ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf70a02 |
|---|---|
| Clone Library Name | barley_pub |
>Q5BIR3:THSD1_BOVIN Thrombospondin type-1 domain-containing protein 1 precursor - Bos| taurus (Bovine) Length = 849 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 29 GI*ICLFGDTSHVATMVITLQHLLGRTSQCSIPS 130 GI +CLF VAT++ITL LGR +CS P+ Sbjct: 419 GISLCLF---IIVATVLITLWRKLGRAPKCSTPA 449
>Q9PLQ3:Y042_CHLMU Uncharacterized protein TC_0042 - Chlamydia muridarum| Length = 283 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -3 Query: 233 KLSSKQEPLGHGTGRRGKRMKHNVTRSS 150 K SSKQE L HG+GR R H +RSS Sbjct: 41 KSSSKQEKLDHGSGRTSSR--HETSRSS 66
>Q8A521:ATKC_BACTN Potassium-transporting ATPase C chain - Bacteroides| thetaiotaomicron Length = 189 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +1 Query: 37 NLFVW*HKSCCNHGYYSPTSIGTNKPMFHPQQLG-MQIRLDLVTLCFIRLPLRPVP 201 +++ W SC GY + +S G+NK +P+ L ++ R+D + L + VP Sbjct: 62 DIYFWGRPSCAGDGYDASSSSGSNKGPTNPEYLAEVEARIDTFLVHHPYLSRKDVP 117
>P06420:VE1_HPV08 Replication protein E1 - Human papillomavirus type 8| Length = 603 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = -2 Query: 321 TQPFEGYGTCTSLYFVCLYFVSVIYKSRSEVIKQ 220 T+ F+ Y TC + + V Y V +Y+S ++++Q Sbjct: 181 TRQFKSYKTCCNYWVVAAYAVHDVYESSKQLLQQ 214
>Q1L5Z9:LONF2_HUMAN LON peptidase N-terminal domain and RING finger protein 2 - Homo| sapiens (Human) Length = 754 Score = 29.3 bits (64), Expect = 4.3 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 308 KAMAHAPHCTLCACTLSQLYTNHEVKLSSKQEPL 207 + + HAPHC LC LS+L + ++ E L Sbjct: 475 RCLDHAPHCPLCKDKLSELLASRNFNITVLAEEL 508
>Q5R7R7:THSD1_PONPY Thrombospondin type-1 domain-containing protein 1 precursor - Pongo| pygmaeus (Orangutan) Length = 853 Score = 28.9 bits (63), Expect = 5.6 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +2 Query: 29 GI*ICLFGDTSHVATMVITLQHLLGRTSQCSIPS 130 GI +CLF +AT++ITL GR ++CS P+ Sbjct: 420 GISLCLF---IIIATVLITLWRRFGRPAKCSTPA 450
>Q9NS62:THSD1_HUMAN Thrombospondin type-1 domain-containing protein 1 precursor - Homo| sapiens (Human) Length = 852 Score = 28.9 bits (63), Expect = 5.6 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +2 Query: 29 GI*ICLFGDTSHVATMVITLQHLLGRTSQCSIPS 130 GI +CLF +AT++ITL GR ++CS P+ Sbjct: 419 GISLCLF---IIIATVLITLWRRFGRPAKCSTPA 449
>P33215:NEDD1_MOUSE Protein NEDD1 - Mus musculus (Mouse)| Length = 660 Score = 28.9 bits (63), Expect = 5.6 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = -3 Query: 284 CTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTRSSLI 144 C + + +LS H V ++ P GHG+ + + +K+++ R SL+ Sbjct: 132 CYIASGSLSGEIILHSVTTNTSSTPFGHGSKQPIRHIKYSLFRKSLL 178
>Q96MT4:CF195_HUMAN Uncharacterized protein C6orf195 - Homo sapiens (Human)| Length = 127 Score = 28.5 bits (62), Expect = 7.3 Identities = 14/49 (28%), Positives = 23/49 (46%) Frame = -2 Query: 153 QPDLHPQLLGMEHWLVRPNRCWRVITMVAT*LVSPNKQIQMPQPQNEIC 7 QP P L G++H + C+R+++ + LV N + P P C Sbjct: 38 QPGARPALRGLQH----ASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCC 82
>Q8NHV4:NEDD1_HUMAN Protein NEDD1 - Homo sapiens (Human)| Length = 660 Score = 28.5 bits (62), Expect = 7.3 Identities = 12/47 (25%), Positives = 25/47 (53%) Frame = -3 Query: 284 CTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTRSSLI 144 C + + +LS H V + P GHG+ + + +K+++ + SL+ Sbjct: 132 CYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLL 178
>Q16549:PCSK7_HUMAN Proprotein convertase subtilisin/kexin type 7 precursor - Homo| sapiens (Human) Length = 785 Score = 28.1 bits (61), Expect = 9.5 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = -2 Query: 294 CTSLYFVCLYFVSVIYKSRSEVIKQARTSGPWHWSKR 184 C ++++ Y + V R+ Q SGP HW R Sbjct: 673 CFTVFWTVYYMLEVYLSQRNVASNQVCRSGPCHWPHR 709
>P59429:KAD_BUCBP Adenylate kinase - Buchnera aphidicola subsp. Baizongia pistaciae| Length = 215 Score = 28.1 bits (61), Expect = 9.5 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 227 ITSLRDLYITETKYKHTKYNEVH 295 I L+D YI E K+K KY+E++ Sbjct: 173 IVYLKDFYINEQKHKSLKYHEIN 195
>Q8C4P0:K1958_MOUSE Uncharacterized protein KIAA1958 homolog - Mus musculus (Mouse)| Length = 716 Score = 28.1 bits (61), Expect = 9.5 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = +2 Query: 65 VATMVITLQHLLGRTSQCSIPSSWGCKSG 151 + +++ L+HLL S ++ + WGC +G Sbjct: 25 ICSLIPNLKHLLSEGSHGNLTAMWGCSAG 53
>Q8N8K9:K1958_HUMAN Uncharacterized protein KIAA1958 - Homo sapiens (Human)| Length = 716 Score = 28.1 bits (61), Expect = 9.5 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = +2 Query: 65 VATMVITLQHLLGRTSQCSIPSSWGCKSG 151 + +++ L+HLL S ++ + WGC +G Sbjct: 25 ICSLIPNLKHLLSEGSHGNLTAMWGCSAG 53
>Q3B7M6:NEDD1_BOVIN Protein NEDD1 - Bos taurus (Bovine)| Length = 659 Score = 28.1 bits (61), Expect = 9.6 Identities = 12/47 (25%), Positives = 25/47 (53%) Frame = -3 Query: 284 CTLCACTLSQLYTNHEVKLSSKQEPLGHGTGRRGKRMKHNVTRSSLI 144 C + + +LS H V + P GHG+ + + +K+++ + SL+ Sbjct: 132 CYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSIRHLKYSLFKKSLL 178 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 65,351,593 Number of extensions: 1479408 Number of successful extensions: 3498 Number of sequences better than 10.0: 15 Number of HSP's gapped: 3498 Number of HSP's successfully gapped: 15 Length of query: 117 Length of database: 100,686,439 Length adjustment: 85 Effective length of query: 32 Effective length of database: 77,371,364 Effective search space: 2475883648 Effective search space used: 2475883648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
