>P90666:TXND3_ANTCR Thioredoxin domain-containing protein 3 homolog - Anthocidaris|
           crassispina (Sea urchin)
          Length = 837
 Score = 34.3 bits (77), Expect = 0.61
 Identities = 29/102 (28%), Positives = 42/102 (41%)
 Frame = +2

Query: 227 DGGKKPAEEETKPAPATGPVCFKKPAGEDAGILETTKGYLKQLGDTNADTHWDCIKNRVR 406
           +GG+KPAEEET+          + PA ++A   +T +G                      
Sbjct: 707 EGGEKPAEEETQQTQEG-----ETPAADEAQAEQTQEG-------------------ETP 742

Query: 407 AAREYISSKTSSAFGRQKVEPEAKEETPVAKPETAPAATESQ 532
           AA E  + +T     ++  E EA   T     E APAA E+Q
Sbjct: 743 AADEAQAEQTQEGEEQKPAEEEAAPATEETAAEQAPAAEETQ 784

>P17691:NEUM_CARAU Neuromodulin - Carassius auratus (Goldfish)|
          Length = 213

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 27/98 (27%), Positives = 37/98 (37%)
 Frame = +2

Query: 239 KPAEEETKPAPATGPVCFKKPAGEDAGILETTKGYLKQLGDTNADTHWDCIKNRVRAARE 418
           KPAE+   PA    P      A  D    E  +   +QL D       +       AA +
Sbjct: 97  KPAEQPNSPAAEAPPTAATDSAPSDTPTKEEAQ---EQLQDAEEPKETE----NTAAADD 149

Query: 419 YISSKTSSAFGRQKVEPEAKEETPVAKPETAPAATESQ 532
             + K       ++ E E +E      P+  PAATESQ
Sbjct: 150 ITTQKEEEKEEEEEEEEEEEEAKRADVPDDTPAATESQ 187

>P17984:YIA2_RHISP Insertion element ISR1 uncharacterized 17 kDa protein A2 -|
           Rhizobium sp.
          Length = 161

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +1

Query: 304 GRGRRHPGDHQGLPQAARGHQRRHALGLHQEQGP 405
           G GRRHP       +AAR H++R   G+H E+GP
Sbjct: 18  GVGRRHPA-----ARAARHHRQRQRHGVHLERGP 46

>Q5K9L9:ATG4_CRYNE Cysteine protease ATG4 - Cryptococcus neoformans (Filobasidiella|
           neoformans)
          Length = 1193

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +2

Query: 401 VRAAREYISSKTSSAFGRQKVEPEAKEETPVAKPETAPAATESQ*SRPEHVIVFDEPE 574
           V +A+E  S+++SS       E E++E   +  PET  + T S  S PEHV   D+ E
Sbjct: 806 VHSAKEKGSTESSSIMST--AEEESEEGVMIRTPETPRSTTPSMFSAPEHVEDEDQEE 861

>P12036:NFH_HUMAN Neurofilament heavy polypeptide - Homo sapiens (Human)|
          Length = 1026

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
 Frame = +2

Query: 221 SDDGGKKPAEEETKPAPATGPVCFKKPAGEDAGILETTKGYLKQLGDTNADTHWDCIKNR 400
           S +  K PA+EE K  P       K P  E+A      K   K       +         
Sbjct: 546 SPEKAKSPAKEEAKSPPEA-----KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKS 600

Query: 401 VRAAREYISSKTSS-AFGRQKVEPEAKEETPVAKPETAPAATESQ*SRPE 547
              A+  +  +  S A  +  V+ EAK    V  PE A + T+ +   PE
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE 650

>O88278:CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 precursor - Rattus|
            norvegicus (Rat)
          Length = 3313

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 233  GKKPAEEETKPAPATGPVCFKKPA-GEDAGILETTKG 340
            GKK A EET+PAP  G   +   A  E++G++  T G
Sbjct: 2787 GKKAAPEETRPAPGPGSGAYNNTALFEESGLIRITLG 2823

>Q91ZI0:CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 precursor - Mus|
            musculus (Mouse)
          Length = 3301

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 233  GKKPAEEETKPAPATGPVCFKKPA-GEDAGILETTKG 340
            GKK A EET+PAP  G   +   A  E++G++  T G
Sbjct: 2779 GKKAAPEETRPAPGPGSGAYNNTALFEESGLIRITLG 2815

>Q9NYQ7:CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 precursor - Homo|
            sapiens (Human)
          Length = 3312

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 233  GKKPAEEETKPAPATGPVCFKKPA-GEDAGILETTKG 340
            G+K A EE +PAP  GP  +   A  E++G++  T G
Sbjct: 2788 GRKAAPEEARPAPGLGPGAYNNTALFEESGLIRITLG 2824

>O24308:TOP2_PEA DNA topoisomerase 2 - Pisum sativum (Garden pea)|
          Length = 1462

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +2

Query: 230  GGKKPAEEETKPAPATGPVCFKKPAGEDAGILETTKGY-LKQLGD--TNADTHWDCIKNR 400
            GG+KPA +  K APA  P   K PA      + T +    K L D    A+      + +
Sbjct: 1311 GGRKPAAQNAKKAPAKAPA--KAPAAPKKRSVGTKQSAGQKLLTDMLQPAEGTGTSPEKK 1368

Query: 401  VRAAREY-ISSKTSSAFGRQKVEPEAKEETPVAKPETAPAATESQ*SRPEHVIVFDEP 571
            VR  RE   + K+ S  GR      AK+ +P+A   +A +A+ +  S  E V +  +P
Sbjct: 1369 VRKMRESPFNKKSGSILGRAAA---AKDISPIADC-SAGSASNTPLSEDEVVEIAPQP 1422

>P03211:EBNA1_EBV Epstein-Barr nuclear antigen 1 - Epstein-Barr virus (strain B95-8)|
           (HHV-4) (Human herpesvirus 4)
          Length = 641

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 298 AGGRGRRHPGDHQGLP-QAARGHQRRHALGLHQEQGPRRPR 417
           +GGRGR   G  +G   + ARG  R  A G  + +G +RPR
Sbjct: 342 SGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPR 382


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 113,106,188
Number of extensions: 2316997
Number of successful extensions: 7530
Number of sequences better than 10.0: 10
Number of HSP's gapped: 7518
Number of HSP's successfully gapped: 10
Length of query: 273
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 162
Effective length of database: 70,239,694
Effective search space: 11378830428
Effective search space used: 11378830428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)