| Clone Name | FLbaf130p19 |
|---|---|
| Clone Library Name | barley_pub |
>Q42533:BCCP_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor - Arabidopsis thaliana (Mouse-ear cress) Length = 280 Score = 38.5 bits (88), Expect = 0.15 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = +1 Query: 1708 PNTGMYYIPMQRPNAP---QQYTIPAGAVAPMAAPTIVDSAPKPTVPIPQQYMKPELQQP 1878 P Y+ MQ+PN P QQ PA A AP+ S P P+ P P + P ++ P Sbjct: 150 PQAPASYVMMQQPNQPSYAQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSP 209
>Q32N93:INCEB_XENLA Inner centromere protein B - Xenopus laevis (African clawed frog)| Length = 892 Score = 34.7 bits (78), Expect = 2.2 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 3/101 (2%) Frame = +1 Query: 670 ASVNCLLGLED---DNASQHSRSGVQNSGPAEDQRASQQKLXXXXXXXXRHQHDVQSVPD 840 AS+ C +E ++ SQ + VQ ++R+++QKL + DVQ +P+ Sbjct: 130 ASIMCPPAVEQALPESPSQLCQKSVQVKISEHERRSAEQKLRESEIEDSEMKTDVQPIPE 189 Query: 841 SPMLDKNSSFGSTSSAPSLSNLPPIRVRPEDRQPLAPPVSV 963 D S + + P + ++P + V PE++ A + + Sbjct: 190 ITK-DHISEIMNAAGPPPIPDIPAVPVTPENKSRAAGKLKI 229
>Q24255:BARH1_DROME Homeobox protein B-H1 - Drosophila melanogaster (Fruit fly)| Length = 544 Score = 34.7 bits (78), Expect = 2.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 Query: 2054 HRSSTLRQEHHQHHCHLSISSP 2119 H STL+Q+HHQHH H + P Sbjct: 24 HHLSTLQQQHHQHHLHYGLQPP 45
>Q9EQJ4:ZN384_RAT Zinc finger protein 384 - Rattus norvegicus (Rat)| Length = 579 Score = 33.9 bits (76), Expect = 3.7 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Frame = +1 Query: 2041 ADPRAQVFYSQAGA------PPASLPPQYQQPMGAPDASGQADMNQN 2163 A +AQ SQA PP PP +Q P AP G D NQN Sbjct: 495 AQAQAQAQASQASQQQQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQN 541
>Q4R3F0:LRRC6_MACFA Leucine-rich repeat-containing protein 6 - Macaca fascicularis (Crab| eating macaque) (Cynomolgus monkey) Length = 466 Score = 33.9 bits (76), Expect = 3.7 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = -3 Query: 2514 DKQLEL*SNTSFTGLLPPQLNATSANGLSRTKRKLPQTQQH---KNQHSTILILFWTEPL 2344 DK + SN F G +NAT ++ S+ + P T++H K +S + FW +P Sbjct: 195 DKNEDKRSNAGFDGRWYTDINATLSSLESKDHLQAPDTEEHNTKKLDNSEDDLEFWNKPC 254 Query: 2343 ITTPDECL 2320 + TP+ L Sbjct: 255 LFTPESRL 262
>Q86X45:LRRC6_HUMAN Leucine-rich repeat-containing protein 6 - Homo sapiens (Human)| Length = 466 Score = 33.9 bits (76), Expect = 3.7 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = -3 Query: 2514 DKQLEL*SNTSFTGLLPPQLNATSANGLSRTKRKLPQTQQH---KNQHSTILILFWTEPL 2344 DK + SN F G +NAT ++ S+ + P T++H K +S + FW +P Sbjct: 195 DKNEDKRSNAGFDGRWYTDINATLSSLESKDHLQAPDTEEHNTKKLDNSEDDLEFWNKPC 254 Query: 2343 ITTPDECL 2320 + TP+ L Sbjct: 255 LFTPESRL 262
>Q9SFU0:SC24A_ARATH Protein transport protein Sec24-like At3g07100 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1038 Score = 33.1 bits (74), Expect = 6.3 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +1 Query: 2017 NYGYPEYAADPRAQVFYSQAGAPPASLPPQYQQPMGAPDASG 2142 N GYP + A P + F A APP +PPQ P +A G Sbjct: 5 NQGYPNFPARPASSPF---ASAPPPGIPPQSGGPPTGSEAVG 43
>Q9C035:TRIM5_HUMAN Tripartite motif-containing protein 5 - Homo sapiens (Human)| Length = 493 Score = 32.7 bits (73), Expect = 8.3 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 Query: 1145 GVGCSSHQSRRFHLPSTPTTGPCSTMIC 1228 GV CS+ Q FH PS P P S +IC Sbjct: 407 GVKCSAFQDSSFHTPSVPFIVPLSVIIC 434
>O21241:NDUS1_RECAM NADH-ubiquinone oxidoreductase 75 kDa subunit - Reclinomonas| americana Length = 691 Score = 32.7 bits (73), Expect = 8.3 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -1 Query: 2570 DSEVFTELFRQLYIYSKIKTSNWNCNPTLHSQA 2472 D EL + L+ Y++IKTSNWN LH+ A Sbjct: 466 DGTSIIELVKTLFKYTQIKTSNWNGFNILHTSA 498
>Q13164:MK07_HUMAN Mitogen-activated protein kinase 7 - Homo sapiens (Human)| Length = 815 Score = 32.7 bits (73), Expect = 8.3 Identities = 20/48 (41%), Positives = 24/48 (50%) Frame = +1 Query: 1735 MQRPNAPQQYTIPAGAVAPMAAPTIVDSAPKPTVPIPQQYMKPELQQP 1878 M RP AP ++PA A AP PT V +PT P P +P QP Sbjct: 574 MARPAAPALTSVPAPAPAPTPTPTPV----QPTSPPPGPLAQPTGPQP 617 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 375,897,952 Number of extensions: 8061926 Number of successful extensions: 26680 Number of sequences better than 10.0: 10 Number of HSP's gapped: 26543 Number of HSP's successfully gapped: 10 Length of query: 910 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 788 Effective length of database: 67,222,449 Effective search space: 52971289812 Effective search space used: 52971289812 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)