ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf5h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g33900:12005.t02985:unspliced-genomic nodulin-like p... 29 0.089
2LOC_Os04g02240:12004.t00119:unspliced-genomic retrotransposo... 38 0.34
3LOC_Os08g29124:12008.t02667:unspliced-genomic expressed protein 30 0.47
4LOC_Os08g04920:12008.t00386:unspliced-genomic expressed protein 37 0.64
5LOC_Os09g11680:12009.t00957:unspliced-genomic retrotransposo... 36 0.88
6LOC_Os12g25760:12012.t02294:unspliced-genomic hypothetical p... 36 1.2
7LOC_Os11g27870:12011.t02401:unspliced-genomic retrotransposo... 36 1.2
8LOC_Os06g43120:12006.t04002:unspliced-genomic zinc finger C-... 36 1.2
9LOC_Os08g20480:12008.t01865:unspliced-genomic F-box domain c... 36 1.2
10LOC_Os04g32250:12004.t02904:unspliced-genomic conserved hypo... 27 1.3
11LOC_Os01g44110:12001.t03922:unspliced-genomic BRASSINOSTEROI... 29 1.6
12LOC_Os05g24070:12005.t02064:unspliced-genomic retrotransposo... 35 1.7
13LOC_Os04g32260:12004.t02905:unspliced-genomic conserved hypo... 26 1.7
14LOC_Os10g25200:12010.t01942:unspliced-genomic expressed protein 28 2.1
15LOC_Os03g42820:12003.t03682:unspliced-genomic zinc ion bindi... 35 3.1
16LOC_Os01g68870:12001.t06242:unspliced-genomic leucine-rich r... 35 3.1
17LOC_Os03g05100:12003.t00383:unspliced-genomic hypothetical p... 35 3.2
18LOC_Os08g22100:12008.t01994:unspliced-genomic retrotransposo... 26 3.3
19LOC_Os12g35020:12012.t03190:unspliced-genomic hypothetical p... 27 3.9
20LOC_Os04g45750:12004.t04107:unspliced-genomic expressed protein 29 4.1
21LOC_Os11g45220:12011.t04050:unspliced-genomic IWS1-like prot... 34 4.3
22LOC_Os10g11530:12010.t00948:unspliced-genomic retrotransposo... 34 4.3
23LOC_Os08g17370:12008.t01607:unspliced-genomic transmembrane ... 34 4.3
24LOC_Os07g22220:12007.t01926:unspliced-genomic F-box-like/WD-... 34 4.3
25LOC_Os06g16630:12006.t01536:unspliced-genomic hypothetical p... 34 4.3
26LOC_Os05g35200:12005.t03113:unspliced-genomic secondary cell... 34 4.3
27LOC_Os09g13610:12009.t01150:unspliced-genomic PFT1, putative... 28 5.0
28LOC_Os06g16420:12006.t01515:unspliced-genomic amino acid tra... 34 5.9
29LOC_Os01g42270:12001.t03746:unspliced-genomic transcriptiona... 26 6.7
30LOC_Os01g57890:12001.t05190:unspliced-genomic ATML1, putativ... 30 7.0
31LOC_Os12g19530:12012.t01797:unspliced-genomic ATP binding pr... 33 8.2
32LOC_Os09g25250:12009.t02204:unspliced-genomic transposon pro... 33 8.2
33LOC_Os09g14390:12009.t01228:unspliced-genomic transposon pro... 33 8.2
34LOC_Os06g49790:12006.t04663:unspliced-genomic JD1, putative,... 33 8.2
35LOC_Os05g40040:12005.t03544:unspliced-genomic expressed protein 33 8.2
36LOC_Os02g49400:12002.t04524:unspliced-genomic transposon pro... 33 8.2
37LOC_Os12g01200:12012.t00019:unspliced-genomic transposon pro... 27 9.2

>LOC_Os05g33900:12005.t02985:unspliced-genomic nodulin-like protein, putative, expressed|
          Length = 2033
 Score = 29.0 bits (57), Expect(2) = 0.089
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1 / -2

                       
Query: 477 CSCCCCRGTAVV 442
           C CCCC  TA+V
Sbjct: 121 CCCCCCCATAIV 86



 Score = 28.1 bits (55), Expect(2) = 0.089
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1 / -2

                            
Query: 510 LYACVLLVDMACSCCCC 460
           L+ C+    +AC CCCC
Sbjct: 160 LHFCISDSPVACLCCCC 110



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>LOC_Os04g02240:12004.t00119:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2997

 Score = 37.7 bits (76), Expect = 0.34
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2 / +2

                                                                 
Query: 1562 KKKKALPSSTDDSNDADKKNWKKKRLFSIDEVTDLVAFVKQRSENQELTRDVN 1720
            +K+K   S  D S  A KK  KKK+    D++  L   ++Q  + +E+  DVN
Sbjct: 1859 RKRKTKASGVDPSALAPKKKTKKKKSKPADDLPTLDPSIEQALDEEEIEEDVN 2017



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>LOC_Os08g29124:12008.t02667:unspliced-genomic expressed protein|
          Length = 15769

 Score = 29.5 bits (58), Expect(2) = 0.47
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1 / -1

                                
Query: 507   YACVLLVDMACSCCCCRGT 451
             Y C+      C CCCC+ T
Sbjct: 10192 YCCICCWINCCCCCCCKTT 10136



 Score = 24.9 bits (48), Expect(2) = 0.47
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -1 / -1

                                  
Query: 471   CCCCRGTAVVDE*LCNTCGEC 409
             CCCC  +       C  CG C
Sbjct: 10105 CCCC*NSCCCCVMFCCCCGIC 10043



 Score = 29.9 bits (59), Expect(2) = 0.84
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -1 / -1

                                        
Query: 543  WIGLI*DGGMLLYACVLLVDMACSCCCC 460
            W G  * G     +C       C CCCC
Sbjct: 9811 WSGCC*TGSACCCSCSCCCCCCCCCCCC 9728



 Score = 23.5 bits (45), Expect(2) = 0.84
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1 / -1

                  
Query: 474  SCCCCR 457
            SCCCCR
Sbjct: 9634 SCCCCR 9617



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>LOC_Os08g04920:12008.t00386:unspliced-genomic expressed protein|
          Length = 6397

 Score = 36.8 bits (74), Expect = 0.64
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2 / -2

                                                        
Query: 2144 NFGEFAFLSNVNNSFPYMIHKYSYSFSYLLLVMHFQFLHPLHQS 2013
            N G+F F +  ++SF     K  ++ S LLL MHF F H ++ S
Sbjct: 3147 NKGKFVFATLRSHSFKIATLKT*FTLSLLLLAMHFNFCHTVNLS 3016



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>LOC_Os09g11680:12009.t00957:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4434

 Score = 36.3 bits (73), Expect = 0.88
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = -2 / -1

                                                           
Query: 1013 LVLYPCYQKN*YSYHILILVAAVVMIYHHSLC*YYFDLGEVGKMQAC 873
            L++ P   +N   +H+++   A++ +YH+ +C* + D+  +G    C
Sbjct: 4110 LIILPFLIRNRPQFHLVMESIALIFVYHNIMC*TFLDVHMIGS*NLC 3970



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>LOC_Os12g25760:12012.t02294:unspliced-genomic hypothetical protein|
          Length = 776

 Score = 35.9 bits (72), Expect = 1.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2 / -3

                                                                   
Query: 647 NHLSNHRNSPPVASFISRGQTFTQQENEANQFNNTTKTSNNHHQHVPTFPLHHHQH 814
           +H+ ++  +   +   S+ Q+  + E+  N   NTTK S  H     T    HH+H
Sbjct: 726 SHIQSNPKTKSQSQSQSQSQSKYKSESSQNPRENTTKRSQEHISSTTTITQEHHKH 559



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>LOC_Os11g27870:12011.t02401:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3041

 Score = 35.9 bits (72), Expect = 1.2
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2 / +3

                                                                   
Query: 1562 KKKKALPSSTDDSNDADKKNWKKKRLFSIDEVTDLVAFVKQRSENQELTRDVNYA 1726
            + +K   S+ D S  A KK  KKK+    D++  L   +KQ  + +E+  DV+ A
Sbjct: 1821 RTRKTKASAVDPSALAPKKKSKKKKTKPTDDLPALDPSIKQALDEEEIKEDVDQA 1985



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>LOC_Os06g43120:12006.t04002:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed|
          Length = 7923

 Score = 35.9 bits (72), Expect = 1.2
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2 / +1

                                                                  
Query: 650 HLSNHRNSPPVASFISRGQTFTQQENEANQFNNTTKTSNNHHQHVPTFPLHHHQH 814
           H S+H + PP  S  S G       +         ++ ++H  H+P    HHH H
Sbjct: 43  HYSDHHHFPPGGSGGSGGAASAAARSRYEYGGGGYESHSHHQYHLPDHHHHHHHH 207



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>LOC_Os08g20480:12008.t01865:unspliced-genomic F-box domain containing protein|
          Length = 8006

 Score = 35.9 bits (72), Expect = 1.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1 / +3

                                      
Query: 2139 WRICFSIECK*FFPLYDTQIFIFFFL 2062
            WR+   + CK FFPL+   I +FF+L
Sbjct: 3924 WRVLILLGCKYFFPLFLIMILLFFYL 4001



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>LOC_Os04g32250:12004.t02904:unspliced-genomic conserved hypothetical protein|
          Length = 3671

 Score = 27.2 bits (53), Expect(2) = 1.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1 / -2

                                        
Query: 477  CSCCCCRGTAVVDE*LCNTCGEC*VNSS 394
            C CC C  T+        TC +C  +S+
Sbjct: 3304 CCCCFCSATSCCCRTRARTCSDCRCSSA 3221



 Score = 25.8 bits (50), Expect(2) = 1.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1 / -2

                         
Query: 498  VLLVDMACSCCCC 460
            ++    AC CCCC
Sbjct: 3388 IICCSAACCCCCC 3350



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>LOC_Os01g44110:12001.t03922:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor, putative, expressed
          Length = 4933

 Score = 29.0 bits (57), Expect(2) = 1.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1 / -3

                               
Query: 519 GMLLYACVLLVDMACSCCCC 460
           G LL A V +    C CCCC
Sbjct: 251 GRLLDAAVKMAVALCCCCCC 192



 Score = 23.5 bits (45), Expect(2) = 1.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1 / -3

                   
Query: 477 CSCCCCRG 454
           C CC CRG
Sbjct: 203 CCCCSCRG 180



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>LOC_Os05g24070:12005.t02064:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2310

 Score = 35.4 bits (71), Expect = 1.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3 / -1

                                         
Query: 1362 LNPHHLHLTWMQPTCMHHDLLEVGVIQVV 1448
            L  HH  LT  Q TC+H D +++G I V+
Sbjct: 453  LRVHHPWLTKQQRTCLHRDKIKIGSIMVI 367



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>LOC_Os04g32260:12004.t02905:unspliced-genomic conserved hypothetical protein|
          Length = 3141

 Score = 26.3 bits (51), Expect(2) = 1.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1 / -2

                                
Query: 519  GMLLYACVLLVDMACSCCCC 460
            GM++  C    + A  CCCC
Sbjct: 2999 GMIVAGCWRCCNAAIICCCC 2940



 Score = 26.3 bits (51), Expect(2) = 1.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1 / -2

                                 
Query: 471  CCCCRGTAVVDE*LCNTCGEC 409
            CCCCR +A++    C     C
Sbjct: 2948 CCCCRCSAIICCCFCRATSCC 2886



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>LOC_Os10g25200:12010.t01942:unspliced-genomic expressed protein|
          Length = 7978

 Score = 27.6 bits (54), Expect(2) = 2.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1 / -2

                    
Query: 477  CSCCCCRG 454
            CSCCCC G
Sbjct: 7218 CSCCCCSG 7195



 Score = 24.4 bits (47), Expect(2) = 2.1
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -1 / -2

                                  
Query: 525  DGGMLLYACVLLVDMACSCCCC 460
            +G  +   C  +    C CCCC
Sbjct: 7344 NGEPICCCCC*ICCCCCCCCCC 7279



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>LOC_Os03g42820:12003.t03682:unspliced-genomic zinc ion binding protein, putative, expressed|
          Length = 6794

 Score = 34.5 bits (69), Expect = 3.1
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2 / +2

                                               
Query: 2081 YSYSFSYLLLVMHFQFLHPLHQSILS*ASLFSFPL 1977
            Y +SF  LLL +  Q  + L +S LS*   FSFPL
Sbjct: 5774 YYFSFFPLLLALIMQLAYQLRRSYLS*MHRFSFPL 5878



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>LOC_Os01g68870:12001.t06242:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,|
            expressed
          Length = 7255

 Score = 34.5 bits (69), Expect = 3.1
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +2 / -1

                                                                        
Query: 464  QQHEQAMSTNNTHAYKSMPPSYMSPIHDASSGGGLIATSTITTNYQNGSTTDSSHQTAPT 643
            ++H  ++ T  T    SMP   +SP   +S  G L  +S + +     +    S  T  T
Sbjct: 6985 REHYMSLETVTTRGPHSMPWVILSPFTTSSIVGLLNGSSAVQSRAMASTRAICSRHTLET 6806

                  
Query: 644  GNHLSN 661
            G H SN
Sbjct: 6805 GKHGSN 6788



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>LOC_Os03g05100:12003.t00383:unspliced-genomic hypothetical protein|
          Length = 819

 Score = 34.5 bits (69), Expect = 3.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1 / -2

                                                 
Query: 1845 EGSIVPSFEIKCLSNNCTYFFXXXXXXXLSSCNFSYS 1735
            +G I+  F   C +N+CT  F        S+CN S+S
Sbjct: 797  KGKIISEFSAGCSTNHCTICFFSLSRPTSSACNSSFS 687



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>LOC_Os08g22100:12008.t01994:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 1296

 Score = 25.8 bits (50), Expect(2) = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1 / -2

                           
Query: 504  ACVLLVDMACSCCCC 460
            AC  ++   C CCCC
Sbjct: 1178 ACCCILWCICWCCCC 1134



 Score = 25.8 bits (50), Expect(2) = 3.3
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1 / -2

                                         
Query: 477  CSCCCCRGTAVVDE*LCNTCGEC*VNSSC 391
            C C CC   A++  *   TC     + SC
Sbjct: 1142 CCCICCIMAAII*V*WAITCARVGFSGSC 1056



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>LOC_Os12g35020:12012.t03190:unspliced-genomic hypothetical protein|
          Length = 5707

 Score = 27.2 bits (53), Expect(2) = 3.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2 / -1

                                     
Query: 623  SHQTAPTGNHLSNHRNSPPVASFIS 697
            +HQT P+   ++ H+ SPP +   S
Sbjct: 3112 AHQTPPSSPRIAAHQTSPPSSRIAS 3038



 Score = 24.0 bits (46), Expect(2) = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1 / -3

                                
Query: 748  HNKNIQQPPPTRSYFSIASS 807
            HN ++  PPP R  +S   S
Sbjct: 2927 HNDDVVTPPPNRLIYSFPHS 2868



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>LOC_Os04g45750:12004.t04107:unspliced-genomic expressed protein|
          Length = 3229

 Score = 28.6 bits (56), Expect(2) = 4.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1 / -1

                             
Query: 477 CSCCCCRGTAVVDE*LCN 424
           C CCCC G  V     CN
Sbjct: 787 CCCCCCCGWGVCGAAACN 734



 Score = 22.6 bits (43), Expect(2) = 4.1
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1 / -1

                                
Query: 522 GGMLLYACVLLVDMACSCCCC 460
           G     A  LLV     CCCC
Sbjct: 835 GAKACIAGALLVTGGNCCCCC 773



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>LOC_Os11g45220:12011.t04050:unspliced-genomic IWS1-like protein A, putative, expressed|
          Length = 1579

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2 / +3

                                                    
Query: 1544 EQPAKIKKKKALPSSTDDSNDADKKNWKKKRLFSIDEVTD 1663
            E+  K KKKK+   S+DD +D  +K  KKK   S D+  D
Sbjct: 429  EKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDD 548



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>LOC_Os10g11530:12010.t00948:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2222

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2 / +1

                                                            
Query: 335  PSPTSSADRISNTASLSKLQEEFTQHSPHVLQSYSSTTAVPLQQQHEQ 478
            P+P  + +  +  A  S   EE  Q    VLQ Y  T  +PL Q++++
Sbjct: 1243 PNPAGTGNNSNREAPSSDTTEEEVQSKKTVLQEYCDTRPLPLPQRYKK 1386



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>LOC_Os08g17370:12008.t01607:unspliced-genomic transmembrane 9 superfamily protein member 2 precursor, putative,|
            expressed
          Length = 3700

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3 / +2

                                
Query: 1116 HIVTPVSLHLLVVILMVTCA 1175
            H+  PV LHL V+IL++TCA
Sbjct: 2954 HLAAPVLLHLWVLILVITCA 3013



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>LOC_Os07g22220:12007.t01926:unspliced-genomic F-box-like/WD-repeat-containing protein TBL1XR1-A, putative,|
            expressed
          Length = 16427

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3 / +3

                                       
Query: 1054 *IFIMHGGCIGLRNWSCTHVIKRISIH 974
            *  ++HG CI   NW   H ++R+ +H
Sbjct: 7128 *FIVLHGNCIRFANWEVLHSLERLIMH 7208



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>LOC_Os06g16630:12006.t01536:unspliced-genomic hypothetical protein|
          Length = 800

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1 / -3

                              
Query: 516 MLLYACVLLVDMACSCCCC 460
           ML  +CV L D  C CCCC
Sbjct: 357 MLTGSCVALEDSGCYCCCC 301



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>LOC_Os05g35200:12005.t03113:unspliced-genomic secondary cell wall-related glycosyltransferase family 8, putative,|
           expressed
          Length = 5336

 Score = 34.1 bits (68), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1 / +2

                           
Query: 504 ACVLLVDMACSCCCCR 457
           AC+  + + CSCCCCR
Sbjct: 764 ACMFYMTLPCSCCCCR 811



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>LOC_Os09g13610:12009.t01150:unspliced-genomic PFT1, putative, expressed|
          Length = 11323

 Score = 27.6 bits (54), Expect(2) = 5.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1 / -2

                           
Query: 501   CVLLVDMACSCCCC 460
             CV      CSCCCC
Sbjct: 10536 CVCSCMCCCSCCCC 10495



 Score = 23.1 bits (44), Expect(2) = 5.0
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -1 / -2

                                
Query: 471   CCCCRGTAVVDE*LCNTCG 415
             CCCC     +      TCG
Sbjct: 10401 CCCCNCCCCIGGCWVGTCG 10345



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>LOC_Os06g16420:12006.t01515:unspliced-genomic amino acid transporter-like protein, putative, expressed|
          Length = 2994

 Score = 33.6 bits (67), Expect = 5.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2 / +1

                           
Query: 1361 SCYCYYYLKTCRCDV 1317
            SC+CYYY + C C V
Sbjct: 1423 SCFCYYYCRNCYCQV 1467



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>LOC_Os01g42270:12001.t03746:unspliced-genomic transcriptional corepressor LEUNIG, putative|
          Length = 10145

 Score = 26.3 bits (51), Expect(2) = 6.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1 / -1

                                
Query: 477  CSCCCCRGTAVVDE*LCNTC 418
            C CCCC   A +   +C  C
Sbjct: 2663 CCCCCCCCCAALCNNICCIC 2604



 Score = 24.0 bits (46), Expect(2) = 6.7
 Identities = 7/18 (38%), Positives = 7/18 (38%)
 Frame = -1 / -1

                              
Query: 513  LLYACVLLVDMACSCCCC 460
            L   C       C CCCC
Sbjct: 2693 LCSCCCCCCCCCCCCCCC 2640



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>LOC_Os01g57890:12001.t05190:unspliced-genomic ATML1, putative, expressed|
          Length = 6636

 Score = 30.4 bits (60), Expect(2) = 7.0
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2 / +3

                                                    
Query: 2093 YKGKNYLHSIEKQILQNSDSIHNYFNQLAISSLCCNSNTE 2212
            +K +NY  S+E +IL++ +      +  A+   CCNS+ +
Sbjct: 3372 WKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQ 3491



 Score = 27.2 bits (53), Expect(2) = 7.0
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3 / +2

                                                         
Query: 1767 EQVFIERNMYNYSKGI*FQKMVLLILPYSKNMIKEHLPLLNLKDH 1901
            + + I R++Y+Y+    F  ++L ILP+     K  +PL  LK++
Sbjct: 1136 QTIIIHRHLYSYNFFFSFLYILLSILPFFFFTRKVSIPLDCLKNN 1270



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>LOC_Os12g19530:12012.t01797:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 7429

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3 / +1

                                                                 
Query: 1269 TLQIIMSLLLRTLTKLHITSTCFQIIITIA*LNPHHLHLTWMQPTCMHHDLLE 1427
            T+  ++++LL T  K+HIT   FQI + +  +  H L +      C++ ++ E
Sbjct: 4531 TISCVITILLFTEIKMHITFQWFQINLAVGFMKHHILVILHYS*PCLYFNI*E 4689



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>LOC_Os09g25250:12009.t02204:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed|
          Length = 3095

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2 / +3

                                                       
Query: 1514 HHNDSTVYSFEQPAKIKKKKALPSSTDDSNDADKKNWKKKRLF 1642
            H N  TV++  +  K+   K L S   +S D     WKK  +F
Sbjct: 1275 HRNGKTVFAMVKDLKVVFGKGLGSQPIESEDGHAAMWKKNSIF 1403



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>LOC_Os09g14390:12009.t01228:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 2399

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2 / +3

                                                       
Query: 1514 HHNDSTVYSFEQPAKIKKKKALPSSTDDSNDADKKNWKKKRLF 1642
            HHN  TV++  +  K+   K   S   +S D     WKK  +F
Sbjct: 1275 HHNGKTVFAMVKDLKVVILKGPGSQPIESEDGHAAMWKKNYIF 1403



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>LOC_Os06g49790:12006.t04663:unspliced-genomic JD1, putative, expressed|
          Length = 5196

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 20/76 (26%), Positives = 29/76 (38%)
 Frame = +2 / -2

                                                                       
Query: 329 SVPSPTSSADRISNTASLSKLQEEFTQHSPHVLQSYSSTTAVPLQQQHEQAMSTNNTHAY 508
           ++ SP S++   +  A  S L   +  H P V     S    P    H    S  N +  
Sbjct: 431 AMESPNSTSLAAATGAHTSALTSSYAPHHPGVPLRNGSAGDTPRGDHHAGRSSDRNANGS 252

                           
Query: 509 KSMPPSYMSPIHDASS 556
              PPS    + D+SS
Sbjct: 251 PPPPPSPPHTVGDSSS 204



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>LOC_Os05g40040:12005.t03544:unspliced-genomic expressed protein|
          Length = 5177

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2 / +3

                                                              
Query: 554 SGGGLIATSTITTNYQNGSTTDSSHQTAPTGNHLSNHRNSPPVASFISRGQ 706
           + GG    S  ++N QN  T ++ HQT P      +    PP A   S+GQ
Sbjct: 594 AAGGSHKESAKSSNGQNPVTKETHHQTPPPAKPPKDQTPPPPPAVSESKGQ 746



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>LOC_Os02g49400:12002.t04524:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 7050

 Score = 33.1 bits (66), Expect = 8.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2 / +3

                                                       
Query: 1514 HHNDSTVYSFEQPAKIKKKKALPSSTDDSNDADKKNWKKKRLF 1642
            HH+  TV++  +  K+   K L S   +S D     WK+  +F
Sbjct: 1440 HHSGKTVFAMVKDLKVVFGKGLGSQPIESEDGHAAMWKRNSIF 1568



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>LOC_Os12g01200:12012.t00019:unspliced-genomic transposon protein, putative, unclassified, expressed|
          Length = 8064

 Score = 26.7 bits (52), Expect(2) = 9.2
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1 / -2

                                
Query: 471 CCCCRGTAVVDE*LCNTCGEC 409
           CCC    +V    +C TC  C
Sbjct: 419 CCCIIHVSVTLSLICGTCASC 357



 Score = 23.1 bits (44), Expect(2) = 9.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1 / -3

                     
Query: 489 VDMACSCCCC 460
           VD   +CCCC
Sbjct: 454 VDQYTTCCCC 425


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 825,203,640
Number of extensions: 12278655
Number of successful extensions: 48459
Number of sequences better than 10.0: 37
Length of query: 787
Length of database: 55,613,886
Length adjustment: 52
Effective length of query: 735
Effective length of database: 52,687,430
Effective search space: 38725261050
Effective search space used: 38725261050
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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