| Clone Name | FLbaf175b18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068124:Os08g0338200 | 1011 | 0.0 | 2 | AY224554:Os02g0148300 | 35 | 0.25 | 3 | AK121228:Os01g0174200 | 35 | 0.33 | 4 | AK100499:Os12g0540800 | 32 | 2.8 | 5 | Os10g0462700:Os10g0462700 | 31 | 3.6 | 6 | AK122164:Os02g0105100 | 30 | 6.2 | 7 | Os02g0654600:Os02g0654600 | 30 | 8.0 | 8 | AK071432:Os04g0508000 | 30 | 8.0 |
|---|
>AK068124:Os08g0338200 | Length = 604 Score = 1011 bits (2614), Expect = 0.0 Identities = 506/604 (83%), Positives = 552/604 (91%), Gaps = 4/604 (0%) Frame = +1 Query: 400 MGTMTIGAKYKATLKDRGTGGVLRMSEDKFTFTPNDPRSLMKLSVDFQTIKGHKFNKVDG 579 MG+MTIGAKYK TLKD GT GVLRM+EDKFTFTP+DPRS MKL+VDF++IKGHKFNKVDG Sbjct: 1 MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60 Query: 580 SKPTPALLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSA 759 SKP P LLNLSKDSDKGGGY+FEFDNV NRDL RDFVA+VLGK QGT+P +PNVPPE S Sbjct: 61 SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSV 120 Query: 760 VSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKGS 939 STG EQLS+AEM+RRMKLL+EDSELQKLH KFVLGNILQESEFWATRKNLL+DE +KGS Sbjct: 121 TSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGS 180 Query: 940 KQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKD 1119 KQ+PGFKSAMLADVRPSADG+TNKVTFSLTTEIIHQIFAEKPAVHRAFLD+VPKK+SEKD Sbjct: 181 KQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKD 240 Query: 1120 FWTKYCRAEYLLRTKNTLXXXXXXXXXXXXXMFLKNDDILAKEAKLKIKRVDPTLDMEAD 1299 FWTKY RAEYLLRTKNT+ +FLKNDDILAKEA+LKIKRVDPTLDMEAD Sbjct: 241 FWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEAD 300 Query: 1300 AGDDYIHLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSADIESTDTKTV 1479 AGDDYIHLPDHGI+RDGS+ET D D ELARRTLSQDLNRHAAVVLEGRS+D+E TDTKTV Sbjct: 301 AGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTV 360 Query: 1480 AEALARSKKEPPPSSVADDASHERLVKAARMTEIEDLQAPRSLPYALLCIKDPREYFDSQ 1659 AEA+ARSKKEPP SS++DD +HERLVK ARMTEIEDLQAPRSLPYA LCIKDPREYFDSQ Sbjct: 361 AEAIARSKKEPPSSSISDDTNHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ 420 Query: 1660 QANALRPL-GSNDGRKARSCSLSTDDAFRHLMDQISSVK---MNCPVVQSDVALKVLNEL 1827 QANALR L G+NDGR AR+C LSTDDAF HL+ QISS+K +N PV+QSDVALKVLNEL Sbjct: 421 QANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALKVLNEL 480 Query: 1828 NEGISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWMAIQELLRHFWSSYPITTTVLCNKV 2007 NEGISRSRRLNLKNPQDSLLG++P RTRDELMDHW AIQELL+HFWSSYPITT+VL NKV Sbjct: 481 NEGISRSRRLNLKNPQDSLLGQIPRRTRDELMDHWAAIQELLQHFWSSYPITTSVLYNKV 540 Query: 2008 QRLKEAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFNHEHDQQQKSSKAGSK 2187 QR+K+AMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFNH+ +QQQKSSK+G+K Sbjct: 541 QRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFNHDLEQQQKSSKSGNK 600 Query: 2188 PNGF 2199 PNGF Sbjct: 601 PNGF 604
>AY224554:Os02g0148300 | Length = 257 Score = 35.0 bits (79), Expect = 0.25 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Frame = +1 Query: 1222 KNDDILAKEAKLKIKRVDPTLDMEADAGDDYIHLPDHGILRDGSRETTDTDSELARRTLS 1401 K+ ++L + K +V DMEA A D HG ++D S E + D E+ + Sbjct: 3 KHSEMLLNQKKNLETQVSELKDMEAVAHDQ------HGRIKDLSDELSKKDQEIEGLMQA 56 Query: 1402 QDLNRHAAVVLEGRSADIE----STDTKTVAEALARSKKEPPPSSVADDASHERLVKAAR 1569 D VLE +S D+E + + ++R+K ++ D + + Sbjct: 57 LDEEERELEVLENKSNDLEKMLQEKEFALKSLEVSRTKALTKLATTVDKFDELHSLSESL 116 Query: 1570 MTEIEDLQA 1596 + E+E+LQ+ Sbjct: 117 LAEVENLQS 125
>AK121228:Os01g0174200 | Length = 99 Score = 34.7 bits (78), Expect = 0.33 Identities = 15/26 (57%), Positives = 15/26 (57%) Frame = -3 Query: 164 WSHSRGGTRDATGSWASGTGRELGGG 87 WS RGGTRD W SG R GGG Sbjct: 19 WSWCRGGTRDRRRRWRSGCRRRRGGG 44
>AK100499:Os12g0540800 | Length = 527 Score = 31.6 bits (70), Expect = 2.8 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = +1 Query: 787 SAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKGSKQKPGFK 960 SAE R +L E S+LQ+ +K + + +ESE K+ D++S GS Q+P K Sbjct: 465 SAEEARASQLENEISDLQQRLQK--METLEKESESLRLEKDAESDDSSSGSNQRPADK 520
>Os10g0462700:Os10g0462700 | Length = 211 Score = 31.2 bits (69), Expect = 3.6 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -3 Query: 194 KEGFARAVGGWSHSRGGTRDATGSWASGTGRELGG 90 KEG AR +G W +G R+ W G G G Sbjct: 126 KEGAARRLGPWLRRKGAEREGCRRWGEGEGERRRG 160
>AK122164:Os02g0105100 | Length = 683 Score = 30.4 bits (67), Expect = 6.2 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +1 Query: 1339 LRDGSRETTDTDSELAR-RTLSQDLNRHAAVVLEGRSADIESTDTKTVAEALARSKKEPP 1515 L+ G + DT ++A LS R +++ G+ AD+ + D + ++ EP Sbjct: 36 LQLGDKFYVDTVKKMAHCHFLSGSPLRTLCLLIAGQPADVFNADNNISSNYGSQQPMEPS 95 Query: 1516 PSSVADDASHERLVKAARMTEIEDL 1590 P+ + DD + A T+ +DL Sbjct: 96 PNGMLDDWEENLAIITANRTKGDDL 120
>Os02g0654600:Os02g0654600 | Length = 582 Score = 30.0 bits (66), Expect = 8.0 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +1 Query: 1303 GDDYIHLPDHGILRDGSRETTDTDSELA--RRTLSQDLNRHAAVVLEGRSADIESTDTKT 1476 GDD +H RD S E E+A RRT+ ++ +HA + RSA + K Sbjct: 500 GDDGMHA------RDASNEVAQRRDEIAACRRTVEDEMRKHAKAIDATRSAAVTCVQGKL 553 Query: 1477 VA 1482 A Sbjct: 554 PA 555
>AK071432:Os04g0508000 | Length = 711 Score = 30.0 bits (66), Expect = 8.0 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 5/78 (6%) Frame = +1 Query: 1342 RDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSAD-----IESTDTKTVAEALARSKK 1506 R ET RR ++ HA V G S D + ST T A A A + Sbjct: 207 RQQREETATPMPRWQRRDEEKNSTHHAIVAAPGNSTDAPAPPLNSTATPRAAAAAAATPS 266 Query: 1507 EPPPSSVADDASHERLVK 1560 PP SH R ++ Sbjct: 267 TPPERKADTHHSHRRGIR 284 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 64,584,117 Number of extensions: 1395299 Number of successful extensions: 4467 Number of sequences better than 10.0: 8 Number of HSP's gapped: 4460 Number of HSP's successfully gapped: 8 Length of query: 829 Length of database: 15,399,855 Length adjustment: 109 Effective length of query: 720 Effective length of database: 11,035,386 Effective search space: 7945477920 Effective search space used: 7945477920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)