| Clone Name | FLbaf176n19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT836340.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA015F20, full insert sequence Length = 625 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 158 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 217 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 218 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 274
>dbj|AK242429.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080090D12, full insert sequence Length = 627 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 160 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 219 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 220 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 276
>ref|NM_001061374.1| Oryza sativa (japonica cultivar-group) Os05g0188100 (Os05g0188100) mRNA, complete cds Length = 270 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 61 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 120 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 121 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 177
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 45284 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 45343 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 45344 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 45400
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 44124 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 44183 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 44184 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 44240
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 184 bits (93), Expect = 3e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| Sbjct: 5358610 cgcagcgaccgcaagtcggcctccgggatgagcggcgagcccaagaagggcggccgcggc 5358669 Query: 201 ggcaagttcacctgggagggcgccgacggctacaccgacgaggaccttgacctcatc 257 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 5358670 ggcaagttcacctgggagggcgccgacggctacgccgacgaggacctcgacctcatc 5358726
>gb|AY106530.1| Zea mays PCO099802 mRNA sequence Length = 690 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagggcggccgtggc 200 ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 141 cgcagcgaccgcaagtcagcctccgggatgagcggcgaccccaagaagggcggccgcggc 200 Query: 201 ggcaagttcacctgggagggcgccgacggctac 233 |||||||||||||||||||||||||||| |||| Sbjct: 201 ggcaagttcacctgggagggcgccgacgactac 233 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 226 acggctacaccgacgaggaccttgacctcatc 257 |||||||| ||||||||||||| | ||||||| Sbjct: 238 acggctacgccgacgaggacctcggcctcatc 269
>gb|BC039189.1| Homo sapiens, clone IMAGE:5197990, mRNA Length = 217 Score = 113 bits (57), Expect = 8e-22 Identities = 97/109 (88%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 84 gggccggcgatggacggcgggaagaagggc---cgggaccagaacaagctgccgcagggg 140 |||||||| ||||||||||||||||||||| ||||||| ||||| | |||||| | Sbjct: 112 gggccggccatggacggcgggaagaagggcggccgggaccg---caagccggcgcaggag 168 Query: 141 cgcagcgaccgcaagtcgggctccgggatgagcggcgacgccaagaagg 189 ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 169 cgcagcgaccgcaagtcgggcaccgggatgagcggcgacgccaagaagg 217
>ref|NM_001072685.1| Oryza sativa (japonica cultivar-group) Os12g0147200 (Os12g0147200) mRNA, complete cds Length = 768 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgac 227 |||||| |||||||||||||||||||||||| ||||| Sbjct: 380 cggccgcggcggcaagttcacctgggagggccccgac 416
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgac 227 |||||| |||||||||||||||||||||||| ||||| Sbjct: 2311878 cggccgcggcggcaagttcacctgggagggccccgac 2311914
>dbj|AK063680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E05, full insert sequence Length = 773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgac 227 |||||| |||||||||||||||||||||||| ||||| Sbjct: 385 cggccgcggcggcaagttcacctgggagggccccgac 421
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgac 227 |||||| |||||||||||||||||||||||| ||||| Sbjct: 37069 cggccgcggcggcaagttcacctgggagggccccgac 37105
>ref|NM_001072286.1| Oryza sativa (japonica cultivar-group) Os11g0149200 (Os11g0149200) mRNA, complete cds Length = 441 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgacggc 230 |||||| ||||||||||||||||||||||| |||||||| Sbjct: 198 cggccgcggcggcaagttcacctgggaggggcccgacggc 237
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgacggc 230 |||||| ||||||||||||||||||||||| |||||||| Sbjct: 35438 cggccgcggcggcaagttcacctgggaggggcccgacggc 35477
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 cggccgtggcggcaagttcacctgggagggcgccgacggc 230 |||||| ||||||||||||||||||||||| |||||||| Sbjct: 2259439 cggccgcggcggcaagttcacctgggaggggcccgacggc 2259478
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 182 caagaagggcggccgtggcggcaag 206 ||||||||||||||||||||||||| Sbjct: 1372838 caagaagggcggccgtggcggcaag 1372862
>gb|DQ334063.1| Drosophila miranda CG10990 gene, partial cds Length = 1011 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 ccaagaagggcggccgtggcggcaag 206 |||||||||||||| ||||||||||| Sbjct: 311 ccaagaagggcggcggtggcggcaag 336
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 ggcgccgacggctacaccgac 239 ||||||||||||||||||||| Sbjct: 948140 ggcgccgacggctacaccgac 948160
>gb|DQ905954.1| Uncultured bacterium clone 29c-h10 16S ribosomal RNA gene, partial sequence Length = 1152 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 agggcggccgtggcggcaagt 207 ||||||||||||||||||||| Sbjct: 107 agggcggccgtggcggcaagt 127
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 ccctagtatctggatctcgca 499 ||||||||||||||||||||| Sbjct: 24255923 ccctagtatctggatctcgca 24255943
>gb|CP000368.1| Drosophila melanogaster genomic scaffold 211000022280785 Length = 567895 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 ccctagtatctggatctcgca 499 ||||||||||||||||||||| Sbjct: 287635 ccctagtatctggatctcgca 287615
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 cgggctccgggatgagcggcgacgc 181 |||||| |||||||||||||||||| Sbjct: 560601 cgggctacgggatgagcggcgacgc 560625
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 cgggctccgggatgagcggcgacgc 181 |||||| |||||||||||||||||| Sbjct: 3214170 cgggctacgggatgagcggcgacgc 3214146
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 acgccgtacgtcttcccgtcc 353 ||||||||||||||||||||| Sbjct: 3462185 acgccgtacgtcttcccgtcc 3462165
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 cgggctccgggatgagcggcgacgc 181 |||||| |||||||||||||||||| Sbjct: 2944035 cgggctacgggatgagcggcgacgc 2944011
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 ggcgccgacggctacaccgac 239 ||||||||||||||||||||| Sbjct: 169538 ggcgccgacggctacaccgac 169558
>gb|AC084599.1|CBRG42P09 Caenorhabditis briggsae cosmid G42P09, complete sequence Length = 44251 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 ttgatgtgatgatctattttcagtt 450 |||||||||||| |||||||||||| Sbjct: 2520 ttgatgtgatgacctattttcagtt 2496
>gb|DQ244686.1| Zea mays clone 10051 mRNA sequence Length = 678 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ggcggcaagttcacctgggagggc 221 |||||||||| ||||||||||||| Sbjct: 314 ggcggcaagtacacctgggagggc 337
>gb|CP000470.1| Shewanella sp. ANA-3 plasmid 1, complete sequence Length = 278942 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tgacctcatcggcaacaagggcaa 271 |||||||||||||||||| ||||| Sbjct: 192844 tgacctcatcggcaacaacggcaa 192867
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tgagcggcgacgccaagaagggcg 192 |||||||||||||||| ||||||| Sbjct: 2860201 tgagcggcgacgccaaaaagggcg 2860178
>ref|NM_001065777.1| Oryza sativa (japonica cultivar-group) Os07g0235200 (Os07g0235200) mRNA, partial cds Length = 3211 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggggccggcgatggacggcg 102 |||||||||||||||||||| Sbjct: 2758 ggggccggcgatggacggcg 2739
>gb|DQ493954.1| Magnaporthe grisea 70-15 clone 56L15 telomere region, partial sequence Length = 41298 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agaaaaaggggccggcgatg 95 |||||||||||||||||||| Sbjct: 9649 agaaaaaggggccggcgatg 9630
>ref|XM_361213.1| Magnaporthe grisea 70-15 hypothetical protein (MG10896.4) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agaaaaaggggccggcgatg 95 |||||||||||||||||||| Sbjct: 1345 agaaaaaggggccggcgatg 1326
>gb|AC161608.5| Mus musculus BAC clone RP23-146P11 from chromosome 14, complete sequence Length = 198014 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gcatgttgatgtgatgatct 440 |||||||||||||||||||| Sbjct: 118088 gcatgttgatgtgatgatct 118069
>gb|BT016198.1| Zea mays clone Contig31 mRNA sequence Length = 1137 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 446 gacctcatcggcaacaaggg 465
>gb|AC140850.20| Medicago truncatula clone mth2-11i23, complete sequence Length = 138846 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 gttgatttatgctcaatttg 571 |||||||||||||||||||| Sbjct: 75292 gttgatttatgctcaatttg 75273
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctttctcgttgccaccatc 62 |||||||||||||||||||| Sbjct: 1914235 cctttctcgttgccaccatc 1914254
>gb|AC145132.2| Homo sapiens chromosome 5 clone RP11-1113N2, complete sequence Length = 150263 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tgcctttttggcatgttgat 430 |||||||||||||||||||| Sbjct: 134897 tgcctttttggcatgttgat 134878
>gb|L24552.1|STMRPLJ Streptomyces coelicolor A3(2) ORF 1 gene, partial cds; and ORF 2, ribosomal protein L10 (rplJ), and ribosomal protein L12 (rplL) genes, complete cds Length = 3141 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcggcgacgccaagaagggc 191 |||||||||||||||||||| Sbjct: 1632 gcggcgacgccaagaagggc 1651
>dbj|AK164604.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430032E21 product:A kinase (PRKA) anchor protein 11, full insert sequence Length = 3070 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gcatgttgatgtgatgatct 440 |||||||||||||||||||| Sbjct: 438 gcatgttgatgtgatgatct 457
>gb|AY130859.1| Homo sapiens cyclin-dependent kinase 7 (CDK7) gene, complete cds Length = 44226 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tgcctttttggcatgttgat 430 |||||||||||||||||||| Sbjct: 9179 tgcctttttggcatgttgat 9198
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 tgagcggcgacgccaagaagggcg 192 |||| ||||||||||||||||||| Sbjct: 3190615 tgagtggcgacgccaagaagggcg 3190638
>dbj|AK040401.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430091L06 product:unclassifiable, full insert sequence Length = 1747 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 123 aaaaaggggccggcgatgga 142
>gb|AC093223.3| Homo sapiens chromosome 5 clone CTD-2220G6, complete sequence Length = 125980 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tgcctttttggcatgttgat 430 |||||||||||||||||||| Sbjct: 92279 tgcctttttggcatgttgat 92260
>dbj|AK008295.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010100D14 product:nuclear autoantigenic sperm protein (histone-binding), full insert sequence Length = 542 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 397 aaaaaggggccggcgatgga 378
>dbj|AK047499.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930079G11 product:unclassifiable, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 224 aaaaaggggccggcgatgga 243
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggggccggcgatggacggcg 102 |||||||||||||||||||| Sbjct: 7533299 ggggccggcgatggacggcg 7533318
>ref|XM_692794.1| PREDICTED: Danio rerio similar to Histone H1 (LOC569411), mRNA Length = 603 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caaggggaccggcgcctccg 288 |||||||||||||||||||| Sbjct: 264 caaggggaccggcgcctccg 283
>ref|XM_689619.1| PREDICTED: Danio rerio similar to complement C3 precursor alpha chain (LOC566347), mRNA Length = 5892 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tttttggcatgttgatgtga 434 |||||||||||||||||||| Sbjct: 1362 tttttggcatgttgatgtga 1343
>ref|XM_693405.1| PREDICTED: Danio rerio similar to Histone H1 (LOC569982), mRNA Length = 619 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caaggggaccggcgcctccg 288 |||||||||||||||||||| Sbjct: 283 caaggggaccggcgcctccg 302
>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE Length = 115705 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gctaatgccggatgaatttg 478 |||||||||||||||||||| Sbjct: 59182 gctaatgccggatgaatttg 59201
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcggcgacgccaagaagggc 191 |||||||||||||||||||| Sbjct: 246535 gcggcgacgccaagaagggc 246554
>gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190789 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttagattagaataataagaa 399 |||||||||||||||||||| Sbjct: 74223 ttagattagaataataagaa 74204
>gb|AY756822.1| Zea mays ribosome-inactivating protein (Lm-1) gene, complete cds Length = 906 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 394 gacctcatcggcaacaaggg 413
>gb|AF349432.1| Mus musculus histone binding protein NASP (Nasp) gene, complete cds, alternatively spliced Length = 26850 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 1637 aaaaaggggccggcgatgga 1618
>emb|X07987.1|ZMALBB32 Maize mRNA for albumin b-32 protein Length = 1044 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 433 gacctcatcggcaacaaggg 452
>dbj|AK120395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075G01, full insert sequence Length = 3213 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ggggccggcgatggacggcg 102 |||||||||||||||||||| Sbjct: 2759 ggggccggcgatggacggcg 2740
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggggccggcgatggacggcg 102 |||||||||||||||||||| Sbjct: 111613 ggggccggcgatggacggcg 111632
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ggggccggcgatggacggcg 102 |||||||||||||||||||| Sbjct: 38709 ggggccggcgatggacggcg 38728
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cgtacgtcttcccgtccgatcgat 360 ||||||||||| |||||||||||| Sbjct: 8304 cgtacgtcttcacgtccgatcgat 8327
>emb|BX649330.5| Zebrafish DNA sequence from clone CH211-140F21 in linkage group 22, complete sequence Length = 163964 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tttttggcatgttgatgtga 434 |||||||||||||||||||| Sbjct: 121796 tttttggcatgttgatgtga 121815
>emb|X54212.1|ZMB32120 Z.mays mRNA for b-32 protein, putative regulatory factor of zein expression (clone b-32.120) Length = 3093 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 2040 gacctcatcggcaacaaggg 2059
>emb|X70154.1|ZMB32152 Z.mays mRNA for b-32 protein, putative regulatory factor of zein expression (clone b-32.152) Length = 1826 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 1102 gacctcatcggcaacaaggg 1121
>emb|X70153.1|ZMB32129 Z.mays mRNA for b-32 protein, putative regulatory factor of zein expression (clone b-32.129) Length = 2741 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 1675 gacctcatcggcaacaaggg 1694
>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence Length = 198579 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcatgttgatgtgatgatctattt 444 |||||||||||||||||| ||||| Sbjct: 164946 gcatgttgatgtgatgatgtattt 164923
>gb|AY109436.1| Zea mays CL1124_1 mRNA sequence Length = 3101 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 2041 gacctcatcggcaacaaggg 2060
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 gggctccgggatgagcggcgacgc 181 ||||| |||||||||||||||||| Sbjct: 1930458 gggctacgggatgagcggcgacgc 1930481
>emb|BX004835.3| Mouse DNA sequence from clone RP23-290D3 on chromosome 4, complete sequence Length = 3994 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 3039 aaaaaggggccggcgatgga 3058
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaaaggggccggcgatgga 97 |||||||||||||||||||| Sbjct: 1045 aaaaaggggccggcgatgga 1064
>gb|DQ147065.1| Zea mays subsp. parviglumis isolate p15G ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147064.1| Zea mays subsp. parviglumis isolate p14H ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147063.1| Zea mays subsp. parviglumis isolate p13 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1211 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 681 gacctcatcggcaacaaggg 700
>gb|DQ147062.1| Zea mays subsp. parviglumis isolate p12 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1193 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 678 gacctcatcggcaacaaggg 697
>gb|DQ147061.1| Zea mays subsp. parviglumis isolate p11_B ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1189 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 680 gacctcatcggcaacaaggg 699
>gb|DQ147060.1| Zea mays subsp. parviglumis isolate p9 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 672 gacctcatcggcaacaaggg 691
>gb|DQ147059.1| Zea mays subsp. parviglumis isolate p8 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1192 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 677 gacctcatcggcaacaaggg 696
>gb|DQ147058.1| Zea mays subsp. parviglumis isolate p6 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1193 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 675 gacctcatcggcaacaaggg 694
>gb|DQ147057.1| Zea mays subsp. parviglumis isolate p5 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1170 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147056.1| Zea mays subsp. parviglumis isolate p4E ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1185 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 679 gacctcatcggcaacaaggg 698
>gb|DQ147055.1| Zea mays subsp. parviglumis isolate p3 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1185 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147054.1| Zea mays subsp. parviglumis isolate p2 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1181 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 672 gacctcatcggcaacaaggg 691
>gb|DQ147053.1| Zea mays subsp. parviglumis isolate p1H ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1182 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147052.1| Zea mays subsp. parviglumis isolate p1G ribosome inactivating protein 1-like (rip1) gene, partial sequence Length = 1190 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 676 gacctcatcggcaacaaggg 695
>gb|DQ147073.1| Zea diploperennis isolate d8 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1183 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 680 gacctcatcggcaacaaggg 699
>gb|DQ147072.1| Zea diploperennis isolate d7 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1191 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 679 gacctcatcggcaacaaggg 698
>gb|DQ147071.1| Zea diploperennis isolate d6 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1171 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 686 gacctcatcggcaacaaggg 705
>gb|DQ147070.1| Zea diploperennis isolate d4B ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1191 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 685 gacctcatcggcaacaaggg 704
>gb|DQ147069.1| Zea diploperennis isolate d3B ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1177 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 686 gacctcatcggcaacaaggg 705
>gb|DQ147068.1| Zea diploperennis isolate d2 ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1195 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 680 gacctcatcggcaacaaggg 699
>gb|DQ147067.1| Zea diploperennis isolate d1_E ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1195 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 680 gacctcatcggcaacaaggg 699
>gb|DQ147066.1| Zea diploperennis isolate d1_F ribosome inactivating protein 1 (rip1) gene, partial cds Length = 1287 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 790 gacctcatcggcaacaaggg 809
>gb|M77122.1|MZERIP Z.mays ribosome-inactivating protein mRNA, complete cds Length = 1076 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 421 gacctcatcggcaacaaggg 440
>gb|M83927.1|MZECRIP9A Zea mays ribosome-inactivating protein (CRIP9) mRNA, complete cds Length = 976 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 430 gacctcatcggcaacaaggg 449
>gb|M83926.1|MZECRIP3A Zea mays ribosome-inactivating protein (CRIP3) mRNA, complete cds Length = 1039 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacctcatcggcaacaaggg 268 |||||||||||||||||||| Sbjct: 413 gacctcatcggcaacaaggg 432 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 92,097,387 Number of extensions: 4587245 Number of successful extensions: 85075 Number of sequences better than 10.0: 94 Number of HSP's gapped: 85074 Number of HSP's successfully gapped: 95 Length of query: 621 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 599 Effective length of database: 18,508,616,841 Effective search space: 11086661487759 Effective search space used: 11086661487759 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)