ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf77e15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9FK81:Y5258_ARATH Uncharacterized protein At5g22580 - Arabidops... 101 3e-21
2Q9LUV2:POP3_ARATH Putative Pop3 protein - Arabidopsis thaliana (... 74 5e-13
3Q45539:CSBB_BACSU Putative glycosyltransferase csbB - Bacillus s... 32 2.3

>Q9FK81:Y5258_ARATH Uncharacterized protein At5g22580 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 111
 Score =  101 bits (251), Expect = 3e-21
 Identities = 47/99 (47%), Positives = 65/99 (65%)
 Frame = +1

Query: 88  FKHLCLVRFKEGVVVDDIIQQLTKLAAELDTVKFFGWGKDVLNQETLTQGFTHVFSMSFA 267
           FKHL +V+FKE   VD+I++ L  L +++DTVK F WG+D  + + L QGFTH FSM+F 
Sbjct: 6   FKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFE 65

Query: 268 SAEDLAACMGHEKHSAFAATFMAVLDKVVVLDFPFVVAK 384
           + +   A   H  H  F+A F AV+DK+V+LDFP    K
Sbjct: 66  NKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104



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>Q9LUV2:POP3_ARATH Putative Pop3 protein - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 109

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +1

Query: 91  KHLCLVRFKEGVV---VDDIIQQLTKLAAELDTVKFFGWGKDVLNQETLTQGFTHVFSMS 261
           KH+ L  FK+GV    ++++I+    L   ++ +K F WGKDV + E L QG+TH+F  +
Sbjct: 9   KHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGYTHIFEST 67

Query: 262 FASAEDLAACMGHEKHSAFAATFMAVLDKVVVLDF 366
           F S E +A  + H  H  FA  F+  LDKV+V+D+
Sbjct: 68  FESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDY 102



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>Q45539:CSBB_BACSU Putative glycosyltransferase csbB - Bacillus subtilis|
          Length = 329

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 130 VDDIIQQLTKLAAELDTVKFFGWGKDVLNQETLTQGFTHV 249
           VDD +QQ+  LAA    VK+  + ++   +  +  GF HV
Sbjct: 47  VDDTLQQIKDLAATCSRVKYISFSRNFGKEAAILAGFEHV 86


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 101,544,017
Number of extensions: 1978396
Number of successful extensions: 4664
Number of sequences better than 10.0: 3
Number of HSP's gapped: 4662
Number of HSP's successfully gapped: 3
Length of query: 233
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 123
Effective length of database: 70,513,989
Effective search space: 8673220647
Effective search space used: 8673220647
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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