| Clone Name | FLbaf71c24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830664.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103M20, full insert sequence Length = 1090 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 686 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 742 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 743 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 802 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 803 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 862 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 863 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 919 Query: 427 cctacga 433 ||||||| Sbjct: 920 cctacga 926
>emb|CT834259.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044D20, full insert sequence Length = 962 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 213 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 269 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 270 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 329 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 330 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 389 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 390 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 446 Query: 427 cctacga 433 ||||||| Sbjct: 447 cctacga 453
>ref|NM_001056425.1| Oryza sativa (japonica cultivar-group) Os03g0306800 (Os03g0306800) mRNA, complete cds Length = 622 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 189 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 245 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 246 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 305 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 306 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 365 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 366 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 422 Query: 427 cctacga 433 ||||||| Sbjct: 423 cctacga 429
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Minus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 98486 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 98430 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 98429 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 98370 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 98369 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 98310 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 98309 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 98253 Query: 427 cctacga 433 ||||||| Sbjct: 98252 cctacga 98246
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 10880644 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 10880700 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 10880701 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 10880760 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10880761 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 10880820 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 10880821 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 10880877 Query: 427 cctacga 433 ||||||| Sbjct: 10880878 cctacga 10880884 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 1644828 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1644877
>dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B13, full insert sequence Length = 623 Score = 347 bits (175), Expect = 3e-92 Identities = 230/247 (93%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246 |||||| || ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 190 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 246 Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 306 Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 307 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 366 Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426 ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| Sbjct: 367 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 423 Query: 427 cctacga 433 ||||||| Sbjct: 424 cctacga 430
>gb|AY105513.1| Zea mays PCO138699 mRNA sequence Length = 747 Score = 210 bits (106), Expect = 5e-51 Identities = 201/232 (86%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 202 gctcgccgtccacgcccccggagctggcgcagaaggtgacggagagcatcaagcaggcgg 261 |||||||| ||||||| ||||| || || |||||||| | ||||||||||||||||| Sbjct: 184 gctcgccgcccacgccgccggatctcgcaaagaaggtgtccgagagcatcaagcaggccc 243 Query: 262 aggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcggcgtgggacgaggtgg 321 ||||||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 244 aggagacgtgcgcagatgacccggtgagcggcgagtgcgtggcggcgtgggacgaggtgg 303 Query: 322 aggagctcagcgccgcggccagccacgcgcgcgaccgcaagaaggaacacagcgacccgc 381 ||||||||||||| || |||||||| ||||||||| |||||| | |||||||| Sbjct: 304 aggagctcagcgcggccaccagccacttgcgcgaccggcagaagg---gcgccgacccgc 360 Query: 382 tcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 ||||||||| |||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 361 tcgaggagtactgcaaggacaaccccgagaccgacgagtgccgcacgtacga 412
>gb|DQ245880.1| Zea mays clone 21627 mRNA sequence Length = 669 Score = 143 bits (72), Expect = 9e-31 Identities = 113/126 (89%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 234 aaggtgacggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggc 293 |||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 294 aaggtgtcggagagcatcaagcaggcggaggagacgtgcgcggacgaccagaagggcgac 353 Query: 294 g---agtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcg 350 | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 354 gccgagtgcgcggcggcgtgggacgaggtggaggagctcagcgccacggccagccacgcc 413 Query: 351 cgcgac 356 |||||| Sbjct: 414 cgcgac 419 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 ||||||||||||| ||| |||| |||||||||| || |||| |||||||||| |||||| Sbjct: 443 cgacccgctcgagaagtactgcaaggacaacccggactccgaggagtgccgcatctacga 502 Query: 434 cagctagc 441 || ||||| Sbjct: 503 caactagc 510
>gb|AY106304.1| Zea mays PCO097673 mRNA sequence Length = 791 Score = 143 bits (72), Expect = 9e-31 Identities = 113/126 (89%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 234 aaggtgacggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggc 293 |||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 332 aaggtgtcggagagcatcaagcaggcggaggagacgtgcgcggacgaccagaagggcgac 391 Query: 294 g---agtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcg 350 | |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 392 gccgagtgcgcggcggcgtgggacgaggtggaggagctcagcgccacggccagccacgcc 451 Query: 351 cgcgac 356 |||||| Sbjct: 452 cgcgac 457 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 ||||||||||||| ||| |||| |||||||||| || |||| |||||||||| |||||| Sbjct: 481 cgacccgctcgagaagtactgcaaggacaacccggactccgaggagtgccgcatctacga 540 Query: 434 cagctagc 441 || ||||| Sbjct: 541 caactagc 548
>ref|NM_001049365.1| Oryza sativa (japonica cultivar-group) Os01g0303000 (Os01g0303000) mRNA, complete cds Length = 723 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 245 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 304 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 305 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 360 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437 Query: 434 ca 435 || Sbjct: 438 ca 439
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 11201163 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 11201104 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 11201103 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 11201048 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 11201030 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 11200971 Query: 434 ca 435 || Sbjct: 11200970 ca 11200969
>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146F03 Length = 137047 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 92956 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 92897 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 92896 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 92841 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 92823 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 92764 Query: 434 ca 435 || Sbjct: 92763 ca 92762
>dbj|AK102013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080D15, full insert sequence Length = 710 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 245 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 304 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 305 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 360 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437 Query: 434 ca 435 || Sbjct: 438 ca 439
>dbj|AK066266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056L22, full insert sequence Length = 712 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 247 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 306 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 307 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 362 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 380 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 439 Query: 434 ca 435 || Sbjct: 440 ca 441
>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035H10 Length = 109475 Score = 111 bits (56), Expect = 3e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | |||||||||||| Sbjct: 99896 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 99837 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 99836 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 99781 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 99763 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 99704 Query: 434 ca 435 || Sbjct: 99703 ca 99702
>emb|CT830975.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008H16, full insert sequence Length = 720 Score = 103 bits (52), Expect = 8e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300 ||||||||||| | ||||| ||||| ||||||||| ||| | | | ||||| |||||| Sbjct: 253 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcaagtgcg 312 Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 313 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 368 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 386 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 445 Query: 434 ca 435 || Sbjct: 446 ca 447
>dbj|AK058929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C09, full insert sequence Length = 723 Score = 103 bits (52), Expect = 8e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348 |||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 293 gcggcgagtgcgcggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacg 352 Query: 349 cgcgcgac 356 |||||||| Sbjct: 353 cgcgcgac 360 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433 |||||||||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437 Query: 434 ca 435 || Sbjct: 438 ca 439
>gb|AF498269.1| Haynaldia villosa clone kong32 mRNA Length = 1219 Score = 97.6 bits (49), Expect = 5e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gcggggagtgcgccgcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 314 Query: 349 c 349 | Sbjct: 313 c 313 Score = 87.7 bits (44), Expect = 5e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 375 gacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacgac 434 |||||||||||| | | |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 290 gacccgctcgagaactactgcaaggagaaccccgagaccgacgagtgccgcacctacgac 231 Query: 435 agct 438 |||| Sbjct: 230 agct 227
>gb|DQ244659.1| Zea mays clone 9947 mRNA sequence Length = 597 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 244 agagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtgg 303 ||||||||||| | || |||||||| || ||||| || |||||| |||| ||||| || | Sbjct: 241 agagcatcaaggacgcagaggagacttgtgcgggagatccagtgagcggagagtgtgtag 300 Query: 304 cggcgtgggacgaggtggaggagctcagcgccgcggccagccacgc 349 | |||||||||||||| |||||||| ||||| || || |||||||| Sbjct: 301 ctgcgtgggacgaggtcgaggagctaagcgcagcagctagccacgc 346
>emb|Z72487.1|SOCP12 S.oleracea mRNA for CP12 Length = 523 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 279 gacccagtgggcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 ||||| ||| |||||||||| |||||||||||||||| |||||||||||| Sbjct: 243 gacccggtgagcggcgagtgtgtggcggcgtgggacgtggtggaggagct 292
>gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||||||||||||||||||| Sbjct: 1524 gcgaccctctggaggacttctgcaaggacaaccccgagaccgacgagtgc 1573
>gb|M95076.1|MZEORFQ Zea mays putative glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds Length = 188 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||||||||||||||||||| Sbjct: 107 gcgaccctctggaggacttctgcaaggacaaccccgagaccgacgagtgc 156
>emb|AJ011571.1|CPA011571 Cyanophora paradoxa mRNA for hypothetical protein, partial Length = 386 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 385 aggagttctgcgaggacaaccccgagaccgacgagtgccgc 425 ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 205 aggagttctgcaaggagaaccccgagaccgacgagtgccgc 245
>emb|CT828781.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005C05, full insert sequence Length = 408 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 113 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 162
>ref|NM_001055382.1| Oryza sativa (japonica cultivar-group) Os03g0129300 (Os03g0129300) mRNA, complete cds Length = 1666 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 1322 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1371
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 52276 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 52325
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 124391 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 124440
>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full insert sequence Length = 1668 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 1323 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1372
>dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A08, full insert sequence Length = 892 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 593 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 642
>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239, complete sequence Length = 106506 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348 |||||||||| | ||||| ||||| |||||||||||||| ||||| ||||| ||||||| Sbjct: 55148 gcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcgagccacg 55089 Query: 349 cg 350 || Sbjct: 55088 cg 55087
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422 ||||||| || ||||| |||||| |||||||||| ||||||||||||||| Sbjct: 57293 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 57342
>emb|Z72489.1|PSCP12 P.sativum mRNA for CP12 Length = 587 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 297 tgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggc 340 ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 290 tgcgtagcggcgtgggatgaggtggaggaactcagcgcggcggc 333
>emb|AJ005285.1|CPAJ5285 Ceratodon purpureus mRNA for Calvin cycle CP12 protein (partial) Length = 98 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggagctcagcgc 334 ||||||||| |||||||||||||||||||| Sbjct: 66 ggcgtgggatgaggtggaggagctcagcgc 95
>ref|NM_130308.2| Arabidopsis thaliana CP12-1 (CP12-1) mRNA, complete cds Length = 585 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 256 gcggggagtgtgtagcggcttgggacgaggtggaggagct 295
>gb|AY143796.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds Length = 375 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 221 gcggggagtgtgtagcggcttgggacgaggtggaggagct 260
>gb|AY114595.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400) mRNA, complete cds Length = 470 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 221 gcggggagtgtgtagcggcttgggacgaggtggaggagct 260
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 81385 gcggggagtgtgtagcggcttgggacgaggtggaggagct 81424
>gb|AY062839.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400; T8I13.24) mRNA, complete cds Length = 549 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 240 gcggggagtgtgtagcggcttgggacgaggtggaggagct 279
>gb|AY052217.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds Length = 565 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 256 gcggggagtgtgtagcggcttgggacgaggtggaggagct 295
>emb|BX819333.1|CNS0A8U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 490 Score = 48.1 bits (24), Expect = 0.041 Identities = 36/40 (90%) Strand = Plus / Plus Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328 |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 189 gcggggagtgtgtagcggcttgggacgaggtggaggagct 228
>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds Length = 1953 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 gcgtgggacgaggtggaggagct 328 ||||||||||||||||||||||| Sbjct: 300 gcgtgggacgaggtggaggagct 278
>ref|NM_001068759.1| Oryza sativa (japonica cultivar-group) Os08g0513100 (Os08g0513100) mRNA, partial cds Length = 518 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 227 ggcgtgggacgaggtggaggag 248
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 197 ggcgggctcgccgtccacgccc 218 |||||||||||||||||||||| Sbjct: 2465369 ggcgggctcgccgtccacgccc 2465390
>gb|DQ270256.1| Mesostigma viride CP12 (CP12) mRNA, complete cds Length = 837 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 375 gacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccg 424 ||||| || ||| ||||||| || |||||||| ||||| ||||||||||| Sbjct: 364 gacccccttgagaagttctgtgaagacaaccctgagactgacgagtgccg 413
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 agcaggcggaggagacgtgcgc 274 |||||||||||||||||||||| Sbjct: 8626721 agcaggcggaggagacgtgcgc 8626742
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 25434253 ggcgtgggacgaggtggaggag 25434274 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 25443996 ggcgtgggacgaggtggaggag 25444017
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence Length = 120704 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gtggcggcgtgggacgaggtggagga 325 |||||||||||||| ||||||||||| Sbjct: 40044 gtggcggcgtgggatgaggtggagga 40069
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 65569 ggcgtgggacgaggtggaggag 65590 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 75312 ggcgtgggacgaggtggaggag 75333
>dbj|AK107793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D07, full insert sequence Length = 518 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggag 326 |||||||||||||||||||||| Sbjct: 227 ggcgtgggacgaggtggaggag 248
>emb|BX819584.1|CNS0A8ZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 528 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gcggcgtgggacgaggtggaggagct 328 ||||| |||||||||||||||||||| Sbjct: 231 gcggcttgggacgaggtggaggagct 256
>emb|AJ005284.1|CRAJ5284 Chlamydomonas reinhardtii mRNA for Calvin cycle CP12 protein (partial) Length = 121 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 ggcgtgggacgaggtggaggagctcagcgc 334 ||||||||| ||||||||||| |||||||| Sbjct: 24 ggcgtgggatgaggtggaggaactcagcgc 53
>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125000 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 agcaggcggaggagacgtgcgc 274 |||||||||||||||||||||| Sbjct: 89468 agcaggcggaggagacgtgcgc 89489
>ref|XM_001224794.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07139) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 cgaggtggaggagctcagcgc 334 ||||||||||||||||||||| Sbjct: 723 cgaggtggaggagctcagcgc 743
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gccaccatcaccaccatggcc 71 ||||||||||||||||||||| Sbjct: 11632871 gccaccatcaccaccatggcc 11632891
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gcggccagccacgcgcgcgac 356 ||||||||||||||||||||| Sbjct: 1726551 gcggccagccacgcgcgcgac 1726571
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccaccttcctgcgaaccaagt 39 ||||||||||||||||||||| Sbjct: 43061 ccaccttcctgcgaaccaagt 43081
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 ggcggcgtgggacgaggtggaggag 326 ||||||||||||||||| ||||||| Sbjct: 5011 ggcggcgtgggacgaggaggaggag 5035
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 ggcggcgtgggacgaggtggaggag 326 ||||||||||||||||| ||||||| Sbjct: 44238 ggcggcgtgggacgaggaggaggag 44262
>ref|XM_533419.2| PREDICTED: Canis familiaris similar to microtubule-associated protein 7 (LOC476214), mRNA Length = 2621 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 ggagctggcgcagaaggtgacggag 245 ||||||||||||||||||| ||||| Sbjct: 1605 ggagctggcgcagaaggtggcggag 1629
>ref|XM_460776.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F10461g) partial mRNA Length = 1428 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 catggccttcatggccacctt 85 ||||||||||||||||||||| Sbjct: 213 catggccttcatggccacctt 193
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tcagcgccgcggccagccacg 348 ||||||||||||||||||||| Sbjct: 5053684 tcagcgccgcggccagccacg 5053704
>ref|XM_808113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509911.120) partial mRNA Length = 4956 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cccgagcgtcgtgtcgttcgc 154 ||||||||||||||||||||| Sbjct: 3468 cccgagcgtcgtgtcgttcgc 3448
>ref|XM_802796.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507389.30) partial mRNA Length = 4095 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cccgagcgtcgtgtcgttcgc 154 ||||||||||||||||||||| Sbjct: 3468 cccgagcgtcgtgtcgttcgc 3448
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccaccttcctgcgaaccaagt 39 ||||||||||||||||||||| Sbjct: 1087450 ccaccttcctgcgaaccaagt 1087470 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 ggcggcgtgggacgaggtggaggag 326 ||||||||||||||||| ||||||| Sbjct: 21451155 ggcggcgtgggacgaggaggaggag 21451179
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 gtggcgggctcgccgtccacg 215 ||||||||||||||||||||| Sbjct: 1396989 gtggcgggctcgccgtccacg 1396969
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 catggccttcatggccacctt 85 ||||||||||||||||||||| Sbjct: 834489 catggccttcatggccacctt 834469
>emb|CR382342.5| Zebrafish DNA sequence from clone DKEY-208E17 in linkage group 14, complete sequence Length = 67870 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagtttggtttgttgctttat 558 ||||||||||||||||||||| Sbjct: 62870 aagtttggtttgttgctttat 62890
>gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, region 89A-89A, BAC clone BACR06B08, complete sequence Length = 151447 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gccaccatcaccaccatggcc 71 ||||||||||||||||||||| Sbjct: 51325 gccaccatcaccaccatggcc 51345
>ref|XM_957719.1| Neurospora crassa OR74A hypothetical protein (NCU07879.1) partial mRNA Length = 1176 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccatggccaccatcaccaccatgg 69 ||||||| ||||||||||||||||| Sbjct: 467 gccatggacaccatcaccaccatgg 491
>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone BACR48G17, complete sequence Length = 179122 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 gccaccatcaccaccatggcc 71 ||||||||||||||||||||| Sbjct: 162338 gccaccatcaccaccatggcc 162358 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 94,530,713 Number of extensions: 5225794 Number of successful extensions: 135293 Number of sequences better than 10.0: 70 Number of HSP's gapped: 135274 Number of HSP's successfully gapped: 88 Length of query: 679 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 657 Effective length of database: 18,508,616,841 Effective search space: 12160161264537 Effective search space used: 12160161264537 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)