ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q0DQA9:CCD51_ORYSJ Cyclin-D5-1 - Oryza sativa subsp. japonica (R... 175 4e-43
2Q2QMW1:CCD52_ORYSJ Cyclin-D5-2 - Oryza sativa subsp. japonica (R... 142 3e-33
3Q2V3B2:CCD51_ARATH Cyclin-D5-1 - Arabidopsis thaliana (Mouse-ear... 60 2e-08
4Q10QA2:CCD53_ORYSJ Cyclin-D5-3 - Oryza sativa subsp. japonica (R... 60 3e-08
5P42751:CCD11_ARATH Cyclin-D1-1 - Arabidopsis thaliana (Mouse-ear... 52 8e-06
6P42753:CCD31_ARATH Cyclin-D3-1 - Arabidopsis thaliana (Mouse-ear... 50 2e-05
7Q6YXH8:CCD41_ORYSJ Cyclin-D4-1 - Oryza sativa subsp. japonica (R... 47 2e-04
8Q10K98:CCD23_ORYSJ Putative cyclin-D2-3 - Oryza sativa subsp. ja... 47 3e-04
9Q69QB8:CCD31_ORYSJ Cyclin-D3-1 - Oryza sativa subsp. japonica (R... 45 7e-04
10Q4KYM5:CCD42_ORYSJ Cyclin-D4-2 - Oryza sativa subsp. japonica (R... 45 0.001
11Q9SN11:CCD33_ARATH Cyclin-D3-3 - Arabidopsis thaliana (Mouse-ear... 43 0.003
12Q8LHA8:CCD22_ORYSJ Cyclin-D2-2 - Oryza sativa subsp. japonica (R... 43 0.003
13Q0J3H7:CCD32_ORYSJ Cyclin-D3-2 - Oryza sativa subsp. japonica (R... 42 0.006
14Q9FGQ7:CCD32_ARATH Cyclin-D3-2 - Arabidopsis thaliana (Mouse-ear... 42 0.006
15P42752:CCD21_ARATH Cyclin-D2-1 - Arabidopsis thaliana (Mouse-ear... 42 0.008
16Q0WQN9:CCD42_ARATH Cyclin-D4-2 - Arabidopsis thaliana (Mouse-ear... 40 0.031
17Q8LGA1:CCD41_ARATH Cyclin-D4-1 - Arabidopsis thaliana (Mouse-ear... 40 0.031
18Q8H339:CCD12_ORYSJ Cyclin-D1-2 - Oryza sativa subsp. japonica (R... 39 0.053
19Q67V81:CCD11_ORYSJ Cyclin-D1-1 - Oryza sativa subsp. japonica (R... 38 0.090
20Q53MB7:CCD71_ORYSJ Putative cyclin-D7-1 - Oryza sativa subsp. ja... 38 0.12
21O01501:CCNE_CAEEL G1/S-specific cyclin-E - Caenorhabditis elegans 37 0.20
22Q9ZR04:CCD61_ARATH Putative cyclin-D6-1 - Arabidopsis thaliana (... 37 0.20
23Q0J233:CCD21_ORYSJ Cyclin-D2-1 - Oryza sativa subsp. japonica (R... 36 0.45
24Q69S43:CCD61_ORYSJ Cyclin-D6-1 - Oryza sativa subsp. japonica (R... 34 1.7
25Q8MUK3:CCNE_CAEBR G1/S-specific cyclin-E - Caenorhabditis briggsae 33 2.2
26Q9LZM0:CCD71_ARATH Putative cyclin-D7-1 - Arabidopsis thaliana (... 33 2.2
27Q9Z0G7:ZBT22_MOUSE Zinc finger and BTB domain-containing protein... 32 6.5
28P16230:SRCH_RABIT Sarcoplasmic reticulum histidine-rich calcium-... 32 8.5
29Q5SCB5:CCND_OSTTA Cyclin-D - Ostreococcus tauri 32 8.5

>Q0DQA9:CCD51_ORYSJ Cyclin-D5-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 367
 Score =  175 bits (444), Expect = 4e-43
 Identities = 107/192 (55%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
 Frame = +2

Query: 287 LSEFRA---DDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXX 457
           LSEFRA   DD Y+FSC  IRRME+LVLSTLDWRM AVTPFDYLPCLSSRLRR       
Sbjct: 177 LSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRLRRH------ 230

Query: 458 XXXXXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTC 637
                       LIFSAAE ASVLD+RPST         THG LTRE LESK++ LSP+ 
Sbjct: 231 VGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHGALTREALESKMSGLSPSF 290

Query: 638 LLEKEDVYACYTMMLRDPSSP-SKTAKRPASDRSDGDSTYARLDAAS-------FSVAAA 793
           LL+KEDV+ACY+ ML  P+SP SK+       RS   S     DAAS          AAA
Sbjct: 291 LLDKEDVFACYSAMLSQPTSPASKSTTTTTGKRSSSSSCSESTDAASSYDATAASFPAAA 350

Query: 794 MNNNKRVRLELP 829
              +KR+RLELP
Sbjct: 351 SCGSKRMRLELP 362



 Score = 32.3 bits (72), Expect = 5.0
 Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = +2

Query: 176 MEAED-YAAGCCFSLMCQ 226
           MEAED Y+AGC FSLMCQ
Sbjct: 1   MEAEDEYSAGCSFSLMCQ 18



to top

>Q2QMW1:CCD52_ORYSJ Cyclin-D5-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 365

 Score =  142 bits (359), Expect = 3e-33
 Identities = 88/197 (44%), Positives = 115/197 (58%), Gaps = 14/197 (7%)
 Frame = +2

Query: 287 LSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFN------XX 448
           LSEF A     F  DSIRRME+LVLSTL WRMGAVTPFD+LPC SSRL R +        
Sbjct: 168 LSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAG 227

Query: 449 XXXXXXXXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTHGV-LTREPLESKINSL 625
                           IF+ AE  SVLDYRPST         ++G  LT+E LESK+++L
Sbjct: 228 HGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTKEALESKMSNL 287

Query: 626 SPTCLLEKEDVYACYTMMLRDPSSPSKTAKRPA----SDRSDGDSTYARL---DAASFSV 784
           SP+CL++KE+V+ACY+MM+ D ++  +++KRP     S+     STY  +   D    + 
Sbjct: 288 SPSCLIDKENVHACYSMMVGDMNNNRRSSKRPLQCSDSNEITTTSTYDSVLVDDVTDTAA 347

Query: 785 AAAMNNNKRVRLELPAV 835
            AA   NKR+R E P +
Sbjct: 348 FAATAMNKRLRPEPPRI 364



to top

>Q2V3B2:CCD51_ARATH Cyclin-D5-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 323

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
 Frame = +2

Query: 287 LSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXX 466
           LS++  D D+ F  D IR+ E+L+LSTLDW+M  +TPF Y     +++ + N        
Sbjct: 141 LSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLV 200

Query: 467 XXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTHGV-----LTREPLESKINSLSP 631
                     + +  +  S  +YR            +        LTRE + +K  S+S 
Sbjct: 201 LLRSSDS---LLALTKEISFTEYRQFVVAAVTTLLASSSTSSDIRLTREEIANKFGSISW 257

Query: 632 TCLLEKEDVYACYTMML-----------------RDPSSPSKTAKRPAS-DRSDGDSTYA 757
               E E+VY CY   L                 R+P +    AKR  S D SD  S  A
Sbjct: 258 WTSNENENVYLCYQRTLEIEERKHMTPPPEIAVSREPPASGSGAKRRLSFDDSDQSSPPA 317

Query: 758 R 760
           +
Sbjct: 318 K 318



to top

>Q10QA2:CCD53_ORYSJ Cyclin-D5-3 - Oryza sativa subsp. japonica (Rice)|
          Length = 345

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
 Frame = +2

Query: 287 LSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXX 466
           L EF+ D    + C S+ RME+LVL+TL W+M   TPF YL C +++ R           
Sbjct: 167 LPEFKLDM---YDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRH-------DER 216

Query: 467 XXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTH--GVLTREPLESKINSLSPTCL 640
                     IF++ +V S + Y+PST          +       + L+S + SL     
Sbjct: 217 KAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSVVGSLWQQ-- 274

Query: 641 LEKEDVYACYT-MMLRDPSSPSKTAKRPASDRS----DGDSTYARLDAASFSVAAAMNNN 805
           L+   VY+CY  MM+++  S   T +  +S  S     G    A   A + +   A  + 
Sbjct: 275 LDTGHVYSCYNKMMIQEDRSMQSTTEVASSGVSVAHIGGSEDSAMGGANNATTLEATPDK 334

Query: 806 KRVRLELP 829
           KR RL  P
Sbjct: 335 KRKRLHSP 342



to top

>P42751:CCD11_ARATH Cyclin-D1-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 339

 Score = 51.6 bits (122), Expect = 8e-06
 Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
 Frame = +2

Query: 314 YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXX 493
           Y F   +I+RME+LVLS LDWR+ +VTPFD++   +     +                  
Sbjct: 159 YLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFA-----YKIDPSGTFLGFFISHATE 213

Query: 494 LIFSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTC-LLEKEDVYACY 670
           +I S  + AS L+Y PS+          + + +   + +   S    C  L KE +  CY
Sbjct: 214 IILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCY 273

Query: 671 TMML------RDPSSPSKTAKRPASDRSDGDSTYAR-LDAASFSVAAAMNNNK 808
            +M          ++P   AK   S R+   ST  R  D +SFS ++     K
Sbjct: 274 RLMKAMAIENNRLNTPKVIAKLRVSVRA--SSTLTRPSDESSFSSSSPCKRRK 324



to top

>P42753:CCD31_ARATH Cyclin-D3-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 376

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
 Frame = +2

Query: 287 LSEFRADDD-YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXX 463
           L +F+ ++  Y F   +I+RME+L+LSTL+W+M  +TP  ++  +  RL   N       
Sbjct: 154 LLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN-----NA 208

Query: 464 XXXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTCLL 643
                     L+ S    +  + Y PS             V   +PL  + N L     L
Sbjct: 209 HWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLG-VLNL 267

Query: 644 EKEDVYACYTMMLRDPSSP-------SKTAKRPASDRSDG-DSTYARLDAASFSVAAAMN 799
            KE V  CY ++L+ P            + KR + D S   +S    +DA  F+   + N
Sbjct: 268 TKEKVKTCYDLILQLPVDRIGLQIQIQSSKKRKSHDSSSSLNSPSCVIDANPFNSDESSN 327

Query: 800 NN 805
           ++
Sbjct: 328 DS 329



to top

>Q6YXH8:CCD41_ORYSJ Cyclin-D4-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 356

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = +2

Query: 305 DDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           ++ Y F   +I+RME+LVLSTL WRM AVTPF Y+
Sbjct: 177 EERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYV 211



to top

>Q10K98:CCD23_ORYSJ Putative cyclin-D2-3 - Oryza sativa subsp. japonica (Rice)|
          Length = 405

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = +2

Query: 311 DYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           +Y F  ++I RME++VL+TL WRM AVTPF Y+
Sbjct: 182 EYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYI 214



to top

>Q69QB8:CCD31_ORYSJ Cyclin-D3-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 342

 Score = 45.1 bits (105), Expect = 7e-04
 Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
 Frame = +2

Query: 284 PLSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXX 463
           PL     D  Y F   +I+RME+ VL+ L WRM AVT   +   +   L +FN       
Sbjct: 157 PLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSF---IDYYLHKFN--DDDTP 211

Query: 464 XXXXXXXXXXLIFSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTCL- 640
                     LI S  +VA  L +RPS          +  ++  E  E+ +     TC  
Sbjct: 212 STSALSRSVDLILSTCKVAEFLVFRPS------EIAASVALVALEEHETSMFERVATCYK 265

Query: 641 -LEKEDVYACYTMM 679
            L+KE V  CY M+
Sbjct: 266 NLKKERVLRCYEMI 279



to top

>Q4KYM5:CCD42_ORYSJ Cyclin-D4-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 383

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 27/75 (36%), Positives = 36/75 (48%)
 Frame = +2

Query: 320 FSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXXLI 499
           F  ++I RME+LVL+ L+WRM AVTPF Y+     +L   N                 LI
Sbjct: 189 FEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGN-----AAPRSWLLRSSELI 243

Query: 500 FSAAEVASVLDYRPS 544
              A     L++RPS
Sbjct: 244 LRIAAGTGFLEFRPS 258



to top

>Q9SN11:CCD33_ARATH Cyclin-D3-3 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 361

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = +2

Query: 287 LSEFRADDD-YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDY 406
           L +F+ ++  Y F   +I+RME+LVLSTLDWRM  VTP  +
Sbjct: 153 LLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISF 193



to top

>Q8LHA8:CCD22_ORYSJ Cyclin-D2-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 356

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 281 LPLSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           LP+     D +Y F    I+RME++V+ TL WR+ AVTPF ++
Sbjct: 161 LPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFI 203



to top

>Q0J3H7:CCD32_ORYSJ Cyclin-D3-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 364

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +2

Query: 299 RADDD--YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           RAD +  Y F   ++RRME+LVLS L WRM  VTP  YL
Sbjct: 156 RADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194



to top

>Q9FGQ7:CCD32_ARATH Cyclin-D3-2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 367

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 15/191 (7%)
 Frame = +2

Query: 314 YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXX 493
           Y F   +I+RME+L+LSTL WRM  VTP  +   +   +RRF                  
Sbjct: 173 YLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHI---IRRFG--SKWHQQLDFCRKCER 227

Query: 494 LIFSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTCLLEKEDVYACYT 673
           L+ S       + Y PS             +   + +E + + ++    + +E V  CY 
Sbjct: 228 LLISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQ-SQITTLLKVNQEKVNECYE 286

Query: 674 MMLR------------DPSSPSKTAKRPASDRSDGD-STYARLDAASFSVAAAMNNNK-- 808
           ++L             D  SPS       S  S  + ST A + ++S S    +   +  
Sbjct: 287 LLLEHNPSKKRMMNLVDQDSPSGVLDFDDSSNSSWNVSTTASVSSSSSSPEPLLKRRRVQ 346

Query: 809 RVRLELPAVHR 841
             ++ LP+++R
Sbjct: 347 EQQMRLPSINR 357



to top

>P42752:CCD21_ARATH Cyclin-D2-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 361

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 16/35 (45%), Positives = 27/35 (77%)
 Frame = +2

Query: 305 DDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           D  + F   +I+RME+LV++TL+WR+ A+TPF ++
Sbjct: 171 DPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFI 205



to top

>Q0WQN9:CCD42_ARATH Cyclin-D4-2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 298

 Score = 39.7 bits (91), Expect = 0.031
 Identities = 35/128 (27%), Positives = 53/128 (41%)
 Frame = +2

Query: 320 FSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXXLI 499
           F   S++RME+LVL+ L WR+ AVTP  Y+    S++  ++                 +I
Sbjct: 148 FEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYD----QEPHSRLVTRSLQVI 203

Query: 500 FSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPTCLLEKEDVYACYTMM 679
            S  +    L++R S          +     +    S  +S      LEKE V     M+
Sbjct: 204 ASTTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSS------LEKERVKKIGEMI 257

Query: 680 LRDPSSPS 703
            RD SS S
Sbjct: 258 ERDGSSSS 265



to top

>Q8LGA1:CCD41_ARATH Cyclin-D4-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 308

 Score = 39.7 bits (91), Expect = 0.031
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +2

Query: 305 DDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           D  + F   S++RME+LVL+ L WR+ A+TP  Y+
Sbjct: 152 DPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYI 186



to top

>Q8H339:CCD12_ORYSJ Cyclin-D1-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 354

 Score = 38.9 bits (89), Expect = 0.053
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +2

Query: 305 DDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           D  Y F   +I RME+LVL  LDWR+ ++TPF ++
Sbjct: 189 DARYIFEHRTIFRMELLVLDALDWRLRSITPFTFM 223



to top

>Q67V81:CCD11_ORYSJ Cyclin-D1-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 363

 Score = 38.1 bits (87), Expect = 0.090
 Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
 Frame = +2

Query: 320 FSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXXLI 499
           F   +I+RME++VL  LDWR+ +VTPF ++   + ++                     +I
Sbjct: 203 FEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKV-----GSSGRSSRILALRACQII 257

Query: 500 FSAAEVASVLDYRPSTXXXXXXXXXTHGVLTREPLESKINSLSPT--CL-LEKEDVYACY 670
            SA      L++  S+          +         S ++S S    C+ L +E + +CY
Sbjct: 258 LSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASWCIGLTEERISSCY 317

Query: 671 TMMLRDPSSPSKTAKRPASDRSDGDSTYARLDAASFSVAAAMNNNKRVRLE 823
            ++ R  ++ ++  KR           +  + AA  SV ++ + +KR +L+
Sbjct: 318 QLLQRALNATARKRKR-----------HPMILAACSSVTSSSSRSKRRKLD 357



to top

>Q53MB7:CCD71_ORYSJ Putative cyclin-D7-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 320

 Score = 37.7 bits (86), Expect = 0.12
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 314 YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYLP 412
           + F   +IR ME+ +L  L WR+  VTPF +LP
Sbjct: 163 HSFRASTIRDMELTLLKALRWRLACVTPFSFLP 195



to top

>O01501:CCNE_CAEEL G1/S-specific cyclin-E - Caenorhabditis elegans|
          Length = 524

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +2

Query: 311 DYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           D  F+CD+IR MEVL++  + W +G +T   +L
Sbjct: 336 DSAFTCDNIRTMEVLIVKYIGWSLGPITSIQWL 368



to top

>Q9ZR04:CCD61_ARATH Putative cyclin-D6-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 302

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 24/75 (32%), Positives = 31/75 (41%)
 Frame = +2

Query: 320 FSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRLRRFNXXXXXXXXXXXXXXXXXLI 499
           F    I RME ++L  L WRM +VTPF +L    S L                     L 
Sbjct: 133 FDAQMIERMENVILGALKWRMRSVTPFSFLAFFIS-LFELKEEDPLLLKHSLKSQTSDLT 191

Query: 500 FSAAEVASVLDYRPS 544
           FS     S L+++PS
Sbjct: 192 FSLQHDISFLEFKPS 206



to top

>Q0J233:CCD21_ORYSJ Cyclin-D2-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 308

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 314 YDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           Y F   +I RME L+L+ L+WR+ +VTPF ++
Sbjct: 159 YVFEPRTICRMEFLILTALNWRLRSVTPFTFI 190



to top

>Q69S43:CCD61_ORYSJ Cyclin-D6-1 - Oryza sativa subsp. japonica (Rice)|
          Length = 320

 Score = 33.9 bits (76), Expect = 1.7
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 290 SEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           ++ +  +++ F    I+RME +VL+ L+WR  +VTP  +L
Sbjct: 127 ADIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFL 166



to top

>Q8MUK3:CCNE_CAEBR G1/S-specific cyclin-E - Caenorhabditis briggsae|
          Length = 518

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 290 SEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           ++  A  D  FSCD I RME +V   L W  G +T   +L
Sbjct: 329 ADLAALTDGAFSCDDICRMESIVAKDLKWSFGPITSVQWL 368



to top

>Q9LZM0:CCD71_ARATH Putative cyclin-D7-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 341

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 320 FSCDSIRRMEVLVLSTLDWRMGAVTPFDYLPCLSSRL 430
           F  +++ +ME+++L  L+WR+ AVT + +   L S++
Sbjct: 157 FHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKI 193



to top

>Q9Z0G7:ZBT22_MOUSE Zinc finger and BTB domain-containing protein 22 - Mus musculus|
           (Mouse)
          Length = 638

 Score = 32.0 bits (71), Expect = 6.5
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 291 RSSAPTTTMISAATPSAAWRCSCSPRSTGGWV 386
           RS+A TTT+ +AA PS +  C+  P   GG V
Sbjct: 151 RSAATTTTVTTAAAPSVSVPCASVPSGNGGTV 182



to top

>P16230:SRCH_RABIT Sarcoplasmic reticulum histidine-rich calcium-binding protein|
           precursor - Oryctolagus cuniculus (Rabbit)
          Length = 852

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 20/62 (32%), Positives = 24/62 (38%)
 Frame = -3

Query: 535 VVEHARHFGGGEDEGCGLDRDEXXXXXXXXAVESPEPGGEAREVVEGRDRTHPPVERGEH 356
           V  HA H  GGE+EG     +E            P PG  +R   EG    H     G H
Sbjct: 551 VPRHAHHGPGGEEEG---GEEELTVKAGHHVASHPPPGHRSR---EGHAEEHQTEVPGHH 604

Query: 355 EH 350
           +H
Sbjct: 605 QH 606



to top

>Q5SCB5:CCND_OSTTA Cyclin-D - Ostreococcus tauri|
          Length = 374

 Score = 31.6 bits (70), Expect = 8.5
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 287 LSEFRADDDYDFSCDSIRRMEVLVLSTLDWRMGAVTPFDYL 409
           +S+ R+     +S + IR+ME+ VL  L W +G +TP  +L
Sbjct: 173 MSKLRSWTSNMYSPEIIRKMELAVLIELGWDLGVLTPAHFL 213


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 189,313,565
Number of extensions: 3365288
Number of successful extensions: 9564
Number of sequences better than 10.0: 29
Number of HSP's gapped: 9555
Number of HSP's successfully gapped: 30
Length of query: 472
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 355
Effective length of database: 68,593,924
Effective search space: 24350843020
Effective search space used: 24350843020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top