ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf175i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101589:Os03g0740600 | 642 | 0.0 | 2 | AK073852:Os03g0740600 | 642 | 0.0 | 3 | Os09g0421100:Os09g0421100 | 431 | e-121 | 4 | AK066896:Os03g0270200 | 32 | 1.5 | 5 | AK060809:Os03g0270200 | 32 | 1.5 | 6 | AK070248:Os03g0157800 | 30 | 5.6 | 7 | AK067375:Os03g0157800 | 30 | 5.6 | 8 | Os02g0729500:Os02g0729500 | 29 | 7.3 | 9 | AK069802:Os02g0327500 | 29 | 7.3 | 10 | AK121814:Os04g0608400 | 29 | 9.5 |
|---|
>AK101589:Os03g0740600 | Length = 375 Score = 642 bits (1657), Expect = 0.0 Identities = 314/361 (86%), Positives = 328/361 (90%) Frame = +3 Query: 99 MAGEGGTSGERSKDPLEGVRAIVLKPSETLDESRFTKIXXXXXXXXXXXXXXXXXXXXST 278 MAG GG G R D LEGVR+IVLKPSE+LDE RFT+I +T Sbjct: 1 MAGAGG-GGVRDMDALEGVRSIVLKPSESLDEGRFTRIAGADFNDAGLGLPGLLASLATT 59 Query: 279 GFQASNLGDAIDVVNQMIDWRLSHEKPSEDCDEAELDPKYRESVKCKIFLGFTSNLVSSG 458 GFQASNLGDA+DVVNQM+DWRLSHEKP EDCDEAELDP YRESVKCKIFLGFTSNLVSSG Sbjct: 60 GFQASNLGDAVDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSG 119 Query: 459 IRDVIRFLVQHRMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGALLRSKGLNRIGNLLV 638 IRDV+RFLVQH MVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPG LLRSKGLNRIGNLLV Sbjct: 120 IRDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLV 179 Query: 639 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIARLGKEINDETSYLYWAYKNNIPVY 818 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIA LGKEINDE+SYLYWAYKNNIPVY Sbjct: 180 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVY 239 Query: 819 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLINGEAIHASPRKTGVIILGGGLPKHHI 998 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRL+NGEAIHA+PRKTG+I+LGGGLPKHHI Sbjct: 240 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHI 299 Query: 999 CNANMFRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIKGSAKPVKVHCDATIAFPLL 1178 CNANMFRNGADYAVYINTAQEFDGSDSGA+PDEAVSWGKIKGSAKPVKVHCDATIAFPL+ Sbjct: 300 CNANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVHCDATIAFPLI 359 Query: 1179 V 1181 V Sbjct: 360 V 360
>AK073852:Os03g0740600 | Length = 375 Score = 642 bits (1657), Expect = 0.0 Identities = 314/361 (86%), Positives = 328/361 (90%) Frame = +3 Query: 99 MAGEGGTSGERSKDPLEGVRAIVLKPSETLDESRFTKIXXXXXXXXXXXXXXXXXXXXST 278 MAG GG G R D LEGVR+IVLKPSE+LDE RFT+I +T Sbjct: 1 MAGAGG-GGVRDMDALEGVRSIVLKPSESLDEGRFTRIAGADFNDAGLGLPGLLASLATT 59 Query: 279 GFQASNLGDAIDVVNQMIDWRLSHEKPSEDCDEAELDPKYRESVKCKIFLGFTSNLVSSG 458 GFQASNLGDA+DVVNQM+DWRLSHEKP EDCDEAELDP YRESVKCKIFLGFTSNLVSSG Sbjct: 60 GFQASNLGDAVDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSG 119 Query: 459 IRDVIRFLVQHRMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGALLRSKGLNRIGNLLV 638 IRDV+RFLVQH MVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPG LLRSKGLNRIGNLLV Sbjct: 120 IRDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLV 179 Query: 639 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIARLGKEINDETSYLYWAYKNNIPVY 818 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIA LGKEINDE+SYLYWAYKNNIPVY Sbjct: 180 PNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVY 239 Query: 819 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLINGEAIHASPRKTGVIILGGGLPKHHI 998 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRL+NGEAIHA+PRKTG+I+LGGGLPKHHI Sbjct: 240 CPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHI 299 Query: 999 CNANMFRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIKGSAKPVKVHCDATIAFPLL 1178 CNANMFRNGADYAVYINTAQEFDGSDSGA+PDEAVSWGKIKGSAKPVKVHCDATIAFPL+ Sbjct: 300 CNANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVHCDATIAFPLI 359 Query: 1179 V 1181 V Sbjct: 360 V 360
>Os09g0421100:Os09g0421100 | Length = 309 Score = 431 bits (1108), Expect = e-121 Identities = 227/353 (64%), Positives = 247/353 (69%), Gaps = 5/353 (1%) Frame = +3 Query: 99 MAGEGGTSGE-----RSKDPLEGVRAIVLKPSETLDESRFTKIXXXXXXXXXXXXXXXXX 263 MA EGG+ G R D L+GVR+IVLKPSE+LDE RFT+I Sbjct: 1 MAWEGGSGGSGGGGARDMDALQGVRSIVLKPSESLDEGRFTRIAGADFNDAGLGLSGMLA 60 Query: 264 XXXSTGFQASNLGDAIDVVNQMIDWRLSHEKPSEDCDEAELDPKYRESVKCKIFLGFTSN 443 +TGFQASNLGDA+DVVNQM++WRLSHEKP EDCDE ELDP YRESVKCKIFLGFTSN Sbjct: 61 SLATTGFQASNLGDAVDVVNQMLEWRLSHEKPREDCDEPELDPTYRESVKCKIFLGFTSN 120 Query: 444 LVSSGIRDVIRFLVQHRMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGALLRSKGLNRI 623 LVSSGIRDV+RFLVQH MVDVIVTTAGGIEEDLIKCLAPTYRG+FSLPG LLRSKGLNRI Sbjct: 121 LVSSGIRDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGDFSLPGTLLRSKGLNRI 180 Query: 624 GNLLVPNDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIARLGKEINDETSYLYWAYKN 803 GNLLVPNDNYCKFENWIM Sbjct: 181 GNLLVPNDNYCKFENWIM------------------------------------------ 198 Query: 804 NIPVYCPALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLINGEAIHASPRKTGVIILGGGL 983 P++ P +T GD IRL+NGEAIHA+PRKTG+I+LGGGL Sbjct: 199 --PIFLPDVTRAIQGD-------------------IRLMNGEAIHATPRKTGIIVLGGGL 237 Query: 984 PKHHICNANMFRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIKGSAKPVK 1142 PKHHICNANMFRNGAD+AVYINTAQEFDGSDSGA+PDEAVSWGKIKGSAKPVK Sbjct: 238 PKHHICNANMFRNGADFAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVK 290
>AK066896:Os03g0270200 | Length = 840 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNKSEP---GSARL 1 R P P R RP PSP RP S RRR R G + P GS RL Sbjct: 362 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSRSPGRRRSPSPRGSPRL 413 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/43 (41%), Positives = 19/43 (44%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNK 25 R P P R RP PSP RP S RRR R P G + Sbjct: 342 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSPSPGRR 382 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/43 (41%), Positives = 19/43 (44%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNK 25 R P P R RP PSP RP S RRR R P G + Sbjct: 352 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSPSPGRR 392
>AK060809:Os03g0270200 | Length = 580 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNKSEP---GSARL 1 R P P R RP PSP RP S RRR R G + P GS RL Sbjct: 102 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSRSPGRRRSPSPRGSPRL 153 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/43 (41%), Positives = 19/43 (44%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNK 25 R P P R RP PSP RP S RRR R P G + Sbjct: 82 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSPSPGRR 122 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/43 (41%), Positives = 19/43 (44%) Frame = -3 Query: 153 RPPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNK 25 R P P R RP PSP RP S RRR R P G + Sbjct: 92 RRPRSPSPGRR--RPRSPSPGRRRPRSPSPGRRRPRSPSPGRR 132
>AK070248:Os03g0157800 | Length = 296 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 99 SPANHRPGGLSTSRRRARFPPSGNKSE 19 SP ++ L RRR FPPSGN S+ Sbjct: 267 SPTGNKERDLQNPRRRQSFPPSGNISD 293
>AK067375:Os03g0157800 | Length = 600 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 99 SPANHRPGGLSTSRRRARFPPSGNKSE 19 SP ++ L RRR FPPSGN S+ Sbjct: 571 SPTGNKERDLQNPRRRQSFPPSGNISD 597
>Os02g0729500:Os02g0729500 | Length = 258 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -3 Query: 147 PAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPSGNKSEPGSARL 1 P GP A +W PLR +PA P G RR P+ + PGS L Sbjct: 5 PVGP--AAQWLLPLRRAPAVSPPSGSYRPRR-----PAAPTAPPGSRGL 46
>AK069802:Os02g0327500 | Length = 439 Score = 29.3 bits (64), Expect = 7.3 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 8/37 (21%) Frame = +3 Query: 1032 YAVYINTAQEFDGSDSGAR--------PDEAVSWGKI 1118 Y+VY++T F+GSD G P + V WG+I Sbjct: 194 YSVYVHTDPAFNGSDPGEASVFYRRTIPSKEVKWGEI 230
>AK121814:Os04g0608400 | Length = 880 Score = 28.9 bits (63), Expect = 9.5 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = -3 Query: 150 PPAGPCCALRWFRPLRPSPANHRPGGLSTSRRRARFPPS 34 PP+ P P P P H P L T R R R PS Sbjct: 31 PPSSP--------PSSPPPLRHSPAALGTPRSRRRHSPS 61 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,922,974 Number of extensions: 911328 Number of successful extensions: 2759 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2752 Number of HSP's successfully gapped: 17 Length of query: 480 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 376 Effective length of database: 11,235,591 Effective search space: 4224582216 Effective search space used: 4224582216 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
