ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf175j24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109119: | 32 | 0.28 | 2 | AK068172:Os01g0199900 | 32 | 0.37 | 3 | Os11g0133800:Os11g0133800 | 30 | 1.1 | 4 | AK106892:Os02g0694700 | 30 | 1.4 | 5 | AK066544:Os07g0102100 | 30 | 1.4 | 6 | Os03g0262200:Os03g0262200 | 29 | 3.1 | 7 | AK068850:Os10g0537300 | 29 | 3.1 | 8 | AK109521:Os07g0105300 | 28 | 6.9 | 9 | AK107419:Os07g0105300 | 28 | 6.9 | 10 | AK108772:Os02g0461500 | 27 | 8.9 | 11 | AK059179:Os11g0216100 | 27 | 9.0 |
|---|
>AK109119: | Length = 940 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 10 HPPRSAATPRVHTPNPTLSSLRTACPHAPSASSG 111 H P A+ HTPN T + TA PH+ + SG Sbjct: 602 HSPAGASGSSTHTPNSTATDDSTATPHSNGSGSG 635
>AK068172:Os01g0199900 | Length = 631 Score = 32.0 bits (71), Expect = 0.37 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 10 HPPRSAATPRVHTPNPTLSSLRTACPHAPSASSGGDSEIP 129 HP R++ TPR +P P LS LR PS G S+ P Sbjct: 26 HPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEGHSDQP 65
>Os11g0133800:Os11g0133800 | Length = 483 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3 Query: 477 GDQSGSILQALQTSASYFLLYIFEIIYTYLGACFVGG 587 GD GSI +AL+ F+L IIYT++ FVGG Sbjct: 243 GDDGGSIWKALRKETYSFVL----IIYTFIVVWFVGG 275
>AK106892:Os02g0694700 | Length = 415 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +1 Query: 13 PPRSAATPRVHTPNPTLSSLRTACPHAPSASSGGDSEIP 129 P A PR P T S+ + P APSA SG S P Sbjct: 337 PTAPGAAPRAWRPATTPSARGASSPSAPSAGSGATSGTP 375
>AK066544:Os07g0102100 | Length = 808 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Frame = +1 Query: 13 PPRSAATPRVHTPNPTLS-------SLRTACPHAPSASSGGDSEIP 129 PPRSAA P +P P S S RTA P A +SS S P Sbjct: 115 PPRSAAPPSSASPPPPRSAPSGSRTSSRTAAPSASPSSSSPSSPPP 160
>Os03g0262200:Os03g0262200 | Length = 660 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Frame = +1 Query: 13 PPRSAATPRVHTPNPTLSSLRTACP------HAPSASSGGDS 120 PP S P V T LR+ P HAP++ SGGDS Sbjct: 210 PPPSMVRPAVCVVESTWDILRSFAPEEDSHAHAPASRSGGDS 251
>AK068850:Os10g0537300 | Length = 1096 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 16 PRSAATPRVHTPNPTLSSLRTACPHAPSASSGGD 117 PR AA PRV PNP L TA P + ++ GD Sbjct: 37 PRPAADPRVRNPNPPGLDLPTA-PSLYTTAAAGD 69
>AK109521:Os07g0105300 | Length = 161 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 13 PPRSAATPRVHTPNPTLSSLRTACPHAPSASS 108 PP A P + TP P L S P APS ++ Sbjct: 129 PPPPPAAPALVTPPPALPSAPPPAPEAPSPTA 160
>AK107419:Os07g0105300 | Length = 161 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 13 PPRSAATPRVHTPNPTLSSLRTACPHAPSASS 108 PP A P + TP P L S P APS ++ Sbjct: 129 PPPPPAAPALVTPPPALPSAPPPAPEAPSPTA 160
>AK108772:Os02g0461500 | Length = 304 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = -3 Query: 479 PEPTETRGKKNEGPIPNLGGGTGEKREEAC*NPPGP 372 P P++++GKK++ P P G + + ++ + PGP Sbjct: 207 PSPSKSKGKKSDAPAP---GPSDDVDDDTAADAPGP 239
>AK059179:Os11g0216100 | Length = 251 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 537 TVRSMKHWSVELEGWILIDPRADGNKRKEK 448 TV + HWS EGW+ + + DG RK++ Sbjct: 64 TVDTRIHWSDPDEGWVGGNAKKDGGGRKKE 93 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,249,226 Number of extensions: 367083 Number of successful extensions: 1270 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1268 Number of HSP's successfully gapped: 11 Length of query: 215 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 119 Effective length of database: 11,555,919 Effective search space: 1375154361 Effective search space used: 1375154361 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
