ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf46h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0122500:Os02g0122500 289 2e-78
2Os12g0479100:Os12g0479100 30 3.6
3Os09g0532500:Os09g0532500 29 6.1
4Os08g0367000:Os08g0367000 29 6.1
5Os09g0532800:Os09g0532800 28 8.0
6AY224503:Os07g0673400 28 8.0
7AK111451:Os04g0154800 28 8.0

>Os02g0122500:Os02g0122500 |
          Length = 279
 Score =  289 bits (740), Expect = 2e-78
 Identities = 146/208 (70%), Positives = 154/208 (74%), Gaps = 3/208 (1%)
 Frame = +3

Query: 246 GGELGIIEGRTVALLHPAIMGGLFAYTLWAGYLGWQWRRVRTVQDEITELKKQVRXXXXX 425
           GGE GI+EGR+VALLHP +MGGLFAYTLWAGYLGWQWRRVRT+QDEI ELKKQ++     
Sbjct: 72  GGEFGILEGRSVALLHPLVMGGLFAYTLWAGYLGWQWRRVRTIQDEINELKKQLKPAAAA 131

Query: 426 XXXXXXXXXXXXXXXXXXXX---KSPTEIKIDELSEERKKLVKGGFRDRHFNAGSILLGL 596
                                  KSP EIKIDEL+EERKKL+KG FRDRHFNAGSILLGL
Sbjct: 132 ATPAAVAAGDSSSSSSSPPPSAPKSPVEIKIDELTEERKKLIKGSFRDRHFNAGSILLGL 191

Query: 597 GVTESVGGALNTWLRTGKLFPGPHLFXXXXXXXXXXXXXXXXXXMQKGNETARSLHIALN 776
           GVTESVGGALNTW RTGKLFPGPHLF                  MQKGNETARSLHIALN
Sbjct: 192 GVTESVGGALNTWFRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGNETARSLHIALN 251

Query: 777 TINVLLFIWQIPTGLEIVGKVFEFTNWP 860
            INVLLFIWQIPTGLEIVGKVFEFT WP
Sbjct: 252 AINVLLFIWQIPTGLEIVGKVFEFTTWP 279



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>Os12g0479100:Os12g0479100 |
          Length = 243

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 557 GPALQRGVDPAGPGRDGVRRRRAQHMAPHRQALPGPA 667
           G +LQ G+ P+ PG     RR+      H +A  GP+
Sbjct: 124 GLSLQLGLGPSAPGSPSSSRRKRPRTDAHHEAAAGPS 160



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>Os09g0532500:Os09g0532500 |
          Length = 362

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 658 GKSLPVRSHVLSAPPTDSVTPRPSRIDPA 572
           G  LPVR+H ++A P     P P  I PA
Sbjct: 18  GSHLPVRAHAITAAPMLPSPPAPPPISPA 46



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>Os08g0367000:Os08g0367000 |
          Length = 2245

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 810  PTGLEIVGKVFEFTNWP*APPPTGGAVCFVSL 905
            P  L ++G V+ FT+ P  PPPTG + C   L
Sbjct: 2039 PIMLPLLG-VYVFTDRPPRPPPTGASACTAGL 2069



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>Os09g0532800:Os09g0532800 |
          Length = 422

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 658 GKSLPVRSHVLSAPPTDSVTPRPSRIDPA 572
           G  LPVR+H ++A P     P P  I PA
Sbjct: 39  GPRLPVRAHAITASPMLPSPPAPPPISPA 67



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>AY224503:Os07g0673400 |
          Length = 173

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +2

Query: 566 LQRGVDPAGPG--RDGVRRRRAQHMAPHRQAL 655
           L+ GVD A PG    G RRRRA+H    RQAL
Sbjct: 24  LRAGVDDAAPGERHGGQRRRRARHRP--RQAL 53



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>AK111451:Os04g0154800 |
          Length = 714

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 510 DELSEERKKLVKGGFRDRHFNAGSILLGLGVTESVGGALNTWLR 641
           + L    +K   G + +RH NAGSI++   V E V G +   LR
Sbjct: 389 ERLGAAAEKAGLGSWWNRHVNAGSIVISDEVKELVFGHIQNMLR 432


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,078,185
Number of extensions: 328569
Number of successful extensions: 1627
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1625
Number of HSP's successfully gapped: 7
Length of query: 340
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 239
Effective length of database: 11,355,714
Effective search space: 2714015646
Effective search space used: 2714015646
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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