ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf71c24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT830664.1| Oryza sativa (indica cultivar-group) cDNA clone:... 347 3e-92
2emb|CT834259.1| Oryza sativa (indica cultivar-group) cDNA clone:... 347 3e-92
3ref|NM_001056425.1| Oryza sativa (japonica cultivar-group) Os03g... 347 3e-92
4gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 347 3e-92
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 347 3e-92
6dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 3e-92
7gb|AY105513.1| Zea mays PCO138699 mRNA sequence 210 5e-51
8gb|DQ245880.1| Zea mays clone 21627 mRNA sequence 143 9e-31
9gb|AY106304.1| Zea mays PCO097673 mRNA sequence 143 9e-31
10ref|NM_001049365.1| Oryza sativa (japonica cultivar-group) Os01g... 111 3e-21
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
12dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
13dbj|AK102013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
14dbj|AK066266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
15dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
16emb|CT830975.1| Oryza sativa (indica cultivar-group) cDNA clone:... 103 8e-19
17dbj|AK058929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 8e-19
18gb|AF498269.1| Haynaldia villosa clone kong32 mRNA 98 5e-17
19gb|DQ244659.1| Zea mays clone 9947 mRNA sequence 76 2e-10
20emb|Z72487.1|SOCP12 S.oleracea mRNA for CP12 68 4e-08
21gb|AY103974.1| Zea mays PCO123560 mRNA sequence 68 4e-08
22gb|M95076.1|MZEORFQ Zea mays putative glyceraldehyde-3-phosphate... 68 4e-08
23emb|AJ011571.1|CPA011571 Cyanophora paradoxa mRNA for hypothetic... 66 2e-07
24emb|CT828781.1| Oryza sativa (indica cultivar-group) cDNA clone:... 60 1e-05
25ref|NM_001055382.1| Oryza sativa (japonica cultivar-group) Os03g... 60 1e-05
26gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
27gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
28dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
29dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
30dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone... 60 1e-05
31dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
32emb|Z72489.1|PSCP12 P.sativum mRNA for CP12 56 2e-04
33emb|AJ005285.1|CPAJ5285 Ceratodon purpureus mRNA for Calvin cycl... 52 0.003
34ref|NM_130308.2| Arabidopsis thaliana CP12-1 (CP12-1) mRNA, comp... 48 0.041
35gb|AY143796.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, com... 48 0.041
36gb|AY114595.1| Arabidopsis thaliana putative chloroplast protein... 48 0.041
37gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map... 48 0.041
38gb|AY062839.1| Arabidopsis thaliana putative chloroplast protein... 48 0.041
39gb|AY052217.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, com... 48 0.041
40emb|BX819333.1|CNS0A8U2 Arabidopsis thaliana Full-length cDNA Co... 48 0.041
41dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 k... 46 0.16
42ref|NM_001068759.1| Oryza sativa (japonica cultivar-group) Os08g... 44 0.64
43emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 44 0.64
44gb|DQ270256.1| Mesostigma viride CP12 (CP12) mRNA, complete cds 44 0.64
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.64
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.64
47gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete se... 44 0.64
48dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.64
49dbj|AK107793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.64
50emb|BX819584.1|CNS0A8ZQ Arabidopsis thaliana Full-length cDNA Co... 44 0.64
51emb|AJ005284.1|CRAJ5284 Chlamydomonas reinhardtii mRNA for Calvi... 44 0.64
52emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.64
53ref|XM_001224794.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 2.5
54gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s... 42 2.5
55gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.5
56gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
57gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
58gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
59ref|XM_533419.2| PREDICTED: Canis familiaris similar to microtub... 42 2.5
60ref|XM_460776.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.5
61gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 2.5
62ref|XM_808113.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.5
63ref|XM_802796.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.5
64dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
65gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.5
66emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 42 2.5
67emb|CR382342.5| Zebrafish DNA sequence from clone DKEY-208E17 in... 42 2.5
68gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, r... 42 2.5
69ref|XM_957719.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.5
70gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, r... 42 2.5

>emb|CT830664.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103M20, full
           insert sequence
          Length = 1090
 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Plus

                                                                       
Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
           |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 686 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 742

                                                                       
Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
           ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 743 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 802

                                                                       
Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 803 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 862

                                                                       
Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
              ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 863 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 919

                  
Query: 427 cctacga 433
           |||||||
Sbjct: 920 cctacga 926



to top

>emb|CT834259.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044D20, full
           insert sequence
          Length = 962

 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Plus

                                                                       
Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
           |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 213 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 269

                                                                       
Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
           ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 270 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 329

                                                                       
Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 330 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 389

                                                                       
Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
              ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 390 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 446

                  
Query: 427 cctacga 433
           |||||||
Sbjct: 447 cctacga 453



to top

>ref|NM_001056425.1| Oryza sativa (japonica cultivar-group) Os03g0306800 (Os03g0306800)
           mRNA, complete cds
          Length = 622

 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Plus

                                                                       
Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
           |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 189 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 245

                                                                       
Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
           ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 246 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 305

                                                                       
Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 306 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 365

                                                                       
Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
              ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 366 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 422

                  
Query: 427 cctacga 433
           |||||||
Sbjct: 423 cctacga 429



to top

>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                         
Query: 187   tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
             |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 98486 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 98430

                                                                         
Query: 247   gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
             ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 98429 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 98370

                                                                         
Query: 307   cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 98369 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 98310

                                                                         
Query: 367   aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
                ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 98309 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 98253

                    
Query: 427   cctacga 433
             |||||||
Sbjct: 98252 cctacga 98246



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Plus

                                                                            
Query: 187      tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
                |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 10880644 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 10880700

                                                                            
Query: 247      gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
                ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 10880701 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 10880760

                                                                            
Query: 307      cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10880761 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 10880820

                                                                            
Query: 367      aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
                   ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 10880821 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 10880877

                       
Query: 427      cctacga 433
                |||||||
Sbjct: 10880878 cctacga 10880884



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 373     gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
               ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 1644828 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1644877



to top

>dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B13, full
           insert sequence
          Length = 623

 Score =  347 bits (175), Expect = 3e-92
 Identities = 230/247 (93%), Gaps = 6/247 (2%)
 Strand = Plus / Plus

                                                                       
Query: 187 tggtggccgtggcgggctcgccgtccacgcccccggagctggcgcagaaggtgacggaga 246
           |||||| || |||||||||||||   ||||| ||||||||||||||||||||| ||||||
Sbjct: 190 tggtggtcgcggcgggctcgccg---acgccgccggagctggcgcagaaggtgtcggaga 246

                                                                       
Query: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcgg 306
           ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 247 gcatcaagcaggcggaggagacgtgcgcgggcgacccggagggcggcgagtgcgcggcgg 306

                                                                       
Query: 307 cgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgaccgcaagaagg 366
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 307 cgtgggacgaggtggaggagctcagcgccgccgccagccacgcgcgcgaccgcaagaagg 366

                                                                       
Query: 367 aacacagcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgca 426
              ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct: 367 ---acagcgacccgctcgaggagtactgcaaggacaacccggagaccgacgagtgccgca 423

                  
Query: 427 cctacga 433
           |||||||
Sbjct: 424 cctacga 430



to top

>gb|AY105513.1| Zea mays PCO138699 mRNA sequence
          Length = 747

 Score =  210 bits (106), Expect = 5e-51
 Identities = 201/232 (86%), Gaps = 3/232 (1%)
 Strand = Plus / Plus

                                                                       
Query: 202 gctcgccgtccacgcccccggagctggcgcagaaggtgacggagagcatcaagcaggcgg 261
           |||||||| ||||||| ||||| || ||  |||||||| | |||||||||||||||||  
Sbjct: 184 gctcgccgcccacgccgccggatctcgcaaagaaggtgtccgagagcatcaagcaggccc 243

                                                                       
Query: 262 aggagacgtgcgcgggcgacccagtgggcggcgagtgcgtggcggcgtgggacgaggtgg 321
           ||||||||||||| |  ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 244 aggagacgtgcgcagatgacccggtgagcggcgagtgcgtggcggcgtgggacgaggtgg 303

                                                                       
Query: 322 aggagctcagcgccgcggccagccacgcgcgcgaccgcaagaaggaacacagcgacccgc 381
           ||||||||||||| ||  ||||||||  |||||||||  ||||||    |  ||||||||
Sbjct: 304 aggagctcagcgcggccaccagccacttgcgcgaccggcagaagg---gcgccgacccgc 360

                                                               
Query: 382 tcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 361 tcgaggagtactgcaaggacaaccccgagaccgacgagtgccgcacgtacga 412



to top

>gb|DQ245880.1| Zea mays clone 21627 mRNA sequence
          Length = 669

 Score =  143 bits (72), Expect = 9e-31
 Identities = 113/126 (89%), Gaps = 3/126 (2%)
 Strand = Plus / Plus

                                                                       
Query: 234 aaggtgacggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggc 293
           |||||| |||||||||||||||||||||||||||||||||||| |||||    ||||| |
Sbjct: 294 aaggtgtcggagagcatcaagcaggcggaggagacgtgcgcggacgaccagaagggcgac 353

                                                                       
Query: 294 g---agtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcg 350
           |   |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 354 gccgagtgcgcggcggcgtgggacgaggtggaggagctcagcgccacggccagccacgcc 413

                 
Query: 351 cgcgac 356
           ||||||
Sbjct: 414 cgcgac 419



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||| ||| |||| |||||||||| ||  |||| |||||||||| ||||||
Sbjct: 443 cgacccgctcgagaagtactgcaaggacaacccggactccgaggagtgccgcatctacga 502

                   
Query: 434 cagctagc 441
           || |||||
Sbjct: 503 caactagc 510



to top

>gb|AY106304.1| Zea mays PCO097673 mRNA sequence
          Length = 791

 Score =  143 bits (72), Expect = 9e-31
 Identities = 113/126 (89%), Gaps = 3/126 (2%)
 Strand = Plus / Plus

                                                                       
Query: 234 aaggtgacggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggc 293
           |||||| |||||||||||||||||||||||||||||||||||| |||||    ||||| |
Sbjct: 332 aaggtgtcggagagcatcaagcaggcggaggagacgtgcgcggacgaccagaagggcgac 391

                                                                       
Query: 294 g---agtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcg 350
           |   |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 392 gccgagtgcgcggcggcgtgggacgaggtggaggagctcagcgccacggccagccacgcc 451

                 
Query: 351 cgcgac 356
           ||||||
Sbjct: 452 cgcgac 457



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||| ||| |||| |||||||||| ||  |||| |||||||||| ||||||
Sbjct: 481 cgacccgctcgagaagtactgcaaggacaacccggactccgaggagtgccgcatctacga 540

                   
Query: 434 cagctagc 441
           || |||||
Sbjct: 541 caactagc 548



to top

>ref|NM_001049365.1| Oryza sativa (japonica cultivar-group) Os01g0303000 (Os01g0303000)
           mRNA, complete cds
          Length = 723

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
           ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 245 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 304

                                                                   
Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
            ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 305 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 360



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437

             
Query: 434 ca 435
           ||
Sbjct: 438 ca 439



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 241      cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
                ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 11201163 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 11201104

                                                                        
Query: 301      tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
                 ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 11201103 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 11201048



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                            
Query: 374      cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
                ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 11201030 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 11200971

                  
Query: 434      ca 435
                ||
Sbjct: 11200970 ca 11200969



to top

>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146F03
          Length = 137047

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                         
Query: 241   cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
             ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 92956 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 92897

                                                                     
Query: 301   tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
              ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 92896 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 92841



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 374   cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
             ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 92823 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 92764

               
Query: 434   ca 435
             ||
Sbjct: 92763 ca 92762



to top

>dbj|AK102013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080D15, full
           insert sequence
          Length = 710

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
           ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 245 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 304

                                                                   
Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
            ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 305 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 360



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437

             
Query: 434 ca 435
           ||
Sbjct: 438 ca 439



to top

>dbj|AK066266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056L22, full
           insert sequence
          Length = 712

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
           ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 247 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 306

                                                                   
Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
            ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 307 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 362



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 380 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 439

             
Query: 434 ca 435
           ||
Sbjct: 440 ca 441



to top

>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0035H10
          Length = 109475

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                         
Query: 241   cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
             ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||||||||||
Sbjct: 99896 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcgagtgcg 99837

                                                                     
Query: 301   tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
              ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 99836 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 99781



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 374   cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
             ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 99763 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 99704

               
Query: 434   ca 435
             ||
Sbjct: 99703 ca 99702



to top

>emb|CT830975.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008H16, full
           insert sequence
          Length = 720

 Score =  103 bits (52), Expect = 8e-19
 Identities = 100/116 (86%)
 Strand = Plus / Plus

                                                                       
Query: 241 cggagagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcg 300
           ||||||||||| |  ||||| ||||| |||||||||  ||| | | | ||||| ||||||
Sbjct: 253 cggagagcatcgacaaggcgaaggaggcgtgcgcggaggacacggcgagcggcaagtgcg 312

                                                                   
Query: 301 tggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacgcgcgcgac 356
            ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 313 cggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacgcgcgcgac 368



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 386 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 445

             
Query: 434 ca 435
           ||
Sbjct: 446 ca 447



to top

>dbj|AK058929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C09, full
           insert sequence
          Length = 723

 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                       
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348
           |||||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 293 gcggcgagtgcgcggcggcgtgggacgaggtggaggagctgagcgcggcggcgagccacg 352

                   
Query: 349 cgcgcgac 356
           ||||||||
Sbjct: 353 cgcgcgac 360



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 374 cgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacga 433
           ||||||||||||||  | |||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 378 cgacccgctcgaggcctactgcaaggacaacccggagaccgacgagtgccgcacctacga 437

             
Query: 434 ca 435
           ||
Sbjct: 438 ca 439



to top

>gb|AF498269.1| Haynaldia villosa clone kong32 mRNA
          Length = 1219

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                       
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348
           |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcggggagtgcgccgcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 314

            
Query: 349 c 349
           |
Sbjct: 313 c 313



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                       
Query: 375 gacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccgcacctacgac 434
           |||||||||||| | | |||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 290 gacccgctcgagaactactgcaaggagaaccccgagaccgacgagtgccgcacctacgac 231

               
Query: 435 agct 438
           ||||
Sbjct: 230 agct 227



to top

>gb|DQ244659.1| Zea mays clone 9947 mRNA sequence
          Length = 597

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 agagcatcaagcaggcggaggagacgtgcgcgggcgacccagtgggcggcgagtgcgtgg 303
           ||||||||||| | || |||||||| || ||||| || |||||| |||| ||||| || |
Sbjct: 241 agagcatcaaggacgcagaggagacttgtgcgggagatccagtgagcggagagtgtgtag 300

                                                         
Query: 304 cggcgtgggacgaggtggaggagctcagcgccgcggccagccacgc 349
           | |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 301 ctgcgtgggacgaggtcgaggagctaagcgcagcagctagccacgc 346



to top

>emb|Z72487.1|SOCP12 S.oleracea mRNA for CP12
          Length = 523

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 279 gacccagtgggcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           ||||| ||| |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 243 gacccggtgagcggcgagtgtgtggcggcgtgggacgtggtggaggagct 292



to top

>gb|AY103974.1| Zea mays PCO123560 mRNA sequence
          Length = 1889

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 373  gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
            ||||||| || ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 1524 gcgaccctctggaggacttctgcaaggacaaccccgagaccgacgagtgc 1573



to top

>gb|M95076.1|MZEORFQ Zea mays putative glyceraldehyde-3-phosphate dehydrogenase mRNA,
           partial cds
          Length = 188

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
           ||||||| || ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 107 gcgaccctctggaggacttctgcaaggacaaccccgagaccgacgagtgc 156



to top

>emb|AJ011571.1|CPA011571 Cyanophora paradoxa mRNA for hypothetical protein, partial
          Length = 386

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 385 aggagttctgcgaggacaaccccgagaccgacgagtgccgc 425
           ||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 205 aggagttctgcaaggagaaccccgagaccgacgagtgccgc 245



to top

>emb|CT828781.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005C05, full
           insert sequence
          Length = 408

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
           ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 113 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 162



to top

>ref|NM_001055382.1| Oryza sativa (japonica cultivar-group) Os03g0129300 (Os03g0129300)
            mRNA, complete cds
          Length = 1666

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 373  gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
            ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 1322 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1371



to top

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 373   gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
             ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 52276 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 52325



to top

>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 373    gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
              ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 124391 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 124440



to top

>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full
            insert sequence
          Length = 1668

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 373  gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
            ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 1323 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 1372



to top

>dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A08, full
           insert sequence
          Length = 892

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 373 gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
           ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 593 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 642



to top

>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239,
             complete sequence
          Length = 106506

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 289   gcggcgagtgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggccagccacg 348
             |||||||||| |  ||||| ||||| |||||||||||||| ||||| ||||| |||||||
Sbjct: 55148 gcggcgagtgtgccgcggcttgggatgaggtggaggagctgagcgcggcggcgagccacg 55089

               
Query: 349   cg 350
             ||
Sbjct: 55088 cg 55087



to top

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 373   gcgacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgc 422
             ||||||| || ||||| |||||| |||||||||| |||||||||||||||
Sbjct: 57293 gcgacccactggaggacttctgcaaggacaacccggagaccgacgagtgc 57342



to top

>emb|Z72489.1|PSCP12 P.sativum mRNA for CP12
          Length = 587

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 297 tgcgtggcggcgtgggacgaggtggaggagctcagcgccgcggc 340
           ||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct: 290 tgcgtagcggcgtgggatgaggtggaggaactcagcgcggcggc 333



to top

>emb|AJ005285.1|CPAJ5285 Ceratodon purpureus mRNA for Calvin cycle CP12 protein (partial)
          Length = 98

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 305 ggcgtgggacgaggtggaggagctcagcgc 334
           ||||||||| ||||||||||||||||||||
Sbjct: 66  ggcgtgggatgaggtggaggagctcagcgc 95



to top

>ref|NM_130308.2| Arabidopsis thaliana CP12-1 (CP12-1) mRNA, complete cds
          Length = 585

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 256 gcggggagtgtgtagcggcttgggacgaggtggaggagct 295



to top

>gb|AY143796.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds
          Length = 375

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 221 gcggggagtgtgtagcggcttgggacgaggtggaggagct 260



to top

>gb|AY114595.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400)
           mRNA, complete cds
          Length = 470

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 221 gcggggagtgtgtagcggcttgggacgaggtggaggagct 260



to top

>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete
             sequence
          Length = 88068

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 289   gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
             |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 81385 gcggggagtgtgtagcggcttgggacgaggtggaggagct 81424



to top

>gb|AY062839.1| Arabidopsis thaliana putative chloroplast protein CP12 (At2g47400;
           T8I13.24) mRNA, complete cds
          Length = 549

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 240 gcggggagtgtgtagcggcttgggacgaggtggaggagct 279



to top

>gb|AY052217.1| Arabidopsis thaliana At2g47400/T8I13.24 mRNA, complete cds
          Length = 565

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 256 gcggggagtgtgtagcggcttgggacgaggtggaggagct 295



to top

>emb|BX819333.1|CNS0A8U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZG11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 490

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 gcggcgagtgcgtggcggcgtgggacgaggtggaggagct 328
           |||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 189 gcggggagtgtgtagcggcttgggacgaggtggaggagct 228



to top

>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds
          Length = 1953

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 306 gcgtgggacgaggtggaggagct 328
           |||||||||||||||||||||||
Sbjct: 300 gcgtgggacgaggtggaggagct 278



to top

>ref|NM_001068759.1| Oryza sativa (japonica cultivar-group) Os08g0513100 (Os08g0513100)
           mRNA, partial cds
          Length = 518

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 305 ggcgtgggacgaggtggaggag 326
           ||||||||||||||||||||||
Sbjct: 227 ggcgtgggacgaggtggaggag 248



to top

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 197     ggcgggctcgccgtccacgccc 218
               ||||||||||||||||||||||
Sbjct: 2465369 ggcgggctcgccgtccacgccc 2465390



to top

>gb|DQ270256.1| Mesostigma viride CP12 (CP12) mRNA, complete cds
          Length = 837

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 375 gacccgctcgaggagttctgcgaggacaaccccgagaccgacgagtgccg 424
           ||||| || ||| ||||||| || |||||||| ||||| |||||||||||
Sbjct: 364 gacccccttgagaagttctgtgaagacaaccctgagactgacgagtgccg 413



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 253     agcaggcggaggagacgtgcgc 274
               ||||||||||||||||||||||
Sbjct: 8626721 agcaggcggaggagacgtgcgc 8626742



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 305      ggcgtgggacgaggtggaggag 326
                ||||||||||||||||||||||
Sbjct: 25434253 ggcgtgggacgaggtggaggag 25434274



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 305      ggcgtgggacgaggtggaggag 326
                ||||||||||||||||||||||
Sbjct: 25443996 ggcgtgggacgaggtggaggag 25444017



to top

>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 300   gtggcggcgtgggacgaggtggagga 325
             |||||||||||||| |||||||||||
Sbjct: 40044 gtggcggcgtgggatgaggtggagga 40069



to top

>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 305   ggcgtgggacgaggtggaggag 326
             ||||||||||||||||||||||
Sbjct: 65569 ggcgtgggacgaggtggaggag 65590



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 305   ggcgtgggacgaggtggaggag 326
             ||||||||||||||||||||||
Sbjct: 75312 ggcgtgggacgaggtggaggag 75333



to top

>dbj|AK107793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D07, full
           insert sequence
          Length = 518

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 305 ggcgtgggacgaggtggaggag 326
           ||||||||||||||||||||||
Sbjct: 227 ggcgtgggacgaggtggaggag 248



to top

>emb|BX819584.1|CNS0A8ZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB91ZD01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 528

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 303 gcggcgtgggacgaggtggaggagct 328
           ||||| ||||||||||||||||||||
Sbjct: 231 gcggcttgggacgaggtggaggagct 256



to top

>emb|AJ005284.1|CRAJ5284 Chlamydomonas reinhardtii mRNA for Calvin cycle CP12 protein
           (partial)
          Length = 121

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 305 ggcgtgggacgaggtggaggagctcagcgc 334
           ||||||||| ||||||||||| ||||||||
Sbjct: 24  ggcgtgggatgaggtggaggaactcagcgc 53



to top

>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 125000

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 253   agcaggcggaggagacgtgcgc 274
             ||||||||||||||||||||||
Sbjct: 89468 agcaggcggaggagacgtgcgc 89489



to top

>ref|XM_001224794.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07139)
           mRNA, complete cds
          Length = 993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 cgaggtggaggagctcagcgc 334
           |||||||||||||||||||||
Sbjct: 723 cgaggtggaggagctcagcgc 743



to top

>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 51       gccaccatcaccaccatggcc 71
                |||||||||||||||||||||
Sbjct: 11632871 gccaccatcaccaccatggcc 11632891



to top

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 336     gcggccagccacgcgcgcgac 356
               |||||||||||||||||||||
Sbjct: 1726551 gcggccagccacgcgcgcgac 1726571



to top

>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
             complete sequence
          Length = 122768

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    ccaccttcctgcgaaccaagt 39
             |||||||||||||||||||||
Sbjct: 43061 ccaccttcctgcgaaccaagt 43081



to top

>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0020H14, complete sequence
          Length = 185623

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 302  ggcggcgtgggacgaggtggaggag 326
            ||||||||||||||||| |||||||
Sbjct: 5011 ggcggcgtgggacgaggaggaggag 5035



to top

>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
             complete sequence
          Length = 160142

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 302   ggcggcgtgggacgaggtggaggag 326
             ||||||||||||||||| |||||||
Sbjct: 44238 ggcggcgtgggacgaggaggaggag 44262



to top

>ref|XM_533419.2| PREDICTED: Canis familiaris similar to microtubule-associated protein
            7 (LOC476214), mRNA
          Length = 2621

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 221  ggagctggcgcagaaggtgacggag 245
            ||||||||||||||||||| |||||
Sbjct: 1605 ggagctggcgcagaaggtggcggag 1629



to top

>ref|XM_460776.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F10461g)
           partial mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 65  catggccttcatggccacctt 85
           |||||||||||||||||||||
Sbjct: 213 catggccttcatggccacctt 193



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 328     tcagcgccgcggccagccacg 348
               |||||||||||||||||||||
Sbjct: 5053684 tcagcgccgcggccagccacg 5053704



to top

>ref|XM_808113.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509911.120) partial mRNA
          Length = 4956

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  cccgagcgtcgtgtcgttcgc 154
            |||||||||||||||||||||
Sbjct: 3468 cccgagcgtcgtgtcgttcgc 3448



to top

>ref|XM_802796.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507389.30) partial mRNA
          Length = 4095

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 134  cccgagcgtcgtgtcgttcgc 154
            |||||||||||||||||||||
Sbjct: 3468 cccgagcgtcgtgtcgttcgc 3448



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 19      ccaccttcctgcgaaccaagt 39
               |||||||||||||||||||||
Sbjct: 1087450 ccaccttcctgcgaaccaagt 1087470



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 302      ggcggcgtgggacgaggtggaggag 326
                ||||||||||||||||| |||||||
Sbjct: 21451155 ggcggcgtgggacgaggaggaggag 21451179



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 195     gtggcgggctcgccgtccacg 215
               |||||||||||||||||||||
Sbjct: 1396989 gtggcgggctcgccgtccacg 1396969



to top

>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     catggccttcatggccacctt 85
              |||||||||||||||||||||
Sbjct: 834489 catggccttcatggccacctt 834469



to top

>emb|CR382342.5| Zebrafish DNA sequence from clone DKEY-208E17 in linkage group 14,
             complete sequence
          Length = 67870

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 538   aagtttggtttgttgctttat 558
             |||||||||||||||||||||
Sbjct: 62870 aagtttggtttgttgctttat 62890



to top

>gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, region 89A-89A, BAC clone
             BACR06B08, complete sequence
          Length = 151447

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    gccaccatcaccaccatggcc 71
             |||||||||||||||||||||
Sbjct: 51325 gccaccatcaccaccatggcc 51345



to top

>ref|XM_957719.1| Neurospora crassa OR74A hypothetical protein (NCU07879.1) partial
           mRNA
          Length = 1176

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 45  gccatggccaccatcaccaccatgg 69
           ||||||| |||||||||||||||||
Sbjct: 467 gccatggacaccatcaccaccatgg 491



to top

>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone
              BACR48G17, complete sequence
          Length = 179122

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 51     gccaccatcaccaccatggcc 71
              |||||||||||||||||||||
Sbjct: 162338 gccaccatcaccaccatggcc 162358


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 94,530,713
Number of extensions: 5225794
Number of successful extensions: 135293
Number of sequences better than 10.0: 70
Number of HSP's gapped: 135274
Number of HSP's successfully gapped: 88
Length of query: 679
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 657
Effective length of database: 18,508,616,841
Effective search space: 12160161264537
Effective search space used: 12160161264537
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top