ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf5h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164550 Score = 58.0 bits (29), Expect = 2e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1831 tactattgatccttccttattccaagaatatga 1863 |||||||||||||||| |||||||||||||||| Sbjct: 132469 tactattgatccttccctattccaagaatatga 132501
>emb|AL355073.5|CNS05TC7 Human chromosome 14 DNA sequence BAC R-930O11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175988 Score = 58.0 bits (29), Expect = 2e-04 Identities = 32/33 (96%) Strand = Plus / Minus Query: 1831 tactattgatccttccttattccaagaatatga 1863 |||||||||||||||| |||||||||||||||| Sbjct: 82436 tactattgatccttccctattccaagaatatga 82404
>gb|AC087687.5| Homo sapiens chromosome 18, clone RP11-729L2, complete sequence Length = 129152 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1985 aagaaaacaaagaagcttaagaaa 2008 |||||||||||||||||||||||| Sbjct: 95410 aagaaaacaaagaagcttaagaaa 95387
>gb|AC091551.14| Homo sapiens chromosome 18, clone RP11-729G3, complete sequence Length = 156211 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1985 aagaaaacaaagaagcttaagaaa 2008 |||||||||||||||||||||||| Sbjct: 21344 aagaaaacaaagaagcttaagaaa 21321
>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10, complete sequence Length = 151591 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1332 tgttttcaaataataataacaata 1355 |||||||||||||||||||||||| Sbjct: 139259 tgttttcaaataataataacaata 139236
>dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds Length = 160820 Score = 48.1 bits (24), Expect = 0.15 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1985 aagaaaacaaagaagcttaagaaa 2008 |||||||||||||||||||||||| Sbjct: 62595 aagaaaacaaagaagcttaagaaa 62572
>gb|AC189972.1| Gasterosteus aculeatus clone VMRC26-246B04, complete sequence Length = 162071 Score = 46.1 bits (23), Expect = 0.58 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ggttacagtttgtccttccctca 142 ||||||||||||||||||||||| Sbjct: 135582 ggttacagtttgtccttccctca 135604
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence Length = 198179 Score = 46.1 bits (23), Expect = 0.58 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaata 2075 ||||||||||||||| |||||||| |||||| Sbjct: 85666 gcatcaccaacagaatataagaaatagaata 85696
>emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in linkage group 4, complete sequence Length = 249278 Score = 46.1 bits (23), Expect = 0.58 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcatt 1476 ||||||||||||| ||||||||||||| Sbjct: 66334 taataataataattcatcatcatcatt 66360
>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23, complete sequence Length = 236136 Score = 46.1 bits (23), Expect = 0.58 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcatttaat 1480 ||||||||||||| ||||||||||||||||| Sbjct: 25716 taataataataat-catcatcatcatttaat 25745
>emb|BX004821.5| Zebrafish DNA sequence from clone CH211-171A11 in linkage group 19, complete sequence Length = 127311 Score = 46.1 bits (23), Expect = 0.58 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1453 taataataatgcatcatcatcat 1475 ||||||||||||||||||||||| Sbjct: 67293 taataataatgcatcatcatcat 67315
>emb|AL732520.14| Mouse DNA sequence from clone RP23-123E1 on chromosome 4, complete sequence Length = 167166 Score = 46.1 bits (23), Expect = 0.58 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1329 acatgttttcaaataataataacaata 1355 |||||||||||||||||||||| |||| Sbjct: 112584 acatgttttcaaataataataataata 112610
>dbj|AP000426.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1107E3 Length = 239116 Score = 46.1 bits (23), Expect = 0.58 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1605 atgcagataaaaagaattggaaa 1627 ||||||||||||||||||||||| Sbjct: 121466 atgcagataaaaagaattggaaa 121488
>gb|AC182699.2| Populus trichocarpa clone Pop1-72K24, complete sequence Length = 94946 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2257 tgaattcattcaaatcaattca 2278 |||||||||||||||||||||| Sbjct: 91926 tgaattcattcaaatcaattca 91905
>ref|XM_001134623.1| Dictyostelium discoideum AX4 hypothetical protein (DDB_0232398) mRNA, complete cds Length = 5730 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 ||||||||||||||||||||| |||| Sbjct: 2013 taataataataatgcatcatcgtcat 2038
>ref|XM_640244.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0168645) mRNA, complete cds Length = 3633 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 |||||||||||||| ||||||||||| Sbjct: 2298 taataataataatgtatcatcatcat 2323
>ref|XM_639827.1| Dictyostelium discoideum hypothetical protein (DDB0168939), partial mRNA Length = 5730 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 ||||||||||||||||||||| |||| Sbjct: 2013 taataataataatgcatcatcgtcat 2038
>gb|AC152566.1| Ornithorhynchus anatinus chromosome UNK clone OABb-111A1, complete sequence Length = 128808 Score = 44.1 bits (22), Expect = 2.3 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcatttaa 1479 ||||||||||||| |||||||||||||||| Sbjct: 55412 taataataataat-catcatcatcatttaa 55440
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete sequence Length = 125380 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 agtttgtccttccctcattgct 147 |||||||||||||||||||||| Sbjct: 124405 agtttgtccttccctcattgct 124384
>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence Length = 215238 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 ||||||||||||| |||||||||||| Sbjct: 73567 taataataataattcatcatcatcat 73592
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence Length = 159158 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 catgtccacactggaaaataca 298 |||||||||||||||||||||| Sbjct: 56854 catgtccacactggaaaataca 56875
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 agtttgtccttccctcattgct 147 |||||||||||||||||||||| Sbjct: 24268 agtttgtccttccctcattgct 24247
>gb|AC165160.3| Mus musculus BAC clone RP23-200E23 from chromosome 3, complete sequence Length = 183763 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2044 tgcatcaccaacagaagataagaaaaagaa 2073 |||||||||||||||| |||||| |||||| Sbjct: 39686 tgcatcaccaacagaatataagagaaagaa 39715
>gb|AC158935.4| Mus musculus chromosome 3, clone RP24-180K20, complete sequence Length = 157284 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1983 aaaagaaaacaaagaagcttaa 2004 |||||||||||||||||||||| Sbjct: 29041 aaaagaaaacaaagaagcttaa 29062
>gb|AC092888.4| Homo sapiens 12 BAC RP11-597C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169071 Score = 44.1 bits (22), Expect = 2.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1254 aacatgtgaatgattaccctccaaataatcatgt 1287 ||||| |||||||| |||||||||||||||||| Sbjct: 48405 aacatttgaatgatatccctccaaataatcatgt 48438
>gb|AC019270.12| Homo sapiens chromosome 8, clone RP11-10C8, complete sequence Length = 154957 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1329 acatgttttcaaataataataa 1350 |||||||||||||||||||||| Sbjct: 131720 acatgttttcaaataataataa 131699
>gb|AC090017.18| Homo sapiens 12q BAC RP11-471N19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196962 Score = 44.1 bits (22), Expect = 2.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1254 aacatgtgaatgattaccctccaaataatcatgt 1287 ||||| |||||||| |||||||||||||||||| Sbjct: 177107 aacatttgaatgatatccctccaaataatcatgt 177140
>gb|AC093561.2| Homo sapiens chromosome 1 clone RP11-401A10, complete sequence Length = 184330 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1980 aggaaaagaaaacaaagaagct 2001 |||||||||||||||||||||| Sbjct: 178607 aggaaaagaaaacaaagaagct 178628
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 agtttgtccttccctcattgct 147 |||||||||||||||||||||| Sbjct: 26074961 agtttgtccttccctcattgct 26074982
>emb|Z99495.1|HS441J1 Human DNA sequence from clone RP3-441J1 on chromosome 6p24 Contains the 5' end of gene KIAA1733, complete sequence Length = 151213 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1079 gatcctcctacttcaacctcac 1100 |||||||||||||||||||||| Sbjct: 63385 gatcctcctacttcaacctcac 63364
>emb|AL450325.5| Human DNA sequence from clone RP11-17F15 on chromosome 6 Contains the 5' end of the TReP-132 gene for zinc finger transcription protein, complete sequence Length = 88119 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gagaaaaagaaaatcataaaca 181 |||||||||||||||||||||| Sbjct: 65358 gagaaaaagaaaatcataaaca 65379
>emb|AL392183.18| Human DNA sequence from clone RP11-284J1 on chromosome 6, complete sequence Length = 67175 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1974 ttgaagaggaaaagaaaacaaa 1995 |||||||||||||||||||||| Sbjct: 25959 ttgaagaggaaaagaaaacaaa 25938
>gb|AC022844.8| Homo sapiens chromosome 8, clone RP11-250P18, complete sequence Length = 171732 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1329 acatgttttcaaataataataa 1350 |||||||||||||||||||||| Sbjct: 108446 acatgttttcaaataataataa 108467
>emb|AL136136.7| Human DNA sequence from clone RP11-141E20 on chromosome 1q31.2-31.3 Contains GSSs and STSs, complete sequence Length = 146158 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1980 aggaaaagaaaacaaagaagct 2001 |||||||||||||||||||||| Sbjct: 37723 aggaaaagaaaacaaagaagct 37744
>gb|AC116173.3| Homo sapiens BAC clone RP11-68E11 from 4, complete sequence Length = 10877 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 catacatatatattgtcatcatcatg 280 |||||||||||||| ||||||||||| Sbjct: 7269 catacatatatattttcatcatcatg 7244
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 ||||||||||||||||||||| |||| Sbjct: 175060 taataataataatgcatcatcgtcat 175085
>gb|AC115604.2| Dictyostelium discoideum chromosome 2 map 4354771-4414991 strain AX4, complete sequence Length = 60220 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatcat 1475 |||||||||||||| ||||||||||| Sbjct: 51881 taataataataatgtatcatcatcat 51906
>dbj|AP002058.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T1O13 Length = 71990 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1938 atgttgaagaggattctagttctgagggaagtaatgtt 1975 |||||||||||| |||||| ||||||| ||||||||| Sbjct: 68975 atgttgaagaggtttctagatctgaggctagtaatgtt 68938
>emb|AL592214.14| Mouse DNA sequence from clone RP23-212I24 on chromosome 1, complete sequence Length = 194720 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2043 atgcatcaccaacagaagataagaaa 2068 ||||||||||| |||||||||||||| Sbjct: 146528 atgcatcaccaccagaagataagaaa 146553
>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20, complete sequence Length = 165014 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1441 aagtggtcctaataataataat 1462 |||||||||||||||||||||| Sbjct: 112628 aagtggtcctaataataataat 112649
>gb|AC148186.3| Saimiri boliviensis boliviensis clone CH254-359M10, complete sequence Length = 189199 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1977 aagaggaaaagaaaacaaagaa 1998 |||||||||||||||||||||| Sbjct: 85177 aagaggaaaagaaaacaaagaa 85156
>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16, complete sequence Length = 166820 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1450 taataataataatgcatcatcatcat 1475 |||||||||||| ||||||||||||| Sbjct: 156930 taataataataaagcatcatcatcat 156905
>emb|AL626806.14| Mouse DNA sequence from clone RP23-146I18 on chromosome 4, complete sequence Length = 165969 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1329 acatgttttcaaataataataacaatagca 1358 |||| |||| |||||||||||||||||||| Sbjct: 133418 acatatttttaaataataataacaatagca 133389
>ref|XM_001026913.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00941530) mRNA, complete cds Length = 4533 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaat 2037 ||||||||||||||||||||| Sbjct: 3198 tgatgaagaggatgaagaaat 3218
>ref|XM_001013934.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00653820) mRNA, complete cds Length = 2241 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1340 aataataataacaatagcatg 1360 ||||||||||||||||||||| Sbjct: 760 aataataataacaatagcatg 780
>ref|NM_001053605.1| Oryza sativa (japonica cultivar-group) Os02g0542600 (Os02g0542600) mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 343 accatcaccaccatcatcagctgat 319
>ref|NM_001053604.1| Oryza sativa (japonica cultivar-group) Os02g0542500 (Os02g0542500) mRNA, complete cds Length = 1573 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 1133 accatcaccaccatcatcagctgat 1157
>ref|XM_510148.2| PREDICTED: Pan troglodytes dicer1, transcript variant 7 (DICER1), mRNA Length = 5859 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1543 tgatgatgaggatgaagaaattgaa 1567
>ref|XM_001154071.1| PREDICTED: Pan troglodytes dicer1, transcript variant 2 (DICER1), mRNA Length = 10700 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1543 tgatgatgaggatgaagaaattgaa 1567
>ref|XM_001154369.1| PREDICTED: Pan troglodytes dicer1, transcript variant 6 (DICER1), mRNA Length = 10330 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1543 tgatgatgaggatgaagaaattgaa 1567
>ref|XM_001154306.1| PREDICTED: Pan troglodytes dicer1, transcript variant 5 (DICER1), mRNA Length = 10289 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1502 tgatgatgaggatgaagaaattgaa 1526
>ref|XM_001154247.1| PREDICTED: Pan troglodytes dicer1, transcript variant 4 (DICER1), mRNA Length = 10286 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1499 tgatgatgaggatgaagaaattgaa 1523
>ref|XM_001154199.1| PREDICTED: Pan troglodytes dicer1, transcript variant 3 (DICER1), mRNA Length = 10395 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1608 tgatgatgaggatgaagaaattgaa 1632
>ref|XM_001154010.1| PREDICTED: Pan troglodytes dicer1, transcript variant 1 (DICER1), mRNA Length = 8828 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1543 tgatgatgaggatgaagaaattgaa 1567
>ref|XM_001163608.1| PREDICTED: Pan troglodytes hypothetical protein LOC742408, transcript variant 1 (LOC742408), mRNA Length = 5148 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1569 agaaagcccttccatcctcaa 1589 ||||||||||||||||||||| Sbjct: 446 agaaagcccttccatcctcaa 426
>gb|AC141862.54| Medicago truncatula chromosome 8 clone mth2-33n1, complete sequence Length = 116633 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 acctctacaacaacaacatga 474 ||||||||||||||||||||| Sbjct: 72999 acctctacaacaacaacatga 73019
>ref|XM_639577.2| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217202) mRNA, complete cds Length = 16806 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 10103 tttcaaataataataacaata 10123
>gb|CP000109.2| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2026 ggatgaagaaattgaaaatgc 2046 ||||||||||||||||||||| Sbjct: 2161620 ggatgaagaaattgaaaatgc 2161600
>ref|XM_001087999.1| PREDICTED: Macaca mulatta similar to ubiquitin specific protease 31 (LOC699540), mRNA Length = 8020 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1780 tagaaagaaatatgtacaatt 1800 ||||||||||||||||||||| Sbjct: 4194 tagaaagaaatatgtacaatt 4174
>ref|XM_001092851.1| PREDICTED: Macaca mulatta similar to cyclin fold protein 1 (LOC704495), mRNA Length = 1071 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1909 agatgttcaagaaaagagaaa 1929 ||||||||||||||||||||| Sbjct: 282 agatgttcaagaaaagagaaa 302
>ref|XM_001100868.1| PREDICTED: Macaca mulatta similar to dicer1 (LOC702516), mRNA Length = 10349 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1538 tgatgatgaggatgaagaaattgaa 1562
>emb|CR376794.21| Zebrafish DNA sequence from clone CH211-188F17 in linkage group 24, complete sequence Length = 139388 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 caataatacacatgcatataa 510 ||||||||||||||||||||| Sbjct: 46109 caataatacacatgcatataa 46089
>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete sequence Length = 220032 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 tttgtccttccctcattgcttgtta 152 ||||||||| ||||||||||||||| Sbjct: 23208 tttgtcctttcctcattgcttgtta 23184
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttattgcaaccagtactatta 587 ||||||||||||||||||||| Sbjct: 1960798 ttattgcaaccagtactatta 1960778
>ref|NM_118007.3| Arabidopsis thaliana nucleotide binding (AT4G18905) mRNA, complete cds Length = 1920 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 ||||||||||||||| ||||||||| Sbjct: 448 tgatgaagaggatgatgaaattgaa 472
>ref|XM_632462.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0187028) mRNA, complete cds Length = 1425 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1451 aataataataatgcatcatcatcat 1475 |||||||||||| |||||||||||| Sbjct: 508 aataataataattcatcatcatcat 532
>gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete sequence Length = 148291 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 757 aacatccaacaaccaccacca 777 ||||||||||||||||||||| Sbjct: 20674 aacatccaacaaccaccacca 20694
>ref|XM_640421.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0216921) mRNA, complete cds Length = 2562 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 1433 caaataataataacaatagca 1453
>ref|XM_639718.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217138) mRNA, complete cds Length = 3363 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 950 tttcaaataataataacaata 970
>ref|XM_639348.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0217237) mRNA, complete cds Length = 3363 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 950 tttcaaataataataacaata 970
>ref|XM_639490.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0203342) mRNA, complete cds Length = 16806 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 10103 tttcaaataataataacaata 10123
>ref|XM_636680.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218164) mRNA, complete cds Length = 6180 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1336 ttcaaataataataacaatag 1356 ||||||||||||||||||||| Sbjct: 1539 ttcaaataataataacaatag 1559
>ref|XM_636365.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0205926) mRNA, complete cds Length = 3315 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatca 1474 ||||||||||||| ||||||||||| Sbjct: 3045 taataataataattcatcatcatca 3069
>ref|XM_635887.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0215251) mRNA, complete cds Length = 3204 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1450 taataataataatgcatcatcatca 1474 ||||||||||||| ||||||||||| Sbjct: 2685 taataataataattcatcatcatca 2709
>ref|XM_629794.1| Dictyostelium discoideum AX4 SH3 domain-containing protein (docA) mRNA, complete cds Length = 6666 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 4619 caaataataataacaatagca 4639
>gb|AC102447.11| Mus musculus chromosome 7, clone RP24-206D20, complete sequence Length = 176911 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 51476 gcatcaccaacagaatataagaaatagaa 51448
>ref|NM_177438.1| Homo sapiens Dicer1, Dcr-1 homolog (Drosophila) (DICER1), transcript variant 1, mRNA Length = 10276 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1489 tgatgatgaggatgaagaaattgaa 1513
>gb|AC150424.3| Branchiostoma floridae clone CH302-7J16, complete sequence Length = 154657 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2321 agaataaactaaaattgtatt 2341 ||||||||||||||||||||| Sbjct: 70694 agaataaactaaaattgtatt 70714
>ref|NM_030621.2| Homo sapiens Dicer1, Dcr-1 homolog (Drosophila) (DICER1), transcript variant 2, mRNA Length = 10220 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1433 tgatgatgaggatgaagaaattgaa 1457
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10, complete sequence Length = 102692 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2021 gaagaggatgaagaaattgaa 2041 ||||||||||||||||||||| Sbjct: 9633 gaagaggatgaagaaattgaa 9613
>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM, complete sequence Length = 110469 Score = 42.1 bits (21), Expect = 9.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2058 aagataagaaaaagaatatgaatatttgtgtat 2090 |||||| ||| | |||||||||||||||||||| Sbjct: 101524 aagatatgaatatgaatatgaatatttgtgtat 101492
>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence Length = 134290 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 941 tcacaacagcagcaacaagga 961 ||||||||||||||||||||| Sbjct: 84008 tcacaacagcagcaacaagga 84028
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 141039 tttcaaataataataacaata 141019
>gb|AC162377.2| Mus musculus BAC clone RP24-511C17 from chromosome 13, complete sequence Length = 139617 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1967 agtaatgttgaagaggaaaagaaaacaaa 1995 |||||||| ||||||||||||||| |||| Sbjct: 79668 agtaatgtggaagaggaaaagaaatcaaa 79696
>gb|AY730337.1| Solanum tuberosum strain P6/210 clone BAC BA27c1, complete sequence Length = 91283 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2021 gaagaggatgaagaaattgaa 2041 ||||||||||||||||||||| Sbjct: 47259 gaagaggatgaagaaattgaa 47279
>gb|AC118747.5| Mus musculus chromosome 5, clone RP24-194J1, complete sequence Length = 166351 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1809 ggcatttgatttcaaaagatg 1829 ||||||||||||||||||||| Sbjct: 20608 ggcatttgatttcaaaagatg 20628
>gb|AC120553.9| Mus musculus chromosome 15, clone RP24-338L24, complete sequence Length = 152510 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1782 gaaagaaatatgtacaattat 1802 ||||||||||||||||||||| Sbjct: 27464 gaaagaaatatgtacaattat 27444
>gb|AC134847.3| Mus musculus BAC clone RP24-171M1 from chromosome 6, complete sequence Length = 142649 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||| |||||| Sbjct: 13892 gcatcaccaacagaatataagagaaagaa 13920
>ref|XM_709208.1| Candida albicans SC5314 hypothetical protein (CaO19.92), mRNA Length = 2691 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1613 aaaaagaattggaaaaagaag 1633 ||||||||||||||||||||| Sbjct: 1838 aaaaagaattggaaaaagaag 1858
>ref|XM_708932.1| Candida albicans SC5314 hypothetical protein (CaO19.7738), mRNA Length = 2691 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1613 aaaaagaattggaaaaagaag 1633 ||||||||||||||||||||| Sbjct: 1838 aaaaagaattggaaaaagaag 1858
>gb|AC162616.7| Mus musculus chromosome 5, clone RP23-260P17, complete sequence Length = 180400 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1809 ggcatttgatttcaaaagatg 1829 ||||||||||||||||||||| Sbjct: 157912 ggcatttgatttcaaaagatg 157932
>gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosome 3, complete sequence Length = 138218 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 85560 gcatcaccaacagaatataagaaatagaa 85532
>gb|AC132575.3| Mus musculus BAC clone RP24-425F2 from chromosome 16, complete sequence Length = 139828 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| | ||||||||||| Sbjct: 95227 gcatcaccaacagaatacaagaaaaagaa 95255
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 153036 caaataataataacaatagca 153016
>gb|AY448155.1| Cebus apella clone OLG_5 olfactory receptor-like protein gene, partial sequence Length = 642 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1553 gctaaaatcaaaaagaagaaa 1573 ||||||||||||||||||||| Sbjct: 135 gctaaaatcaaaaagaagaaa 115
>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence Length = 220629 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2059 agataagaaaaagaatatgaatatt 2083 ||||||||||||| ||||||||||| Sbjct: 34600 agataagaaaaaggatatgaatatt 34624
>gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome 14, complete sequence Length = 203640 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2059 agataagaaaaagaatatgaatatt 2083 ||||||||||||| ||||||||||| Sbjct: 116274 agataagaaaaaggatatgaatatt 116250
>gb|AC122490.3| Mus musculus BAC clone RP24-388D8 from chromosome 3, complete sequence Length = 140465 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1978 agaggaaaagaaaacaaagaa 1998 ||||||||||||||||||||| Sbjct: 104190 agaggaaaagaaaacaaagaa 104170
>ref|XM_863433.1| PREDICTED: Canis familiaris similar to dicer1, transcript variant 4 (LOC480426), mRNA Length = 5938 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1454 tgatgatgaggatgaagaaattgaa 1478
>ref|XM_537547.2| PREDICTED: Canis familiaris similar to dicer1, transcript variant 1 (LOC480426), mRNA Length = 7591 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1454 tgatgatgaggatgaagaaattgaa 1478
>gb|AC002040.1|HUAC002040 Homo sapiens Chromosome 16 BAC clone CIT987-SK142A6 complete genomic sequence, complete sequence Length = 128765 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1780 tagaaagaaatatgtacaatt 1800 ||||||||||||||||||||| Sbjct: 103510 tagaaagaaatatgtacaatt 103490
>gb|AC115631.4| Mus musculus BAC clone RP24-128K6 from 18, complete sequence Length = 179355 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1331 atgttttcaaataataataacaata 1355 ||||||||||||||||| ||||||| Sbjct: 57952 atgttttcaaataataaaaacaata 57928
>gb|AC158569.7| Mus musculus chromosome 7, clone RP24-65P20, complete sequence Length = 177045 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 75334 gcatcaccaacagaatataagaaatagaa 75362
>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence Length = 206016 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 182108 tttcaaataataataacaata 182128
>gb|AC115283.3| Homo sapiens chromosome 3 clone RP11-632K8, complete sequence Length = 193486 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1337 tcaaataataataacaatagc 1357 ||||||||||||||||||||| Sbjct: 7812 tcaaataataataacaatagc 7792
>gb|AC027740.11| Mus musculus, clone RP23-57M1, complete sequence Length = 261093 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1331 atgttttcaaataataataacaata 1355 ||||||||||||||||| ||||||| Sbjct: 47351 atgttttcaaataataaaaacaata 47327
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1340 aataataataacaatagcatg 1360 ||||||||||||||||||||| Sbjct: 39413 aataataataacaatagcatg 39433 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2010 aatactctgatgaagaggatgaaga 2034 |||||||||||||||| |||||||| Sbjct: 226205 aatactctgatgaagatgatgaaga 226181
>gb|AC099573.15| Mus musculus chromosome 7, clone RP23-28E6, complete sequence Length = 212811 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||| |||||| Sbjct: 126505 gcatcaccaacagaatataagagaaagaa 126533
>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence Length = 204130 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtccttccctcattgcttgtt 151 ||||||||||||||||||||| Sbjct: 95260 gtccttccctcattgcttgtt 95280
>gb|AY113942.1| Arabidopsis thaliana unknown protein (At4g18905) mRNA, complete cds Length = 1516 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 ||||||||||||||| ||||||||| Sbjct: 306 tgatgaagaggatgatgaaattgaa 330
>gb|AY050883.1| Arabidopsis thaliana unknown protein (At4g18905) mRNA, complete cds Length = 1806 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 ||||||||||||||| ||||||||| Sbjct: 361 tgatgaagaggatgatgaaattgaa 385
>gb|AC090363.16| Homo sapiens chromosome 18, clone RP11-885J19, complete sequence Length = 152200 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1339 aaataataataacaatagcat 1359 ||||||||||||||||||||| Sbjct: 51629 aaataataataacaatagcat 51609
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1782 gaaagaaatatgtacaattat 1802 ||||||||||||||||||||| Sbjct: 67880 gaaagaaatatgtacaattat 67900
>gb|AC116607.5| Homo sapiens chromosome 18, clone RP11-323P22, complete sequence Length = 179986 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1727 atatttaaggaatatgagaaa 1747 ||||||||||||||||||||| Sbjct: 103221 atatttaaggaatatgagaaa 103201
>dbj|AK158090.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930027O16 product:unclassifiable, full insert sequence Length = 3308 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 |||||||||||| || ||||||||||||| Sbjct: 419 gcatcaccaacaaaatataagaaaaagaa 391
>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2059 agataagaaaaagaatatgaatatt 2083 ||||||||||||| ||||||||||| Sbjct: 26623 agataagaaaaaggatatgaatatt 26647
>gb|AC103814.2| Homo sapiens chromosome 18, clone CTD-3111I19, complete sequence Length = 172461 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1339 aaataataataacaatagcat 1359 ||||||||||||||||||||| Sbjct: 87141 aaataataataacaatagcat 87121
>gb|AC098647.2| Homo sapiens chromosome 3 clone RP11-130G7, complete sequence Length = 159521 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1337 tcaaataataataacaatagc 1357 ||||||||||||||||||||| Sbjct: 129450 tcaaataataataacaatagc 129430
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1339 aaataataataacaatagcat 1359 ||||||||||||||||||||| Sbjct: 61490 aaataataataacaatagcat 61470
>emb|CR384074.11| Zebrafish DNA sequence from clone DKEY-229H19 in linkage group 24, complete sequence Length = 138451 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2014 ctctgatgaagaggatgaaga 2034 ||||||||||||||||||||| Sbjct: 49916 ctctgatgaagaggatgaaga 49896
>emb|CT010480.10| Mouse DNA sequence from clone RP23-313E11 on chromosome 13, complete sequence Length = 203636 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1967 agtaatgttgaagaggaaaagaaaacaaa 1995 |||||||| ||||||||||||||| |||| Sbjct: 162149 agtaatgtggaagaggaaaagaaatcaaa 162177
>gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, complete sequence Length = 163931 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1727 atatttaaggaatatgagaaa 1747 ||||||||||||||||||||| Sbjct: 26966 atatttaaggaatatgagaaa 26986
>emb|CR352265.10| Zebrafish DNA sequence from clone DKEY-33C18 in linkage group 24, complete sequence Length = 170032 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2014 ctctgatgaagaggatgaaga 2034 ||||||||||||||||||||| Sbjct: 76099 ctctgatgaagaggatgaaga 76119
>ref|XM_816625.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508873.460) partial mRNA Length = 1119 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2014 ctctgatgaagaggatgaaga 2034 ||||||||||||||||||||| Sbjct: 276 ctctgatgaagaggatgaaga 296
>gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, complete sequence Length = 212185 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1977 aagaggaaaagaaaacaaaga 1997 ||||||||||||||||||||| Sbjct: 35199 aagaggaaaagaaaacaaaga 35179
>gb|AC097637.2| Homo sapiens chromosome 3 clone RP11-330H6, complete sequence Length = 209252 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2157 ataattatttcaaccaattggcaat 2181 |||||||||||||||||||| |||| Sbjct: 131648 ataattatttcaaccaattgccaat 131672
>gb|AC078905.5| Homo sapiens chromosome 15, clone RP11-138H10, complete sequence Length = 169102 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1730 tttaaggaatatgagaaatta 1750 ||||||||||||||||||||| Sbjct: 36709 tttaaggaatatgagaaatta 36689
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1719 attatgcaatatttaaggaat 1739 ||||||||||||||||||||| Sbjct: 13128559 attatgcaatatttaaggaat 13128539
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 20173075 accatcaccaccatcatcagctgat 20173099
>ref|XM_691753.1| PREDICTED: Danio rerio similar to spermatogenesis associated 13 (LOC568426), mRNA Length = 4199 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2014 ctctgatgaagaggatgaaga 2034 ||||||||||||||||||||| Sbjct: 3670 ctctgatgaagaggatgaaga 3650
>emb|AL606537.10| Human DNA sequence from clone RP11-53A1 on chromosome 1 Contains the 3' end of the PROX1 gene for prospero-related homeobox protein 1, complete sequence Length = 116821 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1911 atgttcaagaaaagagaaaat 1931 ||||||||||||||||||||| Sbjct: 115451 atgttcaagaaaagagaaaat 115471
>emb|AL669876.7| Human DNA sequence from clone RP11-190L2 on chromosome X, complete sequence Length = 90143 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2309 cctgtaaaattgagaataaactaaa 2333 ||||||| ||||||||||||||||| Sbjct: 39191 cctgtaatattgagaataaactaaa 39167
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete sequence Length = 189385 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1911 atgttcaagaaaagagaaaat 1931 ||||||||||||||||||||| Sbjct: 630 atgttcaagaaaagagaaaat 650
>emb|AL590369.18| Human DNA sequence from clone RP11-483H20 on chromosome 9 Contains the 5' end of a novel gene (FLJ35803), the 3' end of the gene for AD-003 protein (AD-003), the ASB6 gene for ankyrin repeat and SOCS box-containing 6 (FLJ20548), two novel genes, the gene for paired related homeobox protein (PRX2) (PMX2, PRRX2), the 3' end of the PTGES gene for prostaglandin E synthase (PGES, PIG12, MGST-IV, MGST1L1, TP53I12, MGST1-L1) and six CpG islands, complete sequence Length = 125756 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1569 agaaagcccttccatcctcaa 1589 ||||||||||||||||||||| Sbjct: 25496 agaaagcccttccatcctcaa 25516
>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a novel gene similar to mouse 9130404H11Rik protein, the CER1 gene for cerberus 1 homolog, cysteine knot superfamily (Xenopus laevis) and the 3' end of a novel gene (FLJ25416), complete sequence Length = 143246 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1841 ccttccttattccaagaatat 1861 ||||||||||||||||||||| Sbjct: 81598 ccttccttattccaagaatat 81578
>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete sequence Length = 159229 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tgcatccttcatttccagagg 702 ||||||||||||||||||||| Sbjct: 24035 tgcatccttcatttccagagg 24015
>emb|AL358174.12| Human DNA sequence from clone RP11-387H19 on chromosome Xq27.1-28, complete sequence Length = 96743 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 tttgtccttccctcattgcttgtta 152 ||||||||| ||||||||||||||| Sbjct: 24145 tttgtcctttcctcattgcttgtta 24121
>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence Length = 165566 Score = 42.1 bits (21), Expect = 9.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 1079 gatcctcctacttcaacctcaccaagtaa 1107 |||||||||||||||||||| |||||||| Sbjct: 62316 gatcctcctacttcaacctc-ccaagtaa 62289
>emb|AL138741.13| Human DNA sequence from clone RP3-516D24 on chromosome 6, complete sequence Length = 67372 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 65896 caaataataataacaatagca 65916
>emb|AL121583.25|HSBA358N2 Human DNA sequence from clone RP11-358N2 on chromosome 20 Contains the 5' end of the ASXL1 gene for additional sex combs like 1 (Drosophila) and a CpG island, complete sequence Length = 84710 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 agaaaaagaaaatcataaaca 181 ||||||||||||||||||||| Sbjct: 22330 agaaaaagaaaatcataaaca 22310
>gb|AC151899.7| Mus musculus BAC clone RP24-170L4 from chromosome 7, complete sequence Length = 168239 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||| |||||| Sbjct: 4019 gcatcaccaacagaatataagagaaagaa 3991
>gb|AC093206.2| Homo sapiens chromosome 5 clone CTC-448D22, complete sequence Length = 161754 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtccttccctcattgcttgtt 151 ||||||||||||||||||||| Sbjct: 127410 gtccttccctcattgcttgtt 127390
>gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosome 13, complete sequence Length = 201777 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| | ||||||||||| Sbjct: 81201 gcatcaccaacagaatacaagaaaaagaa 81229
>gb|AC154441.3| Mus musculus BAC clone RP24-176O5 from chromosome 13, complete sequence Length = 169507 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2059 agataagaaaaagaatatgaatatt 2083 ||||||||||||| ||||||||||| Sbjct: 62324 agataagaaaaaggatatgaatatt 62300
>gb|AY056430.1| Arabidopsis thaliana AT4g18900/F13C5_70 mRNA, complete cds Length = 1793 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 ||||||||||||||| ||||||||| Sbjct: 371 tgatgaagaggatgatgaaattgaa 395
>gb|AC158516.2| Mus musculus BAC clone RP24-511A23 from chromosome 9, complete sequence Length = 167046 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cacatacatatatattgtcat 273 ||||||||||||||||||||| Sbjct: 119484 cacatacatatatattgtcat 119504
>ref|XM_650673.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (23.t00003) partial mRNA Length = 1596 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1612 taaaaagaattggaaaaagaagagattat 1640 ||||||||| |||||||||||||| |||| Sbjct: 1095 taaaaagaaatggaaaaagaagagtttat 1067
>gb|AF244890.1|AF244890 Glycine max receptor-like protein kinase 3 (RLK3) mRNA, complete cds Length = 3335 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 acctctacaacaacaacatga 474 ||||||||||||||||||||| Sbjct: 475 acctctacaacaacaacatga 495
>gb|AF244889.1|AF244889 Glycine max receptor-like protein kinase 2 (RLK2) mRNA, complete cds Length = 3123 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 acctctacaacaacaacatga 474 ||||||||||||||||||||| Sbjct: 451 acctctacaacaacaacatga 471
>gb|AF244888.1|AF244888 Glycine max receptor-like protein kinase 1 (RLK1) mRNA, complete cds Length = 3350 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 acctctacaacaacaacatga 474 ||||||||||||||||||||| Sbjct: 518 acctctacaacaacaacatga 538
>gb|AC025284.4|AC025284 Homo sapiens chromosome 16 clone RP11-449J10, complete sequence Length = 164603 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2079 atatttgtgtatcatataagggaaa 2103 ||||||||||||||| ||||||||| Sbjct: 125816 atatttgtgtatcatctaagggaaa 125840
>emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, complete sequence Length = 98918 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 81766 tttcaaataataataacaata 81786
>gb|AC087795.5|AC087795 Genomic Sequence for Mus musculus, clone RP23-181H5, complete sequence Length = 220811 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1331 atgttttcaaataataataacaata 1355 ||||||||||||||||| ||||||| Sbjct: 46723 atgttttcaaataataaaaacaata 46699
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1457 aataatgcatcatcatcattt 1477 ||||||||||||||||||||| Sbjct: 52630 aataatgcatcatcatcattt 52610
>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17I5 (ESSA project) Length = 86748 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1457 aataatgcatcatcatcattt 1477 ||||||||||||||||||||| Sbjct: 3606 aataatgcatcatcatcattt 3586
>emb|AJ132261.2|HSA132261 Homo sapiens mRNA for hypothetical helicase K12H4.8-like protein Length = 6200 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1492 tgatgatgaggatgaagaaattgaa 1516
>gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212483 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 89115 gcatcaccaacagaatataagaaatagaa 89087
>emb|BX005086.9| Mouse DNA sequence from clone RP23-149N22 on chromosome 11 Contains a novel pseudogene, a sperm specific antigen 1 (Ssfa1), a glycoprotein 38 (Gp38) pseudogene and a CpG island, complete sequence Length = 192406 Score = 42.1 bits (21), Expect = 9.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1978 agaggaaaagaaaacaaagaagcttaagaaaga 2010 ||||| |||||||||||||||||| ||||||| Sbjct: 9638 agagggaaagaaaacaaagaagctgcagaaaga 9606
>emb|AL731714.9| Mouse DNA sequence from clone RP23-117H24 on chromosome 11 Contains the gene for a novel protein (4933427E13Rik), complete sequence Length = 208133 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||| |||||| Sbjct: 145774 gcatcaccaacagaatataagacaaagaa 145746
>emb|AL592080.26| Mouse DNA sequence from clone RP23-102H10 on chromosome 11 Contains a endothelial differentiation-related factor 1 (Edf1) pseudogene, the 3' end of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik) and a CpG island, complete sequence Length = 216023 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 943 acaacagcagcaacaaggatc 963 ||||||||||||||||||||| Sbjct: 98248 acaacagcagcaacaaggatc 98268
>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12, complete sequence Length = 150475 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 55231 tttcaaataataataacaata 55211
>emb|BX323558.7| Zebrafish DNA sequence from clone CH211-214J24 in linkage group 4, complete sequence Length = 160379 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2074 tatgaatatttgtgtatcata 2094 ||||||||||||||||||||| Sbjct: 86322 tatgaatatttgtgtatcata 86302
>gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, complete sequence Length = 172331 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1780 tagaaagaaatatgtacaatt 1800 ||||||||||||||||||||| Sbjct: 75419 tagaaagaaatatgtacaatt 75399
>gb|AC053523.5| Homo sapiens BAC clone RP11-563J6 from 2, complete sequence Length = 172405 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1340 aataataataacaatagcatgatta 1364 |||||||||||||||||||| |||| Sbjct: 97767 aataataataacaatagcattatta 97743
>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence Length = 157775 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| | ||||||||||| Sbjct: 155164 gcatcaccaacagaatacaagaaaaagaa 155192
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1339 aaataataataacaatagcat 1359 ||||||||||||||||||||| Sbjct: 61490 aaataataataacaatagcat 61470
>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence Length = 132254 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 13247 tttcaaataataataacaata 13227
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1335 tttcaaataataataacaata 1355 ||||||||||||||||||||| Sbjct: 539562 tttcaaataataataacaata 539582
>emb|BX648923.1|HSM809074 Homo sapiens mRNA; cDNA DKFZp686H0429 (from clone DKFZp686H0429) Length = 5155 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1569 agaaagcccttccatcctcaa 1589 ||||||||||||||||||||| Sbjct: 446 agaaagcccttccatcctcaa 426
>gb|AC087799.43| Mus musculus strain C57BL/6J chromosome 16 clone rp23-198m10, complete sequence Length = 208011 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| | ||||||||||| Sbjct: 202503 gcatcaccaacagaatacaagaaaaagaa 202475
>emb|BX648357.1|HSM808505 Homo sapiens mRNA; cDNA DKFZp686M07174 (from clone DKFZp686M07174) Length = 4753 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1780 tagaaagaaatatgtacaatt 1800 ||||||||||||||||||||| Sbjct: 2699 tagaaagaaatatgtacaatt 2679
>gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y, complete sequence Length = 160302 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1457 aataatgcatcatcatcatttaatt 1481 ||||||||||||||||| ||||||| Sbjct: 81384 aataatgcatcatcatcctttaatt 81360
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 46381 accatcaccaccatcatcagctgat 46405
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1719 attatgcaatatttaaggaat 1739 ||||||||||||||||||||| Sbjct: 50649 attatgcaatatttaaggaat 50629
>emb|AL954694.13| Zebrafish DNA sequence from clone CH211-219F7 in linkage group 5, complete sequence Length = 111431 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1334 ttttcaaataataataacaatagca 1358 |||| |||||||||||||||||||| Sbjct: 49315 tttttaaataataataacaatagca 49339
>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence Length = 178624 Score = 42.1 bits (21), Expect = 9.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 1079 gatcctcctacttcaacctcaccaagtaa 1107 |||||||||||||||||||| |||||||| Sbjct: 68069 gatcctcctacttcaacctc-ccaagtaa 68042
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence Length = 213223 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1568 aagaaagcccttccatcctca 1588 ||||||||||||||||||||| Sbjct: 95555 aagaaagcccttccatcctca 95535
>dbj|AK110826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H08, full insert sequence Length = 1481 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 344 accatcaccaccatcatcagctgat 320
>dbj|AK109859.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G10, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 accatcaccaacatcatcagctgat 358 |||||||||| |||||||||||||| Sbjct: 1131 accatcaccaccatcatcagctgat 1155
>emb|BX827439.1|CNS0A2S9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1838 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 ||||||||||||||| ||||||||| Sbjct: 448 tgatgaagaggatgatgaaattgaa 472
>gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N15, complete sequence Length = 107553 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtccttccctcattgcttgtt 151 ||||||||||||||||||||| Sbjct: 50730 gtccttccctcattgcttgtt 50750
>gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, complete sequence Length = 252476 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 231661 gcatcaccaacagaatataagaaatagaa 231689
>dbj|AP002778.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-643C11, complete sequence Length = 160242 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtccttccctcattgcttgtt 151 ||||||||||||||||||||| Sbjct: 36256 gtccttccctcattgcttgtt 36236
>gb|AC153834.2| Mus musculus 6 BAC RP23-367J4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 152354 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 18437 gcatcaccaacagaatataagaaatagaa 18465
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence Length = 215708 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1568 aagaaagcccttccatcctca 1588 ||||||||||||||||||||| Sbjct: 196454 aagaaagcccttccatcctca 196474
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence Length = 110684 Score = 42.1 bits (21), Expect = 9.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2058 aagataagaaaaagaatatgaatatttgtgtat 2090 |||||| ||| | |||||||||||||||||||| Sbjct: 17245 aagatatgaatatgaatatgaatatttgtgtat 17213
>ref|XM_719211.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04054) partial mRNA Length = 3363 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 1574 caaataataataacaatagca 1594
>gb|BC046934.1| Homo sapiens cDNA clone IMAGE:6046171, containing frame-shift errors Length = 6013 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1451 tgatgatgaggatgaagaaattgaa 1475
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2043 atgcatcaccaacagaagataagaa 2067 ||||||||||||||||| ||||||| Sbjct: 95608 atgcatcaccaacagaatataagaa 95584
>gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, complete sequence Length = 186567 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 907 aagtagtattaacacaatgaa 927 ||||||||||||||||||||| Sbjct: 141905 aagtagtattaacacaatgaa 141925
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1973 gttgaagaggaaaagaaaaca 1993 ||||||||||||||||||||| Sbjct: 140269 gttgaagaggaaaagaaaaca 140249
>gb|AC004478.1|AC004478 Homo Sapiens Chromosome X clone bWXD312, complete sequence Length = 151822 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1457 aataatgcatcatcatcatttaatt 1481 ||||||||||||||||| ||||||| Sbjct: 25063 aataatgcatcatcatcctttaatt 25087
>emb|CT033773.8| Mouse DNA sequence from clone RP23-176M23 on chromosome 14, complete sequence Length = 133931 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 |||||||||||| || ||||||||||||| Sbjct: 37768 gcatcaccaacaaaatataagaaaaagaa 37740
>emb|CT572987.3| Mouse DNA sequence from clone RP23-473B8 on chromosome X, complete sequence Length = 41948 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tctgagaaaaagaaaatcata 177 ||||||||||||||||||||| Sbjct: 29466 tctgagaaaaagaaaatcata 29446
>gb|AC131733.3| Mus musculus BAC clone RP23-98C9 from 8, complete sequence Length = 203486 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 aacaagccatgtccaccaata 494 ||||||||||||||||||||| Sbjct: 48855 aacaagccatgtccaccaata 48875
>gb|AC140253.3| Mus musculus BAC clone RP23-298L2 from 3, complete sequence Length = 199167 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1612 taaaaagaattggaaaaagaa 1632 ||||||||||||||||||||| Sbjct: 97953 taaaaagaattggaaaaagaa 97933
>emb|AL732486.9| Mouse DNA sequence from clone RP23-90B3 on chromosome X, complete sequence Length = 252977 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 100438 gcatcaccaacagaatataagaaatagaa 100466
>gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, complete sequence Length = 172271 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| | ||||||||||| Sbjct: 39469 gcatcaccaacagaatacaagaaaaagaa 39497 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2059 agataagaaaaagaatatgaatatt 2083 ||||||||||||| ||||||||||| Sbjct: 147946 agataagaaaaaggatatgaatatt 147970
>gb|AC125046.3| Mus musculus BAC clone RP23-349O22 from 6, complete sequence Length = 223938 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 |||||||||||| || ||||||||||||| Sbjct: 175295 gcatcaccaacaaaatataagaaaaagaa 175267
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence Length = 204800 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1973 gttgaagaggaaaagaaaaca 1993 ||||||||||||||||||||| Sbjct: 41793 gttgaagaggaaaagaaaaca 41773
>gb|AF020409.1|AF020409 Dictyostelium discoideum DocA (docA) mRNA, complete cds Length = 2624 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 caaataataataacaatagca 1358 ||||||||||||||||||||| Sbjct: 551 caaataataataacaatagca 571
>ref|XM_724147.1| Plasmodium yoelii yoelii str. 17XNL cytoplasmic dynein 1 (PY01468) partial mRNA Length = 15162 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2053 aacagaagataagaaaaagaa 2073 ||||||||||||||||||||| Sbjct: 10518 aacagaagataagaaaaagaa 10538
>emb|AL844904.4| Mouse DNA sequence from clone RP23-315J3 on chromosome X, complete sequence Length = 186544 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||| |||||| Sbjct: 41207 gcatcaccaacagaatataagagaaagaa 41235
>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete sequence Length = 120515 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1451 aataataataatgcatcatcatcat 1475 |||||||||||| |||||||||||| Sbjct: 77973 aataataataattcatcatcatcat 77949
>emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chromosome X, complete sequence Length = 210533 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 67648 gcatcaccaacagaatataagaaatagaa 67676
>ref|XM_738037.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000077.01.0) partial mRNA Length = 1911 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1613 aaaaagaattggaaaaagaag 1633 ||||||||||||||||||||| Sbjct: 1385 aaaaagaattggaaaaagaag 1405
>gb|AC155326.8| Mus musculus 6 BAC RP24-72P18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184159 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 149140 gcatcaccaacagaatataagaaatagaa 149168
>emb|AL772201.19| Mouse DNA sequence from clone RP23-36L7 on chromosome 4, complete sequence Length = 193785 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1982 gaaaagaaaacaaagaagctt 2002 ||||||||||||||||||||| Sbjct: 157010 gaaaagaaaacaaagaagctt 157030
>emb|AL137191.5|CNS01DWH Human chromosome 14 DNA sequence BAC R-1112J20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 152510 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2061 ataagaaaaagaatatgaatatttg 2085 ||||||||||||||| ||||||||| Sbjct: 63015 ataagaaaaagaataagaatatttg 62991
>emb|AL356017.3|CNS05TD7 Human chromosome 14 DNA sequence BAC C-2240H23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 149635 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 47076 tgatgatgaggatgaagaaattgaa 47052
>gb|AC116708.19| Mus musculus chromosome 1, clone RP23-70F22, complete sequence Length = 214263 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 185640 gcatcaccaacagaatataagaaatagaa 185612
>dbj|AB028449.1| Homo sapiens mRNA for helicase-MOI, complete cds Length = 7037 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1439 tgatgatgaggatgaagaaattgaa 1463
>dbj|AB033029.1| Homo sapiens mRNA for KIAA1203 protein, partial cds Length = 6111 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1780 tagaaagaaatatgtacaatt 1800 ||||||||||||||||||||| Sbjct: 2486 tagaaagaaatatgtacaatt 2466
>dbj|AB029319.1| Bacillus sp. 41M-1 xynJ gene for xylanase J, complete cds Length = 2246 Score = 42.1 bits (21), Expect = 9.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 1613 aaaaagaattggaaaaagaagagattatt 1641 ||||||||||||||||| ||||||||||| Sbjct: 1774 aaaaagaattggaaaaa-aagagattatt 1801
>dbj|AB023145.2| Homo sapiens mRNA for KIAA0928 protein, partial cds Length = 6037 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2017 tgatgaagaggatgaagaaattgaa 2041 |||||| |||||||||||||||||| Sbjct: 1489 tgatgatgaggatgaagaaattgaa 1513
>emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chromosome 2, complete sequence Length = 122538 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2045 gcatcaccaacagaagataagaaaaagaa 2073 ||||||||||||||| |||||||| |||| Sbjct: 91929 gcatcaccaacagaatataagaaatagaa 91957 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 589,810,465 Number of extensions: 41190037 Number of successful extensions: 332689 Number of sequences better than 10.0: 216 Number of HSP's gapped: 332689 Number of HSP's successfully gapped: 218 Length of query: 2361 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2338 Effective length of database: 18,503,978,556 Effective search space: 43262301863928 Effective search space used: 43262301863928 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
