| Clone Name | FLbaf180e23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY220734.1| Hordeum vulgare pathogenesis-related protein 10 (PR-10) mRNA, complete cds Length = 866 Score = 833 bits (420), Expect = 0.0 Identities = 432/436 (99%) Strand = Plus / Plus Query: 31 cagcagcgctagtgtgcagcgagccagtgaccgacggacaagaacaagatggtcgccggc 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15 cagcagcgctagtgtgcagcgagccagtgaccgacggacaagaacaagatggtcgccggc 74 Query: 91 tgtgtcatcaccgagcagtgtgccctgacggtgtcgacagagcggctgtggaaggtggtc 150 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75 tgtgtcatcaccgagcagtgtgccctggcggtgtcgacagagcggctgtggaaggtggtc 134 Query: 151 ttctccggcgaggacacggccgccctgcccaaggcctgcgcgggcttcatcgacattgtg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135 ttctccggcgaggacacggccgccctgcccaaggcctgcgcgggcttcatcgacgttgtg 194 Query: 211 gacgtcgagggcgacggcggacccggcagcgtcttcaccatgacgctcagcccggcggcg 270 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 195 gacgtcgagggcgacggcggacccggcagcgtcttcaccatgacgctcagtccggcggcg 254 Query: 271 gcggagctgtcaggctcgggcgtgatgaggagccgcgtgatggcccgcgacaacgcggct 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gcggagctgtcaggctcgggcgtgatgaggagccgcgtgatggcccgcgacaacgcggct 314 Query: 331 agggtgttcaagacggagatactggagggcggcaaggtgagcggccagctcaagtcgcag 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 agggtgttcaagacggagatactggagggcggcaaggtgagcggccagctcaagtcgcag 374 Query: 391 gttgtcgagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtg 450 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gtggtcgagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtg 434 Query: 451 gagtacgagaggctcg 466 |||||||||||||||| Sbjct: 435 gagtacgagaggctcg 450 Score = 676 bits (341), Expect = 0.0 Identities = 362/369 (98%) Strand = Plus / Plus Query: 463 ctcgccgccgggtacctcgaccagctcaagatggtcgaggcatacctggtcgcccaccct 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 ctcgccgccgggtacctcgaccagctcaagatggtcgaggcatacctggtcgcccaccct 548 Query: 523 gccgagtacgtctaattaaaacaacgcgacaaacatcagaaataaaacaatcttccttta 582 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 549 gccgagtacgtctaattaaaacaacgcgacaaacatcagaaataaatcaatcttccttta 608 Query: 583 taagaaagaataaataaataaactattaaggtgagtacatatctttgttttgaagaaatc 642 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 taagaaagaataaataaataaactattaaggtgagtacatatctttgttttgaagaaatt 668 Query: 643 atatgagcaagtagcccggtgttgtttgcttcgtggttgacttcgcgagaagaatgaagt 702 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 669 atatgagcaagtagcccggtgttgtttgcttcgtggttgacttcgcgagaagaatcaagt 728 Query: 703 ggtaatcattagtataaattgtttgaggtgtgtattgagtttttcatccctgttttaagt 762 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 729 agtaatcattagtataaattgtttggggtgtgtattgagtttttcatccctgttttaagt 788 Query: 763 ttgtatttcgtgtgtaagttacttcaagcattaatatagataaatattgaagccgtttgg 822 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 789 ttgtatttcgtgtgtaagttacttcaagcattaatgtagataaatattaaagccgtttgg 848 Query: 823 ttttgtgac 831 ||||||||| Sbjct: 849 ttttgtgac 857
>emb|CT828610.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN025O07, full insert sequence Length = 853 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 525 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 576 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 397 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 456 Query: 457 gag 459 ||| Sbjct: 457 gag 459
>ref|NM_001073530.1| Oryza sativa (japonica cultivar-group) Os12g0555500 (Os12g0555500) mRNA, complete cds Length = 831 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 508 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 559 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 380 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 439 Query: 457 gag 459 ||| Sbjct: 440 gag 442
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 22634535 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 22634586 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 22634407 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 22634466 Query: 457 gag 459 ||| Sbjct: 22634467 gag 22634469
>gb|AF274850.1|AF274850 Oryza sativa pathogenesis-related protein PR-10a (PR10a) gene, complete cds Length = 2594 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 2240 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 2291
>dbj|AK071613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104B18, full insert sequence Length = 814 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 526 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 577 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 398 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 457 Query: 457 gag 459 ||| Sbjct: 458 gag 460
>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138368 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 79655 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 79706 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 79527 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 79586 Query: 457 gag 459 ||| Sbjct: 79587 gag 79589
>dbj|D38170.1| Rice mRNA for probenazole-inducible protein PBZ1, complete cds Length = 833 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 508 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 559 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 380 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 439 Query: 457 gag 459 ||| Sbjct: 440 gag 442
>dbj|D82066.1| Oryza sativa gene for PBZ1, complete cds Length = 3188 Score = 48.1 bits (24), Expect = 0.052 Identities = 45/52 (86%) Strand = Plus / Plus Query: 486 gctcaagatggtcgaggcatacctggtcgcccaccctgccgagtacgtctaa 537 |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||| Sbjct: 2207 gctcaagatgatcgaggactacctcgtcgctcaccctgccgaatacgcctaa 2258 Score = 46.1 bits (23), Expect = 0.20 Identities = 53/63 (84%) Strand = Plus / Plus Query: 397 gagatgaagcttgaggcggccggggacggtgcttgtgtggcgaagctcagggtggagtac 456 |||| |||||||||||| |||| || || | |||||||| ||||||| |||||||||| Sbjct: 2079 gagacgaagcttgaggccaccggcgatggctcctgtgtggccaagctcaaggtggagtac 2138 Query: 457 gag 459 ||| Sbjct: 2139 gag 2141
>gb|AF287258.1| Vigna unguiculata aspartic proteinase gene, complete cds Length = 7087 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 582 ataagaaagaataaataaataaa 604 ||||||||||||||||||||||| Sbjct: 2230 ataagaaagaataaataaataaa 2208
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 accagctcaagatggtcgaggc 503 |||||||||||||||||||||| Sbjct: 651506 accagctcaagatggtcgaggc 651527
>gb|AC150596.4| Gorilla gorilla gorilla clone CH255-290E2, complete sequence Length = 51339 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 35770 aataaataaataaactattaag 35749
>gb|AC187380.3| Pan troglodytes BAC clone CH251-174A15 from chromosome 7, complete sequence Length = 165170 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 1362 aataaataaataaactattaag 1383
>gb|AC144597.3| Pongo pygmaeus clone CH253-431P2, complete sequence Length = 192425 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 161068 aataaataaataaactattaag 161047
>gb|AC187376.3| Pan troglodytes BAC clone CH251-415F11 from chromosome 7, complete sequence Length = 181935 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 92535 aataaataaataaactattaag 92514
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 113989 aataaataaataaactattaag 113968
>gb|AC087730.2| Pan troglodytes clone RP43-89H17, complete sequence Length = 148293 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 23244 aataaataaataaactattaag 23223
>gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complete sequence Length = 155881 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 60799 aataaataaataaactattaag 60778
>gb|AC117594.8| Mus musculus chromosome 3, clone RP23-335D16, complete sequence Length = 230457 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 tataagaaagaataaataaata 602 |||||||||||||||||||||| Sbjct: 119805 tataagaaagaataaataaata 119826
>gb|AC107381.2| Homo sapiens BAC clone RP11-41F9 from 4, complete sequence Length = 123044 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Plus Query: 579 tttataagaaagaataaataaataaa 604 ||||| |||||||||||||||||||| Sbjct: 26364 tttattagaaagaataaataaataaa 26389
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 646 tgagcaagtagcccggtgttgtttgc 671 |||||||||||||| ||||||||||| Sbjct: 61003 tgagcaagtagccctgtgttgtttgc 60978
>emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 in linkage group 13, complete sequence Length = 168518 Score = 44.1 bits (22), Expect = 0.80 Identities = 25/26 (96%) Strand = Plus / Minus Query: 582 ataagaaagaataaataaataaacta 607 |||||||| ||||||||||||||||| Sbjct: 64822 ataagaaaaaataaataaataaacta 64797
>gb|AC096647.1| Homo sapiens BAC clone RP11-2G16 from 2, complete sequence Length = 146935 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 583 taagaaagaataaataaataaa 604 |||||||||||||||||||||| Sbjct: 74736 taagaaagaataaataaataaa 74757
>emb|BX571979.8| Zebrafish DNA sequence from clone DKEYP-51C11 in linkage group 13, complete sequence Length = 165275 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaag 612 |||||||||||||||||||||| Sbjct: 4443 aataaataaataaactattaag 4422
>emb|CR376742.16| Zebrafish DNA sequence from clone CH211-207C17 in linkage group 24, complete sequence Length = 206722 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 583 taagaaagaataaataaataaactattaa 611 ||||| |||||||||||||||| |||||| Sbjct: 65454 taagacagaataaataaataaattattaa 65482
>ref|XM_001008083.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00006020) mRNA, complete cds Length = 13851 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 agaaagaataaataaataaactatt 609 |||||||| |||||||||||||||| Sbjct: 2237 agaaagaaaaaataaataaactatt 2261
>gb|AC191933.3| Mus musculus BAC clone RP24-326K24 from chromosome 17, complete sequence Length = 189278 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 117993 aagaaagaataaataaataaa 118013
>emb|CR759952.10| Zebrafish DNA sequence from clone CH211-168O24 in linkage group 11, complete sequence Length = 140106 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 2467 aagaaagaataaataaataaa 2487
>ref|XM_001002737.1| PREDICTED: Mus musculus zinc finger CCCH-type containing 7B, transcript variant 1 (Zc3h7b), mRNA Length = 3075 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 2894 aataaataaataaactattaa 2914
>ref|XM_994736.1| PREDICTED: Mus musculus zinc finger CCCH-type containing 7B, transcript variant 8 (Zc3h7b), mRNA Length = 3075 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 2894 aataaataaataaactattaa 2914
>ref|XM_001001575.1| PREDICTED: Mus musculus zinc finger CCCH-type containing 7B, transcript variant 3 (Zc3h7b), mRNA Length = 3075 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 2894 aataaataaataaactattaa 2914
>emb|BX901950.7| Zebrafish DNA sequence from clone DKEY-111C4 in linkage group 6, complete sequence Length = 146043 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 792 attaatatagataaatattga 812 ||||||||||||||||||||| Sbjct: 116508 attaatatagataaatattga 116488
>gb|AC158357.4| Mus musculus BAC clone RP23-434L22 from chromosome 8, complete sequence Length = 217671 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 67545 aataaataaataaactattaa 67565
>gb|AC154493.2| Mus musculus BAC clone RP24-108C24 from chromosome 17, complete sequence Length = 165064 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 107664 aagaaagaataaataaataaa 107644
>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence Length = 237423 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 39323 aataaataaataaactattaa 39343
>gb|AC002534.1| Arabidopsis thaliana BAC T32N15 from chromosome III near 54 cM, complete sequence Length = 101371 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 5037 aataaataaataaactattaa 5017
>gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, complete sequence Length = 211351 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aaagaataaataaataaacta 607 ||||||||||||||||||||| Sbjct: 4480 aaagaataaataaataaacta 4500
>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence Length = 160219 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 774 gtgtaagttacttcaagcatt 794 ||||||||||||||||||||| Sbjct: 34427 gtgtaagttacttcaagcatt 34407
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 49742 aataaataaataaactattaa 49722
>gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosome Y, complete sequence Length = 144831 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 5070 aagaaagaataaataaataaa 5090
>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete sequence Length = 225159 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 tataagaaagaataaataaataaac 605 |||| |||||||||||||||||||| Sbjct: 62911 tatatgaaagaataaataaataaac 62887
>gb|AC126047.3| Mus musculus BAC clone RP23-195C14 from X, complete sequence Length = 193191 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 94809 aagaaagaataaataaataaa 94829
>gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complete sequence Length = 190110 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aaagaataaataaataaacta 607 ||||||||||||||||||||| Sbjct: 179717 aaagaataaataaataaacta 179737
>gb|AC025047.17| Mus musculus chromosome 1, clone RP23-56I8, complete sequence Length = 220713 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 19907 aagaaagaataaataaataaa 19887
>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete sequence Length = 254449 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 ttataagaaagaataaataaataaa 604 |||||||||| |||||||||||||| Sbjct: 237531 ttataagaaacaataaataaataaa 237555
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggcgacggcggacccggcagc 240 ||||||||||||||||||||| Sbjct: 3369020 ggcgacggcggacccggcagc 3369000
>dbj|AK157711.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130006B15 product:hypothetical Zn-finger, C-x8-C-x5-C-x3-H type containing protein, full insert sequence Length = 2920 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 2895 aataaataaataaactattaa 2915
>dbj|AK165492.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530201K17 product:hypothetical protein, full insert sequence Length = 4619 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 4450 aataaataaataaactattaa 4470
>gb|AC069444.17| Homo sapiens 3 BAC RP11-169N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165093 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 50019 aataaataaataaactattaa 50039
>emb|CR388083.19| Zebrafish DNA sequence from clone DKEY-181J1 in linkage group 8, complete sequence Length = 101219 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aaagaataaataaataaacta 607 ||||||||||||||||||||| Sbjct: 44834 aaagaataaataaataaacta 44854
>gb|AC005184.1| Homo sapiens Xp22 bins 45-47 BAC GSHB-665N22 (Genome Systems Human BAC Library) complete sequence Length = 157981 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 142573 aataaataaataaactattaa 142553
>gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190723 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 717 taaattgtttgaggtgtgtat 737 ||||||||||||||||||||| Sbjct: 23000 taaattgtttgaggtgtgtat 22980
>emb|Z70719.1|HSV351F8 Human DNA sequence from clone GHc-351F8 on chromosome X, complete sequence Length = 45678 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 774 gtgtaagttacttcaagcatt 794 ||||||||||||||||||||| Sbjct: 4589 gtgtaagttacttcaagcatt 4609
>dbj|AB177478.1| Curculio hilgendorfi mitochondrial gene for NADH dehydrogenase subunit 5, partial cds Length = 1007 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 479 aataaataaataaactattaa 459
>dbj|AB177477.1| Curculio hilgendorfi mitochondrial gene for NADH dehydrogenase subunit 5, partial cds Length = 1007 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 479 aataaataaataaactattaa 459
>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence Length = 208509 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 69633 aataaataaataaactattaa 69613
>gb|AC009032.8| Homo sapiens chromosome 16 clone RP11-140H17, complete sequence Length = 184511 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 123842 aagaaagaataaataaataaa 123862
>emb|BX248496.13| Zebrafish DNA sequence from clone CH211-236J4 in linkage group 23, complete sequence Length = 159424 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 28318 aataaataaataaactattaa 28298
>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5 Length = 281723 Score = 42.1 bits (21), Expect = 3.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 576 tcctttataagaaagaataaataaataaa 604 |||| ||||| |||||||||||||||||| Sbjct: 142032 tcctatataaaaaagaataaataaataaa 142060
>emb|AL138653.1|ATT32A11 Arabidopsis thaliana DNA chromosome 3, BAC clone T32A11 Length = 129021 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 42356 aataaataaataaactattaa 42376
>emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364 Length = 14999 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 1009 aagaaagaataaataaataaa 989
>emb|BX957335.12| Zebrafish DNA sequence from clone CH211-119A10 in linkage group 11, complete sequence Length = 168444 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 9750 aagaaagaataaataaataaa 9770
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 105619 aagaaagaataaataaataaa 105599
>gb|U70263.1|BDU70263 Border disease virus strain BD31 polyprotein gene, complete cds Length = 12268 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 12183 aataaataaataaactattaa 12163
>gb|AC009558.14|AC009558 Homo sapiens chromosome 15, clone RP11-142J21, complete sequence Length = 184568 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 96916 aataaataaataaactattaa 96936
>gb|AC011443.6|AC011443 Homo sapiens chromosome 19 clone CTC-218B8, complete sequence Length = 156776 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 2021 aagaaagaataaataaataaa 2041
>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2 Length = 230573 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gccgcgtgatggcccgcgacaacgc 326 ||||| ||||||||||||||||||| Sbjct: 40805 gccgcctgatggcccgcgacaacgc 40829
>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15, complete sequence Length = 182149 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 562 aaataaaacaatcttcctttataag 586 |||||||||||||||| |||||||| Sbjct: 161697 aaataaaacaatcttcttttataag 161673
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gccgcgtgatggcccgcgacaacgc 326 ||||| ||||||||||||||||||| Sbjct: 2099290 gccgcctgatggcccgcgacaacgc 2099314 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gccgcgtgatggcccgcgacaacgc 326 ||||| ||||||||||||||||||| Sbjct: 9089516 gccgcctgatggcccgcgacaacgc 9089540
>gb|AC110075.4| Homo sapiens BAC clone RP11-258L23 from 2, complete sequence Length = 12267 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 agaaagaataaataaataaac 605 ||||||||||||||||||||| Sbjct: 4606 agaaagaataaataaataaac 4626
>gb|AC096511.4| Homo sapiens X BAC RP11-606J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76481 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 33409 aataaataaataaactattaa 33429
>dbj|AK129268.1| Mus musculus mRNA for mKIAA1031 protein Length = 4732 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 4551 aataaataaataaactattaa 4571
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 106177 aagaaagaataaataaataaa 106197
>gb|AC010605.4|AC010605 Homo sapiens chromosome 19 clone CTB-189B5, complete sequence Length = 86684 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 68440 aagaaagaataaataaataaa 68460
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 792 attaatatagataaatattga 812 ||||||||||||||||||||| Sbjct: 126291 attaatatagataaatattga 126311
>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence Length = 186742 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aaagaataaataaataaacta 607 ||||||||||||||||||||| Sbjct: 70255 aaagaataaataaataaacta 70275
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 aagctcagggtggagtacgag 459 ||||||||||||||||||||| Sbjct: 374808 aagctcagggtggagtacgag 374828
>gb|AC079442.24| Mus musculus strain C57BL/6J chromosome 3 clone rp23-379f4, complete sequence Length = 196996 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 1974 aagaaagaataaataaataaa 1954
>emb|Z97052.2|SPCC4G3 S.pombe chromosome III cosmid c4G3 Length = 41934 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 40792 aagaaagaataaataaataaa 40772
>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete sequence Length = 233590 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 8028 aagaaagaataaataaataaa 8048
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence Length = 199904 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 142909 aagaaagaataaataaataaa 142929
>gb|AF037409.1| Border disease virus strain V-TOB, 3' untranslated region Length = 271 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 137 aataaataaataaactattaa 117
>gb|AF037406.1| Border disease virus strain L83-84, 3' untranslated region Length = 273 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 137 aataaataaataaactattaa 117
>gb|AC073883.34| Mus musculus strain C57BL/6J chromosome 3 clone rp23-71e13, complete sequence Length = 213482 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 43728 aagaaagaataaataaataaa 43748
>emb|AL732546.13| Mouse DNA sequence from clone RP23-264D16 on chromosome 2, complete sequence Length = 233321 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 gaaataaaacaatcttccttt 581 ||||||||||||||||||||| Sbjct: 136944 gaaataaaacaatcttccttt 136924
>gb|AC163626.5| Mus musculus BAC clone RP23-137D2 from chromosome 1, complete sequence Length = 219189 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 56452 aagaaagaataaataaataaa 56472
>gb|AC171206.2| Mus musculus BAC clone RP23-416I23 from chromosome 9, complete sequence Length = 194366 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 aataaataaataaactattaa 611 ||||||||||||||||||||| Sbjct: 73953 aataaataaataaactattaa 73973
>emb|AL671922.16| Mouse DNA sequence from clone RP23-295K1 on chromosome X, complete sequence Length = 144463 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 aagaaagaataaataaataaa 604 ||||||||||||||||||||| Sbjct: 11108 aagaaagaataaataaataaa 11128 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 152,913,391 Number of extensions: 10743521 Number of successful extensions: 1010738 Number of sequences better than 10.0: 88 Number of HSP's gapped: 1010738 Number of HSP's successfully gapped: 97 Length of query: 844 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 822 Effective length of database: 18,508,616,841 Effective search space: 15214083043302 Effective search space used: 15214083043302 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)