattgattcttcattggaaatttcat 145371 Query: 2517 tgaagc 2522 |||||| Sbjct: 145370 tgaagc 145365
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 351 bits (177), Expect = 8e-93 Identities = 529/645 (82%), Gaps = 6/645 (0%) Strand = Plus / Minus Query: 1767 tggaggaagctcctgggctctcagcatcagctttggatgaggagcctaattcaacagttg 1826 |||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||| Sbjct: 3527 tggaggaagctcctggactctcagcatcagctttggacgaggagcccaattcagcagttc 3468 Query: 1827 aagctgctttacttagggagtcatcaaactcaatggagcaaaaccaaagaagcgaagttc 1886 || | |||||||| || || ||||| ||||||||||| ||||| ||||||||||||| Sbjct: 3467 aaacacaattacttagagaatcctcaaattcaatggagcagaaccagagaagcgaagttc 3408 Query: 1887 ctatatcacaggatgcatcaaatgctactactggagttgagttggcgcttgttcc---tc 1943 || |||||||||||||||||||||| || ||||| |||| ||| | ||||||| || Sbjct: 3407 ctggatcacaggatgcatcaaatgctcctgctggaaatgaggtggtgattgttccacctc 3348 Query: 1944 gatttgttggctctatgccacccactgcaccaagagtcatggaaactggtaaggagactg 2003 ||| | ||||||||| ||||| |||||||| ||| ||||||| ||||||||| | Sbjct: 3347 gatattctggctctattccaccaactgcacctagatatatggaaaatggtaaggatatca 3288 Query: 2004 gtggaaggagcttcaacacgaagccttctgacaacatctttcagaatggctcttcaaagc 2063 |||| |||||||| || | || ||| ||| |||||| |||| ||||||||||| |||| Sbjct: 3287 gtgggaggagcttgaaagcaaaacctggtgataacatccttcaaaatggctcttccaagc 3228 Query: 2064 ccgaaagagagccagggaattcgtcgaacaaaaga---tcgggtaaattcgaggatgctg 2120 | ||||| || ||||||||||| || || |||||| || ||||||| ||||| | Sbjct: 3227 ctgaaagggaaccagggaattcttcaaataaaagaacatcaggtaaatgtgaggaaatcg 3168 Query: 2121 gccacaaggatggatgccctgaagcaacttatgagtactgtgtcaaggtggtgaggtggc 2180 ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 3167 gccacaaggatggatgcccagaagcatcttatgagtactgtgttaaggtggtcaggtggc 3108 Query: 2181 tggagactgagggctatattgagaccaacttcagggtgaagttcttgacatggtacagct 2240 |||| |||||| || ||||||||||||||||| |||||||| |||| ||||| ||| Sbjct: 3107 tggaatgtgagggttacattgagaccaacttcagagtgaagtttctgacttggtatagcc 3048 Query: 2241 tgcgtgctaccccgcacgatcggaagattgtcagcgtgtacgtgaacaccctcattgatg 2300 | ||||||||||| || || ||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 3047 ttcgtgctacccctcatgacaggaagatagtcagcgtctacgtaaacactcttattgatg 2988 Query: 2301 atcctgtatgcctctgtggccagctcaccgacaccttctcggaggcgatctacagcaaga 2360 ||||||| |||| | ||||||||| | ||||| ||||| ||||| ||||||||||| | Sbjct: 2987 atcctgttagcctttctggccagcttgctgacactttctctgaggccatctacagcaaaa 2928 Query: 2361 agccgccttcagtcccctctggcttctgcatgaacctgtggcatt 2405 ||| ||||| || | ||| || ||||||||| | || ||||||| Sbjct: 2927 ggccaccttctgttcgctccggtttctgcatggaactttggcatt 2883 Score = 299 bits (151), Expect = 3e-77 Identities = 300/350 (85%), Gaps = 6/350 (1%) Strand = Plus / Minus Query: 181 tattgaacctgctaaatgccgattgatgagtgtggaggaaaagcgggatcttgttcgtga 240 |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 6181 tattgatcctgctaaatgccgattgatgagtgtggatgaaaagcgggaacttgtccgtga 6122 Query: 241 attatcaaagaggccacaaagtgctcctgacaaactacagtcatggagtcggcgtgatat 300 |||||| ||| ||||| ||||||||||||||||||| ||||| |||||||| ||||| || Sbjct: 6121 attatcgaagcggccagaaagtgctcctgacaaactgcagtcttggagtcgccgtgaaat 6062 Query: 301 tgtggatatcctttgtgctgatctcggaagggaaaggaaatatactggactatctaagca 360 ||| || || |||||||||||| | |||||||||||||| || |||||| |||| ||||| Sbjct: 6061 tgtagagattctttgtgctgatttaggaagggaaaggaagtacactggattatcgaagca 6002 Query: 361 gagaatgctggattatctcttcagggtggtgactggcaaatcatc------tggccctgt 414 ||||||| |||| ||||||||||| || ||||||||||||||||| |||| ||| Sbjct: 6001 gagaatgttggaatatctcttcagagttgtgactggcaaatcatctggtggtggcgttgt 5942 Query: 415 ggtgcatgtgcaagagaaggagccaactcttgatcccaacgcaagtaaccatcagtaccc 474 || ||||||||||||||||||||| || | ||| |||||| || |||||||||| ||| Sbjct: 5941 ggagcatgtgcaagagaaggagcctacccctgaacccaacacagccaaccatcagtcccc 5882 Query: 475 cgcgaaacgtcaaaggaagagtgacaatccatcacgattgccaattgttg 524 |||||||| || | ||||||||||| ||||||||| | |||||||||| Sbjct: 5881 tgcgaaacggcagcgaaagagtgacaacccatcacgactaccaattgttg 5832 Score = 240 bits (121), Expect = 2e-59 Identities = 220/253 (86%) Strand = Plus / Minus Query: 588 tagcatgcagagcgattcttaacctggaagataaattttgcagacgctgttcatgctgta 647 |||| |||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 5771 tagcttgcagagcgactcttaatccagaagataaattttgcagacgctgttcatgctgta 5712 Query: 648 tatgtttcaagtatgatgataacaaggaccctacagtatggttgtcctgtagttcagatc 707 | ||||||||||| ||||| || ||||| |||| | ||||| | |||||||||||||| Sbjct: 5711 tttgtttcaagtacgatgacaataaggatcctagcctctggttattctgtagttcagatc 5652 Query: 708 atcccatgcaaaaggattcttgcgggttatcatgccatcttgagtgtgctctcaaggatg 767 | ||| |||| || |||||||| | || || ||||||||||| |||||||| ||||||| Sbjct: 5651 aacccttgcagaaagattcttgtgtattttcgtgccatcttgaatgtgctcttaaggatg 5592 Query: 768 gaagaaccggcatcctgccgagtggccagtgcaagaaacttgatggtgcttattactgcc 827 ||||||| |||||| ||| |||||| |||||||||||||||||||||| |||||||||| Sbjct: 5591 gaagaactggcatcatgcagagtgggcagtgcaagaaacttgatggtggttattactgca 5532 Query: 828 ctcgctgtcggaa 840 ||||||||||||| Sbjct: 5531 ctcgctgtcggaa 5519 Score = 153 bits (77), Expect = 4e-33 Identities = 203/245 (82%) Strand = Plus / Minus Query: 858 ggtcctggaagaaacaactagtgtttgctagagaggctcggcggctggatatattgtgtt 917 ||||||||||||||||||| ||| | |||| ||| ||||| ||| ||||| |||||||| Sbjct: 4501 ggtcctggaagaaacaactggtgatagctaaagatgctcgccggttggatgtattgtgtc 4442 Query: 918 accggatttttctggctcataaggtcctcttctcgacggagaagtactcgatcttgcata 977 | ||||||||| || ||||||| | || |||| ||||||||||||| | | |||||| Sbjct: 4441 atcggatttttttgagtcataagattcttgtctccacggagaagtacttggttttgcatg 4382 Query: 978 aatttgttgacacagcaaagcagaagcttgaggctgaggttggatctgtagccgggtatg 1037 || ||||||||||||| | | |||| || |||||||||||||| || || | || || Sbjct: 4381 aaattgttgacacagcgatgaagaaactggaggctgaggttggtcctatatctggagttg 4322 Query: 1038 gaaatatgggtcgtggaattgtcagtcggcttacttgtggtgctgaagttcagaaacttt 1097 ||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| Sbjct: 4321 caaatatgggtcgtggaattgtgagccggcttgctgttggtgctgaagttcagaaacttt 4262 Query: 1098 gtgct 1102 ||||| Sbjct: 4261 gtgct 4257 Score = 143 bits (72), Expect = 4e-30 Identities = 144/168 (85%) Strand = Plus / Minus Query: 1518 tagaccaaaataacaggagcccaaagacaaatagtggtggtcaatctgatcgttcttcag 1577 |||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 3776 tagaccaaaacaatgggagcccaaaggcaaacagtggtggtcagtctgatccttcttcag 3717 Query: 1578 agggtgttgactcaaacaataatgcaacagtgtatactgatcttaacaagtcacctgaaa 1637 | ||||| |||||||| ||||| | | |||||| ||||||| || || ||||| |||| Sbjct: 3716 aaggtgtggactcaaataataacactgcggtgtatgctgatctcaataaatcaccagaaa 3657 Query: 1638 gtgattttgaggactgtgaaaatcctgagatccttgattcagacaaag 1685 |||||||||| | ||||||||||||||||| |||||||||||||||| Sbjct: 3656 gtgattttgaatattgtgaaaatcctgagatacttgattcagacaaag 3609 Score = 73.8 bits (37), Expect = 3e-09 Identities = 59/66 (89%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 2457 ttggtcccattctttggtagctgatcgatcgttgcattgattcttcattggagatttcat 2516 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 2837 ttggtcccattctttcgtagc----agatcgttgcattgattcttcattggaaatttcat 2782 Query: 2517 tgaagc 2522 |||||| Sbjct: 2781 tgaagc 2776
>emb|AJ407149.1|PTR407149 Populus tremula x Populus tremuloides/Amanita muscaria mixed EST library EST clone 0004 Length = 515 Score = 46.1 bits (23), Expect = 0.65 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2165 aaggtggtgaggtggctggagac 2187 ||||||||||||||||||||||| Sbjct: 132 aaggtggtgaggtggctggagac 110
>emb|CR450832.12| Zebrafish DNA sequence from clone CH211-278F9 in linkage group 23, complete sequence Length = 161267 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 28028 taaccttgtctgtctgtctgtc 28049
>ref|XM_980636.1| PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 1b (LOC243628), mRNA Length = 2565 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1983 tggaaactggtaaggagactgg 2004 |||||||||||||||||||||| Sbjct: 585 tggaaactggtaaggagactgg 564
>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence Length = 196427 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 185869 taaccttgtctgtctgtctgtc 185848
>gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, complete sequence Length = 172076 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 78835 taaccttgtctgtctgtctgtc 78856
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2374 cccctctggcttctgcatgaac 2395 |||||||||||||||||||||| Sbjct: 203481 cccctctggcttctgcatgaac 203460
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 34289 taaccttgtctgtctgtctgtc 34310
>gb|AC121775.3| Mus musculus BAC clone RP23-356B13 from chromosome 6, complete sequence Length = 188443 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1983 tggaaactggtaaggagactgg 2004 |||||||||||||||||||||| Sbjct: 33844 tggaaactggtaaggagactgg 33865
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 7362 taaccttgtctgtctgtctgtc 7341
>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland Research Institute) complete sequence Length = 247105 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gtgaattatcaaagaggccaca 258 |||||||||||||||||||||| Sbjct: 181736 gtgaattatcaaagaggccaca 181757
>gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete sequence Length = 129948 Score = 44.1 bits (22), Expect = 2.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 724 ttcttgcgggttatcatgccatcttgagtgtgct 757 ||||||||| || |||||||| |||||||||||| Sbjct: 26413 ttcttgcggcttgtcatgccaccttgagtgtgct 26446
>gb|AC157802.8| Mus musculus chromosome 1, clone RP24-297D18, complete sequence Length = 154309 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2374 cccctctggcttctgcatgaacctgt 2399 ||||||||||||||||| |||||||| Sbjct: 126708 cccctctggcttctgcaggaacctgt 126733
>gb|AC095031.2| Homo sapiens chromosome 1 clone RP11-14P1, complete sequence Length = 165165 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1469 ctgaaagaaaatgacctgaagg 1490 |||||||||||||||||||||| Sbjct: 122259 ctgaaagaaaatgacctgaagg 122280
>gb|AC093786.3| Homo sapiens BAC clone RP11-213A7 from 4, complete sequence Length = 175571 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 125579 taaccttgtctgtctgtctgtc 125600
>gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, complete sequence Length = 177160 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1078 tgctgaagttcagaaactttgt 1099 |||||||||||||||||||||| Sbjct: 23386 tgctgaagttcagaaactttgt 23365
>gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome 7, complete sequence Length = 154177 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 60615 taaccttgtctgtctgtctgtc 60636
>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence Length = 202301 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2374 cccctctggcttctgcatgaac 2395 |||||||||||||||||||||| Sbjct: 9029 cccctctggcttctgcatgaac 9008
>gb|AC008513.7|AC008513 Homo sapiens chromosome 5 clone CTC-455C23, complete sequence Length = 224058 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 606 ttaacctggaagataaattttg 627 |||||||||||||||||||||| Sbjct: 210424 ttaacctggaagataaattttg 210403
>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence Length = 161015 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1938 ttcctcgatttgttggctctat 1959 |||||||||||||||||||||| Sbjct: 10969 ttcctcgatttgttggctctat 10948
>emb|BX826767.1|CNS0A2GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2589 Score = 44.1 bits (22), Expect = 2.6 Identities = 49/58 (84%) Strand = Plus / Plus Query: 623 ttttgcagacgctgttcatgctgtatatgtttcaagtatgatgataacaaggacccta 680 ||||||||| | |||||||| || || ||| ||||||||||||||||| ||||||| Sbjct: 753 ttttgcagaaggtgttcatgttgcatctgtcgtaagtatgatgataacaaagacccta 810
>ref|XM_144968.5| PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 1b (LOC243628), mRNA Length = 2565 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1983 tggaaactggtaaggagactgg 2004 |||||||||||||||||||||| Sbjct: 585 tggaaactggtaaggagactgg 564
>ref|XM_917622.1| PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 1b (LOC243628), mRNA Length = 2565 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1983 tggaaactggtaaggagactgg 2004 |||||||||||||||||||||| Sbjct: 585 tggaaactggtaaggagactgg 564
>gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-218N2, complete sequence Length = 201728 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 122578 taaccttgtctgtctgtctgtc 122599
>dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693I21, complete sequence Length = 145782 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 603 ttcttaacctggaagataaatt 624 |||||||||||||||||||||| Sbjct: 139571 ttcttaacctggaagataaatt 139592
>dbj|AP002814.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-882G5, complete sequence Length = 167198 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 603 ttcttaacctggaagataaatt 624 |||||||||||||||||||||| Sbjct: 56050 ttcttaacctggaagataaatt 56071
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1983 tggaaactggtaaggagactgg 2004 |||||||||||||||||||||| Sbjct: 115657 tggaaactggtaaggagactgg 115678
>emb|AL831739.10| Mouse DNA sequence from clone RP23-395O3 on chromosome 4, complete sequence Length = 121869 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 tcccgctctccctccctctctc 149 |||||||||||||||||||||| Sbjct: 32279 tcccgctctccctccctctctc 32258
>gb|AC158169.2| Mus musculus BAC clone RP23-210A16 from chromosome 5, complete sequence Length = 223006 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1938 ttcctcgatttgttggctctat 1959 |||||||||||||||||||||| Sbjct: 170198 ttcctcgatttgttggctctat 170177
>gb|AC120370.9| Mus musculus chromosome 1, clone RP24-441N3, complete sequence Length = 163929 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2374 cccctctggcttctgcatgaacctgt 2399 ||||||||||||||||| |||||||| Sbjct: 74866 cccctctggcttctgcaggaacctgt 74841
>emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on chromosome 11, complete sequence Length = 155262 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2557 taaccttgtctgtctgtctgtc 2578 |||||||||||||||||||||| Sbjct: 113988 taaccttgtctgtctgtctgtc 114009 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 448,964,358 Number of extensions: 24029062 Number of successful extensions: 332807 Number of sequences better than 10.0: 37 Number of HSP's gapped: 332790 Number of HSP's successfully gapped: 79 Length of query: 2637 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2614 Effective length of database: 18,503,978,556 Effective search space: 48369399945384 Effective search space used: 48369399945384 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
