| Clone Name | FLbaf126d06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110487: | 31 | 0.53 | 2 | AK102183:Os12g0612700 | 30 | 1.2 | 3 | AK122185:Os04g0677000 | 28 | 3.5 | 4 | AK100020:Os09g0268600 | 28 | 4.5 | 5 | Os11g0689400:Os11g0689400 | 27 | 7.7 | 6 | AK121027:Os07g0655500 | 27 | 7.7 |
|---|
>AK110487: | Length = 523 Score = 30.8 bits (68), Expect = 0.53 Identities = 24/93 (25%), Positives = 37/93 (39%) Frame = -3 Query: 439 TGSSMYCTNTLTHTTRHMDQSIVHFTSRS*QEKRSHTPSRAADKTHHDSMRRARQQHRLG 260 T S +C M +S S + S H S ++ +QQH G Sbjct: 154 TSSETFCNVLRVGIEAAMGSCSSSNSSSSSSSHQQPAGSPTVSPARHRSFQQQQQQHP-G 212 Query: 259 GYMVLHPASRARASCLAGQRQTMQRMMAMITTS 161 G LHPA+ S LA Q + + A+++T+ Sbjct: 213 GLQALHPAAATLVSVLANP-QVLNLIDALVSTT 244
>AK102183:Os12g0612700 | Length = 855 Score = 29.6 bits (65), Expect = 1.2 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 334 HTPSRAADKTHHDSMRRARQQHRLGGYMVLHPASRAR--ASCLAGQRQTMQRMMAMITTS 161 H PS A T +S+ + Q H+ VLHP A A LA +T+ M+ T + Sbjct: 134 HNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGT 193 Query: 160 A 158 A Sbjct: 194 A 194
>AK122185:Os04g0677000 | Length = 368 Score = 28.1 bits (61), Expect = 3.5 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 436 GSSMYCTNTLTHTTRHMDQSIVHFTSR 356 G+ YC +T+ HT RH+ + I+ F + Sbjct: 202 GAGTYCMDTVKHTWRHVGEWILPFNGK 228
>AK100020:Os09g0268600 | Length = 440 Score = 27.7 bits (60), Expect = 4.5 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = -3 Query: 343 KRSHTPSRAADKTHHDSMRRARQQHRLGGYMVLHPASRARASCLAGQR 200 KRSH P A ++H S + H+ Y ++ +R L +R Sbjct: 328 KRSHEPENQAQRSHEPSSQDHINNHQPSSYQPINEGGTSRGRKLDSRR 375
>Os11g0689400:Os11g0689400 | Length = 2841 Score = 26.9 bits (58), Expect = 7.7 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = -3 Query: 397 TRHMDQSIVHFTSRS*QEKRSHTPSRAADKTHHDSMRRARQQHRLGGYMVLHPASRA 227 +R +S S S RS +PSR+ +++ AR+ G+ VL PA+ A Sbjct: 1124 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPRPRSGFDVLPPATGA 1180
>AK121027:Os07g0655500 | Length = 1447 Score = 26.9 bits (58), Expect = 7.7 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Frame = -2 Query: 377 NSTFHIEKLAGEKITHTEQGCRQN-------TPRQHETGAATTPTRRLHGA 246 N+ FH+ L G K+ E+G TP TGA ++H A Sbjct: 1009 NTGFHLPNLIGTKLLEDEEGSSSEERSFEAVTPEHEATGANEQEASQMHVA 1059 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,660,086 Number of extensions: 214717 Number of successful extensions: 613 Number of sequences better than 10.0: 6 Number of HSP's gapped: 613 Number of HSP's successfully gapped: 6 Length of query: 171 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 78 Effective length of database: 11,676,042 Effective search space: 910731276 Effective search space used: 910731276 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)