ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71i03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein Length = 2077 Score = 387 bits (195), Expect = e-104 Identities = 318/359 (88%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||||||||||||| ||||||||||| ||||| | ||||||||||||| |||| ||| Sbjct: 82 gtcgtcgccaacaccgagggtgatgccctgtacagcctgcgtcagagcttgaaagatgct 141 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 142 aacaatgtcttgcagagttgggatcccactcttgttaatccatgtacatggttccatgtt 201 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || |||||||| || |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 202 acgtgtaacaacgataacagtgttatcagagttgaccttggaaatgcacaattatctggc 261 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 || |||||| | |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 262 gttctagtgccacaacttggccagctgaaaaatctccaatatttggagctttacagcaac 321 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 ||||||||||| ||||||| |||||||||| ||||| |||| |||||||||||||||| Sbjct: 322 aacataagtgggacaataccccctgaactggggaacctgactaacctggtcagtttggat 381 Query: 546 ctgtatctgaacaagttcactggagtcattcctgacagcctggggaatcttttgaagct 604 |||||| ||||||| ||| |||| || |||||||||||||||||||| ||||||| Sbjct: 382 ctgtatatgaacaacttctctggcaatatccctgacagcctggggaatctagtgaagct 440
>emb|AJ400870.1|ZMA400870 Zea mays partial mRNA for somatic embryogenesis receptor-like kinase 3, (serk3 gene) Length = 1622 Score = 323 bits (163), Expect = 6e-85 Identities = 310/359 (86%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||||||||||||| ||||| |||||||| || | |||||| |||||| ||| |||| Sbjct: 4 gtcgtcgccaacaccgagggcgatgctctatacagcctgcggcagagcttgatagatacg 63 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| ||||||||||||||| ||||||||||||| || |||||||||||||| ||| Sbjct: 64 aacaatgtcttgcagagttgggattccactcttgttaatccatgtacatggtttcacgtt 123 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || ||||||| || |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 124 acgtgtaacagcgataacagtgttatcagagttgaccttggaaatgcacaattatctggc 183 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 || |||||| | || ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 184 gtcctagtgccacagcttggtcagctgaaaaatctccaatatttggagctttacagcaac 243 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 || |||||||| ||||||| |||||||||| ||||| |||| ||| |||||||||||| Sbjct: 244 aaaataagtggggcaataccccctgaactggggaacctgactaaccttgtcagtttggat 303 Query: 546 ctgtatctgaacaagttcactggagtcattcctgacagcctggggaatcttttgaagct 604 |||||| || |||| ||| |||| || ||||||||||| |||||||| |||||||| Sbjct: 304 ctgtatatggacaacttctctggcaatatccctgacagcctagggaatctattgaagct 362
>gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full insert mRNA sequence Length = 2298 Score = 244 bits (123), Expect = 4e-61 Identities = 273/323 (84%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||| ||| ||||| ||||||||||||||||| | |||||||| ||||| || ||| Sbjct: 212 gtcgccgctaacacagagggtgatgctctgtacagtctgcgtcaaagccttaaagatgct 271 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| ||||| || || |||||||| |||||| Sbjct: 272 aacaatgtgctgcagagttgggatcccactctggttaatccgtgcacatggttccatgtt 331 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || ||||||| ||||||||||||||| |||||||| |||||||| |||||| | || ||| Sbjct: 332 acttgtaacactgacaacagtgtaatcagagttgatcttggaaacgcacaactgtcaggt 391 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 | | | |||||||||||||| ||| |||||||||| |||||||||||||| || |||||| Sbjct: 392 gcattggtgtcccaacttggacagttgaaaaatctacaatatttggagctgtacagcaac 451 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 || ||||| || |||||||| ||||| || ||| | || | |||||||||||||||| Sbjct: 452 aatataagcgggacaatacctttggaactcgggaacttgacaaacctggtcagtttggat 511 Query: 546 ctgtatctgaacaagttcactgg 568 ||||| |||||||| |||||||| Sbjct: 512 ctgtacctgaacaaattcactgg 534
>ref|NM_001059510.1| Oryza sativa (japonica cultivar-group) Os04g0457800 (Os04g0457800) mRNA, complete cds Length = 2296 Score = 228 bits (115), Expect = 3e-56 Identities = 271/323 (83%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||| ||||||||||||||||||||| || |||| ||||| || || ||||| ||| Sbjct: 287 gtcggcgccaacacggagggtgatgccctatatagtctgcgccaaagtctgaaagatgct 346 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 347 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 406 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || |||||| ||||||||| || || |||||||| ||||||||||||||| | || ||| Sbjct: 407 acttgtaaccctgacaacagcgtgatcagagttgatcttggaaatgcacaactgtcaggt 466 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 | | | || |||| ||||||||| |||||||||| |||||| |||||||||| |||||| Sbjct: 467 gcattggttccccagcttgggcagttgaaaaatctgcaatatctggagctttacagcaac 526 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 ||||||||||| |||||||| ||||||||| ||| |||||| | |||||||||||||| Sbjct: 527 aacataagtgggacaatacctaatgaactgggaaacttaactaacttggtcagtttggat 586 Query: 546 ctgtatctgaacaagttcactgg 568 || || |||||||| |||||||| Sbjct: 587 ctttacctgaacaacttcactgg 609
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein kinase 1 mRNA, complete cds Length = 2380 Score = 228 bits (115), Expect = 3e-56 Identities = 271/323 (83%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||| ||||||||||||||||||||| || |||| ||||| || || ||||| ||| Sbjct: 205 gtcggcgccaacacggagggtgatgccctatatagtctgcgccaaagtctgaaagatgct 264 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 265 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 324 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || |||||| ||||||||| || || |||||||| ||||||||||||||| | || ||| Sbjct: 325 acttgtaaccctgacaacagcgtgatcagagttgatcttggaaatgcacaactgtcaggt 384 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 | | | || |||| ||||||||| |||||||||| |||||| |||||||||| |||||| Sbjct: 385 gcattggttccccagcttgggcagttgaaaaatctgcaatatctggagctttacagcaac 444 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 ||||||||||| |||||||| ||||||||| ||| |||||| | |||||||||||||| Sbjct: 445 aacataagtgggacaatacctaatgaactgggaaacttaactaacttggtcagtttggat 504 Query: 546 ctgtatctgaacaagttcactgg 568 || || |||||||| |||||||| Sbjct: 505 ctttacctgaacaacttcactgg 527
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full insert sequence Length = 2296 Score = 228 bits (115), Expect = 3e-56 Identities = 271/323 (83%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||| ||||||||||||||||||||| || |||| ||||| || || ||||| ||| Sbjct: 287 gtcggcgccaacacggagggtgatgccctatatagtctgcgccaaagtctgaaagatgct 346 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 347 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 406 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || |||||| ||||||||| || || |||||||| ||||||||||||||| | || ||| Sbjct: 407 acttgtaaccctgacaacagcgtgatcagagttgatcttggaaatgcacaactgtcaggt 466 Query: 426 gtactagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaac 485 | | | || |||| ||||||||| |||||||||| |||||| |||||||||| |||||| Sbjct: 467 gcattggttccccagcttgggcagttgaaaaatctgcaatatctggagctttacagcaac 526 Query: 486 aacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggat 545 ||||||||||| |||||||| ||||||||| ||| |||||| | |||||||||||||| Sbjct: 527 aacataagtgggacaatacctaatgaactgggaaacttaactaacttggtcagtttggat 586 Query: 546 ctgtatctgaacaagttcactgg 568 || || |||||||| |||||||| Sbjct: 587 ctttacctgaacaacttcactgg 609
>gb|AY110115.1| Zea mays CL444_1 mRNA sequence Length = 2474 Score = 228 bits (115), Expect = 3e-56 Identities = 184/207 (88%) Strand = Plus / Plus Query: 246 gtcgtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagc 305 |||||||||||||| ||||||||||| ||||| | ||||||||||||| |||| ||| Sbjct: 310 gtcgtcgccaacaccgagggtgatgccctgtacagcctgcgtcagagcttgaaagatgct 369 Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 370 aacaatgtcttgcagagttgggatcccactcttgttaatccatgtacatggttccatgtt 429 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 || |||||||| || |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 430 acgtgtaacaacgataacagtgttatcagagttgaccttggaaatgcacaattatctggc 489 Query: 426 gtactagtgtcccaacttgggcagctg 452 || |||||| | |||||||| |||||| Sbjct: 490 gttctagtgccacaacttggccagctg 516 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 576 cctgacagcctggggaatcttttgaagct 604 |||||||||||||||||||| ||||||| Sbjct: 640 cctgacagcctggggaatctagtgaagct 668
>emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein Length = 2068 Score = 226 bits (114), Expect = 1e-55 Identities = 279/334 (83%) Strand = Plus / Plus Query: 249 gtcgccaacacggagggtgatgctctgtataacctgcgtcagagcctgaaggatagcaac 308 |||||||||||||||||||||||||| || | ||| || || |||||||| |||| |||| Sbjct: 79 gtcgccaacacggagggtgatgctctatacagcctacgacaaagcctgaaagataacaac 138 Query: 309 aatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgttaca 368 || || |||||||||||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 139 aacgtgctgcagagttgggatccaactctggttaatccatgtacatggttccatgttact 198 Query: 369 tgtaacaatgacaacagtgtaattagagttgaccttggaaatgcacaattatctggtgta 428 |||||| ||| |||||||| || ||| |||| ||||||||||||||| |||| ||| | Sbjct: 199 tgtaaccctgataacagtgtcatcagacttgatcttggaaatgcacaactatcaggtcca 258 Query: 429 ctagtgtcccaacttgggcagctgaaaaatctccaatatttggagctttatagcaacaac 488 | ||| | || |||||||| |||||||| | |||||| |||| ||||| || |||||| Sbjct: 259 ttggtgccacagcttgggcaattgaaaaatatgcaatatctggaactttacagtaacaac 318 Query: 489 ataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtttggatctg 548 |||||||| |||||||| |||||||||| ||| | |||| ||||||||||||||| ||| Sbjct: 319 ataagtgggccaataccacctgaactggggaacttgactaacctggtcagtttggacctg 378 Query: 549 tatctgaacaagttcactggagtcattcctgaca 582 || || ||||| |||||||| | |||||||||| Sbjct: 379 tacctcaacaacttcactggcggtattcctgaca 412
>emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11 Length = 5484 Score = 131 bits (66), Expect = 4e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 264 ggtgatgctctgtataacctgcgtcagagcctgaaggatagcaacaatgtattgcagagt 323 |||||||| ||||| | ||||||||||||| |||| ||| |||||||| ||||||||| Sbjct: 1052 ggtgatgccctgtacagcctgcgtcagagcttgaaagatgctaacaatgtcttgcagagt 1111 Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgacaac 383 |||||||||||||||||||| || ||||||||||| |||||||| |||||||| || ||| Sbjct: 1112 tgggatcccactcttgttaatccatgtacatggttccatgttacgtgtaacaacgataac 1171 Query: 384 agtgtaattagagt 397 ||||| || ||||| Sbjct: 1172 agtgttatcagagt 1185 Score = 131 bits (66), Expect = 4e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 470 ggagctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactag 529 ||||||||| ||||||||||||||||| ||||||| |||||||||| ||||| |||| Sbjct: 2165 ggagctttacagcaacaacataagtgggacaataccccctgaactggggaacctgactaa 2224 Query: 530 cctggtcagtttggatctgtatctgaacaagttcactggagtcattcctgacagcctggg 589 |||||||||||||||||||||| ||||||| ||| |||| || |||||||||||||| Sbjct: 2225 cctggtcagtttggatctgtatatgaacaacttctctggcaatatccctgacagcctggg 2284 Query: 590 gaatcttttgaagcttagattcctgtaaga 619 |||||| ||||||| | ||||||||||| Sbjct: 2285 gaatctagtgaagctgcgtttcctgtaaga 2314 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 398 tgaccttggaaatgcacaattatctggtgtactagtgtcccaacttgggcagctgaaaaa 457 ||||||||||||||||||||||||||| || |||||| | |||||||| ||||||||||| Sbjct: 1274 tgaccttggaaatgcacaattatctggcgttctagtgccacaacttggccagctgaaaaa 1333 Query: 458 tctccaatatttg 470 ||||||||||||| Sbjct: 1334 tctccaatatttg 1346
>gb|AY570507.1| Theobroma cacao somatic embryogenesis receptor-like kinase (SERK) mRNA, partial cds Length = 1402 Score = 119 bits (60), Expect = 2e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||| || ||||| ||||| || ||||||||||||||| Sbjct: 139 aacaatgtcctgcagagttgggatcctacccttgtcaacccctgcacatggtttcatgtt 198 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgca 413 |||||||||||||| || ||||| ||||||||||| ||||| |||||| Sbjct: 199 acatgtaacaatgataatagtgtcattagagttgatcttggcaatgca 246 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 468 ttggagctttatagcaacaacataagtgg 496 ||||| |||||||| |||||||||||||| Sbjct: 301 ttggaactttatagtaacaacataagtgg 329
>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete cds Length = 1890 Score = 107 bits (54), Expect = 6e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 316 tgcagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaaca 375 ||||||| |||||||| ||||| || || || || |||||||| |||||||| ||||| | Sbjct: 146 tgcagagctgggatccgactctggtcaatccatgcacatggttccatgttacttgtaata 205 Query: 376 atgacaacagtgtaattagagttgaccttggaaatgcacaattatctggt 425 ||||||| ||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 206 atgacaatagtgtcattagagttgatcttggaaatgcacagttatctggt 255
>emb|CR855164.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence Length = 111824 Score = 101 bits (51), Expect = 4e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 470 ggagctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactag 529 ||||||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||| Sbjct: 91446 ggagctttacagcaacaacataagtgggacaatacctaatgaactgggaaacttaactaa 91387 Query: 530 cctggtcagtttggatctgtatctgaacaagttcactgg 568 | |||||||||||||||| || |||||||| |||||||| Sbjct: 91386 cttggtcagtttggatctttacctgaacaacttcactgg 91348 Score = 63.9 bits (32), Expect = 9e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 91912 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 91853 Query: 366 acatgtaacaatgacaacag 385 || |||||| ||||||||| Sbjct: 91852 acttgtaaccctgacaacag 91833 Score = 44.1 bits (22), Expect = 0.79 Identities = 55/66 (83%) Strand = Plus / Minus Query: 402 cttggaaatgcacaattatctggtgtactagtgtcccaacttgggcagctgaaaaatctc 461 ||||||||||||||| | || |||| | | || |||| ||||||||| |||||||||| Sbjct: 91724 cttggaaatgcacaactgtcaggtgcattggttccccagcttgggcagttgaaaaatctg 91665 Query: 462 caatat 467 |||||| Sbjct: 91664 caatat 91659
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 101 bits (51), Expect = 4e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 470 ggagctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactag 529 ||||||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||| Sbjct: 22845121 ggagctttacagcaacaacataagtgggacaatacctaatgaactgggaaacttaactaa 22845062 Query: 530 cctggtcagtttggatctgtatctgaacaagttcactgg 568 | |||||||||||||||| || |||||||| |||||||| Sbjct: 22845061 cttggtcagtttggatctttacctgaacaacttcactgg 22845023 Score = 63.9 bits (32), Expect = 9e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 22845587 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 22845528 Query: 366 acatgtaacaatgacaacag 385 || |||||| ||||||||| Sbjct: 22845527 acttgtaaccctgacaacag 22845508 Score = 44.1 bits (22), Expect = 0.79 Identities = 55/66 (83%) Strand = Plus / Minus Query: 402 cttggaaatgcacaattatctggtgtactagtgtcccaacttgggcagctgaaaaatctc 461 ||||||||||||||| | || |||| | | || |||| ||||||||| |||||||||| Sbjct: 22845399 cttggaaatgcacaactgtcaggtgcattggttccccagcttgggcagttgaaaaatctg 22845340 Query: 462 caatat 467 |||||| Sbjct: 22845339 caatat 22845334
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 101 bits (51), Expect = 4e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 470 ggagctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactag 529 ||||||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||| Sbjct: 53896 ggagctttacagcaacaacataagtgggacaatacctaatgaactgggaaacttaactaa 53837 Query: 530 cctggtcagtttggatctgtatctgaacaagttcactgg 568 | |||||||||||||||| || |||||||| |||||||| Sbjct: 53836 cttggtcagtttggatctttacctgaacaacttcactgg 53798 Score = 63.9 bits (32), Expect = 9e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| |||||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 54362 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgta 54303 Query: 366 acatgtaacaatgacaacag 385 || |||||| ||||||||| Sbjct: 54302 acttgtaaccctgacaacag 54283 Score = 44.1 bits (22), Expect = 0.79 Identities = 55/66 (83%) Strand = Plus / Minus Query: 402 cttggaaatgcacaattatctggtgtactagtgtcccaacttgggcagctgaaaaatctc 461 ||||||||||||||| | || |||| | | || |||| ||||||||| |||||||||| Sbjct: 54174 cttggaaatgcacaactgtcaggtgcattggttccccagcttgggcagttgaaaaatctg 54115 Query: 462 caatat 467 |||||| Sbjct: 54114 caatat 54109
>gb|DQ118081.1| Nicotiana tabacum leucine rich repeat protein 1 mRNA, complete cds Length = 1004 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 |||||||| || |||||||||||||| || ||||| || |||||||| ||||||||||| Sbjct: 160 aacaatgttttacagagttgggatccaacccttgtcaatccttgtacttggtttcatgtg 219 Query: 366 acatgtaacaatgacaacagtgtaattagagttgaccttggaaatgca 413 || || |||| ||| || ||||||| ||||||||| |||||||||||| Sbjct: 220 acctgcaacagtgagaatagtgtaactagagttgatcttggaaatgca 267
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) mRNA, complete cds Length = 2392 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 309 aatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgttaca 368 ||||| ||||| ||||||||||| || |||||||| |||||||||||||||||||| || Sbjct: 369 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttcatgtaacc 428 Query: 369 tgtaacaatgacaacagtgtaattagagttgaccttggaaatgc 412 || |||||||| || ||||| || |||||||| || |||||||| Sbjct: 429 tgcaacaatgataatagtgtcataagagttgatctgggaaatgc 472
>emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryogenesis receptor-like kinase 1, exons 1-11 Length = 5715 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Plus Query: 264 ggtgatgctctgtataacctgcgtcagagcctgaaggatagcaacaatgtattgcagagt 323 ||||||||||| || | ||| || || |||||||| |||| |||||| || |||||||| Sbjct: 1700 ggtgatgctctatacagcctacgacaaagcctgaaagataacaacaacgtgctgcagagt 1759 Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgacaac 383 |||||||| ||||| ||||| || ||||||||||| |||||||| |||||| ||| ||| Sbjct: 1760 tgggatccaactctggttaatccatgtacatggttccatgttacttgtaaccctgataac 1819 Query: 384 agtgt 388 ||||| Sbjct: 1820 agtgt 1824 Score = 89.7 bits (45), Expect = 1e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 474 ctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactagcctg 533 ||||| || |||||||||||||| |||||||| |||||||||| ||| | |||| |||| Sbjct: 2288 ctttacagtaacaacataagtgggccaataccacctgaactggggaacttgactaacctg 2347 Query: 534 gtcagtttggatctgtatctgaacaagttcactggagtcattcctgaca 582 ||||||||||| ||||| || ||||| |||||||| | |||||||||| Sbjct: 2348 gtcagtttggacctgtacctcaacaacttcactggcggtattcctgaca 2396
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) gene, complete cds Length = 4206 Score = 81.8 bits (41), Expect = 4e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 309 aatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgttaca 368 ||||| ||||| ||||||||||| || |||||||| |||||||||||||||||||| || Sbjct: 892 aatgttttgcaaagttgggatcctacacttgttaatccttgtacatggtttcatgtaacc 951 Query: 369 tgtaacaatgacaacagtgtaattagagt 397 || |||||||| || ||||| || ||||| Sbjct: 952 tgcaacaatgataatagtgtcataagagt 980
>ref|NM_202652.1| Arabidopsis thaliana protein binding (AT3G43740) mRNA, complete cds Length = 747 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 145 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 200
>ref|NM_114242.2| Arabidopsis thaliana protein binding (AT3G43740) mRNA, complete cds Length = 844 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 155 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 210
>gb|BT010407.1| Arabidopsis thaliana At3g43740 mRNA, complete cds Length = 657 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 145 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 200
>emb|AL162691.1|ATT28A8 Arabidopsis thaliana DNA chromosome 3, BAC clone T28A8 Length = 97371 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 30661 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 30716
>dbj|AK176756.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-29-M07 Length = 866 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 169 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 224
>dbj|AK176628.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-16-M13 Length = 933 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 195 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 250
>dbj|AK175524.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-94-I24 Length = 916 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 213 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 268
>dbj|AK175133.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-55-C11 Length = 933 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 195 cagagttgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 250
>gb|AC189637.1| Brassica rapa subsp. pekinensis clone KBrS004O21, complete sequence Length = 113108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 |||||||||||| | |||||||||| ||||||||| |||||||||||||| || || | | Sbjct: 43516 cagagttgggatgctactcttgttaccccttgtacttggtttcatgttacttgcaatagt 43457 Query: 378 gacaacagtgt 388 || |||||||| Sbjct: 43456 gagaacagtgt 43446
>dbj|AK176791.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-33-L05 Length = 905 Score = 63.9 bits (32), Expect = 9e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||| ||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 219 cagagtcgggatccaactcttgttaatccttgtacttggtttcatgtcacttgtaa 274
>gb|BT013118.1| Lycopersicon esculentum clone 114408F, mRNA sequence Length = 1128 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgt 364 ||||| |||||||| | |||||||||||||||||| ||||||||||| Sbjct: 384 cagagctgggatccaaatcttgttaacccttgtacctggtttcatgt 430
>gb|DQ002406.1| Zea mays copia retrotransposon ji and helitron Mo17_14577, complete sequence Length = 92777 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 482 caacaacataagtggcccaatacctgctgaactgggcaacctaactagcctggtcagtt 540 ||||||||||||||| |||||||| ||||||||| ||||| |||| ||||||||||| Sbjct: 60095 caacaacataagtgggacaatacctcctgaactggagaacctgactaacctggtcagtt 60037
>emb|BX825257.1|CNS0A54E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 845 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgt 364 |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 156 cagagttgggatccaactcttgtaaatccttgtacttggtttcatgt 202
>emb|BX830363.1|CNS0A026 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaac 374 |||||||| ||||||||||| |||||||| ||||| |||||||| |||||| Sbjct: 250 tgggatccaactcttgttaatccttgtacctggttccatgttacctgtaac 300
>emb|X88779.1|ZMGLOSSY Z.mays Glossy2 locus DNA Length = 6343 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 470 ggagctttatagcaacaacataagtggcccaatacctgctgaactgggcaacctaactag 529 ||||||||| | ||||||||||||||| |||||||| || |||| || ||||| |||| Sbjct: 149 ggagctttacaacaacaacataagtgggacaatacctcctaaactagggaacctgactaa 208 Query: 530 cctggtcagtt 540 ||||||||||| Sbjct: 209 cctggtcagtt 219
>emb|X95269.1|LELRPGENE L.esculentum LRP gene Length = 4604 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgt 364 ||||| |||||||| | |||||||||||||||||| ||||||||||| Sbjct: 266 cagagctgggatccaaatcttgttaacccttgtacctggtttcatgt 312
>emb|AM231407.1| Solanum tuberosum partial mRNA for putative somatic embryogenesis receptor kinase leucine-rich repeat protein 2 (lrr2 gene) Length = 237 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgt 364 ||||| |||||||| | |||||||||||||||||| ||||||||||| Sbjct: 184 cagagctgggatccgaatcttgttaacccttgtacctggtttcatgt 230
>ref|NM_122117.2| Arabidopsis thaliana protein binding (AT5G21090) mRNA, complete cds Length = 1154 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 291 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 350 Query: 378 gacaac 383 |||||| Sbjct: 351 gacaac 356
>gb|AY496135.1| Capsicum annuum induced stolon tip protein LRP mRNA, complete cds Length = 735 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaa 373 |||||||| | |||||||||||| ||||| |||||||||||||| ||||| Sbjct: 323 tgggatccgaatcttgttaacccgtgtacttggtttcatgttacttgtaa 372
>gb|AY081542.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 945 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 145 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 204 Query: 378 gacaac 383 |||||| Sbjct: 205 gacaac 210
>gb|BT006268.1| Arabidopsis thaliana At5g21090 mRNA, complete cds Length = 657 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 145 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 204 Query: 378 gacaac 383 |||||| Sbjct: 205 gacaac 210
>gb|AF324989.2|AF324989 Arabidopsis thaliana AT5g21090 (AT5g21090/T10F18_120) mRNA, complete cds Length = 1053 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 281 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 340 Query: 378 gacaac 383 |||||| Sbjct: 341 gacaac 346
>gb|AF370543.1|AF370543 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1141 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 291 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 350 Query: 378 gacaac 383 |||||| Sbjct: 351 gacaac 356
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete sequence Length = 112600 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 110034 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 109975 Query: 378 gacaac 383 |||||| Sbjct: 109974 gacaac 109969
>dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesis receptor kinase 1, complete cds Length = 1866 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatccc-actcttgttaacccttgtacatggtttcatgt 364 ||||||||| |||| |||||||||||| || ||||| || || || |||||||||||||| Sbjct: 118 aacaatgtactgcacagttgggatccctacccttgtcaatccctgcacatggtttcatgt 177 Query: 365 tacatg 370 |||||| Sbjct: 178 tacatg 183
>gb|BT002517.1| Arabidopsis thaliana Unknown protein (At5g21090) mRNA, complete cds Length = 1144 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 296 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 355 Query: 378 gacaac 383 |||||| Sbjct: 356 gacaac 361
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome V, complete sequence Length = 84413 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 45120 cagagctgggatccaactcttgttaatccttgtacctggttccatgtcacctgtaaccaa 45061 Query: 378 gacaac 383 |||||| Sbjct: 45060 gacaac 45055
>emb|BX831303.1|CNS09ZCR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1188 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 318 cagagttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaat 377 ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || |||||| | Sbjct: 269 cagagctgggatccaactcttgttaatccttgtacctggttccatgtgacctgtaaccaa 328 Query: 378 gacaac 383 |||||| Sbjct: 329 gacaac 334
>ref|NM_001067643.1| Oryza sativa (japonica cultivar-group) Os08g0174700 (Os08g0174700) mRNA, complete cds Length = 2673 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgac 380 |||||||| || ||||| || || || || || |||||||||||||| || || || ||| Sbjct: 426 agttgggacccaactctggtcaatccgtgcacttggtttcatgttacttgcaataacgac 485 Query: 381 aacagtgtaattagagttgaccttggaaatgc 412 |||||||| || |||||||| ||||| ||||| Sbjct: 486 aacagtgttatcagagttgatcttgggaatgc 517 Score = 46.1 bits (23), Expect = 0.20 Identities = 104/131 (79%) Strand = Plus / Plus Query: 438 caacttgggcagctgaaaaatctccaatatttggagctttatagcaacaacataagtggc 497 ||||||||||| || ||||| | ||||| ||||||| || || || |||||||| || Sbjct: 543 caacttgggcaactaaaaaacttgcaatacctggagctctacagtaataacataagcgga 602 Query: 498 ccaatacctgctgaactgggcaacctaactagcctggtcagtttggatctgtatctgaac 557 | |||||| |||||| || ||||| || | | |||||||||||||| |||| ||||| Sbjct: 603 acgatacctagtgaacttggaaacctcacaaacttggtcagtttggatttgtacttgaac 662 Query: 558 aagttcactgg 568 || |||||||| Sbjct: 663 aacttcactgg 673
>gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced somatic embryogenesis receptor kinase 1 (BISERK1) mRNA, complete cds Length = 2351 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgac 380 |||||||| || ||||| || || || || || |||||||||||||| || || || ||| Sbjct: 245 agttgggacccaactctggtcaatccgtgcacttggtttcatgttacttgcaataacgac 304 Query: 381 aacagtgtaattagagttgaccttggaaatgc 412 |||||||| || |||||||| ||||| ||||| Sbjct: 305 aacagtgttatcagagttgatcttgggaatgc 336 Score = 46.1 bits (23), Expect = 0.20 Identities = 104/131 (79%) Strand = Plus / Plus Query: 438 caacttgggcagctgaaaaatctccaatatttggagctttatagcaacaacataagtggc 497 ||||||||||| || ||||| | ||||| ||||||| || || || |||||||| || Sbjct: 362 caacttgggcaactaaaaaacttgcaatacctggagctctacagtaataacataagcgga 421 Query: 498 ccaatacctgctgaactgggcaacctaactagcctggtcagtttggatctgtatctgaac 557 | |||||| |||||| || ||||| || | | |||||||||||||| |||| ||||| Sbjct: 422 acgatacctagtgaacttggaaacctcacaaacttggtcagtttggatttgtacttgaac 481 Query: 558 aagttcactgg 568 || |||||||| Sbjct: 482 aacttcactgg 492
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family receptor-like protein kinase, complete cds Length = 2674 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgac 380 |||||||| || ||||| || || || || || |||||||||||||| || || || ||| Sbjct: 372 agttgggacccaactctggtcaatccgtgcacttggtttcatgttacttgcaataacgac 431 Query: 381 aacagtgtaattagagttgaccttggaaatgc 412 |||||||| || |||||||| ||||| ||||| Sbjct: 432 aacagtgttatcagagttgatcttgggaatgc 463 Score = 46.1 bits (23), Expect = 0.20 Identities = 104/131 (79%) Strand = Plus / Plus Query: 438 caacttgggcagctgaaaaatctccaatatttggagctttatagcaacaacataagtggc 497 ||||||||||| || ||||| | ||||| ||||||| || || || |||||||| || Sbjct: 489 caacttgggcaactaaaaaacttgcaatacctggagctctacagtaataacataagcgga 548 Query: 498 ccaatacctgctgaactgggcaacctaactagcctggtcagtttggatctgtatctgaac 557 | |||||| |||||| || ||||| || | | |||||||||||||| |||| ||||| Sbjct: 549 acgatacctagtgaacttggaaacctcacaaacttggtcagtttggatttgtacttgaac 608 Query: 558 aagttcactgg 568 || |||||||| Sbjct: 609 aacttcactgg 619
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full insert sequence Length = 2674 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaacaatgac 380 |||||||| || ||||| || || || || || |||||||||||||| || || || ||| Sbjct: 427 agttgggacccaactctggtcaatccgtgcacttggtttcatgttacttgcaataacgac 486 Query: 381 aacagtgtaattagagttgaccttggaaatgc 412 |||||||| || |||||||| ||||| ||||| Sbjct: 487 aacagtgttatcagagttgatcttgggaatgc 518 Score = 46.1 bits (23), Expect = 0.20 Identities = 104/131 (79%) Strand = Plus / Plus Query: 438 caacttgggcagctgaaaaatctccaatatttggagctttatagcaacaacataagtggc 497 ||||||||||| || ||||| | ||||| ||||||| || || || |||||||| || Sbjct: 544 caacttgggcaactaaaaaacttgcaatacctggagctctacagtaataacataagcgga 603 Query: 498 ccaatacctgctgaactgggcaacctaactagcctggtcagtttggatctgtatctgaac 557 | |||||| |||||| || ||||| || | | |||||||||||||| |||| ||||| Sbjct: 604 acgatacctagtgaacttggaaacctcacaaacttggtcagtttggatttgtacttgaac 663 Query: 558 aagttcactgg 568 || |||||||| Sbjct: 664 aacttcactgg 674
>ref|NM_119497.3| Arabidopsis thaliana BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase (BAK1) mRNA, complete cds Length = 2579 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttac 367 ||||||||| | |||||||||| || |||||||||||||||||||| Sbjct: 625 agttgggatgctactcttgttactccatgtacatggtttcatgttac 671
>gb|AF384970.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 3 (SERK3) mRNA, complete cds Length = 2507 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttac 367 ||||||||| | |||||||||| || |||||||||||||||||||| Sbjct: 624 agttgggatgctactcttgttactccatgtacatggtttcatgttac 670
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttac 367 ||||||||| | |||||||||| || |||||||||||||||||||| Sbjct: 117967 agttgggatgctactcttgttactccatgtacatggtttcatgttac 117921
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 54.0 bits (27), Expect = 8e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttac 367 ||||||||| | |||||||||| || |||||||||||||||||||| Sbjct: 53188 agttgggatgctactcttgttactccatgtacatggtttcatgttac 53142
>gb|AC114552.16| Mus musculus chromosome 12, clone RP23-349L22, complete sequence Length = 197585 Score = 54.0 bits (27), Expect = 8e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||||||||||||||||||||||||| Sbjct: 13511 ggaagagagggagggaggaagaaagaa 13537
>gb|AC134902.7| Mus musculus BAC clone RP23-309A11 from 12, complete sequence Length = 228741 Score = 54.0 bits (27), Expect = 8e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||||||||||||||||||||||||| Sbjct: 6588 ggaagagagggagggaggaagaaagaa 6614
>gb|AY500132.1| Sus scrofa testis-specific phosphoglycerate kinase (PGK2) gene, complete cds Length = 3955 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaagaag 34 |||||||||||||||||||||||||| Sbjct: 328 aagagagggagggaggaagaaagaag 353
>gb|AC187497.2| Rhesus macaque BAC clone CH250-65H12 from chromosome unknown, complete sequence Length = 227787 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 95161 ggaagagagggagggaggaagaaag 95185
>gb|AC004752.1| Homo sapiens chromosome 5, BAC clone 8e5 (LBNL H167), complete sequence Length = 83549 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 39863 ggaagagagggagggaggaagaaag 39887
>gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, complete sequence Length = 168654 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 97204 ggaagagagggagggaggaagaaag 97180
>gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, complete sequence Length = 198604 Score = 50.1 bits (25), Expect = 0.013 Identities = 28/29 (96%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaagaaagaag 34 ||||||||||||||||||| ||||||||| Sbjct: 47716 gggaagagagggagggagggagaaagaag 47744
>gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, complete sequence Length = 191207 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 147378 ggaagagagggagggaggaagaaag 147402
>gb|AC011401.9| Homo sapiens chromosome 5 clone CTB-35K5, complete sequence Length = 199275 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 23755 ggaagagagggagggaggaagaaag 23779
>emb|CR376783.22| Zebrafish DNA sequence from clone DKEY-41N20 in linkage group 13, complete sequence Length = 205064 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaagaa 33 ||||||||||||||||||||||||| Sbjct: 14848 aagagagggagggaggaagaaagaa 14872
>dbj|AB040765.2| Mus musculus Polk gene for DNA polymerase kappa, complete cds Length = 11633 Score = 50.1 bits (25), Expect = 0.013 Identities = 28/29 (96%) Strand = Plus / Minus Query: 6 gggaagagagggagggaggaagaaagaag 34 ||||||||||||||||||| ||||||||| Sbjct: 9172 gggaagagagggagggagggagaaagaag 9144
>gb|AC091825.4| Homo sapiens chromosome 5 clone CTC-463A16, complete sequence Length = 200655 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 173772 ggaagagagggagggaggaagaaag 173796
>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence Length = 171133 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaag 31 ||||||||||||||||||||||||| Sbjct: 91284 ggaagagagggagggaggaagaaag 91260
>emb|AL671042.10| Mouse DNA sequence from clone RP23-382O24 on chromosome X, complete sequence Length = 186151 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Plus Query: 395 agttgaccttggaaatgcacaatta 419 ||||||||||||||||||||||||| Sbjct: 123664 agttgaccttggaaatgcacaatta 123688
>gb|AC183380.3| Pan troglodytes BAC clone CH251-605G19 from chromosome 7, complete sequence Length = 223844 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaa 30 |||||||||||||||||||||||| Sbjct: 84536 ggaagagagggagggaggaagaaa 84559
>gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, complete sequence Length = 176600 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaagaa 33 |||||||||||||||||||||||| Sbjct: 11909 agagagggagggaggaagaaagaa 11932
>gb|AC132268.3| Mus musculus BAC clone RP24-399H6 from chromosome 19, complete sequence Length = 191573 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaaga 28 |||||||||||||||||||||||| Sbjct: 34224 agggaagagagggagggaggaaga 34247
>gb|AC093485.4| Homo sapiens BAC clone RP13-554I5 from 7, complete sequence Length = 19198 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaa 30 |||||||||||||||||||||||| Sbjct: 11934 ggaagagagggagggaggaagaaa 11957
>gb|AC102677.9| Mus musculus chromosome 5, clone RP24-67M11, complete sequence Length = 167898 Score = 48.1 bits (24), Expect = 0.051 Identities = 27/28 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaag 34 ||||||||||||||||||||||| |||| Sbjct: 113300 ggaagagagggagggaggaagaaggaag 113327
>gb|AC027331.3| Homo sapiens chromosome 5 clone CTD-2163L6, complete sequence Length = 94376 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaaga 32 |||||||||||||||||||||||| Sbjct: 55831 aagagagggagggaggaagaaaga 55808
>gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosome 13, complete sequence Length = 168567 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaagaa 33 |||||||||||||||||||||||| Sbjct: 138881 agagagggagggaggaagaaagaa 138904
>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence Length = 167799 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaaga 32 |||||||||||||||||||||||| Sbjct: 150871 aagagagggagggaggaagaaaga 150894
>emb|AJ863559.1| Coffea canephora partial mRNA for somatic embryogenesis receptor-like kinase (serk gene) Length = 776 Score = 48.1 bits (24), Expect = 0.051 Identities = 36/40 (90%) Strand = Plus / Plus Query: 466 atttggagctttatagcaacaacataagtggcccaatacc 505 ||||||||||||| || || ||||||||||| |||||||| Sbjct: 3 atttggagctttacagtaataacataagtggaccaatacc 42
>dbj|BS000157.1| Pan troglodytes chromosome 22 clone:RP43-154K22, map 22, complete sequences Length = 192836 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaaga 28 |||||||||||||||||||||||| Sbjct: 17533 agggaagagagggagggaggaaga 17556
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 48.1 bits (24), Expect = 0.051 Identities = 27/28 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaag 34 ||||||||||||||||||||||| |||| Sbjct: 6912 ggaagagagggagggaggaagaaggaag 6939
>gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, complete sequence Length = 227454 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaagaa 33 |||||||||||||||||||||||| Sbjct: 174279 agagagggagggaggaagaaagaa 174302
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 48.1 bits (24), Expect = 0.051 Identities = 27/28 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaag 34 ||||| |||||||||||||||||||||| Sbjct: 139378 ggaagggagggagggaggaagaaagaag 139351
>gb|AC140299.2| Mus musculus BAC clone RP23-363J15 from 10, complete sequence Length = 201657 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Minus Query: 8 gaagagagggagggaggaagaaag 31 |||||||||||||||||||||||| Sbjct: 67893 gaagagagggagggaggaagaaag 67870
>gb|AC000116.1|HSAC000116 Human BAC clone GS259O10 from 5p15.2, complete sequence Length = 84383 Score = 48.1 bits (24), Expect = 0.051 Identities = 24/24 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaaga 32 |||||||||||||||||||||||| Sbjct: 45838 aagagagggagggaggaagaaaga 45815
>gb|AC189701.3| Pan troglodytes BAC clone CH251-144J1 from chromosome 7, complete sequence Length = 172012 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 75930 aagagagggagggaggaagaaag 75952
>ref|NM_105841.3| Arabidopsis thaliana SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase (SERK1) mRNA, complete cds Length = 2565 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Plus Query: 465 tatttggagctttatagcaacaacataagtggccc 499 |||||||||||||| || |||||||||| |||||| Sbjct: 706 tatttggagctttacagtaacaacataactggccc 740
>gb|AC158553.13| Mus musculus chromosome 8, clone RP23-349E13, complete sequence Length = 213309 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||||||||||| |||||||||||| Sbjct: 155551 ggaagagagggaggaaggaagaaagaa 155577
>gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, complete sequence Length = 124758 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||| ||||||||||||||||||||| Sbjct: 106774 ggaagggagggagggaggaagaaagaa 106748
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||| |||||||||||||||||||||| Sbjct: 121043 ggaaaagagggagggaggaagaaagaa 121017
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||| |||||||||||||||||||| Sbjct: 42780 ggaagaaagggagggaggaagaaagaa 42754
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||| |||||||||||||||||||| Sbjct: 148555 ggaagaaagggagggaggaagaaagaa 148529
>gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, complete sequence Length = 215745 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||| ||||||||||||||||||||| Sbjct: 152654 ggaagggagggagggaggaagaaagaa 152628
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaa 29 ||||||||||||||||||||||| Sbjct: 23016 ggaagagagggagggaggaagaa 23038
>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence Length = 196560 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 83835 aagagagggagggaggaagaaag 83813
>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete sequence Length = 210128 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 44523 agggaagagagggagggaggaag 44545
>gb|AC084730.2| Papio anubis clone RP41-479B1, complete sequence Length = 166929 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 85882 agggaagagagggagggaggaag 85904
>gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome 6, complete sequence Length = 154613 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaa 29 ||||||||||||||||||||||| Sbjct: 61482 ggaagagagggagggaggaagaa 61504
>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence Length = 96063 Score = 46.1 bits (23), Expect = 0.20 Identities = 44/51 (86%) Strand = Plus / Minus Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaac 374 |||||||| || || |||| |||||||| ||||||||||| ||||||||| Sbjct: 67231 tgggatccgaccctagttagtccttgtacttggtttcatgtcacatgtaac 67181
>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete sequence Length = 200910 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaa 29 ||||||||||||||||||||||| Sbjct: 151047 ggaagagagggagggaggaagaa 151069
>gb|AC102102.7| Mus musculus chromosome 16, clone RP23-79F12, complete sequence Length = 194828 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 21355 agggaagagagggagggaggaag 21377
>gb|AF129075.3| Homo sapiens chromosome 21 clone RP1-100J12, Rp1-P79E4 map q21.3-22.11, complete sequence Length = 190837 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 105534 agggaagagagggagggaggaag 105556
>gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence Length = 221526 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||||||||||||| |||||||||| Sbjct: 195765 ggaagagagggagggaagaagaaagaa 195791
>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete sequence Length = 179813 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaaga 32 ||||||||||||||||||||||| Sbjct: 87103 agagagggagggaggaagaaaga 87081
>gb|AC123965.3| Macaca mulatta clone CH250-564L7, complete sequence Length = 113368 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 3888 agggaagagagggagggaggaag 3910
>gb|AC124158.3| Macaca mulatta clone CH250-337A5, complete sequence Length = 173421 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 164950 agggaagagagggagggaggaag 164972
>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence Length = 204620 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||||||||||||||||||| ||||| Sbjct: 186976 ggaagagagggagggaggaaggaagaa 186950 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaagaag 34 |||| |||||||||||||||||||| Sbjct: 63819 agagggggagggaggaagaaagaag 63795 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaag 27 ||||||||||||||||||||| Sbjct: 73677 ggaagagagggagggaggaag 73697
>gb|AC163719.4| Mus musculus BAC clone RP23-421M6 from chromosome 9, complete sequence Length = 177404 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||||||||||||||||||| ||||| Sbjct: 2763 ggaagagagggagggaggaaggaagaa 2737
>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence Length = 166581 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gggaagagagggagggaggaaga 28 ||||||||||||||||||||||| Sbjct: 163897 gggaagagagggagggaggaaga 163875
>emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chromosome 16, complete sequence Length = 233599 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 13 gagggagggaggaagaaagaaga 35 ||||||||||||||||||||||| Sbjct: 100883 gagggagggaggaagaaagaaga 100905
>gb|AC156984.9| Mus musculus chromosome 5, clone RP23-418H8, complete sequence Length = 171080 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaaga 28 ||||||||||||||||||||||| Sbjct: 98402 gggaagagagggagggaggaaga 98424
>emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049 Length = 340000 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 105698 agggaagagagggagggaggaag 105720
>gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complete sequence Length = 210563 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaaga 35 ||||||||||||||||||||||| Sbjct: 24606 gagggagggaggaagaaagaaga 24584
>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete sequence Length = 159845 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 709 ttctgagttgtaacagttcttgtgctg 735 ||||||||||| ||||||||||||||| Sbjct: 69783 ttctgagttgtcacagttcttgtgctg 69757
>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete sequence Length = 121958 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 9155 aagagagggagggaggaagaaag 9177
>emb|AL356057.12| Human DNA sequence from clone RP11-474L11 on chromosome 6 contains the 5' end of the SUSP1 gene for SUMO-1-specific protease, the 5' end of a novel gene, a pseudogene similar to part of FLJ14463 and a CpG island, complete sequence Length = 184909 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaagaaga 35 ||||||||||||||| ||||||||||| Sbjct: 130565 aagagagggagggagaaagaaagaaga 130591
>emb|AL135783.6| Human DNA sequence from clone RP3-527F8 on chromosome Xq25-27.1 Contains the TNFSF5 gene for tumor necrosis factor (ligand) superfamily (member 5 ,hyper-IgM syndrome), a novel gene, the 3' end of the ARHGEF6 gene for Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 and a CpG island, complete sequence Length = 175706 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||||||||| |||||||||||||| Sbjct: 169275 ggaagagagggaaggaggaagaaagaa 169301
>gb|BC027954.1| Homo sapiens T cell receptor gamma variable 7, mRNA (cDNA clone MGC:34839 IMAGE:5210958), complete cds Length = 2476 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 1280 aagagagggagggaggaagaaag 1258
>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence Length = 140691 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 39677 aagagagggagggaggaagaaag 39655
>gb|AY048200.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 2462 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Plus Query: 465 tatttggagctttatagcaacaacataagtggccc 499 |||||||||||||| || |||||||||| |||||| Sbjct: 706 tatttggagctttacagtaacaacataactggccc 740
>emb|AL645749.6| Mouse DNA sequence from clone RP23-195A2 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 54152 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaagaaga 35 |||||||||||||||| |||||||||| Sbjct: 29953 aagagagggagggagggagaaagaaga 29927
>gb|AC154703.2| Mus musculus BAC clone RP24-349H1 from chromosome 14, complete sequence Length = 154588 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||||||||||||| |||||||||| Sbjct: 105786 ggaagagagggagggaagaagaaagaa 105760
>gb|AC018366.39| Mus musculus strain 129/SvJ chromosome 5 clone mgs1-458e5, complete sequence Length = 126143 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gggaagagagggagggaggaaga 28 ||||||||||||||||||||||| Sbjct: 63053 gggaagagagggagggaggaaga 63031
>gb|AC092660.2| Homo sapiens BAC clone RP11-502A5 from 2, complete sequence Length = 154704 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaa 29 ||||||||||||||||||||||| Sbjct: 127903 ggaagagagggagggaggaagaa 127925
>dbj|BS000171.1| Pan troglodytes chromosome 22 clone:PTB-086M04, map 22, complete sequences Length = 218680 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 8843 agggaagagagggagggaggaag 8865
>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence Length = 201682 Score = 46.1 bits (23), Expect = 0.20 Identities = 29/31 (93%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaagaaagaaga 35 ||||||| |||||||||||| |||||||||| Sbjct: 86728 agggaagggagggagggagggagaaagaaga 86758
>gb|AC104776.5| Homo sapiens BAC clone RP11-16J22 from 2, complete sequence Length = 50988 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaa 29 ||||||||||||||||||||||| Sbjct: 43174 ggaagagagggagggaggaagaa 43152
>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence Length = 124069 Score = 46.1 bits (23), Expect = 0.20 Identities = 44/51 (86%) Strand = Plus / Plus Query: 324 tgggatcccactcttgttaacccttgtacatggtttcatgttacatgtaac 374 |||||||| || || |||| |||||||| ||||||||||| ||||||||| Sbjct: 86645 tgggatccgaccctagttagtccttgtacttggtttcatgtcacatgtaac 86695
>gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 map 5, complete sequence Length = 117052 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaaga 28 ||||||||||||||||||||||| Sbjct: 19323 gggaagagagggagggaggaaga 19345
>gb|BT002217.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 1878 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Plus Query: 465 tatttggagctttatagcaacaacataagtggccc 499 |||||||||||||| || |||||||||| |||||| Sbjct: 289 tatttggagctttacagtaacaacataactggccc 323
>gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, complete sequence Length = 196385 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaaga 35 ||||||||||||||||||||||| Sbjct: 17958 gagggagggaggaagaaagaaga 17936
>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence Length = 157053 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||||||||||||||||||| ||||| Sbjct: 14037 ggaagagagggagggaggaaggaagaa 14063
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 |||||| |||||||||||||||||||| Sbjct: 72629 ggaagaaagggagggaggaagaaagaa 72603
>emb|X05706.1|RNL35AP4 Rat DNA for ribosomal protein L35a related pseudogene Length = 631 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||| ||||||||||||||||||||| Sbjct: 529 ggaagggagggagggaggaagaaagaa 555
>emb|AL928800.5| Zebrafish DNA sequence from clone CH211-233G21 in linkage group 1, complete sequence Length = 153880 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||| ||||||||||||||||||||| Sbjct: 123852 ggaagggagggagggaggaagaaagaa 123826
>gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complete sequence Length = 168141 Score = 46.1 bits (23), Expect = 0.20 Identities = 29/31 (93%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaagaaagaaga 35 ||||||||||||||||||||| || |||||| Sbjct: 75732 agggaagagagggagggaggaggagagaaga 75762
>gb|AC154292.1| Mus musculus BAC clone RP24-488N1 from 16, complete sequence Length = 192613 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 64109 agggaagagagggagggaggaag 64087
>gb|AF057177.1|AF057177 Homo sapiens T-cell receptor gamma V1 gene region Length = 53221 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 aagagagggagggaggaagaaag 31 ||||||||||||||||||||||| Sbjct: 39677 aagagagggagggaggaagaaag 39655
>gb|AC126694.4| Mus musculus BAC clone RP23-310G20 from 17, complete sequence Length = 232041 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 180100 agggaagagagggagggaggaag 180078
>gb|U93048.1|DCU93048 Daucus carota somatic embryogenesis receptor-like kinase mRNA, complete cds Length = 1755 Score = 46.1 bits (23), Expect = 0.20 Identities = 32/35 (91%) Strand = Plus / Plus Query: 468 ttggagctttatagcaacaacataagtggcccaat 502 ||||||||||| ||||| ||||||||||| ||||| Sbjct: 115 ttggagctttacagcaataacataagtggaccaat 149
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaaga 28 ||||||||||||||||||||||| Sbjct: 178142 gggaagagagggagggaggaaga 178164
>emb|AL929398.4| Mouse DNA sequence from clone RP24-315P22 on chromosome 11, complete sequence Length = 64491 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaaga 32 ||||||||||||||||||||||| Sbjct: 49885 agagagggagggaggaagaaaga 49907
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 agggaagagagggagggaggaag 27 ||||||||||||||||||||||| Sbjct: 43856 agggaagagagggagggaggaag 43834
>emb|AL627446.12| Mouse DNA sequence from clone RP23-211F22 on chromosome 4, complete sequence Length = 103091 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaagaa 33 ||||| ||||||||||||||||||||| Sbjct: 24788 ggaagggagggagggaggaagaaagaa 24762
>gb|AC187533.2| Callithrix jacchus BAC clone CH259-75H12 from chromosome unknown, complete sequence Length = 201955 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 80654 ggaagagagggagggaggaaga 80675
>gb|AC145336.19| Pan troglodytes clone rp43-33e5, complete sequence Length = 155318 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 tagggaagagagggagggagga 25 |||||||||||||||||||||| Sbjct: 56142 tagggaagagagggagggagga 56163
>emb|CT842131.9| Pig DNA sequence from clone CH242-230E18 on chromosome 7, complete sequence Length = 185942 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaag 34 |||||||||||||||||||||| Sbjct: 182072 gagggagggaggaagaaagaag 182051
>emb|CT010469.16| Mouse DNA sequence from clone RP23-312F19 on chromosome 17, complete sequence Length = 131794 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 48686 agagagggagggaggaagaaag 48665
>dbj|AK226573.1| Arabidopsis thaliana mRNA for putative receptor protein kinase, complete cds, clone: RAFL07-13-F17 Length = 2842 Score = 44.1 bits (22), Expect = 0.79 Identities = 52/62 (83%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 ||||||||| | || || |||||| | |||||||||| || ||||| |||||||||||| Sbjct: 145 aacaatgtactccaaagctgggatgctactcttgttactccatgtacttggtttcatgtt 204 Query: 366 ac 367 || Sbjct: 205 ac 206
>gb|AC159041.2| Pan troglodytes BAC clone CH251-35C17 from chromosome unknown, complete sequence Length = 158659 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 tagggaagagagggagggagga 25 |||||||||||||||||||||| Sbjct: 144954 tagggaagagagggagggagga 144975
>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence Length = 204286 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 55778 agagagggagggaggaagaaag 55757
>gb|DQ483854.1| Gymnogyps californianus contig 20G genomic sequence Length = 643 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 383 ggaagagagggagggaggaaga 362
>ref|NM_126955.3| Arabidopsis thaliana ATSERK4; protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase (ATSERK4) mRNA, complete cds Length = 2219 Score = 44.1 bits (22), Expect = 0.79 Identities = 52/62 (83%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 ||||||||| | || || |||||| | |||||||||| || ||||| |||||||||||| Sbjct: 292 aacaatgtactccaaagctgggatgctactcttgttactccatgtacttggtttcatgtt 351 Query: 366 ac 367 || Sbjct: 352 ac 353
>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence Length = 206083 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 gagagggagggaggaagaaaga 32 |||||||||||||||||||||| Sbjct: 175326 gagagggagggaggaagaaaga 175347
>gb|AC154193.2| Mus musculus BAC clone RP24-398A6 from chromosome 14, complete sequence Length = 161686 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaa 26 |||||||||||||||||||||| Sbjct: 770 agggaagagagggagggaggaa 791
>gb|AC163020.9| Mus musculus chromosome 7, clone RP23-36L11, complete sequence Length = 215384 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||| |||||||||| Sbjct: 193902 ggaagagagggaggggggaagaaaga 193927
>gb|AC114667.12| Mus musculus chromosome 1, clone RP24-175L10, complete sequence Length = 171306 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 attagggaagagagggagggag 23 |||||||||||||||||||||| Sbjct: 99950 attagggaagagagggagggag 99971
>gb|AC115898.22| Mus musculus chromosome 7, clone RP24-444C13, complete sequence Length = 177754 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||| |||||||||| Sbjct: 91280 ggaagagagggaggggggaagaaaga 91255
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 84943 agagagggagggaggaagaaag 84922
>gb|AC154465.2| Mus musculus BAC clone RP24-146O1 from chromosome 14, complete sequence Length = 189186 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 29488 ggaagagagggagggaggaaga 29467
>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete sequence Length = 155876 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 gagggagggaggaagaaagaag 34 |||||||||||||||||||||| Sbjct: 155757 gagggagggaggaagaaagaag 155778
>gb|AC113053.21| Mus musculus chromosome 17, clone RP23-250J2, complete sequence Length = 234124 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 gaagagagggagggaggaagaaagaa 33 |||| ||||||||||||||||||||| Sbjct: 120019 gaagggagggagggaggaagaaagaa 119994
>gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, complete sequence Length = 168136 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||| ||||||||||||||||| Sbjct: 134442 ggaagagaaggagggaggaagaaaga 134467
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence Length = 202580 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaag 27 |||||||||||||||||||||| Sbjct: 14863 gggaagagagggagggaggaag 14884
>gb|AC140269.3| Mus musculus BAC clone RP23-322I5 from chromosome 3, complete sequence Length = 205887 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 31677 agagagggagggaggaagaaag 31656
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 49154 ggaagagagggagggaggaaggaaga 49179
>gb|AC137128.17| Mus musculus chromosome 3, clone RP24-271G16, complete sequence Length = 182140 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||||||||||||| ||||||| Sbjct: 92551 ggaagagagggagggagggagaaaga 92576
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 117205 ggaagagagggagggaggaaga 117184
>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence Length = 171059 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 gagagggagggaggaagaaaga 32 |||||||||||||||||||||| Sbjct: 33119 gagagggagggaggaagaaaga 33098
>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete sequence Length = 186205 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||||||||||| ||||||||| Sbjct: 13802 ggaagagagggagggaagaagaaaga 13777
>gb|AC134859.4| Mus musculus BAC clone RP23-363G20 from chromosome 9, complete sequence Length = 182883 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agagggagggaggaagaaagaa 33 |||||||||||||||||||||| Sbjct: 114073 agagggagggaggaagaaagaa 114052
>gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, complete sequence Length = 222820 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaa 26 |||||||||||||||||||||| Sbjct: 14412 agggaagagagggagggaggaa 14433
>gb|AY587764.1| Homo sapiens opioid receptor, mu 1 (OPRM1) gene, complete cds Length = 83889 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 agagggagggaggaagaaagaa 33 |||||||||||||||||||||| Sbjct: 62065 agagggagggaggaagaaagaa 62086
>gb|AC099604.4| Mus musculus chromosome 1, clone RP23-335B22, complete sequence Length = 197338 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 122248 agagagggagggaggaagaaag 122269
>gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome 12, complete sequence Length = 224632 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||||||||||||| ||||||| Sbjct: 129309 ggaagagagggagggagggagaaaga 129334 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 gaagagagggagggaggaaga 28 ||||||||||||||||||||| Sbjct: 129294 gaagagagggagggaggaaga 129314
>gb|AC134439.4| Mus musculus BAC clone RP24-494I18 from chromosome 13, complete sequence Length = 133093 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 91813 agagagggagggaggaagaaag 91792
>gb|AC102503.8| Mus musculus chromosome 16, clone RP24-383M8, complete sequence Length = 220467 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaagaaga 35 |||||||||||||||| ||||||||| Sbjct: 116152 agagagggagggaggaggaaagaaga 116177
>gb|AC125467.4| Mus musculus BAC clone RP24-91P24 from chromosome 8, complete sequence Length = 200304 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||| ||||||||||||||||||| Sbjct: 141515 ggaagaaagggagggaggaagaaaga 141490
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaag 27 |||||||||||||||||||||| Sbjct: 178578 gggaagagagggagggaggaag 178599
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaagaaga 35 ||||||||||||||||||| |||||| Sbjct: 96056 agagagggagggaggaagagagaaga 96031
>gb|AC123921.3| Mus musculus BAC clone RP24-180J14 from chromosome 8, complete sequence Length = 183936 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 78857 ggaagagagggagggaggaaga 78878 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaag 27 ||||||||||||||||||||| Sbjct: 78873 ggaagagagggagggaggaag 78893
>gb|AC129299.3| Mus musculus BAC clone RP24-420E16 from chromosome 14, complete sequence Length = 156372 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 126833 ggaagagagggagggaggaaggaaga 126808
>gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome 6, complete sequence Length = 192062 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 172077 agagagggagggaggaagaaag 172056
>gb|AC121859.2| Mus musculus BAC clone RP24-104F15 from 6, complete sequence Length = 205084 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 186639 agagagggagggaggaagaaag 186660
>gb|AC110514.9| Mus musculus chromosome 17, clone RP23-363P16, complete sequence Length = 171261 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaag 34 |||||||||||||||||||||| Sbjct: 92441 gagggagggaggaagaaagaag 92420
>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence Length = 213683 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||||||||||| ||||||||| Sbjct: 106188 ggaagagagggagggaagaagaaaga 106163
>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence Length = 261979 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 213866 agagagggagggaggaagaaag 213887
>gb|AC153015.4| Mus musculus BAC clone RP23-200I3 from chromosome 8, complete sequence Length = 232038 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||| ||||||||||||||||||| Sbjct: 161598 ggaagaaagggagggaggaagaaaga 161623
>gb|AC163440.3| Mus musculus chromosome 1, clone RP23-445K8, complete sequence Length = 194714 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 attagggaagagagggagggag 23 |||||||||||||||||||||| Sbjct: 186749 attagggaagagagggagggag 186728
>gb|AC091507.2| Sus scrofa clone RP44-397B10, complete sequence Length = 174031 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 92509 ggaagagagggagggaggaaggaaga 92534
>gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, complete sequence Length = 147858 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 78313 ggaagagagggagggaggaaga 78334
>gb|AC125503.3| Oryctolagus cuniculus clone LB1-115H21, complete sequence Length = 176296 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 agagggagggaggaagaaagaa 33 |||||||||||||||||||||| Sbjct: 116923 agagggagggaggaagaaagaa 116944
>gb|AC112499.8| Homo sapiens X BAC RP11-2N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136876 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaagaaga 35 |||||||||||||||||||| ||||| Sbjct: 65904 agagagggagggaggaagaaggaaga 65929
>gb|AC158799.8| Mus musculus BAC RP24-430K11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161705 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaag 34 |||||||||||||||||||||| Sbjct: 124876 gagggagggaggaagaaagaag 124855
>gb|AY056243.1| Arabidopsis thaliana unknown protein (At2g13780) mRNA, complete cds Length = 2070 Score = 44.1 bits (22), Expect = 0.79 Identities = 52/62 (83%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 ||||||||| | || || |||||| | |||||||||| || ||||| |||||||||||| Sbjct: 175 aacaatgtactccaaagctgggatgctactcttgttactccatgtacttggtttcatgtt 234 Query: 366 ac 367 || Sbjct: 235 ac 236
>gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, complete sequence Length = 207258 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 |||||||||||||||| ||||||||| Sbjct: 122874 ggaagagagggagggaagaagaaaga 122849
>gb|AC101973.7| Mus musculus chromosome 3, clone RP24-280A2, complete sequence Length = 175396 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agagggagggaggaagaaagaa 33 |||||||||||||||||||||| Sbjct: 73269 agagggagggaggaagaaagaa 73248
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 atcaacggcgacgcggcggccc 66 |||||||||||||||||||||| Sbjct: 3436774 atcaacggcgacgcggcggccc 3436795
>gb|AC026101.24| Homo sapiens 3 BAC RP11-441D23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164728 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gaagagagggagggaggaagaaagaa 33 |||| ||||||||||||||||||||| Sbjct: 117075 gaagggagggagggaggaagaaagaa 117100
>gb|AC113372.2| Homo sapiens chromosome 5 clone RP11-160H11, complete sequence Length = 98328 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||| |||||||| Sbjct: 25724 ggaagagagggagggagaaagaaaga 25749
>gb|AC007982.2| Homo sapiens chromosome 17, clone RP11-44H5, complete sequence Length = 186360 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaag 27 |||||||||||||||||||||| Sbjct: 165158 gggaagagagggagggaggaag 165179
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 49426 ggaagagagggagggaggaaga 49447
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 44.1 bits (22), Expect = 0.79 Identities = 52/62 (83%) Strand = Plus / Plus Query: 306 aacaatgtattgcagagttgggatcccactcttgttaacccttgtacatggtttcatgtt 365 ||||||||| | || || |||||| | |||||||||| || ||||| |||||||||||| Sbjct: 50470 aacaatgtactccaaagctgggatgctactcttgttactccatgtacttggtttcatgtt 50529 Query: 366 ac 367 || Sbjct: 50530 ac 50531
>gb|AC110778.4| Homo sapiens BAC clone RP11-320L7 from 4, complete sequence Length = 98569 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 agggaagagagggagggaggaagaaa 30 |||||||| ||||||||||||||||| Sbjct: 14500 agggaagaaagggagggaggaagaaa 14525
>gb|AC104580.5| Homo sapiens chromosome 8, clone RP11-1084G15, complete sequence Length = 179270 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 98336 ggaagagagggagggaggaaga 98357
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence Length = 151389 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaagaaga 35 |||||||||||||||||| ||||||| Sbjct: 22676 agagagggagggaggaaggaagaaga 22651
>gb|AC092373.2| Homo sapiens chromosome 5 clone RP11-5P22, complete sequence Length = 180941 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 73818 agagagggagggaggaagaaag 73839
>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence Length = 187574 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 32668 agagagggagggaggaagaaag 32647
>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence Length = 161775 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 47772 agagagggagggaggaagaaag 47751
>emb|AL513262.7| Human DNA sequence from clone RP11-499I15 on chromosome 1, complete sequence Length = 41502 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 11785 agagagggagggaggaagaaag 11806
>emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on chromosome 6 Contains the 3' end of the STX7 gene for syntaxin 7, the 5' end of the MOXD1 gene for monooxygenase DBH-like 1 and two CpG islands, complete sequence Length = 127703 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 42822 ggaagagagggagggaggaaggaaga 42797 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaag 27 ||||||||||||||||||||| Sbjct: 42857 ggaagagagggagggaggaag 42837
>emb|AL356476.13| Human DNA sequence from clone RP11-655H13 on chromosome 10 Contains a mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5) pseudogene and a novel gene, complete sequence Length = 184510 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 30680 ggaagagagggagggaggaaga 30701 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 30696 ggaagagagggagggaggaaga 30717
>emb|AL136444.15| Human DNA sequence from clone RP3-366F13 on chromosome 6 Contains the OPRM1 gene for opioid receptor, mu 1 (MOR-1) and a CpG island, complete sequence Length = 96310 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 agagggagggaggaagaaagaa 33 |||||||||||||||||||||| Sbjct: 3532 agagggagggaggaagaaagaa 3511
>emb|AL008723.8|HS90G24 Human DNA sequence from clone RP1-90G24 on chromosome 22 Contains the 5' end of a novel gene, the RFPL2 gene for ret finger protein-like 2, a Immunoglobulin Lambda Light Chain C region (IGLC) pseudogene (IGLCOR22-1), the SLC5A4 gene for solute carrier family 5 (low affinity glucose cotransporter), member 4 and a pseudogene similar to part of cleavage and polyadenylation specific factor 1, 160kDa (CPSF1), complete sequence Length = 154414 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 tagggaagagagggagggagga 25 |||||||||||||||||||||| Sbjct: 123438 tagggaagagagggagggagga 123417
>gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chromosome unknown, complete sequence Length = 183880 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 tagggaagagagggagggagga 25 |||||||||||||||||||||| Sbjct: 182844 tagggaagagagggagggagga 182823
>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence Length = 199337 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 88937 ggaagagagggagggaggaaggaaga 88912
>gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome 3, complete sequence Length = 191517 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 107183 ggaagagagggagggaggaaggaaga 107158
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||||||||||||||||||| |||| Sbjct: 71844 ggaagagagggagggaggaaggaaga 71819 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 gagggagggaggaagaaagaa 33 ||||||||||||||||||||| Sbjct: 92078 gagggagggaggaagaaagaa 92098
>gb|AC025211.8| Homo sapiens chromosome , clone RP11-220C2, complete sequence Length = 150794 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 gggaagagagggagggaggaag 27 |||||||||||||||||||||| Sbjct: 136974 gggaagagagggagggaggaag 136953
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 gcggtgttggggggtgggaggt 195 |||||||||||||||||||||| Sbjct: 237863 gcggtgttggggggtgggaggt 237842
>emb|AL645842.15| Mouse DNA sequence from clone RP23-20A9 on chromosome 11 Contains two novel genes and the 3' end of the Accn1 gene for neuronal amiloride-sensitive cation channel 1 (degenerin), complete sequence Length = 114190 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gggaagagagggagggaggaag 27 |||||||||||||||||||||| Sbjct: 22817 gggaagagagggagggaggaag 22838
>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a novel gene, the Nos2 gene for inducible macrophage nitric oxide synthase 2 and the 3' end of the Lgals9 gene for soluble galactose binding lectin 9, complete sequence Length = 178443 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 118127 ggaagagagggagggaggaaga 118106
>emb|AL935149.16| Mouse DNA sequence from clone RP23-70N3 on chromosome 2, complete sequence Length = 122010 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 gagagggagggaggaagaaaga 32 |||||||||||||||||||||| Sbjct: 483 gagagggagggaggaagaaaga 504
>gb|AC022298.31|AC022298 Mus musculus BAC RP23-423C8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 112209 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 74962 ggaagagagggagggaggaaga 74983
>gb|AC119977.18| Mus musculus chromosome 5, clone RP24-486F14, complete sequence Length = 151580 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 6874 ggaagagagggagggaggaaga 6853
>gb|AC145339.34| Pan troglodytes clone rp43-58e4, complete sequence Length = 150845 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 tagggaagagagggagggagga 25 |||||||||||||||||||||| Sbjct: 103809 tagggaagagagggagggagga 103830
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence Length = 202303 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 agggaagagagggagggaggaa 26 |||||||||||||||||||||| Sbjct: 19004 agggaagagagggagggaggaa 18983
>gb|AC149590.5| Mus musculus BAC clone RP23-348L9 from chromosome 5, complete sequence Length = 196662 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 107203 agagagggagggaggaagaaag 107224 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaag 31 ||||| ||||||||||||||||||| Sbjct: 107321 ggaagggagggagggaggaagaaag 107345
>gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179714 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 gagagggagggaggaagaaagaagac 36 |||||| ||||||||||||||||||| Sbjct: 154804 gagaggaagggaggaagaaagaagac 154829
>gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111104 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 38177 ggaagagagggagggaggaaga 38156 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 38193 ggaagagagggagggaggaaga 38172
>gb|AC017076.14| Homo sapiens BAC clone RP11-439M11 from 2, complete sequence Length = 118808 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 13175 agagagggagggaggaagaaag 13196
>ref|NM_001008885.1| Rattus norvegicus RT1 class I, locus Ke4 (RT1-Ke4), mRNA Length = 2235 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 gcggtgttggggggtgggaggt 195 |||||||||||||||||||||| Sbjct: 123 gcggtgttggggggtgggaggt 144
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 87472 ggaagagagggagggaggaaga 87451
>gb|AC010451.9| Homo sapiens chromosome 5 clone CTD-2247C11, complete sequence Length = 159853 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 gagggagggaggaagaaagaag 34 |||||||||||||||||||||| Sbjct: 39767 gagggagggaggaagaaagaag 39746
>gb|AC021646.35| Homo sapiens 12 BAC RP11-511B23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165089 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 35739 ggaagagagggagggaggaaga 35760
>gb|AC007690.12| Homo sapiens 3 BAC RP11-42D20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181531 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||| |||||||||||||||||||| Sbjct: 96600 ggaagggagggagggaggaagaaaga 96625
>gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, complete sequence Length = 139076 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 agggaagagagggagggaggaa 26 |||||||||||||||||||||| Sbjct: 72019 agggaagagagggagggaggaa 71998
>gb|AY150801.1| Rhodospirillum rubrum strain S1 carotenoid gene cluster, partial sequence Length = 21929 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 atcaacggcgacgcggcggccc 66 |||||||||||||||||||||| Sbjct: 17230 atcaacggcgacgcggcggccc 17209
>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence Length = 225977 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 206732 agagagggagggaggaagaaag 206711 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaagaaag 31 ||||| ||||||||||||||||||| Sbjct: 206614 ggaagggagggagggaggaagaaag 206590
>gb|AC009134.6|AC009134 Homo sapiens chromosome 16 clone RP11-505I1, complete sequence Length = 193236 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 15512 ggaagagagggagggaggaaga 15491
>emb|BX572626.6| Mouse DNA sequence from clone RP24-408L19 on chromosome X, complete sequence Length = 155849 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaagaaaga 32 ||||| |||||||||||||||||||| Sbjct: 94374 ggaagggagggagggaggaagaaaga 94399
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 44.1 bits (22), Expect = 0.79 Identities = 43/50 (86%) Strand = Plus / Plus Query: 321 agttgggatcccactcttgttaacccttgtacatggtttcatgttacatg 370 ||||||||| | || ||||| || || || |||||||||||||||||||| Sbjct: 34412 agttgggatgctacccttgtcaatccctgcacatggtttcatgttacatg 34461
>gb|AC114591.15| Mus musculus chromosome 7, clone RP23-478G2, complete sequence Length = 212299 Score = 44.1 bits (22), Expect = 0.79 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 aagagagggagggaggaagaaagaag 34 ||||| |||||||||||||||||||| Sbjct: 64058 aagagggggagggaggaagaaagaag 64083
>gb|AC107453.14| Mus musculus chromosome 15, clone RP23-315F3, complete sequence Length = 193381 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 89323 agagagggagggaggaagaaag 89344
>gb|U91325.1|HSU91325 Human chromosome 16p13.11 BAC clone CIT987SK-731F11 complete sequence Length = 135046 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 117117 ggaagagagggagggaggaaga 117138
>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence Length = 175751 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 168115 ggaagagagggagggaggaaga 168094
>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence Length = 196361 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 64188 agagagggagggaggaagaaag 64209
>gb|AC122495.4| Mus musculus BAC clone RP24-397P10 from 9, complete sequence Length = 175838 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 81221 ggaagagagggagggaggaaga 81242
>gb|AC137148.14| Mus musculus chromosome 19, clone RP24-210C4, complete sequence Length = 168235 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 32105 agagagggagggaggaagaaag 32126
>emb|AJ297549.1|HSA297549 Homo sapiens partial PIK3CB gene for phosphatidylinositol 3-kinase catalytic subunit p110beta, exons 1-2 and joined CDS Length = 8890 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 4897 ggaagagagggagggaggaaga 4876 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 4913 ggaagagagggagggaggaaga 4892
>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165126 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 agagagggagggaggaagaaag 31 |||||||||||||||||||||| Sbjct: 88825 agagagggagggaggaagaaag 88846
>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168193 Score = 44.1 bits (22), Expect = 0.79 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ggaagagagggagggaggaaga 28 |||||||||||||||||||||| Sbjct: 88731 ggaagagagggagggaggaaga 88752 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 152,696,369 Number of extensions: 9116773 Number of successful extensions: 310781 Number of sequences better than 10.0: 694 Number of HSP's gapped: 310768 Number of HSP's successfully gapped: 751 Length of query: 831 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 809 Effective length of database: 18,508,616,841 Effective search space: 14973471024369 Effective search space used: 14973471024369 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
