ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf132i17 |
|---|---|
| Clone Library Name | barley_pub |
>Q93VG8:U326_ARATH UPF0326 protein At4g17486 - Arabidopsis thaliana (Mouse-ear cress)| Length = 224 Score = 255 bits (652), Expect = 3e-67 Identities = 113/197 (57%), Positives = 154/197 (78%), Gaps = 1/197 (0%) Frame = +3 Query: 420 VYLNIYDISPINNYLYWFGLGIFHSAVEVHGMEFGYGAHEYATSGVFQVEPKSCPGFIFR 599 VYLN+YD++P+NNYLYWFG+GIFHS +E H +E+ YGAHEY TSGV++VEP++CPGFIFR Sbjct: 28 VYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFR 87 Query: 600 RSVCMGTTNMSRAEVRTFLEDLAEDYHGDTYHLIVKNCNHFTADVCKRLTGKPTPGWVNR 779 RSV +GTT+MSR++ R+++E L+ YHGDTYHLI KNCNHFT +VC +LTGKP PGW+NR Sbjct: 88 RSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINR 147 Query: 780 LARLGSVCNCVLPENIKVSAVRDETAHLEFSD-DDLESDTSMVDDSDIGDLDHLLTTPNS 956 LAR+GS CNC+LPE+I+++AV LEFSD D+ S+ S V D + G HL+ + Sbjct: 148 LARVGSFCNCLLPESIQLTAVSALPERLEFSDEDESNSEASSVSDEE-GSEQHLINVADR 206 Query: 957 DVIPPKDKTLTPGRESL 1007 +++ ++K + RE + Sbjct: 207 EIVYLQNKPVRLTREEI 223
>Q5R456:CA121_PONPY UPF0326 protein C1orf121 homolog - Pongo pygmaeus (Orangutan)| Length = 194 Score = 120 bits (301), Expect = 1e-26 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Frame = +3 Query: 420 VYLNIYDISPINNYLYWFGLGIFHSAVEVHGMEFGYGAHEYATSGVFQVEPKSCPG---- 587 V LN+YD+ +N Y G+G+FHS +EV+G EF YG H Y SG+F++ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 588 FIFRRSVCMGTTNMSRAEVRTFLEDLAEDYHGDTYHLIVKNCNHFTADVCKRLTGKPTPG 767 F F+ +V +G+T+ ++ +E+L ++Y G+ YHL+ KNCNHF++ + + L GK P Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 768 WVNRLARLGS---VCNCVLPENIKVSAVRDETAHLEFSDDDLESDTSMVDDS 914 W+NRLA S LP+ A + E D+ E++ + S Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASAS 178
>Q9BSY9:CA121_HUMAN UPF0326 protein C1orf121 - Homo sapiens (Human)| Length = 194 Score = 120 bits (301), Expect = 1e-26 Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Frame = +3 Query: 420 VYLNIYDISPINNYLYWFGLGIFHSAVEVHGMEFGYGAHEYATSGVFQVEPKSCPG---- 587 V LN+YD+ +N Y G+G+FHS +EV+G EF YG H Y SG+F++ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 588 FIFRRSVCMGTTNMSRAEVRTFLEDLAEDYHGDTYHLIVKNCNHFTADVCKRLTGKPTPG 767 F F+ +V +G+T+ ++ +E+L ++Y G+ YHL+ KNCNHF++ + + L GK P Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 768 WVNRLARLGS---VCNCVLPENIKVSAVRDETAHLEFSDDDLESDTSMVDDS 914 W+NRLA S LP+ A + E D+ E++ + S Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASAS 178
>Q9D291:CA121_MOUSE UPF0326 protein C1orf121 homolog - Mus musculus (Mouse)| Length = 194 Score = 120 bits (300), Expect = 2e-26 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%) Frame = +3 Query: 420 VYLNIYDISPINNYLYWFGLGIFHSAVEVHGMEFGYGAHEYATSGVFQVEPKSCPG---- 587 V LN+YD+ +N Y G+G+FHS +EV+G EF YG H Y SG+F++ P + Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66 Query: 588 FIFRRSVCMGTTNMSRAEVRTFLEDLAEDYHGDTYHLIVKNCNHFTADVCKRLTGKPTPG 767 F F+ +V +G+T+ ++ +E+L ++Y G+ YHL+ KNCNHF++ + + L GK P Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126 Query: 768 WVNRLARLGS---VCNCVLPENIKVSAVRDETAHLEFSDDDLESD 893 W+NRLA S LP+ A + E D+ E++ Sbjct: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAE 171
>Q8X1T0:HAG1_SCHPO UPF0326 protein hag1 - Schizosaccharomyces pombe (Fission yeast)| Length = 201 Score = 101 bits (251), Expect = 8e-21 Identities = 56/174 (32%), Positives = 100/174 (57%), Gaps = 9/174 (5%) Frame = +3 Query: 420 VYLNIYDI---SPINNYLYWFGLGIFHSAVEVHGMEFGYGAHEY-ATSGVFQVEPKS-CP 584 VY+N+YD+ SP+N + GLGI+H+ + + G E+ +GAHE ++GVF P+ Sbjct: 3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLE 62 Query: 585 GFIFRRSVCMGTTNMSRAEVRTFLEDLAEDYHGDTYHLIVKNCNHFTADVCKRLTGKPTP 764 G +R S+ + + + +V L L++++ G +Y L+ +NCNHFT LTG P P Sbjct: 63 GCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIP 122 Query: 765 GWVNRLARLG----SVCNCVLPENIKVSAVRDETAHLEFSDDDLESDTSMVDDS 914 ++NR++R+G ++ N +L K ++ D+++ S D++ +T +V S Sbjct: 123 SFLNRISRIGLAFPTITNALLQHGQKNTSDVDDSSD---SSSDVDEETLIVSKS 173
>Q04589:FGFR1_RAT Basic fibroblast growth factor receptor 1 precursor - Rattus| norvegicus (Rat) Length = 822 Score = 33.1 bits (74), Expect = 2.8 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = -3 Query: 1250 ISHVPCWLTWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGTTAKI 1071 +SH WLT ++P + PLY+ I IY S V + +I K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMVGSVIIYKMKSGTKKSD 407 Query: 1070 SHPQQTTQK 1044 H Q K Sbjct: 408 FHSQMAVHK 416
>P11362:FGFR1_HUMAN Basic fibroblast growth factor receptor 1 precursor - Homo sapiens| (Human) Length = 822 Score = 32.7 bits (73), Expect = 3.7 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = -3 Query: 1250 ISHVPCWLTWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGTTAKI 1071 +SH WLT ++P + PLY+ I IY S V + ++ K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMVGSVIVYKMKSGTKKSD 407 Query: 1070 SHPQQTTQK 1044 H Q K Sbjct: 408 FHSQMAVHK 416
>Q5ABA6:ATG18_CANAL Autophagy-related protein 18 - Candida albicans (Yeast)| Length = 558 Score = 32.7 bits (73), Expect = 3.7 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +3 Query: 810 VLPENIKVSAVRDETAHLEFSDDDLESDTSMVDDSDIGDLDHLLTTPNSDVIPPKDKTLT 989 +L E + S ++T ++ + ++ E DDSD+ D D + + +VIP K + L+ Sbjct: 344 ILEEETEGSQSNEQTKSIKRNSEEFEDIRDDGDDSDVDDEDGDIDDESLEVIPAKQRKLS 403 Query: 990 PG 995 G Sbjct: 404 QG 405
>P66949:YFGC_SHIFL TPR repeat-containing protein yfgC precursor - Shigella flexneri| Length = 487 Score = 32.3 bits (72), Expect = 4.8 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = -3 Query: 1391 FFFFLYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV-PCWL 1227 F FFL +N EIN A + + LHS L N QL S M ISHV L Sbjct: 94 FHFFL-------INNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHL 146 Query: 1226 TWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGT-TAKISHPQQTT 1050 + PL ++ +I + +A+ G +++ T+ GT IS QQ Sbjct: 147 ARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTL-----AGTRQGMISFTQQNE 201 Query: 1049 QKQVMLFINNLKQ 1011 Q+ + I L++ Sbjct: 202 QEADRIGIQVLQR 214
>P66948:YFGC_ECOLI TPR repeat-containing protein yfgC precursor - Escherichia coli| Length = 487 Score = 32.3 bits (72), Expect = 4.8 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = -3 Query: 1391 FFFFLYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV-PCWL 1227 F FFL +N EIN A + + LHS L N QL S M ISHV L Sbjct: 94 FHFFL-------INNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHL 146 Query: 1226 TWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGT-TAKISHPQQTT 1050 + PL ++ +I + +A+ G +++ T+ GT IS QQ Sbjct: 147 ARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTL-----AGTRQGMISFTQQNE 201 Query: 1049 QKQVMLFINNLKQ 1011 Q+ + I L++ Sbjct: 202 QEADRIGIQVLQR 214
>P66950:YFGC_SALTY TPR repeat-containing protein yfgC precursor - Salmonella typhimurium| Length = 487 Score = 32.0 bits (71), Expect = 6.3 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = -3 Query: 1391 FFFFLYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV-PCWL 1227 F FFL +N EIN A + + LHS L N QL S M ISHV L Sbjct: 94 FHFFL-------INNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHL 146 Query: 1226 TWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGT-TAKISHPQQTT 1050 + PL ++ +I + +A+ G +++ T+ GT IS QQ Sbjct: 147 ARAMEDQKRSAPLTWVGALGSILLAMASPQAGMAALTGTL-----AGTRQGMISFTQQNE 201 Query: 1049 QKQVMLFINNLKQ 1011 Q+ + I L++ Sbjct: 202 QEADRIGIQVLQR 214
>P66951:YFGC_SALTI TPR repeat-containing protein yfgC precursor - Salmonella typhi| Length = 487 Score = 32.0 bits (71), Expect = 6.3 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = -3 Query: 1391 FFFFLYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV-PCWL 1227 F FFL +N EIN A + + LHS L N QL S M ISHV L Sbjct: 94 FHFFL-------INNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHL 146 Query: 1226 TWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGT-TAKISHPQQTT 1050 + PL ++ +I + +A+ G +++ T+ GT IS QQ Sbjct: 147 ARAMEDQKRSAPLTWVGALGSILLAMASPQAGMAALTGTL-----AGTRQGMISFTQQNE 201 Query: 1049 QKQVMLFINNLKQ 1011 Q+ + I L++ Sbjct: 202 QEADRIGIQVLQR 214
>Q8XAD2:YFGC_ECO57 TPR repeat-containing protein yfgC precursor - Escherichia coli| O157:H7 Length = 487 Score = 32.0 bits (71), Expect = 6.3 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = -3 Query: 1391 FFFFLYLHNKTIVNRHEINPTASYTNTIQLHSTL----KNNQQLQSTMHATISHV-PCWL 1227 F FFL +N EIN A + + LHS L N QL S M ISHV L Sbjct: 94 FHFFL-------INNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHL 146 Query: 1226 TWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGT-TAKISHPQQTT 1050 + PL ++ +I + +A+ G +++ T+ GT IS QQ Sbjct: 147 ARAMEDQQRNAPLTWVGALGSILLAMASPQAGMAALTGTL-----AGTRQGMISFTQQNE 201 Query: 1049 QKQVMLFINNLKQ 1011 Q+ + I L++ Sbjct: 202 QEADRIGIQVLQR 214
>P16092:FGFR1_MOUSE Basic fibroblast growth factor receptor 1 precursor - Mus musculus| (Mouse) Length = 822 Score = 32.0 bits (71), Expect = 6.3 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = -3 Query: 1250 ISHVPCWLTWPSPQLDKPHPLWYLPLYININIYVAATLTGSVSVSATVIRKEDTGTTAKI 1071 +SH WLT ++P + PLY+ I IY S + + +I K +GT Sbjct: 349 LSHHSAWLTVLEALEERP-AVMTSPLYLEIIIYCTGAFLISCMLGSVIIYKMKSGTKKSD 407 Query: 1070 SHPQQTTQK 1044 H Q K Sbjct: 408 FHSQMAVHK 416
>Q64237:DOPO_MOUSE Dopamine beta-hydroxylase precursor - Mus musculus (Mouse)| Length = 621 Score = 32.0 bits (71), Expect = 6.3 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -3 Query: 1262 MHATISHVPCWLTWPSPQLDKPHPLWYLPLYININIYVAATLTGS 1128 M A +SH PCW + PSP + + ++ + I + I VAA L GS Sbjct: 1 MQAHLSHQPCWSSLPSPSVREAASMYGTAVAIFLVILVAA-LRGS 44
>Q14669:TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP12 - Homo sapiens (Human)| Length = 1992 Score = 31.6 bits (70), Expect = 8.3 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = -3 Query: 1385 FFLYLHNKTIVNRHEINPTASYTNTIQLHSTLKNNQQLQSTMHATISHVPCWLTWPSPQL 1206 ++ YL++ + EI PT+ + N+ T K N+QLQ + ++P WLT +L Sbjct: 1484 YWYYLYDNAMCK--EIIPTSEFINS---KLTAKANRQLQDPLVIMTGNIPTWLT----EL 1534 Query: 1205 DKPHPLWY 1182 K P ++ Sbjct: 1535 GKTCPFFF 1542 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 220,631,949 Number of extensions: 4682414 Number of successful extensions: 13965 Number of sequences better than 10.0: 16 Number of HSP's gapped: 13942 Number of HSP's successfully gapped: 16 Length of query: 464 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 347 Effective length of database: 68,593,924 Effective search space: 23802091628 Effective search space used: 23802091628 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
