| Clone Name | FLbaf176p17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052579.1| Oryza sativa (japonica cultivar-group) Os02g0173900 (Os02g0173900) mRNA, complete cds Length = 1815 Score = 894 bits (451), Expect = 0.0 Identities = 697/779 (89%) Strand = Plus / Plus Query: 53 agcgtggacgcgggcgcggcgatggagaagatccgggcggcggggctgctcaggacgcgc 112 |||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 183 agcgtggacgcgggggcggcgatggagaaggtacgggcggcggggctgctccggacgcag 242 Query: 113 ggcctcatcggcggcaagtgggtcgacgcctacgacgggaagaccatcgaggtgcaaaat 172 || |||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 243 gggctcatcggcggcaaatgggtggacgcctacgacggcaagaccatcgaggttcaaaat 302 Query: 173 ccagcaactggcgaggtccttgcaaatgtagcctgcatgggcaacagagaaacagctgat 232 ||||||||||| ||| ||||| ||||| |||| ||||||| || ||||||| ||||| Sbjct: 303 ccagcaactggagagactcttgccaatgtgtcctgtatgggcagcaaagaaacatctgat 362 Query: 233 gcaatagcttctgctcacactacattttatacttggagcaaactcactgcaagtgaaagg 292 ||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| ||| ||| Sbjct: 363 gcaatagcttcagctcacagtacattctattcttggagcaaactcactgcaaatgagagg 422 Query: 293 agcaaggcactaagaaaatggcatgacctacttatgtcacacaaggaagaacttgcgctt 352 |||||||| ||||||||||||||||| || |||| |||||||||||||||||||| ||| Sbjct: 423 agcaaggctctaagaaaatggcatgatttaattatctcacacaaggaagaacttgcactt 482 Query: 353 cttatgacactggaacaggggaagcctatgaaagaagcccttggggaggtgaactatggt 412 || ||||||||||| || ||||| ||||||||||| || |||| ||||| | |||||| Sbjct: 483 ctcatgacactggagcaagggaaacctatgaaagaggctcttgttgaggtcacatatggt 542 Query: 413 gcaagtttcatagaattttttgctgaggaagcaaagcgtgtgtatggtgatattattccc 472 |||||||| || |||| |||||||| |||||||||||| | |||||||||||||||||| Sbjct: 543 gcaagttttattgaatactttgctgaagaagcaaagcgtatatatggtgatattattccc 602 Query: 473 ccaactctagctgatcgcagactattggttctgaagcagcctattggggtagttggagct 532 ||||||||| ||||||| ||| |||||||| ||||||||||| |||| |||||||||||| Sbjct: 603 ccaactctatctgatcgtagattattggttttgaagcagcctgttggagtagttggagct 662 Query: 533 attacaccatggaattttcctttagcaatgataaccagaaaggttggaccagcattggct 592 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 663 gttacaccatggaattttcctttagcgatgataaccagaaaggttggaccagcattggct 722 Query: 593 tgtggatgcacagttgttgtcaagccatcagagttcacacctctgacagcattagctgca 652 ||||| ||||| || ||||||||||||||||||||||||||| |||||||| | |||||| Sbjct: 723 tgtggctgcactgtcgttgtcaagccatcagagttcacacctttgacagcacttgctgca 782 Query: 653 gcagaccttgctcttcaagctggaataccggctggtgtactaaatgttgtgatgggtaat 712 ||||| ||||||||||||||||||||||| ||||| | | |||||||||||||||||||| Sbjct: 783 gcagatcttgctcttcaagctggaataccagctggcgcaataaatgttgtgatgggtaat 842 Query: 713 gctcctgagataggtgatgaactaatgcagagcacacaggtcagaaagattacgttcacg 772 ||||||||||||||||||| ||| | ||||| |||||||||||||||||||| ||||| Sbjct: 843 gctcctgagataggtgatgctctactccagagtacacaggtcagaaagattacattcaca 902 Query: 773 ggttcaacagctgttggcaaaaaactgatggctggatcagcaaacaccgtgaaaaaggt 831 || ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 903 gggtcaacagctgttggcaaaaaactgatggctggatcagcaaatactgtgaagaaggt 961 Score = 472 bits (238), Expect = e-129 Identities = 457/530 (86%) Strand = Plus / Plus Query: 969 aagaaggtatctacgaaaaattcgcaagtgcatttgtcaaggctgttcagagcttgcaag 1028 |||||||||| || |||||||| |||||||| ||| |||||||||||||||| ||| | | Sbjct: 954 aagaaggtatttatgaaaaatttgcaagtgcgtttatcaaggctgttcagagtttgaagg 1013 Query: 1029 tcggtaatgggctagaagagagtacatcacagggtcctctaatcaatgaagctgccgttc 1088 | ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 1014 ttggtaatgggcttgaagagagtacatcacagggccctctgatcaatgaagctgctgttc 1073 Query: 1089 aaaaggtagagaagtttgtaggtgatgctacttcaaagggagccaacgtcatgctcggtg 1148 | |||||||||||||| || ||| || |||||||||||||| ||| ||||||| |||| Sbjct: 1074 agaaggtagagaagttcataaatgacgccacttcaaagggagcaaacatcatgcttggtg 1133 Query: 1149 gtaaaagacacagcctcgggatgaccttttatgagccaactgtggtagggaacgtaagca 1208 ||||||| |||||||| |||||| | || |||||||||||||| ||||||||||| |||| Sbjct: 1134 gtaaaaggcacagccttgggatgtcattctatgagccaactgtagtagggaacgtcagca 1193 Query: 1209 atgatatgcttcttttcagggaagaagtttttggtccagttgcaccacttataccattca 1268 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 1194 atgatatgcttcttttcagggaagaagtctttggtccagttgcaccacttgtaccattca 1253 Query: 1269 aaactgaggaggaagcaatccatctagcaaacgacaccaatgcaggcttagctgcataca 1328 |||||||||| || ||||||| | | || || || ||||| ||||||||||||||||| | Sbjct: 1254 aaactgaggaagatgcaatccgtatggccaatgataccaacgcaggcttagctgcatata 1313 Query: 1329 tgtttacaaagagcatagcccggtcatggcgtgtttccgaagctcttgagtacgggcttg 1388 | || |||||||||||| | || |||||||| ||||| ||||||||||| || || || | Sbjct: 1314 tcttcacaaagagcatacctcgttcatggcgcgtttcggaagctcttgaatatggactag 1373 Query: 1389 tcggtgtgaatgagggattgatttccacagaggtggcgccattcgttggggttaagcagt 1448 |||||||||| ||||| | || || |||||||| ||||| || | || || ||||| | Sbjct: 1374 tcggtgtgaacgaggggatcatctcaacagaggttgcgccgtttggcggcgtcaagcaat 1433 Query: 1449 ctggccttgggcgggaaggatcaaaatatggcatggatgacttcctggag 1498 ||||||||||| | |||||||||||||| |||||||| || | ||||||| Sbjct: 1434 ctggccttgggagagaaggatcaaaatacggcatggacgagtacctggag 1483
>dbj|AK060831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C05, full insert sequence Length = 1815 Score = 878 bits (443), Expect = 0.0 Identities = 695/779 (89%) Strand = Plus / Plus Query: 53 agcgtggacgcgggcgcggcgatggagaagatccgggcggcggggctgctcaggacgcgc 112 |||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 183 agcgtggacgcgggggcggcgatggagaaggtacgggcggcggggctgctccggacgcag 242 Query: 113 ggcctcatcggcggcaagtgggtcgacgcctacgacgggaagaccatcgaggtgcaaaat 172 || |||||||||| ||| ||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 243 gggctcatcggcgacaaatgggtggacgcctacgacggcaagaccatcgaggttcaaaat 302 Query: 173 ccagcaactggcgaggtccttgcaaatgtagcctgcatgggcaacagagaaacagctgat 232 ||||||||||| ||| ||||| ||||| |||| ||||||| || ||||||| ||||| Sbjct: 303 ccagcaactggagagactcttgccaatgtgtcctgtatgggcagcaaagaaacatctgat 362 Query: 233 gcaatagcttctgctcacactacattttatacttggagcaaactcactgcaagtgaaagg 292 ||||||||||| ||||||| |||||| || ||||||||||||||||||||| ||| ||| Sbjct: 363 gcaatagcttcagctcacagtacattctactcttggagcaaactcactgcaaatgagagg 422 Query: 293 agcaaggcactaagaaaatggcatgacctacttatgtcacacaaggaagaacttgcgctt 352 |||||||| ||||||||||||||||| || |||| |||||||||||||||||||| ||| Sbjct: 423 agcaaggctctaagaaaatggcatgatttaattatctcacacaaggaagaacttgcactt 482 Query: 353 cttatgacactggaacaggggaagcctatgaaagaagcccttggggaggtgaactatggt 412 || ||||||||||| || ||||| ||||||||||| || |||| ||||| | |||||| Sbjct: 483 ctcatgacactggagcaagggaaacctatgaaagaggctcttgttgaggtcacatatggt 542 Query: 413 gcaagtttcatagaattttttgctgaggaagcaaagcgtgtgtatggtgatattattccc 472 |||||||| || |||| |||||||| |||||||||||| | |||||||||||||||||| Sbjct: 543 gcaagttttattgaatactttgctgaagaagcaaagcgtatatatggtgatattattccc 602 Query: 473 ccaactctagctgatcgcagactattggttctgaagcagcctattggggtagttggagct 532 ||||||||| ||||||| ||| |||||||| ||||||||||| |||| |||||||||||| Sbjct: 603 ccaactctatctgatcgtagattattggttttgaagcagcctgttggagtagttggagct 662 Query: 533 attacaccatggaattttcctttagcaatgataaccagaaaggttggaccagcattggct 592 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 663 gttacaccatggaattttcctttagcgatgataaccagaaaggttggaccagcattggct 722 Query: 593 tgtggatgcacagttgttgtcaagccatcagagttcacacctctgacagcattagctgca 652 ||||| ||||| || ||||||||||||||||||||||||||| |||||||| | |||||| Sbjct: 723 tgtggctgcactgtcgttgtcaagccatcagagttcacacctttgacagcacttgctgca 782 Query: 653 gcagaccttgctcttcaagctggaataccggctggtgtactaaatgttgtgatgggtaat 712 ||||| ||||||||||||||||||||||| ||||| | | |||||||||||||||||||| Sbjct: 783 gcagatcttgctcttcaagctggaataccagctggcgcaataaatgttgtgatgggtaat 842 Query: 713 gctcctgagataggtgatgaactaatgcagagcacacaggtcagaaagattacgttcacg 772 ||||||||||||||||||| ||| | ||||| |||||||||||||||||||| ||||| Sbjct: 843 gctcctgagataggtgatgctctactccagagtacacaggtcagaaagattacattcaca 902 Query: 773 ggttcaacagctgttggcaaaaaactgatggctggatcagcaaacaccgtgaaaaaggt 831 || ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 903 gggtcaacagctgttggcaaaaaactgatggctggatcagcaaatactgtgaagaaggt 961 Score = 464 bits (234), Expect = e-127 Identities = 456/530 (86%) Strand = Plus / Plus Query: 969 aagaaggtatctacgaaaaattcgcaagtgcatttgtcaaggctgttcagagcttgcaag 1028 |||||||||| || |||||||| |||||||| ||| |||||||||||||||| ||| | | Sbjct: 954 aagaaggtatttatgaaaaatttgcaagtgcgtttatcaaggctgttcagagtttgaagg 1013 Query: 1029 tcggtaatgggctagaagagagtacatcacagggtcctctaatcaatgaagctgccgttc 1088 | ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 1014 ttggtaatgggcttgaagagagtacatcacagggccctctgatcaatgaagctgctgttc 1073 Query: 1089 aaaaggtagagaagtttgtaggtgatgctacttcaaagggagccaacgtcatgctcggtg 1148 | |||||||||||||| || ||| || |||||||||||||| ||| ||||||| |||| Sbjct: 1074 agaaggtagagaagttcataaatgacgccacttcaaagggagcaaacatcatgcttggtg 1133 Query: 1149 gtaaaagacacagcctcgggatgaccttttatgagccaactgtggtagggaacgtaagca 1208 ||||||| |||||||| |||||| | || |||||||||||||| ||||||||||| |||| Sbjct: 1134 gtaaaaggcacagccttgggatgtcattctatgagccaactgtagtagggaacgtcagca 1193 Query: 1209 atgatatgcttcttttcagggaagaagtttttggtccagttgcaccacttataccattca 1268 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 1194 atgatatgcttcttttcagggaagaagtctttggtccagttgcaccacttgtaccattca 1253 Query: 1269 aaactgaggaggaagcaatccatctagcaaacgacaccaatgcaggcttagctgcataca 1328 |||||||||| || ||||||| | | || || || ||||| ||||||||||| ||||| | Sbjct: 1254 aaactgaggaagatgcaatccgtatggccaatgataccaacgcaggcttagccgcatata 1313 Query: 1329 tgtttacaaagagcatagcccggtcatggcgtgtttccgaagctcttgagtacgggcttg 1388 | || |||||||||||| | || |||||||| ||||| ||||||||||| || || || | Sbjct: 1314 tcttcacaaagagcatacctcgttcatggcgcgtttcggaagctcttgaatatggactag 1373 Query: 1389 tcggtgtgaatgagggattgatttccacagaggtggcgccattcgttggggttaagcagt 1448 |||||||||| ||||| | || || |||||||| ||||| || | || || ||||| | Sbjct: 1374 tcggtgtgaacgaggggatcatctcaacagaggttgcgccgtttggcggcgtcaagcaat 1433 Query: 1449 ctggccttgggcgggaaggatcaaaatatggcatggatgacttcctggag 1498 ||||||||||| | |||||||||||||| |||||||| || | ||||||| Sbjct: 1434 ctggccttgggagagaaggatcaaaatacggcatggacgagtacctggag 1483
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 163 bits (82), Expect = 3e-36 Identities = 106/114 (92%) Strand = Plus / Plus Query: 573 aggttggaccagcattggcttgtggatgcacagttgttgtcaagccatcagagttcacac 632 ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 4047940 aggttggaccagcattggcttgtggctgcactgtcgttgtcaagccatcagagttcacac 4047999 Query: 633 ctctgacagcattagctgcagcagaccttgctcttcaagctggaataccggctg 686 || |||||||| | ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 4048000 ctttgacagcacttgctgcagcagatcttgctcttcaagctggaataccagctg 4048053 Score = 145 bits (73), Expect = 7e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 53 agcgtggacgcgggcgcggcgatggagaagatccgggcggcggggctgctcaggacgcgc 112 |||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 4044865 agcgtggacgcgggggcggcgatggagaaggtacgggcggcggggctgctccggacgcag 4044924 Query: 113 ggcctcatcggcggcaagtgggtcgacgcctacgacgggaagaccatcgaggt 165 || |||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 4044925 gggctcatcggcggcaaatgggtggacgcctacgacggcaagaccatcgaggt 4044977 Score = 127 bits (64), Expect = 2e-25 Identities = 76/80 (95%) Strand = Plus / Plus Query: 828 aggtttctttggagcttggtgggaatgcaccttgcattgttttcgatgatgcagatattg 887 |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 4049551 aggtttctttggagcttggtggcaatgcaccttgcattgtttttgatgatgcagacattg 4049610 Query: 888 atgttgccgttaaaggcagt 907 |||||||| ||||||||||| Sbjct: 4049611 atgttgccattaaaggcagt 4049630 Score = 127 bits (64), Expect = 2e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 1125 agggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttttatgagc 1184 ||||||| ||| ||||||| ||||||||||| |||||||| |||||| | || ||||||| Sbjct: 4050752 agggagcaaacatcatgcttggtggtaaaaggcacagccttgggatgtcattctatgagc 4050811 Query: 1185 caactgtggtagggaacgtaagcaatgatatgcttcttttcagg 1228 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 4050812 caactgtagtagggaacgtcagcaatgatatgcttcttttcagg 4050855 Score = 121 bits (61), Expect = 1e-23 Identities = 94/105 (89%) Strand = Plus / Plus Query: 407 tatggtgcaagtttcatagaattttttgctgaggaagcaaagcgtgtgtatggtgatatt 466 |||||||||||||| || |||| |||||||| |||||||||||| | |||||||||||| Sbjct: 4047257 tatggtgcaagttttattgaatactttgctgaagaagcaaagcgtatatatggtgatatt 4047316 Query: 467 attcccccaactctagctgatcgcagactattggttctgaagcag 511 ||||||||||||||| ||||||| ||| |||||||| |||||||| Sbjct: 4047317 attcccccaactctatctgatcgtagattattggttttgaagcag 4047361 Score = 115 bits (58), Expect = 6e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 750 aggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctggat 809 |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 4048687 aggtcagaaagattacattcacagggtcaacagctgttggcaaaaaactgatggctggat 4048746 Query: 810 cagcaaacaccgtgaaaaaggt 831 ||||||| || ||||| ||||| Sbjct: 4048747 cagcaaatactgtgaagaaggt 4048768 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 908 cttgctgccaagtttcggaacagtggacagacatgtgtatgtgcaaacaggatattggtg 967 |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4049784 cttgctgctaagttccgtaacagcggacagacatgtgtatgtgcaaacaggatattggtg 4049843 Query: 968 caagaaggta 977 |||||||||| Sbjct: 4049844 caagaaggta 4049853 Score = 103 bits (52), Expect = 2e-18 Identities = 64/68 (94%) Strand = Plus / Plus Query: 509 cagcctattggggtagttggagctattacaccatggaattttcctttagcaatgataacc 568 |||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 4047768 cagcctgttggagtagttggagctgttacaccatggaattttcctttagcgatgataacc 4047827 Query: 569 agaaaggt 576 |||||||| Sbjct: 4047828 agaaaggt 4047835 Score = 101 bits (51), Expect = 9e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1223 ttcagggaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaa 1282 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 4050981 ttcagggaagaagtctttggtccagttgcaccacttgtaccattcaaaactgaggaagat 4051040 Query: 1283 gcaatcc 1289 ||||||| Sbjct: 4051041 gcaatcc 4051047 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 973 aggtatctacgaaaaattcgcaagtgcatttgtcaaggctgttcagagcttgcaagtcgg 1032 |||||| || |||||||| |||||||| ||| |||||||||||||||| ||| | || || Sbjct: 4049928 aggtatttatgaaaaatttgcaagtgcgtttatcaaggctgttcagagtttgaaggttgg 4049987 Query: 1033 taatgggctagaagagagtacatcacagg 1061 ||||||||| ||||||||||||||||||| Sbjct: 4049988 taatgggcttgaagagagtacatcacagg 4050016 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 |||||||||||||||||| || || |||||||||||| | || |||||||| ||||| || Sbjct: 4051473 tgcaggcttagctgcatatatcttcacaaagagcatacctcgttcatggcgcgtttcgga 4051532 Query: 1369 agctcttgagtacgggcttgtcggtgtgaatgaggg 1404 ||||||||| || || || ||||||||||| ||||| Sbjct: 4051533 agctcttgaatatggactagtcggtgtgaacgaggg 4051568 Score = 81.8 bits (41), Expect = 8e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 162 aggtgcaaaatccagcaactggcgaggtccttgcaaatgtagcctgcatgggcaacagag 221 |||| ||||||||||||||||| ||| ||||| ||||| |||| ||||||| || || Sbjct: 4045816 aggttcaaaatccagcaactggagagactcttgccaatgtgtcctgtatgggcagcaaag 4045875 Query: 222 aaacagctgatgcaatagcttctgctcacactacatt 258 ||||| |||||||||||||||| ||||||| |||||| Sbjct: 4045876 aaacatctgatgcaatagcttcagctcacagtacatt 4045912 Score = 81.8 bits (41), Expect = 8e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 693 taaatgttgtgatgggtaatgctcctgagataggtgatgaactaatgcagagcacacagg 752 ||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||| Sbjct: 4048524 taaatgttgtgatgggtaatgctcctgagataggtgatgctctactccagagtacacagg 4048583 Query: 753 t 753 | Sbjct: 4048584 t 4048584 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 324 ttatgtcacacaaggaagaacttgcgcttcttatgacactggaacaggggaagcctatga 383 |||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 4047082 ttatctcacacaaggaagaacttgcacttctcatgacactggagcaagggaaacctatga 4047141 Query: 384 aaga 387 |||| Sbjct: 4047142 aaga 4047145 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 264 cttggagcaaactcactgcaagtgaaaggagcaaggcactaagaaaatgg 313 ||||||||||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 4046923 cttggagcaaactcactgcaaatgagaggagcaaggctctaagaaaatgg 4046972 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcatggatgacttcctggag 1498 ||||| |||||||||||| | |||||||||||||| |||||||| || | ||||||| Sbjct: 4051704 aagcaatctggccttgggagagaaggatcaaaatacggcatggacgagtacctggag 4051760 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggta 1096 ||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 4050298 cagggccctctgatcaatgaagctgctgttcagaaggta 4050336
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 163 bits (82), Expect = 3e-36 Identities = 106/114 (92%) Strand = Plus / Plus Query: 573 aggttggaccagcattggcttgtggatgcacagttgttgtcaagccatcagagttcacac 632 ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 94606 aggttggaccagcattggcttgtggctgcactgtcgttgtcaagccatcagagttcacac 94665 Query: 633 ctctgacagcattagctgcagcagaccttgctcttcaagctggaataccggctg 686 || |||||||| | ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 94666 ctttgacagcacttgctgcagcagatcttgctcttcaagctggaataccagctg 94719 Score = 145 bits (73), Expect = 7e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 53 agcgtggacgcgggcgcggcgatggagaagatccgggcggcggggctgctcaggacgcgc 112 |||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 91531 agcgtggacgcgggggcggcgatggagaaggtacgggcggcggggctgctccggacgcag 91590 Query: 113 ggcctcatcggcggcaagtgggtcgacgcctacgacgggaagaccatcgaggt 165 || |||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 91591 gggctcatcggcggcaaatgggtggacgcctacgacggcaagaccatcgaggt 91643 Score = 127 bits (64), Expect = 2e-25 Identities = 76/80 (95%) Strand = Plus / Plus Query: 828 aggtttctttggagcttggtgggaatgcaccttgcattgttttcgatgatgcagatattg 887 |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 96217 aggtttctttggagcttggtggcaatgcaccttgcattgtttttgatgatgcagacattg 96276 Query: 888 atgttgccgttaaaggcagt 907 |||||||| ||||||||||| Sbjct: 96277 atgttgccattaaaggcagt 96296 Score = 127 bits (64), Expect = 2e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 1125 agggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttttatgagc 1184 ||||||| ||| ||||||| ||||||||||| |||||||| |||||| | || ||||||| Sbjct: 97418 agggagcaaacatcatgcttggtggtaaaaggcacagccttgggatgtcattctatgagc 97477 Query: 1185 caactgtggtagggaacgtaagcaatgatatgcttcttttcagg 1228 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 97478 caactgtagtagggaacgtcagcaatgatatgcttcttttcagg 97521 Score = 121 bits (61), Expect = 1e-23 Identities = 94/105 (89%) Strand = Plus / Plus Query: 407 tatggtgcaagtttcatagaattttttgctgaggaagcaaagcgtgtgtatggtgatatt 466 |||||||||||||| || |||| |||||||| |||||||||||| | |||||||||||| Sbjct: 93923 tatggtgcaagttttattgaatactttgctgaagaagcaaagcgtatatatggtgatatt 93982 Query: 467 attcccccaactctagctgatcgcagactattggttctgaagcag 511 ||||||||||||||| ||||||| ||| |||||||| |||||||| Sbjct: 93983 attcccccaactctatctgatcgtagattattggttttgaagcag 94027 Score = 115 bits (58), Expect = 6e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 750 aggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctggat 809 |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 95353 aggtcagaaagattacattcacagggtcaacagctgttggcaaaaaactgatggctggat 95412 Query: 810 cagcaaacaccgtgaaaaaggt 831 ||||||| || ||||| ||||| Sbjct: 95413 cagcaaatactgtgaagaaggt 95434 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 908 cttgctgccaagtttcggaacagtggacagacatgtgtatgtgcaaacaggatattggtg 967 |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 96450 cttgctgctaagttccgtaacagcggacagacatgtgtatgtgcaaacaggatattggtg 96509 Query: 968 caagaaggta 977 |||||||||| Sbjct: 96510 caagaaggta 96519 Score = 103 bits (52), Expect = 2e-18 Identities = 64/68 (94%) Strand = Plus / Plus Query: 509 cagcctattggggtagttggagctattacaccatggaattttcctttagcaatgataacc 568 |||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 94434 cagcctgttggagtagttggagctgttacaccatggaattttcctttagcgatgataacc 94493 Query: 569 agaaaggt 576 |||||||| Sbjct: 94494 agaaaggt 94501 Score = 101 bits (51), Expect = 9e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1223 ttcagggaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaa 1282 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 97647 ttcagggaagaagtctttggtccagttgcaccacttgtaccattcaaaactgaggaagat 97706 Query: 1283 gcaatcc 1289 ||||||| Sbjct: 97707 gcaatcc 97713 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 973 aggtatctacgaaaaattcgcaagtgcatttgtcaaggctgttcagagcttgcaagtcgg 1032 |||||| || |||||||| |||||||| ||| |||||||||||||||| ||| | || || Sbjct: 96594 aggtatttatgaaaaatttgcaagtgcgtttatcaaggctgttcagagtttgaaggttgg 96653 Query: 1033 taatgggctagaagagagtacatcacagg 1061 ||||||||| ||||||||||||||||||| Sbjct: 96654 taatgggcttgaagagagtacatcacagg 96682 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 |||||||||||||||||| || || |||||||||||| | || |||||||| ||||| || Sbjct: 98139 tgcaggcttagctgcatatatcttcacaaagagcatacctcgttcatggcgcgtttcgga 98198 Query: 1369 agctcttgagtacgggcttgtcggtgtgaatgaggg 1404 ||||||||| || || || ||||||||||| ||||| Sbjct: 98199 agctcttgaatatggactagtcggtgtgaacgaggg 98234 Score = 81.8 bits (41), Expect = 8e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 162 aggtgcaaaatccagcaactggcgaggtccttgcaaatgtagcctgcatgggcaacagag 221 |||| ||||||||||||||||| ||| ||||| ||||| |||| ||||||| || || Sbjct: 92482 aggttcaaaatccagcaactggagagactcttgccaatgtgtcctgtatgggcagcaaag 92541 Query: 222 aaacagctgatgcaatagcttctgctcacactacatt 258 ||||| |||||||||||||||| ||||||| |||||| Sbjct: 92542 aaacatctgatgcaatagcttcagctcacagtacatt 92578 Score = 81.8 bits (41), Expect = 8e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 693 taaatgttgtgatgggtaatgctcctgagataggtgatgaactaatgcagagcacacagg 752 ||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||| Sbjct: 95190 taaatgttgtgatgggtaatgctcctgagataggtgatgctctactccagagtacacagg 95249 Query: 753 t 753 | Sbjct: 95250 t 95250 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 324 ttatgtcacacaaggaagaacttgcgcttcttatgacactggaacaggggaagcctatga 383 |||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 93748 ttatctcacacaaggaagaacttgcacttctcatgacactggagcaagggaaacctatga 93807 Query: 384 aaga 387 |||| Sbjct: 93808 aaga 93811 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 264 cttggagcaaactcactgcaagtgaaaggagcaaggcactaagaaaatgg 313 ||||||||||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 93589 cttggagcaaactcactgcaaatgagaggagcaaggctctaagaaaatgg 93638 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcatggatgacttcctggag 1498 ||||| |||||||||||| | |||||||||||||| |||||||| || | ||||||| Sbjct: 98370 aagcaatctggccttgggagagaaggatcaaaatacggcatggacgagtacctggag 98426 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggta 1096 ||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 96964 cagggccctctgatcaatgaagctgctgttcagaaggta 97002
>gb|AY110284.1| Zea mays CL28473_1 mRNA sequence Length = 594 Score = 135 bits (68), Expect = 6e-28 Identities = 230/284 (80%) Strand = Plus / Minus Query: 1248 ttgcaccacttataccattcaaaactgaggaggaagcaatccatctagcaaacgacacca 1307 ||||||| |||||||| |||||||||||||| |||||| ||||| | || ||||| || | Sbjct: 491 ttgcaccccttataccgttcaaaactgaggaagaagcagtccatatggccaacgatacaa 432 Query: 1308 atgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccg 1367 | |||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || | Sbjct: 431 acgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctg 372 Query: 1368 aagctcttgagtacgggcttgtcggtgtgaatgagggattgatttccacagaggtggcgc 1427 || ||||||||||||| | || || || || ||||| | ||||| || |||||||||| Sbjct: 371 aatctcttgagtacggcttagttggggtaaacgaggggattatttcaacggaggtggcgc 312 Query: 1428 cattcgttggggttaagcagtctggccttgggcgggaaggatcaaaatatggcatggatg 1487 |||| | || || ||||||||||| || ||| | |||||||| || || ||||| || | Sbjct: 311 catttggcggagtaaagcagtctggtctagggagagaaggatcgaagtacggcattgacg 252 Query: 1488 acttcctggagattaagtatgtatgcatgggcagcctgggttga 1531 | | | ||||| | ||||| | |||||||||| | |||||||| Sbjct: 251 agtacttggagctcaagtacatctgcatgggcaacttgggttga 208 Score = 46.1 bits (23), Expect = 0.46 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 1145 ggtggtaaaagacacagcctcgggatgaccttttatgagccaactgt 1191 ||||||||||||| | |||| || ||| ||||||||||||||||||| Sbjct: 593 ggtggtaaaagaccc-gcctgggaatgtccttttatgagccaactgt 548
>gb|DQ427974.1| Sorghum propinquum locus pHER5A08 genomic sequence Length = 835 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 181 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 240 Query: 1289 cat 1291 ||| Sbjct: 241 cat 243 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 583 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 642 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 643 atctcttgaatacgg 657
>gb|DQ427973.1| Sorghum bicolor voucher PI585454 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427972.1| Sorghum bicolor voucher PI267539b locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427971.1| Sorghum bicolor voucher PI267539a locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427970.1| Sorghum bicolor voucher PI267408 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427969.1| Sorghum bicolor voucher PI221607 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427968.1| Sorghum bicolor voucher PI152702 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427967.1| Sorghum bicolor voucher NSL92371 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427966.1| Sorghum bicolor voucher NSL87902b locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427965.1| Sorghum bicolor voucher NSL87902a locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427964.1| Sorghum bicolor voucher NSL87666 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427963.1| Sorghum bicolor voucher NSL77217 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427962.1| Sorghum bicolor voucher NSL77034 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427961.1| Sorghum bicolor voucher NSL56174 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427960.1| Sorghum bicolor voucher NSL56003 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427959.1| Sorghum bicolor voucher NSL55243 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427958.1| Sorghum bicolor voucher NSL51365 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427957.1| Sorghum bicolor voucher NSL51030 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427956.1| Sorghum bicolor voucher NSL50875 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|DQ427955.1| Sorghum bicolor voucher BTx623 locus pHER5A08 genomic sequence Length = 799 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagttgcaccacttataccattcaaaactgaggaggaagcaatc 1288 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct: 145 gaagaagtttttggtccagttgcaccccttataccattcaaaactgaggaagaagcagtc 204 Query: 1289 cat 1291 ||| Sbjct: 205 cat 207 Score = 77.8 bits (39), Expect = 1e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1309 tgcaggcttagctgcatacatgtttacaaagagcatagcccggtcatggcgtgtttccga 1368 ||||||||||||||||||||| ||||| ||||||||| | || ||||||||||| || || Sbjct: 547 tgcaggcttagctgcatacatatttaccaagagcatacctcgttcatggcgtgtatctga 606 Query: 1369 agctcttgagtacgg 1383 | ||||||| ||||| Sbjct: 607 atctcttgaatacgg 621
>gb|BC124570.1| Xenopus tropicalis cDNA clone IMAGE:7656551 Length = 4001 Score = 61.9 bits (31), Expect = 8e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcatggatga 1488 |||||||||||| |||| |||||||| |||||||||||||| ||||| Sbjct: 2005 aagcagtctggcattggtcgggaagggtcaaaatatggcattgatga 2051
>gb|BT013982.1| Lycopersicon esculentum clone 133027F, mRNA sequence Length = 1838 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 1064 cctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgctacttca 1123 ||||||||||||||||| || || || ||||| || | ||||| | ||| ||||||||| Sbjct: 1259 cctctaatcaatgaagcagcagtacagaaggttgaatattttgtggatgaagctacttca 1318 Query: 1124 aagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgac 1173 ||||||||||| ||| | | ||||| || ||||||||||| || ||||| Sbjct: 1319 aagggagccaaagtccttgttggtgggaagagacacagccttggcatgac 1368 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 932 ggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaaaattc 991 ||||| |||||||||||||| ||||| ||| | ||||||||||| || || || |||||| Sbjct: 1127 ggacaaacatgtgtatgtgcgaacagaatacttgtgcaagaagggatatatgataaattc 1186 Query: 992 gcaagtgcatttg 1004 |||| ||| |||| Sbjct: 1187 gcaaatgcttttg 1199 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 524 gttggagctattacaccatggaattttcctttagcaatgataaccagaaaggttggacca 583 ||||| || ||||| |||||||||||||| || || ||||| ||| |||||||||| || Sbjct: 719 gttggtgcaattaccccatggaattttcccttggctatgattacccgaaaggttggccct 778 Query: 584 gcattggcttgtggatgcacagt 606 || | |||||||| |||||||| Sbjct: 779 gctcttgcttgtggttgcacagt 801
>gb|AC182660.2| Populus trichocarpa clone Pop1-125N19, complete sequence Length = 99621 Score = 58.0 bits (29), Expect = 1e-04 Identities = 62/73 (84%) Strand = Plus / Minus Query: 1352 tcatggcgtgtttccgaagctcttgagtacgggcttgtcggtgtgaatgagggattgatt 1411 ||||||||||| | |||||||||||||| || ||||| ||||| ||||| ||| | ||| Sbjct: 49050 tcatggcgtgtcactgaagctcttgagtatggacttgttggtgtcaatgaaggacttatt 48991 Query: 1412 tccacagaggtgg 1424 || |||||||||| Sbjct: 48990 tcaacagaggtgg 48978 Score = 56.0 bits (28), Expect = 5e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 908 cttgctgccaagtttcggaacagtggacagacatgtgtatgtgcaaacaggatattggtg 967 ||||| || ||||| || || |||||||| |||||||| ||||||||||| ||| | ||| Sbjct: 52037 cttgcagcgaagttccgtaatagtggacaaacatgtgtttgtgcaaacagaataattgtg 51978 Query: 968 caagaaggtatc 979 ||||| |||||| Sbjct: 51977 caagagggtatc 51966 Score = 48.1 bits (24), Expect = 0.12 Identities = 75/92 (81%) Strand = Plus / Minus Query: 590 gcttgtggatgcacagttgttgtcaagccatcagagttcacacctctgacagcattagct 649 |||||||| || ||||||||| | || || || || |||||||||| ||||| ||||| Sbjct: 53838 gcttgtggttgtacagttgttttaaaaccctctgaactcacacctctcacagctttagca 53779 Query: 650 gcagcagaccttgctcttcaagctggaatacc 681 ||||| || | || ||||||||||||||||| Sbjct: 53778 gcagctgagttggcccttcaagctggaatacc 53747
>ref|NM_106592.2| Arabidopsis thaliana ALDH5F1 (SUCCINIC SEMIALDEHYDE DEHYDROGENASE); aldehyde dehydrogenase (ALDH5F1) mRNA, complete cds Length = 1959 Score = 56.0 bits (28), Expect = 5e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 437 gaggaagcaaagcgtgtgtatggtgatattattcccccaactctagctgatcgcagacta 496 ||||| ||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| Sbjct: 544 gaggaggcaaaacgtgtatatggtgatataattcctccgaatctgtctgatcgccgactg 603 Query: 497 ttggttctgaagcagcctattggggtagttggagctattacaccatggaattttccttta 556 |||||||| || |||||| | || || ||||| || ||||| || ||||| || || ||| Sbjct: 604 ttggttctaaaacagcctgtcggtgttgttggtgcaattaccccttggaacttcccctta 663 Query: 557 gcaatgat 564 || ||||| Sbjct: 664 gccatgat 671 Score = 56.0 bits (28), Expect = 5e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 1415 acagaggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaa 1474 ||||||||||| ||||||| || || ||||||||||| ||||| |||||||||| || Sbjct: 1522 acagaggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaag 1581 Query: 1475 tatggcatggatgacttcctggagattaagtatgtatgcatggg 1518 ||||| ||||| || | ||| ||||| || || |||||| |||| Sbjct: 1582 tatggtatggacgaataccttgagatcaaatacgtatgcttggg 1625 Score = 48.1 bits (24), Expect = 0.12 Identities = 189/244 (77%) Strand = Plus / Plus Query: 747 cacaggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctg 806 ||||||| ||||| || ||||||||||| |||||||| ||||| || || ||||||| | Sbjct: 854 cacaggtgagaaaaatcacgttcacgggatcaacagcagttgggaagaagttgatggcag 913 Query: 807 gatcagcaaacaccgtgaaaaaggtttctttggagcttggtgggaatgcaccttgcattg 866 | ||| ||||| || ||||||||| | || ||||| || || ||||| | || | Sbjct: 914 ctgctgcacctaccgtcaagaaggtttctctagaacttggcggcaacgcaccctctatag 973 Query: 867 ttttcgatgatgcagatattgatgttgccgttaaaggcagtcttgctgccaagtttcgga 926 | || ||||||||||| | ||||| || || ||||| | ||||| || || ||| ||| Sbjct: 974 tatttgatgatgcagacctggatgtagctgtaaaaggaacgcttgcagcgaaatttagga 1033 Query: 927 acagtggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaa 986 | ||||| ||||||||||| ||||| ||||| || | |||||||| |||||||| || | Sbjct: 1034 atagtggtcagacatgtgtttgtgcgaacagagtacttgtgcaagatggtatctatgata 1093 Query: 987 aatt 990 |||| Sbjct: 1094 aatt 1097 Score = 44.1 bits (22), Expect = 1.8 Identities = 106/134 (79%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgct 1117 |||||||| || || ||||| || || || ||||||||||||| |||||| |||||| Sbjct: 1165 cagggtccacttataaatgatgcagcagtgcaaaaggtagagacatttgtacaagatgct 1224 Query: 1118 acttcaaagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttt 1177 ||| |||||||| || |||| | ||||| ||||| ||||| || |||||||| || Sbjct: 1225 gtttctaagggagcaaaaatcatcattggtggcaaaaggcacagtctagggatgactttc 1284 Query: 1178 tatgagccaactgt 1191 |||||||| ||||| Sbjct: 1285 tatgagcctactgt 1298
>gb|AF117335.1| Arabidopsis thaliana succinic semialdehyde dehydrogenase mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1710 Score = 56.0 bits (28), Expect = 5e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 437 gaggaagcaaagcgtgtgtatggtgatattattcccccaactctagctgatcgcagacta 496 ||||| ||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| Sbjct: 544 gaggaggcaaaacgtgtatatggtgatataattcctccgaatctgtctgatcgccgactg 603 Query: 497 ttggttctgaagcagcctattggggtagttggagctattacaccatggaattttccttta 556 |||||||| || |||||| | || || ||||| || ||||| || ||||| || || ||| Sbjct: 604 ttggttctaaaacagcctgtcggtgttgttggtgcaattaccccttggaacttcccctta 663 Query: 557 gcaatgat 564 || ||||| Sbjct: 664 gccatgat 671 Score = 56.0 bits (28), Expect = 5e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 1415 acagaggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaa 1474 ||||||||||| ||||||| || || ||||||||||| ||||| |||||||||| || Sbjct: 1522 acagaggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaag 1581 Query: 1475 tatggcatggatgacttcctggagattaagtatgtatgcatggg 1518 ||||| ||||| || | ||| ||||| || || |||||| |||| Sbjct: 1582 tatggtatggacgaataccttgagatcaaatacgtatgcttggg 1625 Score = 48.1 bits (24), Expect = 0.12 Identities = 189/244 (77%) Strand = Plus / Plus Query: 747 cacaggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctg 806 ||||||| ||||| || ||||||||||| |||||||| ||||| || || ||||||| | Sbjct: 854 cacaggtgagaaaaatcacgttcacgggatcaacagcagttgggaagaagttgatggcag 913 Query: 807 gatcagcaaacaccgtgaaaaaggtttctttggagcttggtgggaatgcaccttgcattg 866 | ||| ||||| || ||||||||| | || ||||| || || ||||| | || | Sbjct: 914 ctgctgcacctaccgtcaagaaggtttctctagaacttggcggcaacgcaccctctatag 973 Query: 867 ttttcgatgatgcagatattgatgttgccgttaaaggcagtcttgctgccaagtttcgga 926 | || ||||||||||| | ||||| || || ||||| | ||||| || || ||| ||| Sbjct: 974 tatttgatgatgcagacctggatgtagctgtaaaaggaacgcttgcagcgaaatttagga 1033 Query: 927 acagtggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaa 986 | ||||| ||||||||||| ||||| ||||| || | |||||||| |||||||| || | Sbjct: 1034 atagtggtcagacatgtgtttgtgcgaacagagtacttgtgcaagatggtatctatgata 1093 Query: 987 aatt 990 |||| Sbjct: 1094 aatt 1097 Score = 44.1 bits (22), Expect = 1.8 Identities = 106/134 (79%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgct 1117 |||||||| || || ||||| || || || ||||||||||||| |||||| |||||| Sbjct: 1165 cagggtccacttataaatgatgcagcagtgcaaaaggtagagacatttgtacaagatgct 1224 Query: 1118 acttcaaagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttt 1177 ||| |||||||| || |||| | ||||| ||||| ||||| || |||||||| || Sbjct: 1225 gtttctaagggagcaaaaatcatcattggtggcaaaaggcacagtctagggatgactttc 1284 Query: 1178 tatgagccaactgt 1191 |||||||| ||||| Sbjct: 1285 tatgagcctactgt 1298
>gb|AY056147.1| Arabidopsis thaliana putative succinic semialdehyde dehydrogenase gabD (At1g79440) mRNA, complete cds Length = 1861 Score = 56.0 bits (28), Expect = 5e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 437 gaggaagcaaagcgtgtgtatggtgatattattcccccaactctagctgatcgcagacta 496 ||||| ||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| Sbjct: 532 gaggaggcaaaacgtgtatatggtgatataattcctccgaatctgtctgatcgccgactg 591 Query: 497 ttggttctgaagcagcctattggggtagttggagctattacaccatggaattttccttta 556 |||||||| || |||||| | || || ||||| || ||||| || ||||| || || ||| Sbjct: 592 ttggttctaaaacagcctgtcggtgttgttggtgcaattaccccttggaacttcccctta 651 Query: 557 gcaatgat 564 || ||||| Sbjct: 652 gccatgat 659 Score = 56.0 bits (28), Expect = 5e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 1415 acagaggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaa 1474 ||||||||||| ||||||| || || ||||||||||| ||||| |||||||||| || Sbjct: 1510 acagaggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaag 1569 Query: 1475 tatggcatggatgacttcctggagattaagtatgtatgcatggg 1518 ||||| ||||| || | ||| ||||| || || |||||| |||| Sbjct: 1570 tatggtatggacgaataccttgagatcaaatacgtatgcttggg 1613 Score = 48.1 bits (24), Expect = 0.12 Identities = 189/244 (77%) Strand = Plus / Plus Query: 747 cacaggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctg 806 ||||||| ||||| || ||||||||||| |||||||| ||||| || || ||||||| | Sbjct: 842 cacaggtgagaaaaatcacgttcacgggatcaacagcagttgggaagaagttgatggcag 901 Query: 807 gatcagcaaacaccgtgaaaaaggtttctttggagcttggtgggaatgcaccttgcattg 866 | ||| ||||| || ||||||||| | || ||||| || || ||||| | || | Sbjct: 902 ctgctgcacctaccgtcaagaaggtttctctagaacttggcggcaacgcaccctctatag 961 Query: 867 ttttcgatgatgcagatattgatgttgccgttaaaggcagtcttgctgccaagtttcgga 926 | || ||||||||||| | ||||| || || ||||| | ||||| || || ||| ||| Sbjct: 962 tatttgatgatgcagacctggatgtagctgtaaaaggaacgcttgcagcgaaatttagga 1021 Query: 927 acagtggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaa 986 | ||||| ||||||||||| ||||| ||||| || | |||||||| |||||||| || | Sbjct: 1022 atagtggtcagacatgtgtttgtgcgaacagagtacttgtgcaagatggtatctatgata 1081 Query: 987 aatt 990 |||| Sbjct: 1082 aatt 1085 Score = 44.1 bits (22), Expect = 1.8 Identities = 106/134 (79%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgct 1117 |||||||| || || ||||| || || || ||||||||||||| |||||| |||||| Sbjct: 1153 cagggtccacttataaatgatgcagcagtgcaaaaggtagagacatttgtacaagatgct 1212 Query: 1118 acttcaaagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttt 1177 ||| |||||||| || |||| | ||||| ||||| ||||| || |||||||| || Sbjct: 1213 gtttctaagggagcaaaaatcatcattggtggcaaaaggcacagtctagggatgactttc 1272 Query: 1178 tatgagccaactgt 1191 |||||||| ||||| Sbjct: 1273 tatgagcctactgt 1286
>gb|AF428367.1|AF428367 Arabidopsis thaliana At1g79440/T8K14_14 mRNA, complete cds Length = 1790 Score = 56.0 bits (28), Expect = 5e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 437 gaggaagcaaagcgtgtgtatggtgatattattcccccaactctagctgatcgcagacta 496 ||||| ||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| Sbjct: 546 gaggaggcaaaacgtgtatatggtgatataattcctccgaatctgtctgatcgccgactg 605 Query: 497 ttggttctgaagcagcctattggggtagttggagctattacaccatggaattttccttta 556 |||||||| || |||||| | || || ||||| || ||||| || ||||| || || ||| Sbjct: 606 ttggttctaaaacagcctgtcggtgttgttggtgcaattaccccttggaacttcccctta 665 Query: 557 gcaatgat 564 || ||||| Sbjct: 666 gccatgat 673 Score = 56.0 bits (28), Expect = 5e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 1415 acagaggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaa 1474 ||||||||||| ||||||| || || ||||||||||| ||||| |||||||||| || Sbjct: 1524 acagaggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaag 1583 Query: 1475 tatggcatggatgacttcctggagattaagtatgtatgcatggg 1518 ||||| ||||| || | ||| ||||| || || |||||| |||| Sbjct: 1584 tatggtatggacgaataccttgagatcaaatacgtatgcttggg 1627 Score = 48.1 bits (24), Expect = 0.12 Identities = 189/244 (77%) Strand = Plus / Plus Query: 747 cacaggtcagaaagattacgttcacgggttcaacagctgttggcaaaaaactgatggctg 806 ||||||| ||||| || ||||||||||| |||||||| ||||| || || ||||||| | Sbjct: 856 cacaggtgagaaaaatcacgttcacgggatcaacagcagttgggaagaagttgatggcag 915 Query: 807 gatcagcaaacaccgtgaaaaaggtttctttggagcttggtgggaatgcaccttgcattg 866 | ||| ||||| || ||||||||| | || ||||| || || ||||| | || | Sbjct: 916 ctgctgcacctaccgtcaagaaggtttctctagaacttggcggcaacgcaccctctatag 975 Query: 867 ttttcgatgatgcagatattgatgttgccgttaaaggcagtcttgctgccaagtttcgga 926 | || ||||||||||| | ||||| || || ||||| | ||||| || || ||| ||| Sbjct: 976 tatttgatgatgcagacctggatgtagctgtaaaaggaacgcttgcagcgaaatttagga 1035 Query: 927 acagtggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaa 986 | ||||| ||||||||||| ||||| ||||| || | |||||||| |||||||| || | Sbjct: 1036 atagtggtcagacatgtgtttgtgcgaacagagtacttgtgcaagatggtatctatgata 1095 Query: 987 aatt 990 |||| Sbjct: 1096 aatt 1099 Score = 44.1 bits (22), Expect = 1.8 Identities = 106/134 (79%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgct 1117 |||||||| || || ||||| || || || ||||||||||||| |||||| |||||| Sbjct: 1167 cagggtccacttataaatgatgcagcagtgcaaaaggtagagacatttgtacaagatgct 1226 Query: 1118 acttcaaagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttt 1177 ||| |||||||| || |||| | ||||| ||||| ||||| || |||||||| || Sbjct: 1227 gtttctaagggagcaaaaatcatcattggtggcaaaaggcacagtctagggatgactttc 1286 Query: 1178 tatgagccaactgt 1191 |||||||| ||||| Sbjct: 1287 tatgagcctactgt 1300
>emb|BX815530.1|CNS0AE1Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1907 Score = 56.0 bits (28), Expect = 5e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 1415 acagaggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaa 1474 ||||||||||| ||||||| || || ||||||||||| ||||| |||||||||| || Sbjct: 1495 acagaggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaag 1554 Query: 1475 tatggcatggatgacttcctggagattaagtatgtatgcatggg 1518 ||||| ||||| || | ||| ||||| || || |||||| |||| Sbjct: 1555 tatggtatggacgaataccttgagatcaaatacgtatgcttggg 1598 Score = 46.1 bits (23), Expect = 0.46 Identities = 95/119 (79%) Strand = Plus / Plus Query: 872 gatgatgcagatattgatgttgccgttaaaggcagtcttgctgccaagtttcggaacagt 931 ||||||||||| | ||||| || || ||||| | ||||| || || ||| |||| ||| Sbjct: 952 gatgatgcagacctggatgtagctgtaaaaggaacgcttgcagcgaaatttaggaatagt 1011 Query: 932 ggacagacatgtgtatgtgcaaacaggatattggtgcaagaaggtatctacgaaaaatt 990 || ||||||||||| ||||| ||||| || | |||||||| |||||||| || ||||| Sbjct: 1012 ggtcagacatgtgtttgtgcgaacagagtacttgtgcaagatggtatctatgataaatt 1070 Score = 44.1 bits (22), Expect = 1.8 Identities = 55/66 (83%) Strand = Plus / Plus Query: 449 cgtgtgtatggtgatattattcccccaactctagctgatcgcagactattggttctgaag 508 ||||| ||||||||||| ||||| || | ||| |||||||| |||| |||||||| || Sbjct: 535 cgtgtatatggtgatataattcctccgaatctgtctgatcgccgactgttggttctaaaa 594 Query: 509 cagcct 514 |||||| Sbjct: 595 cagcct 600 Score = 44.1 bits (22), Expect = 1.8 Identities = 106/134 (79%) Strand = Plus / Plus Query: 1058 cagggtcctctaatcaatgaagctgccgttcaaaaggtagagaagtttgtaggtgatgct 1117 |||||||| || || ||||| || || || ||||||||||||| |||||| |||||| Sbjct: 1138 cagggtccacttataaatgatgcagcagtgcaaaaggtagagacatttgtacaagatgct 1197 Query: 1118 acttcaaagggagccaacgtcatgctcggtggtaaaagacacagcctcgggatgaccttt 1177 ||| |||||||| || |||| | ||||| ||||| ||||| || |||||||| || Sbjct: 1198 gtttctaagggagcaaaaatcatcattggtggcaaaaggcacagtctagggatgactttc 1257 Query: 1178 tatgagccaactgt 1191 |||||||| ||||| Sbjct: 1258 tatgagcctactgt 1271
>gb|AC187168.7| Glycine max clone gmp1-12a14, complete sequence Length = 151798 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1057 acagggtcctctaatcaatgaagctgc 1083 ||||||||||||||||||||||||||| Sbjct: 122369 acagggtcctctaatcaatgaagctgc 122395 Score = 50.1 bits (25), Expect = 0.030 Identities = 58/69 (84%) Strand = Plus / Plus Query: 908 cttgctgccaagtttcggaacagtggacagacatgtgtatgtgcaaacaggatattggtg 967 ||||| || ||||| || ||||||||||| |||||||| |||||||| || || | ||| Sbjct: 121337 cttgcagcaaagttccgtaacagtggacaaacatgtgtttgtgcaaatagaattattgtg 121396 Query: 968 caagaaggt 976 ||||||||| Sbjct: 121397 caagaaggt 121405 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 851 aatgcaccttgcattgttttcgatgatgc 879 |||||||||||||| ||||| |||||||| Sbjct: 118808 aatgcaccttgcatagtttttgatgatgc 118836
>gb|CP000436.1| Haemophilus somnus 129PT, complete genome Length = 2007700 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 407 tatggtgcaagtttcatagaattttttgctgaggaagcaaagcgtgtgtatggtgatatt 466 ||||||||||||||| | |||| |||||||||||||| || |||| |||||||| ||| Sbjct: 432707 tatggtgcaagtttcgtcgaatggtttgctgaggaagctaaacgtgcttatggtgagatt 432766 Query: 467 at 468 || Sbjct: 432767 at 432768
>gb|AC184062.2| Populus trichocarpa clone Pop1-107J2, complete sequence Length = 90108 Score = 50.1 bits (25), Expect = 0.030 Identities = 40/45 (88%) Strand = Plus / Minus Query: 927 acagtggacagacatgtgtatgtgcaaacaggatattggtgcaag 971 |||||||||| |||||||| ||||||||||| ||| | ||||||| Sbjct: 21973 acagtggacaaacatgtgtttgtgcaaacagaataattgtgcaag 21929
>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence Length = 80374 Score = 48.1 bits (24), Expect = 0.12 Identities = 57/68 (83%) Strand = Plus / Plus Query: 437 gaggaagcaaagcgtgtgtatggtgatattattcccccaactctagctgatcgcagacta 496 ||||| ||||| ||||| ||||||||||| ||||| || | ||| |||||||| |||| Sbjct: 51924 gaggaggcaaaacgtgtatatggtgatataattcctccgaatctgtctgatcgccgactg 51983 Query: 497 ttggttct 504 |||||||| Sbjct: 51984 ttggttct 51991 Score = 46.1 bits (23), Expect = 0.46 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1419 aggtggcgccattcgttggggttaagcagtctggccttgggcgggaaggatcaaaatatg 1478 ||||||| ||||||| || || ||||||||||| ||||| |||||||||| || |||| Sbjct: 55077 aggtggctccattcgggggagtgaagcagtctggtcttggaagggaaggatccaagtatg 55136 Query: 1479 gcatgga 1485 | ||||| Sbjct: 55137 gtatgga 55143 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 749 caggtcagaaagattacgttcacgggttcaacagctgttgg 789 ||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 53203 caggtgagaaaaatcacgttcacgggatcaacagcagttgg 53243
>ref|NM_001068368.1| Oryza sativa (japonica cultivar-group) Os08g0424500 (Os08g0424500) mRNA, complete cds Length = 1805 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 1317 agggaagaagtttttggtccagt 1339
>gb|DQ910546.1| Oryza sativa (japonica cultivar-group) betaine aldehyde dehydrogenase (BADH2) mRNA, complete cds Length = 1512 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 1171 agggaagaagtttttggtccagt 1193
>ref|XM_001101056.1| PREDICTED: Macaca mulatta similar to aldehyde dehydrogenase 5A1 precursor, isoform 2, transcript variant 1 (LOC707902), mRNA Length = 3647 Score = 46.1 bits (23), Expect = 0.46 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcatggatga 1488 |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 1755 aagcagtctggccttgggcgagaggggtccaagtatggcattgatga 1801
>ref|XM_001101142.1| PREDICTED: Macaca mulatta similar to aldehyde dehydrogenase 5A1 precursor, isoform 2, transcript variant 2 (LOC707902), mRNA Length = 3608 Score = 46.1 bits (23), Expect = 0.46 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcatggatga 1488 |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 1716 aagcagtctggccttgggcgagaggggtccaagtatggcattgatga 1762
>gb|AY196161.1| Solanum tuberosum nematode resistance-like protein (Gro1-11) gene, Gro1-11-P41 allele, complete sequence Length = 5993 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1213 tatgcttcttttcagggaagaag 1235 ||||||||||||||||||||||| Sbjct: 4887 tatgcttcttttcagggaagaag 4909
>gb|AY196157.1| Solanum tuberosum nematode resistance-like protein (Gro1-11) pseudogene, complete sequence Length = 13001 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1213 tatgcttcttttcagggaagaag 1235 ||||||||||||||||||||||| Sbjct: 8483 tatgcttcttttcagggaagaag 8505
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 46.1 bits (23), Expect = 0.46 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1386 ttgtcggtgtgaatgagggattgatttccac 1416 |||||||||| ||||| |||||||||||||| Sbjct: 106961 ttgtcggtgtcaatgaaggattgatttccac 106991
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 20377774 agggaagaagtttttggtccagt 20377796
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 125522 agggaagaagtttttggtccagt 125544
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 8404 agggaagaagtttttggtccagt 8426
>dbj|AK071221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C02, full insert sequence Length = 1807 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 1319 agggaagaagtttttggtccagt 1341
>dbj|AK060461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-B10, full insert sequence Length = 1317 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 829 agggaagaagtttttggtccagt 851
>dbj|AB096083.1| Oryza sativa (japonica cultivar-group) BADH2 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1512 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1226 agggaagaagtttttggtccagt 1248 ||||||||||||||||||||||| Sbjct: 1171 agggaagaagtttttggtccagt 1193
>gb|AC160095.1| Solanum lycopersicum clone BB, complete sequence Length = 121127 Score = 44.1 bits (22), Expect = 1.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1263 cattcaaaactgaggaggaagcaatccatctagcaaacgacaccaa 1308 ||||||||||||| ||| |||| || | ||||||||||||||||| Sbjct: 57650 cattcaaaactgaagagcaagccattgaactagcaaacgacaccaa 57695
>gb|AY196162.1| Solanum tuberosum nematode resistance-like protein (Gro1-3) gene, Gro1-3-P41 allele, complete sequence Length = 6052 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1214 atgcttcttttcagggaagaag 1235 |||||||||||||||||||||| Sbjct: 3455 atgcttcttttcagggaagaag 3476
>gb|AY196160.1| Solanum tuberosum nematode resistance-like protein (Gro1-10) gene, Gro1-10-P41 allele, partial cds Length = 8306 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1214 atgcttcttttcagggaagaag 1235 |||||||||||||||||||||| Sbjct: 5012 atgcttcttttcagggaagaag 5033
>gb|AY196158.1| Solanum tuberosum nematode resistance-like protein (Gro1-14) pseudogene, complete sequence Length = 7276 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1214 atgcttcttttcagggaagaag 1235 |||||||||||||||||||||| Sbjct: 3651 atgcttcttttcagggaagaag 3672
>gb|AY196152.1| Solanum tuberosum nematode resistance-like protein (Gro1-5) gene, Gro1-5-P40 allele, complete cds Length = 10528 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1214 atgcttcttttcagggaagaag 1235 |||||||||||||||||||||| Sbjct: 5047 atgcttcttttcagggaagaag 5068
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 44.1 bits (22), Expect = 1.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1263 cattcaaaactgaggaggaagcaatccatctagcaaacgacaccaa 1308 ||||||||||||| ||| |||| || | ||||||||||||||||| Sbjct: 57650 cattcaaaactgaagagcaagccattgaactagcaaacgacaccaa 57695
>ref|XM_840446.1| Trypanosoma brucei TREU927 chromosome 6 Length = 1788 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagtt 1249 ||||||||||||||||||||| Sbjct: 1315 gaagaagtttttggtccagtt 1335
>gb|AC182553.2| Mus musculus BAC clone RP24-560H20 from chromosome y, complete sequence Length = 145752 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1303 caccaatgcaggcttagctgc 1323 ||||||||||||||||||||| Sbjct: 103559 caccaatgcaggcttagctgc 103579
>gb|AY804192.1| Chorispora bungeana betaine-aldehyde dehydrogenase mRNA, complete cds Length = 1506 Score = 42.1 bits (21), Expect = 7.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 500 gttctgaagcagcctattggggtagttggagctattacaccatggaatt 548 ||||||||||| |||||||| || || ||| |||||||||||||||| Sbjct: 439 gttctgaagcaacctattggagttgtgggactgattacaccatggaatt 487
>gb|AC009259.8| Trypanosoma brucei chromosome 6 clone RPCI93-4F7, complete sequence Length = 153262 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagtt 1249 ||||||||||||||||||||| Sbjct: 6542 gaagaagtttttggtccagtt 6562
>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence Length = 140056 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagtt 1249 ||||||||||||||||||||| Sbjct: 133902 gaagaagtttttggtccagtt 133922
>gb|AC140300.3| Mus musculus BAC clone RP23-373O10 from chromosome 17, complete sequence Length = 189769 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 653 gcagaccttgctcttcaagctggaa 677 ||||||||| ||||||||||||||| Sbjct: 145475 gcagacctttctcttcaagctggaa 145451
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 625 gttcacacctctgacagcatt 645 ||||||||||||||||||||| Sbjct: 47093 gttcacacctctgacagcatt 47073
>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence Length = 224534 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 938 acatgtgtatgtgcaaacagg 958 ||||||||||||||||||||| Sbjct: 138487 acatgtgtatgtgcaaacagg 138467
>gb|AC145344.2| Mus musculus BAC clone RP24-134P13 from chromosome Y, complete sequence Length = 183987 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1303 caccaatgcaggcttagctgc 1323 ||||||||||||||||||||| Sbjct: 9903 caccaatgcaggcttagctgc 9883
>ref|XM_820354.1| Trypanosoma brucei TREU927 clone RPCI93-26G9 aldehyde dehydrogenase (Tb927.6.4210) partial mRNA Length = 1788 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1229 gaagaagtttttggtccagtt 1249 ||||||||||||||||||||| Sbjct: 1315 gaagaagtttttggtccagtt 1335
>gb|AC012031.17| Homo sapiens 3 BAC RP11-91K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157639 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1718 gtgaagagggaacacagttta 1738 ||||||||||||||||||||| Sbjct: 116298 gtgaagagggaacacagttta 116278
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 tcatcggcggcaagtgggtcg 137 ||||||||||||||||||||| Sbjct: 122846 tcatcggcggcaagtgggtcg 122866
>gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152210 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1718 gtgaagagggaacacagttta 1738 ||||||||||||||||||||| Sbjct: 8149 gtgaagagggaacacagttta 8129
>gb|AC108075.3| Homo sapiens BAC clone RP11-728C8 from 4, complete sequence Length = 167791 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 atgaaagaagcccttggggag 400 ||||||||||||||||||||| Sbjct: 95849 atgaaagaagcccttggggag 95869
>gb|AC091884.4| Homo sapiens chromosome 5 clone RP11-109J4, complete sequence Length = 192149 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 gatgctacttcaaagggagcc 1132 ||||||||||||||||||||| Sbjct: 38970 gatgctacttcaaagggagcc 38950
>gb|AC091928.3| Homo sapiens chromosome 5 clone RP11-292F10, complete sequence Length = 200923 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 gatgctacttcaaagggagcc 1132 ||||||||||||||||||||| Sbjct: 199542 gatgctacttcaaagggagcc 199522
>emb|AL137077.31| Human DNA sequence from clone RP11-11M20 on chromosome 20 Contains the 5' end of the TAF4 gene for TAF4 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 135 kDa), an RPL17 (ribosomal protein L17) pseudogene, the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and two CpG islands, complete sequence Length = 126712 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1485 atgacttcctggagattaagt 1505 ||||||||||||||||||||| Sbjct: 96531 atgacttcctggagattaagt 96511
>emb|AL033522.1|HS451B21 Human DNA sequence from clone RP3-451B21 on chromosome 6q24 Contains the HSPC228 gene for hypothetical protein HSPC228 and a novel gene, complete sequence Length = 135162 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1787 atgagttgtaaatgaatgaaa 1807 ||||||||||||||||||||| Sbjct: 68053 atgagttgtaaatgaatgaaa 68073
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1442 aagcagtctggccttgggcgggaaggatcaaaatatggcat 1482 ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct: 2497331 aagcattctggtctggggcgtgaaggctcaaaatatggcat 2497291
>emb|CR378677.1| Photobacterium profundum SS9 chromosome 2; segment 3/7 Length = 348759 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 512 cctattggggtagttggagctattacaccatggaattttcc 552 |||||||| || || || ||||||||||| ||||||||||| Sbjct: 67385 cctattggtgttgtcggggctattacaccgtggaattttcc 67425
>emb|AL672115.1|MLO672115 Mesorhizobium loti R7A symbiosis island; segment 4/4 Length = 50801 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 842 cttggtgggaatgcaccttgcattgttttcgatgatgcaga 882 |||||||| || || |||| ||||||||| ||||||||||| Sbjct: 4091 cttggtggtaacgctcctttcattgtttttgatgatgcaga 4131
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 521 gtagttggagctattacaccatggaattt 549 |||||||||| ||||||||||||||||| Sbjct: 2924376 gtagttggagtaattacaccatggaattt 2924348
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 tcatcggcggcaagtgggtcg 137 ||||||||||||||||||||| Sbjct: 1869683 tcatcggcggcaagtgggtcg 1869663 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 842 cttggtgggaatgcaccttgcattgttttcgatgatgcaga 882 |||||||| || || |||| ||||||||| ||||||||||| Sbjct: 4685902 cttggtggtaacgctcctttcattgtttttgatgatgcaga 4685862
>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence Length = 176196 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gaggaggaagcaatccatcta 1294 ||||||||||||||||||||| Sbjct: 37029 gaggaggaagcaatccatcta 37049
>gb|AY107633.1| Zea mays PCO135404 mRNA sequence Length = 1208 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 918 agtttcggaacagtggacagacatg 942 ||||||||||||||||| ||||||| Sbjct: 644 agtttcggaacagtggaaagacatg 668
>gb|AC145583.3| Mus musculus BAC clone RP24-154F7 from Y, complete sequence Length = 154648 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1303 caccaatgcaggcttagctgc 1323 ||||||||||||||||||||| Sbjct: 116757 caccaatgcaggcttagctgc 116777
>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence Length = 198130 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1303 caccaatgcaggcttagctgc 1323 ||||||||||||||||||||| Sbjct: 89553 caccaatgcaggcttagctgc 89573 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 338,334,191 Number of extensions: 17698102 Number of successful extensions: 320544 Number of sequences better than 10.0: 83 Number of HSP's gapped: 320543 Number of HSP's successfully gapped: 166 Length of query: 1893 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1870 Effective length of database: 18,503,978,556 Effective search space: 34602439899720 Effective search space used: 34602439899720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)