ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf146b10 |
|---|---|
| Clone Library Name | barley_pub |
>Q6J163:5NG4_PINTA Auxin-induced protein 5NG4 - Pinus taeda (Loblolly pine)| Length = 410 Score = 207 bits (527), Expect = 1e-52 Identities = 111/347 (31%), Positives = 181/347 (52%), Gaps = 1/347 (0%) Frame = +3 Query: 249 RLRMWEDKAWRAHAAMAFTQLAYGGYHVLTKSVLNVGMNQIVFCVYRDXXXXXXXXXXXF 428 R ++ + + HAAM Q Y G+H+++++ LN+G++++VF VYR+ + Sbjct: 8 RCNVFMSERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAY 67 Query: 429 FRERRVRRPVTPQLLGSFALLGFTGIFGNQXXXXXXXXXTNASYAAAFQPAIPVFTFLLA 608 F E++ R +T L F LL GI G ++A+A Q ++P TF++A Sbjct: 68 FLEKKERPALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMA 127 Query: 609 AIVGVEVINVFTKDGVFKVVGTAVCVFGAVLMVFYRGPSLIXXXXXXXXXXXXXXXXSWS 788 A + +E +++ +DG+ K++GT CV GA ++ Y+GP I ++ Sbjct: 128 AALRLEKVHISRRDGLAKIIGTVACVSGATIITLYKGPP-ITHIWRPNLEVTASYFKAFQ 186 Query: 789 GSSYPAQWLTPAMLQFDLGTWNLGVLCLLGNCFLMGAYLVIQAPVLVKYPASLSLTAYSY 968 G+ A+ W LG + LLGNC ++V+QAPVL +YPA LS+T+++ Sbjct: 187 GNDLSAK----------SENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTC 236 Query: 969 SFATIFMVLTGVFATNGLHEWAL-TGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVA 1145 F I ++ F L W + +G E+ ILYAG VAS + +++ W GP VA Sbjct: 237 FFGVIQFLIIAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVA 296 Query: 1146 LYNPLQPACSTILSTMFLGTPIYLGSLIGGVFIIAGLYLVTWARYNE 1286 +Y P+Q I++++ LG YLG + G + II GLYLV W + E Sbjct: 297 VYQPVQTIAVAIMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEE 343
>O29740:Y510_ARCFU Uncharacterized transporter AF_0510 - Archaeoglobus fulgidus| Length = 289 Score = 53.9 bits (128), Expect = 2e-06 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 1/148 (0%) Frame = +3 Query: 828 LQFDLGTWNLGVLCLLGNCFLMGAYLVIQAPVLVKYPASLSLTAYSYSFATIFMVLTGVF 1007 L+F G + ++ + FL Y V+ + +L+KY +LTAY+++ TIF++ + Sbjct: 140 LEFFSSKTIFGDVLMIVDGFLWAVYTVLGSKMLLKYDHE-TLTAYAFALGTIFLIPFALM 198 Query: 1008 ATNGLHEWALTGTEMIA-ILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTIL 1184 + G E +A +LY ++ S Y + +A + VA+Y L P + I Sbjct: 199 S--GFANPVTFNPETVAALLYLSILCSVFAYVVWYYALTNADSTSVAVYVYLVPLFTAIF 256 Query: 1185 STMFLGTPIYLGSLIGGVFIIAGLYLVT 1268 + L + IGG+ IAG+YL T Sbjct: 257 AFYALNEKPDFFTAIGGIITIAGVYLTT 284
>P38943:YCAY_CLOKL Uncharacterized transporter in cat1 5'region - Clostridium kluyveri| Length = 311 Score = 40.0 bits (92), Expect = 0.034 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Frame = +3 Query: 870 LLGNCFLMGA------YLVIQAPVLVKYPASLSLTAYSYSFATIFMVLTGVFATNGLHEW 1031 L+G CF + A Y VI + Y + S+ F I +++ V + Sbjct: 155 LIGICFALVAAVVWSLYTVISKKRIEIYGGYV-FNCISFFFGVIALLILLVVTGRPIFS- 212 Query: 1032 ALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTILSTMFLGTPI 1211 +T ++ +LY G+ + Y A K + ++PA +T+L+ + LG I Sbjct: 213 GITLNNILVLLYMGIFIKAVGYICYLGAIKETSAVTASTVFLIKPALATVLAILILGESI 272 Query: 1212 YLGSLIGGVFIIAG 1253 + +IG VFII G Sbjct: 273 EVNVVIGIVFIIIG 286
>P39649:YWFM_BACSU Uncharacterized transporter ywfM - Bacillus subtilis| Length = 296 Score = 37.0 bits (84), Expect = 0.29 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 4/143 (2%) Frame = +3 Query: 858 GVLCLLGNCFLMGAYLVIQAPVLVKYPASLSLTAYSYSFATIFMVLTGVFATNGLHE--- 1028 GVL LG Y +I ++ P + A +FM+ + + T L + Sbjct: 149 GVLMALGAGASFAGYTLISKAMMKTQPPRATS-------AVVFMI-SAILLTPLLWQLDI 200 Query: 1029 -WALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTILSTMFLGT 1205 W LT + LY G++A+C Y + + S + +P +++L F+G Sbjct: 201 SWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAVTLSLAEPLTASLLGVFFIGE 260 Query: 1206 PIYLGSLIGGVFIIAGLYLVTWA 1274 + S +G ++ GL +++ A Sbjct: 261 MLSPSSWLGIALMMLGLLVISAA 283
>O28720:Y1552_ARCFU Uncharacterized transporter AF_1552 - Archaeoglobus fulgidus| Length = 270 Score = 37.0 bits (84), Expect = 0.29 Identities = 17/67 (25%), Positives = 35/67 (52%) Frame = +3 Query: 1071 GVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTILSTMFLGTPIYLGSLIGGVFIIA 1250 GVV + + + + ++ K + + ++P C+ ++ + G + L LIGG I+A Sbjct: 203 GVVPTAVPFVLFSYGMKYVKVQRAPILALIEPLCAGLVGYFYFGETLTLTQLIGGAMILA 262 Query: 1251 GLYLVTW 1271 G+ L+ W Sbjct: 263 GV-LIAW 268
>P34854:NU5M_ANOGA NADH-ubiquinone oxidoreductase chain 5 - Anopheles gambiae (African| malaria mosquito) Length = 580 Score = 37.0 bits (84), Expect = 0.29 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 10/154 (6%) Frame = +3 Query: 849 WNLGVLCLLGNCFLMGAYL--VIQAPVLVKYPASLSLTAY--------SYSFATIFMVLT 998 +N+ L L G FL G Y +I V++ Y S + YSF ++ +T Sbjct: 346 FNVANLALCGMPFLAGFYSKDLILEMVMLSYVNVFSFFLFFFSTGLTVCYSFRLVYYSMT 405 Query: 999 GVFATNGLHEWALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACST 1178 G F ++ LH +G M+ + V + + ++++W L P+++ L PL+ T Sbjct: 406 GDFNSSSLHPLNDSGWTMLFSICFLTVMAVIGGSMLSWL-MFLNPAMICL--PLEMKLLT 462 Query: 1179 ILSTMFLGTPIYLGSLIGGVFIIAGLYLVTWARY 1280 + + G YL S + F LY + + Sbjct: 463 LFVCIVGGLMGYLISDVKLFFTNKALYFYNFTNF 496
>O31448:YBFH_BACSU Uncharacterized transporter ybhF - Bacillus subtilis| Length = 306 Score = 36.6 bits (83), Expect = 0.38 Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 2/138 (1%) Frame = +3 Query: 855 LGVLCLLGNCFLMGAYLVIQAPVLVKYPASLSLTAYSYSFATIFMVLTGVFATNGLHEWA 1034 LG + G + G Y + + + LT + + +FMV +F + + + Sbjct: 152 LGDIMAAGAALVFGGYSIFMKKLSAYEYHIIELTQRVFLYGLLFMV-PALFLFDFHFDLS 210 Query: 1035 L--TGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTILSTMFLGTP 1208 + + ++ +L+ G+ AS L +A ++ +LG + Y + P + S + L Sbjct: 211 RFSSASNILNMLFLGIGASALCFATWNYSVGVLGAVKSSAYIYMVPVITIAASVLILHEN 270 Query: 1209 IYLGSLIGGVFIIAGLYL 1262 + +L+GG + GLY+ Sbjct: 271 MTWIALLGGALTLLGLYI 288
>P33510:NU5M_ANOQU NADH-ubiquinone oxidoreductase chain 5 - Anopheles quadrimaculatus| (Mosquito) Length = 576 Score = 36.6 bits (83), Expect = 0.38 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 10/154 (6%) Frame = +3 Query: 849 WNLGVLCLLGNCFLMGAYL--VIQAPVLVKYPASLSLTAY--------SYSFATIFMVLT 998 +N+ L L G FL G Y +I V + Y S + YSF ++ +T Sbjct: 342 FNVANLALCGMPFLAGFYSKDLILEMVSLSYVNVFSFFLFFFSTGLTVCYSFRLVYYSMT 401 Query: 999 GVFATNGLHEWALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACST 1178 G F ++ LH +G M+ ++ ++ + + ++++W L PS++ L L+ Sbjct: 402 GDFNSSVLHPLNDSGWTMLFSIFFLMIMAVIGGSMLSWL-MFLNPSMICLPFDLK----- 455 Query: 1179 ILSTMFLGTPIYLGSLIGGVFIIAGLYLVTWARY 1280 + T+F+ LG LIG + L+ A Y Sbjct: 456 -MLTLFV---CILGGLIGYLLSNVSLFFTNKALY 485
>P81327:YD3A_METJA Uncharacterized protein MJ1333.1 - Methanococcus jannaschii| Length = 137 Score = 33.5 bits (75), Expect = 3.2 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 21/127 (16%) Frame = +3 Query: 951 LTAYSYSFATIFMVLTGVFATNGLHEWALTGTE------MIAILYAGVVAS---CLNYAI 1103 L A Y T F + V N L +W + +I + Y ++ + L YAI Sbjct: 10 LVAVFYGVGTFFAKI--VCEKNPLFQWIVVNIVGIILCLIILLKYKNIIITDQKILTYAI 67 Query: 1104 MTWANKILGPSLV--ALYN-------PLQ---PACSTILSTMFLGTPIYLGSLIGGVFII 1247 ++ ++G L+ ALY PL PA + LS +FL + L +IG V II Sbjct: 68 ISAVLVVIGSLLLYYALYKGKASIVVPLSSIGPAITVALSILFLKETLTLPQMIGIVLII 127 Query: 1248 AGLYLVT 1268 G+ L++ Sbjct: 128 IGIILLS 134
>P42194:PECM_DICD3 Protein pecM - Dickeya dadantii (strain 3937) (Erwinia chrysanthemi| (strain 3937)) Length = 297 Score = 33.5 bits (75), Expect = 3.2 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = +3 Query: 1035 LTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACSTILSTMFLGTPIY 1214 +T T + LY + S L Y + + P +++L L P + +L +FL + Sbjct: 198 VTLTNLAGYLYLAIPGSLLAYFMWFSGLEANSPVIMSLLGFLSPLVALLLGFLFLQQGLS 257 Query: 1215 LGSLIGGVFIIAGLYLV 1265 L+G VFI + L +V Sbjct: 258 GAQLVGVVFIFSALIIV 274
>Q07835:YXXF_BACSU Uncharacterized transporter yxxF - Bacillus subtilis| Length = 311 Score = 33.1 bits (74), Expect = 4.2 Identities = 24/97 (24%), Positives = 42/97 (43%) Frame = +3 Query: 999 GVFATNGLHEWALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVALYNPLQPACST 1178 G FA W I ++ G++ + + Y + + + L +++ L PA + Sbjct: 209 GAFADLSQGNW-------IMVVSTGIIHTGIVYLLFFDSLRFLSTKFISIIVFLDPAVAI 261 Query: 1179 ILSTMFLGTPIYLGSLIGGVFIIAGLYLVTWARYNEA 1289 +L T+F G L +G V I AG+ L R +A Sbjct: 262 VLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRRQGKA 298
>Q14432:PDE3A_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase A - Homo sapiens| (Human) Length = 1141 Score = 33.1 bits (74), Expect = 4.2 Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 2/200 (1%) Frame = +3 Query: 789 GSSYPAQWLTPAMLQFDLGTWNLGVLCLLGNCFLMGAYLVIQAPVLVKYPASLSLTAYSY 968 G + + WL P+ L F L LC F MG YL+ V+ P +++L A Sbjct: 122 GGARLSPWLQPSALLFSL-------LCAF---FWMGLYLLRAG---VRLPLAVALLAACC 168 Query: 969 SFATIFMVLTGVFATNGLHEWALTGTEMIAILYAGVVASCLNYAIMTWANKILGPSLVAL 1148 + + GV + ++++ AGVV SCL A LG ++AL Sbjct: 169 GGEALVQIGLGVGEDH-----------LLSLPAAGVVLSCLAAATWLVLRLRLGVLMIAL 217 Query: 1149 YNPLQPACSTILSTMFLGTPIYLGSLIGGVFIIAGLYL--VTWARYNEAQRILMSGYLNP 1322 + ++ L + YL L G + I+ Y+ + A R + L Sbjct: 218 TSAVRTVSLISLERFKVAWRPYLAYLAGVLGILLARYVEQILPQSAEAAPREHLGSQL-- 275 Query: 1323 LLVEVEDAPAPKTQQSSSSI 1382 + ED P K ++ SSS+ Sbjct: 276 IAGTKEDIPVFKRRRRSSSV 295
>Q20787:S35B3_CAEEL Solute carrier family 35 member B3 homolog - Caenorhabditis elegans| Length = 364 Score = 32.0 bits (71), Expect = 9.4 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 12/135 (8%) Frame = +3 Query: 909 IQAPVLVKYPASLS-LTAYSYSFATIFM----VLTG-VFATNGL---HEWALTGTEMIAI 1061 IQ + KY S + + YSY ++F+ VL+G VF+ + W G Sbjct: 206 IQEKNMKKYGGSSNEMVLYSYGIGSVFIFAFVVLSGEVFSAIPFFLENSWKTFG------ 259 Query: 1062 LYAGVVASCLNYA---IMTWANKILGPSLVALYNPLQPACSTILSTMFLGTPIYLGSLIG 1232 YA ++ SCL Y ++ K+ G + L+ A + ILS M P + + Sbjct: 260 -YA-LILSCLGYLGVNVVLTHIKVFGALVAVTVTTLRKALTIILSFMLFSKPFTIEYVYA 317 Query: 1233 GVFIIAGLYLVTWAR 1277 G ++ +YL +++ Sbjct: 318 GSVVMLAIYLNLYSK 332
>Q8Z075:NU6C_ANASP NAD(P)H-quinone oxidoreductase chain 6 - Anabaena sp. (strain PCC| 7120) Length = 202 Score = 32.0 bits (71), Expect = 9.4 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 11/62 (17%) Frame = +3 Query: 1179 ILSTMFLGTP---------IYLGSLIGGVFI-IAGLYLVTWARYNEAQRILM-SGYLNPL 1325 IL+TM +GT +Y L+GGVFI IAG+YL+ + A ++L+ G +N L Sbjct: 14 ILATMLIGTALGVVLATSIVYSAFLLGGVFISIAGMYLLLNGDFVAAAQVLVYVGAVNVL 73 Query: 1326 LV 1331 ++ Sbjct: 74 IL 75 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 267,604,263 Number of extensions: 5357265 Number of successful extensions: 15119 Number of sequences better than 10.0: 14 Number of HSP's gapped: 15113 Number of HSP's successfully gapped: 14 Length of query: 640 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 520 Effective length of database: 67,771,039 Effective search space: 35240940280 Effective search space used: 35240940280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
