>Q9UPA5:BSN_HUMAN Protein bassoon - Homo sapiens (Human)|
          Length = 3926
 Score = 34.3 bits (77), Expect = 0.84
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
 Frame = +2

Query: 554  PGPALQRGVDPAGP-------GRDGVRRRRAQHMAPHRQALPGPAP 670
            PGP+   G  PAGP       G  G  +   Q  AP  Q  PGP P
Sbjct: 3823 PGPSTATGPQPAGPPRAEQTNGSKGTAKAPQQGRAPQAQPTPGPGP 3868

>P25059:POL_BLVAU Pol polyprotein [Contains: Reverse transcriptase/ribonuclease H -|
           Bovine leukemia virus (isolate Australian) (BLV)
          Length = 852

 Score = 32.7 bits (73), Expect = 2.4
 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = -3

Query: 997 TKKQTLRIRLLFTRNIKTCNFKVS*RSSYEQRETKQTAPPVGGGAHGQLVNSKTLPT--I 824
           T++Q L+       +++   F+V+   S + R+T    P +G   H ++V  ++LPT  I
Sbjct: 171 TEEQRLQCYQTMAAHLRDLGFQVA---SEKTRQTPSPVPFLGQMVHERMVTYQSLPTLQI 227

Query: 823 SSPVGICQMKS 791
           SSP+ + Q+++
Sbjct: 228 SSPISLHQLQT 238

>P92208:JNK_DROME Stress-activated protein kinase JNK - Drosophila melanogaster|
           (Fruit fly)
          Length = 372

 Score = 31.6 bits (70), Expect = 5.4
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +3

Query: 561 RHFNAGSILLGLGVTE-----SVGGALNTWLRTGKLFPG 662
           R++ A  ++LG+G TE     SVG  +   +R G LFPG
Sbjct: 187 RYYRAPEVILGMGYTENVDIWSVGCIMGEMIRGGVLFPG 225

>Q5UQV1:YR354_MIMIV Uncharacterized protein R354 - Mimivirus|
          Length = 549

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -3

Query: 868 GAHGQLVNSKTLPTISSPVGICQMKSSTLMVLSAMCRLLAVSFPF 734
           G +G L +S      +SP GIC  K++T  +   + RLL + FPF
Sbjct: 254 GEYGLLQHSGHKFIAASPDGICSKKANTGGLSKLVGRLLEIKFPF 298


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 103,695,923
Number of extensions: 1775447
Number of successful extensions: 6270
Number of sequences better than 10.0: 4
Number of HSP's gapped: 6266
Number of HSP's successfully gapped: 4
Length of query: 340
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 226
Effective length of database: 69,416,809
Effective search space: 15688198834
Effective search space used: 15688198834
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)