>Q9DHD6:POLG_HCVJP Genome polyprotein [Contains: Core protein p21 - Hepatitis C virus|
            genotype 2b (isolate JPUT971017) (HCV)
          Length = 3033
 Score = 32.3 bits (72), Expect = 3.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +1

Query: 661  EIDEDEEALMPESPYTRLLRRMGRYPDWYTPRPDHETD*ITPWTSLDFQMYNLKLCLLAP 840
            E+++D E  +P    TR  +     P W   RPD+    I  W   D++   +  C L P
Sbjct: 2261 EVEDDREPSVPSEYLTRRRKFPPALPPW--ARPDYNPPVIETWKRPDYEPPTVLGCALPP 2318

Query: 841  SMEA 852
            + +A
Sbjct: 2319 TPQA 2322

>Q99IB8:POLG_HCVJF Genome polyprotein [Contains: Core protein p21 - Hepatitis C virus|
            genotype 2a (isolate JFH-1) (HCV)
          Length = 3033

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = +1

Query: 604  QTAKPRPFPVPDGL-PKTQEEIDED----EEALMPESPYTRLLRRMGRYPDWYTPRPDHE 768
            QT      PV D L P  +EE D +     E ++P S + R L      P W   RPD+ 
Sbjct: 2243 QTEPESRVPVLDFLEPMAEEESDLEPSIPSECMLPRSGFPRAL------PAW--ARPDYN 2294

Query: 769  TD*ITPWTSLDFQMYNLKLCLLAPSMEA 852
               +  W   D+Q   +  C L P  +A
Sbjct: 2295 PPLVESWRRPDYQPPTVAGCALPPPKKA 2322

>Q9ULI3:HEG1_HUMAN Protein HEG homolog 1 precursor - Homo sapiens (Human)|
          Length = 1381

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 367  DQITDYCTTLEGDDCCSCWDAYFELNKLE 453
            D+ T  CT L+G   C C   YF+ NK++
Sbjct: 1185 DKDTSICTDLDGVALCQCKSGYFQFNKMD 1213

>O70367:LECT1_RAT Chondromodulin-1 precursor - Rattus norvegicus (Rat)|
          Length = 334

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 544 DLRKKMAEKAHNSAPSYSPGQTAKPRPFPVPDGLP-KTQEEIDEDEEALMPESPYTRLLR 720
           ++ ++  E   +SAPS +    ++PR    P  L  +T+  + +DEE   P++PY     
Sbjct: 208 EIPRERREVVRSSAPSTTRRPHSEPRGNAGPGRLSNRTRPSVQDDEEPFNPDNPY----H 263

Query: 721 RMGRYPDWYTPRPDHE 768
           +       + PR DHE
Sbjct: 264 QQEGESMTFDPRLDHE 279

>Q9ZJP4:TONB_HELPJ Protein tonB - Helicobacter pylori J99 (Campylobacter pylori J99)|
          Length = 280

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +1

Query: 538 RSDLRKKMAEKAHNSAPSYSPGQTAKPRPFPVPDGLPKTQEEIDEDEEALMPESP 702
           + + +K+  +K     P   P    KP+P P P+  PK + +++E ++    E P
Sbjct: 83  KEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKEEP 137

>Q8VC98:PKHA4_MOUSE Pleckstrin homology domain-containing family A member 4 - Mus|
           musculus (Mouse)
          Length = 588

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +1

Query: 598 PGQTAKPRPFPVPDGLPKTQEEIDEDEEALMPESP-YTRLLRRMGRYPDWYTPRP--DHE 768
           P   A+PRP   P G P    E++  EE  + ESP   RL R +GR+ + +TP    D +
Sbjct: 162 PRSPARPRPGEGPGG-PGGPPEVNRREEGRISESPEVARLSRGLGRH-ETHTPNSTVDLQ 219

Query: 769 TD 774
           TD
Sbjct: 220 TD 221

>Q9H4M7:PKHA4_HUMAN Pleckstrin homology domain-containing family A member 4 - Homo|
           sapiens (Human)
          Length = 779

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 598 PGQTAKPRPFPVPDGLPKTQEEIDEDEEALMPESP-YTRLLRRMGRYPDWYTPRP 759
           P   A+P+P   P G P    E+   EE  + ESP  TRL R  GR P   TP P
Sbjct: 162 PRSPARPQPGEGPGG-PGGPPEVSRGEEGRISESPEVTRLSRGRGR-PRLLTPSP 214

>Q5RA50:F124A_PONPY Protein FAM124A - Pongo pygmaeus (Orangutan)|
          Length = 546

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +1

Query: 529 IHHRSDLRKKMAEKAHNSAPSYSPGQTAK-----PRPFPVPDGLPKTQEEIDEDEEALMP 693
           +HH S+ ++        + PS++PG + +     P P P+  GLP   ++         P
Sbjct: 292 VHHSSEKKRHSTPLPSTAVPSHTPGSSQQSPLNSPHPGPIRTGLPPGHQQEFAGRANSTP 351

Query: 694 ESPYT 708
             P++
Sbjct: 352 NPPWS 356

>Q86V42:F124A_HUMAN Protein FAM124A - Homo sapiens (Human)|
          Length = 546

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +1

Query: 529 IHHRSDLRKKMAEKAHNSAPSYSPGQTAK-----PRPFPVPDGLPKTQEEIDEDEEALMP 693
           +HH S+ ++        + PS++PG + +     P P P+  GLP   ++         P
Sbjct: 292 VHHASEKKRHSTPLPSTAVPSHTPGSSQQSPLNSPHPGPIRTGLPPGHQQEFAGRANSTP 351

Query: 694 ESPYT 708
             P++
Sbjct: 352 NPPWS 356

>Q9BZE9:ASPC1_HUMAN Tether containing UBX domain for GLUT4 - Homo sapiens (Human)|
          Length = 553

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = +1

Query: 592 YSPGQTAKPRPFPVPDGLPKTQEEIDEDEEALMPESPY----TRLLRRMGRYPDW 744
           Y       P P P PD  PK++   +E   AL+P  P       + R +G+ P W
Sbjct: 493 YMSRAAGSPSPLPAPDPAPKSEPAAEEG--ALVPPEPIPGTAQPVKRSLGKVPKW 545

>Q9PR99:Y046_UREPA Uncharacterized protein UU046 - Ureaplasma parvum (Ureaplasma|
           urealyticum biotype 1)
          Length = 791

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +1

Query: 538 RSDLRKKMAEKAHNSAPSYSPGQTAKPRPFPVPDGLPKTQEEIDEDEEALMPESP 702
           + +L+K   +      P   P    KP+P P+P   P  +    + +E L+P SP
Sbjct: 100 KEELKKPEIKPEEPKKPEIKPEPIPKPKPQPIPQPTPPVE---TKPKEELLPPSP 151


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 170,143,039
Number of extensions: 3714203
Number of successful extensions: 14611
Number of sequences better than 10.0: 11
Number of HSP's gapped: 14490
Number of HSP's successfully gapped: 11
Length of query: 351
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 237
Effective length of database: 69,416,809
Effective search space: 16451783733
Effective search space used: 16451783733
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)