>Q39189:RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 671
 Score = 35.4 bits (80), Expect = 0.81
 Identities = 30/106 (28%), Positives = 47/106 (44%)
 Frame = +1

Query: 73  VAERRRKEGLPQESRSSSLPNEFKKASSLPVLSRGLHGSASASNLALVTSAIKRLQATEG 252
           V+   ++ G+  E  ++  P+E  ++  +    +      S     L   A K L  T G
Sbjct: 457 VSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFL--EAAKELLETSG 514

Query: 253 LSQEVLDRKARAMERVEFAKNKKQQMLTRRHSSPNFDLHAGEPFLS 390
           LS EVL  KA A +   F + KK+ +LT   +     L AG+P  S
Sbjct: 515 LSAEVLLAKALA-KTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYS 559

>Q9FBM3:EX7L_STRCO Exodeoxyribonuclease 7 large subunit - Streptomyces coelicolor|
          Length = 402

 Score = 33.9 bits (76), Expect = 2.4
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -3

Query: 771 LSQLGLGPELAQTLEDIRKALPLEALISLLRDLPLGTSPSSIGLECRVGSLGDR 610
           +  +G+G EL   LE ++KAL  E L +  R  PL   P  IGL C   S  +R
Sbjct: 105 IKPVGVG-ELLARLEQLKKALAREGLFAAERKQPLPFLPQLIGLVCGRASAAER 157

>Q5BKY9:F133B_HUMAN Protein FAM133B - Homo sapiens (Human)|
          Length = 247

 Score = 32.0 bits (71), Expect = 8.9
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +1

Query: 463 TSSPSMEFTPDSPKLGKRFQRRANSMGLASTLDGIDEMDEESKEALRRRSIS-EGTYAAL 639
           +SS S +   +  K GKR +++ N    +S    + E + +SK++L+++  S +GT    
Sbjct: 114 SSSSSSDSEDEDKKQGKRRKKKKNRSHKSSE-SSMSETESDSKDSLKKKKKSKDGT--EK 170

Query: 640 KANGAGAGPKRKVSEETDKGLKRKSLS 720
           + +  G   KRK+  E DK L  +SLS
Sbjct: 171 EKDIKGLSKKRKMYSE-DKPLSSESLS 196


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 261,806,362
Number of extensions: 5137594
Number of successful extensions: 17024
Number of sequences better than 10.0: 3
Number of HSP's gapped: 17012
Number of HSP's successfully gapped: 3
Length of query: 612
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 493
Effective length of database: 68,045,334
Effective search space: 33546349662
Effective search space used: 33546349662
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)