| Clone Name | FLbaf108h14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063705.1| Oryza sativa (japonica cultivar-group) Os06g0220500 (Os06g0220500) mRNA, complete cds Length = 1808 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 50 gagctcctccgcgatgcacagcacgaagctggcgaggctgctgagtgcgacgcagttgac 109 |||||||||||||| | ||| |||||||| |||||| ||||| |||||||| | || Sbjct: 473 gagctcctccgcgacgtcgagcgcgaagctgacgaggccactgagcacgacgcaggtcac 414 Query: 110 gggcggcacgcc 121 |||||||||||| Sbjct: 413 gggcggcacgcc 402
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 50 gagctcctccgcgatgcacagcacgaagctggcgaggctgctgagtgcgacgcagttgac 109 |||||||||||||| | ||| |||||||| |||||| ||||| |||||||| | || Sbjct: 6216902 gagctcctccgcgacgtcgagcgcgaagctgacgaggccactgagcacgacgcaggtcac 6216843 Query: 110 gggcggcacgcc 121 |||||||||||| Sbjct: 6216842 gggcggcacgcc 6216831
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 50 gagctcctccgcgatgcacagcacgaagctggcgaggctgctgagtgcgacgcagttgac 109 |||||||||||||| | ||| |||||||| |||||| ||||| |||||||| | || Sbjct: 130721 gagctcctccgcgacgtcgagcgcgaagctgacgaggccactgagcacgacgcaggtcac 130662 Query: 110 gggcggcacgcc 121 |||||||||||| Sbjct: 130661 gggcggcacgcc 130650
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 50 gagctcctccgcgatgcacagcacgaagctggcgaggctgctgagtgcgacgcagttgac 109 |||||||||||||| | ||| |||||||| |||||| ||||| |||||||| | || Sbjct: 10978 gagctcctccgcgacgtcgagcgcgaagctgacgaggccactgagcacgacgcaggtcac 10919 Query: 110 gggcggcacgcc 121 |||||||||||| Sbjct: 10918 gggcggcacgcc 10907
>dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence Length = 1808 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 50 gagctcctccgcgatgcacagcacgaagctggcgaggctgctgagtgcgacgcagttgac 109 |||||||||||||| | ||| |||||||| |||||| ||||| |||||||| | || Sbjct: 473 gagctcctccgcgacgtcgagcgcgaagctgacgaggccactgagcacgacgcaggtcac 414 Query: 110 gggcggcacgcc 121 |||||||||||| Sbjct: 413 gggcggcacgcc 402
>gb|AF188026.4| Homo sapiens chromosome 8 clone CTD-2373L20 map 8q24.3, complete sequence Length = 101456 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 tataatggcagagtggagcagg 461 |||||||||||||||||||||| Sbjct: 9707 tataatggcagagtggagcagg 9728
>gb|AC090776.3| Homo sapiens chromosome 8, clone CTD-2373L20, complete sequence Length = 101459 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 440 tataatggcagagtggagcagg 461 |||||||||||||||||||||| Sbjct: 91752 tataatggcagagtggagcagg 91731
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 tataatggcagagtggagcagg 461 |||||||||||||||||||||| Sbjct: 155949 tataatggcagagtggagcagg 155970
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 gactgtgagtgccctatctatc 270 |||||||||||||||||||||| Sbjct: 32921 gactgtgagtgccctatctatc 32942
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 agttcgtttgagacggtagctaatc 330 ||||||||||||| ||||||||||| Sbjct: 1743231 agttcgtttgagaaggtagctaatc 1743255
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 taaactgaaaaatagaagggatatt 569 ||||||||||||||| ||||||||| Sbjct: 620466 taaactgaaaaataggagggatatt 620442
>emb|AL935048.7| Zebrafish DNA sequence from clone CH211-168M7, complete sequence Length = 137662 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 ggcaactaataggcaactaat 480 ||||||||||||||||||||| Sbjct: 120465 ggcaactaataggcaactaat 120485
>emb|BX511189.5| Zebrafish DNA sequence from clone DKEY-28G23 in linkage group 17, complete sequence Length = 223248 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gttgacgagccattagagct 201 |||||||||||||||||||| Sbjct: 46835 gttgacgagccattagagct 46816
>gb|AC188408.3| Pan troglodytes BAC clone CH251-31J10 from chromosome 7, complete sequence Length = 162855 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gctaatccaggcagcaagta 343 |||||||||||||||||||| Sbjct: 78237 gctaatccaggcagcaagta 78256
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 attgctgaagatggaggaggacta 395 ||||||||||| |||||||||||| Sbjct: 7405341 attgctgaagaaggaggaggacta 7405364
>emb|CR381672.10| Zebrafish DNA sequence from clone DKEY-5L8 in linkage group 25, complete sequence Length = 137425 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 ctatctatctacgttgcagcatat 285 |||||||||||| ||||||||||| Sbjct: 89020 ctatctatctacattgcagcatat 88997
>gb|AY692148.1| Lecanicillium psalliotae alkaline serine protease ver112 precursor, gene, complete cds Length = 1640 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggcgtcgcggttgtcgttg 185 |||||||||||||||||||| Sbjct: 1031 cggcgtcgcggttgtcgttg 1012
>gb|AC131801.3| Mus musculus BAC clone RP24-538A12 from chromosome 10, complete sequence Length = 158745 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aagatggcacacggagctcc 56 |||||||||||||||||||| Sbjct: 14472 aagatggcacacggagctcc 14453
>gb|AC123565.6| Homo sapiens 3 BAC RP11-539J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156163 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 agagaatttattttgtgtccttctaaac 549 ||||||| |||||||| ||||||||||| Sbjct: 57755 agagaatatattttgtttccttctaaac 57782
>gb|AC006045.2| Homo sapiens BAC clone RP11-547G15 from 7, complete sequence Length = 193126 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gctaatccaggcagcaagta 343 |||||||||||||||||||| Sbjct: 78736 gctaatccaggcagcaagta 78755
>ref|NM_135270.1| Drosophila melanogaster CG5177-RA (CG5177), mRNA Length = 980 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 attgctgaagatggaggaggacta 395 ||||||||||| |||||||||||| Sbjct: 97 attgctgaagaaggaggaggacta 120
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tagctagagaatttattttg 536 |||||||||||||||||||| Sbjct: 18254630 tagctagagaatttattttg 18254611
>emb|AL445683.11| Human DNA sequence from clone RP11-57K1 on chromosome 9q34.11-34.2, complete sequence Length = 180396 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 agatggaggaggactagatt 399 |||||||||||||||||||| Sbjct: 48287 agatggaggaggactagatt 48268
>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18, complete sequence Length = 215723 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tttaactggatgatcagtta 306 |||||||||||||||||||| Sbjct: 128186 tttaactggatgatcagtta 128167
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gcagacgaagccgacggcgc 28 |||||||||||||||||||| Sbjct: 735872 gcagacgaagccgacggcgc 735891 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gcagacgaagccgacggcgc 28 |||||||||||||||||||| Sbjct: 1842085 gcagacgaagccgacggcgc 1842066
>emb|BX897733.8| Zebrafish DNA sequence from clone CH211-105D4 in linkage group 2, complete sequence Length = 115031 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 taatggcccaatcgtctgtgtattagca 504 ||||||||||||| ||||| |||||||| Sbjct: 17677 taatggcccaatcctctgtttattagca 17650
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 attgctgaagatggaggaggacta 395 ||||||||||| |||||||||||| Sbjct: 153707 attgctgaagaaggaggaggacta 153730
>gb|AC008354.3|AC008354 Drosophila melanogaster, chromosome 2L, region 28A-28A, BAC clone BACR30I17, complete sequence Length = 159350 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 attgctgaagatggaggaggacta 395 ||||||||||| |||||||||||| Sbjct: 16971 attgctgaagaaggaggaggacta 16994
>gb|BT004896.1| Drosophila melanogaster LD18740 full insert cDNA Length = 993 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 attgctgaagatggaggaggacta 395 ||||||||||| |||||||||||| Sbjct: 92 attgctgaagaaggaggaggacta 115
>dbj|BS000107.1| Pan troglodytes chromosome 22 clone:PTB-020H02, map 22, complete sequences Length = 145633 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 atcttagctagagaatttattttg 536 |||||||||||||||||| ||||| Sbjct: 49821 atcttagctagagaattttttttg 49844
>gb|AC010761.10| Homo sapiens chromosome 17, clone RP11-386F9, complete sequence Length = 177773 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gtgcccaagatggcacacgg 50 |||||||||||||||||||| Sbjct: 50972 gtgcccaagatggcacacgg 50953
>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18, complete sequence Length = 213741 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tttaactggatgatcagtta 306 |||||||||||||||||||| Sbjct: 90685 tttaactggatgatcagtta 90666
>emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 in linkage group 17, complete sequence Length = 132502 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gtgtaaaaacaatattgctg 378 |||||||||||||||||||| Sbjct: 48540 gtgtaaaaacaatattgctg 48559
>gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190636 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aagatggcacacggagctcc 56 |||||||||||||||||||| Sbjct: 17181 aagatggcacacggagctcc 17200
>emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11, complete sequence Length = 184142 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gtgtaaaaacaatattgctg 378 |||||||||||||||||||| Sbjct: 75265 gtgtaaaaacaatattgctg 75246
>gb|AC004739.1|AC004739 Homo sapiens PAC clone RP4-531G15 from 7p21, complete sequence Length = 97979 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gctaatccaggcagcaagta 343 |||||||||||||||||||| Sbjct: 29299 gctaatccaggcagcaagta 29318
>gb|AC006288.1|AC006288 Homo sapiens chromosome 9, clone hRPK.295_D_22, complete sequence Length = 220218 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 agatggaggaggactagatt 399 |||||||||||||||||||| Sbjct: 4445 agatggaggaggactagatt 4464
>gb|AY870806.1| Lecanicillium psalliotae strain YMF1.00602 alkaline serine protease gene, complete cds Length = 1368 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cggcgtcgcggttgtcgttg 185 |||||||||||||||||||| Sbjct: 974 cggcgtcgcggttgtcgttg 955
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tagctagagaatttattttg 536 |||||||||||||||||||| Sbjct: 116364 tagctagagaatttattttg 116383
>emb|AL831761.9| Mouse DNA sequence from clone RP23-318H16 on chromosome 4, complete sequence Length = 179556 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gcatcatgtctgtgcaatat 442 |||||||||||||||||||| Sbjct: 142961 gcatcatgtctgtgcaatat 142942 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 98,479,992 Number of extensions: 5924690 Number of successful extensions: 89044 Number of sequences better than 10.0: 40 Number of HSP's gapped: 89044 Number of HSP's successfully gapped: 41 Length of query: 612 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 590 Effective length of database: 18,508,616,841 Effective search space: 10920083936190 Effective search space used: 10920083936190 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)