>LOC_Os09g28910:12009.t02569:unspliced-genomic carbonic anhydrase, chloroplast precursor, putative, expressed|
Length = 4761
Score = 153 bits (329), Expect(8) = e-113
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = +1 / +2
Query: 919 KESINSSLLNLLTYPWIEERVKEGNLNLHGGYYNFIDCTFEKWTLVYRPGLEGGSKYAIK 1098
+ESINSSLLNLLTYPWIE+RV EG L+LHGGYYNFIDCTFEKW LVYR GLEGGSKYAIK
Sbjct: 3920 QESINSSLLNLLTYPWIEKRVNEGTLSLHGGYYNFIDCTFEKWKLVYRQGLEGGSKYAIK 4099
Query: 1099 NRSTWA*SMNKHYL 1140
NR+TW+*S YL
Sbjct: 4100 NRTTWS*SRGIAYL 4141
Score = 95.9 bits (203), Expect(8) = e-113
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = +1 / +1
Query: 352 FSCTTKASTDHSGLTRQLLDFQHDTVDETDGGYDPFNQLKERFTDFKQRNYV 507
F CTT AS DHSGLTRQLLDFQH TVDE DG +DPF +LK RF DFK RN V
Sbjct: 1984 FPCTTMASRDHSGLTRQLLDFQHGTVDEIDGEHDPFMELKARFMDFKHRNCV 2139
Score = 87.7 bits (185), Expect(8) = e-113
Identities = 32/39 (82%), Positives = 38/39 (97%)
Frame = +1 / +3
Query: 553 EFMVVACADSRVCPTSILGLQPGDAFTVRNVANLVPPYE 669
+FMVVACADSRVCP+S+LG QPG+AFTVRN+ANLVPPY+
Sbjct: 2349 QFMVVACADSRVCPSSVLGFQPGEAFTVRNIANLVPPYQ 2465
Score = 76.2 bits (160), Expect(8) = e-113
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +1 / +2
Query: 817 TFIRDWVSLGKSARLSTEAAAGNLSFESQCRHCEK 921
+FIRDWVS+ KSARLSTEAAAGNL+FE QC+HCEK
Sbjct: 2906 SFIRDWVSIAKSARLSTEAAAGNLNFELQCKHCEK 3010
Score = 45.5 bits (93), Expect(8) = e-113
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 718 LQVPNVLVVGHSRCGGIQAL 777
+QV NVLVVGHSRCGGIQAL
Sbjct: 2723 IQVENVLVVGHSRCGGIQAL 2782
Score = 40.9 bits (83), Expect(8) = e-113
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1 / +3
Query: 667 EHGASETTAALEFAVNTLQ 723
+HGASET+AALEFAVNTL+
Sbjct: 2550 QHGASETSAALEFAVNTLE 2606
Score = 38.2 bits (77), Expect(8) = e-113
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +2 / +3
Query: 98 GVQLGGHFRPEPASVLCSRGPCDQQLAAWLPP 193
G G F VL S GPCDQQL AWL P
Sbjct: 252 GAGEGAPFLAGACCVLWSPGPCDQQLGAWLLP 347
Score = 30.4 bits (60), Expect(8) = e-113
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 502 YVENFTNYKKLAEQQTPE 555
Y +N +NY+ LA+QQTP+
Sbjct: 2209 YRDNISNYQNLAQQQTPK 2262
Score = 135 bits (290), Expect(8) = 8e-97
Identities = 60/79 (75%), Positives = 66/79 (83%)
Frame = -2 / -1
Query: 1139 K*CLFIDQAQVDLFFMAYLLPPSSPGRYTNVHFSNVQSIKL*YPP*RFKFPSFTLSSIQG 960
+* + +DQ QV LFFMAYLLPPS+P RYTN HFSNVQSIKL* PP*R K PSFTL SIQG
Sbjct: 4140 R*AMPLDQDQVVLFFMAYLLPPSNPWRYTNFHFSNVQSIKL**PP*RLKVPSFTLFSIQG 3961
Query: 959 YVNKFNSELLIDSFSQCLH 903
YVNKFNSELLIDS ++ H
Sbjct: 3960 YVNKFNSELLIDSCNKIFH 3904
Score = 85.8 bits (181), Expect(8) = 8e-97
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = -2 / -2
Query: 506 T*FRCLKSVNLSFS*LNGSYPPSVSSTVSC*KSRSCRVKPE*SVEAFVVHEK 351
T F CLKS+NL+F+ +NGS PS+SSTV C*KS+SCRVKPE*S+EA VVH K
Sbjct: 2138 TQFLCLKSMNLAFNSMNGSCSPSISSTVPC*KSKSCRVKPE*SLEAIVVHGK 1983
Score = 74.4 bits (156), Expect(8) = 8e-97
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -2 / -3
Query: 665 YGGTKFATLRTVNASPG*SPKILVGQTLESAQATTMN 555
YGGTKFA LRTVNASPG*+PK L G TLESAQATTMN
Sbjct: 2461 YGGTKFAILRTVNASPG*NPKTLEGHTLESAQATTMN 2351
Score = 73.0 bits (153), Expect(8) = 8e-97
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2 / -1
Query: 923 SFSQCLHCDSKLKFPAAASVLNLALFPSETQSLIKVL 813
+FSQCLHC+SK KFPAAASVLNLALF +TQSLIK+L
Sbjct: 3012 TFSQCLHCNSKFKFPAAASVLNLALFAIDTQSLIKLL 2902
Score = 50.6 bits (104), Expect(8) = 8e-97
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 815 LELRSSFLLFMLISACMPPQRL*PTTKTFGT* 720
L+ SS LLF+LISA +PPQRL*PTT TF T*
Sbjct: 2820 LDCESSCLLFILISAWIPPQRL*PTTNTFST* 2725
Score = 38.2 bits (77), Expect(8) = 8e-97
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / -3
Query: 719 SVLTANSSAAVVSEAPC 669
SVLTANSSAA+VSEAPC
Sbjct: 2602 SVLTANSSAALVSEAPC 2552
Score = 28.1 bits (55), Expect(8) = 8e-97
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 555 LWCLLLSKFFIIGKIFHV 502
LWCLLLSK I+ I +
Sbjct: 2262 LWCLLLSKILIVRNIIPI 2209
Score = 25.4 bits (49), Expect(8) = 8e-97
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -2
Query: 138 EAGSGRKWPPSWTPGAAW 85
E+GSG + P W P AW
Sbjct: 716 ESGSGCRGPMCWGPLEAW 663
Score = 119 bits (255), Expect(7) = 3e-75
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = -3 / -2
Query: 1123 LIKPR*TCSLWHTYCHLPALDGTLMSTSQMCNQ*NCSIPHEGSNFLPSPFPLSKGMLISS 944
LIK R*+ SLWHT HLP L G L+STS+MCNQ*NC+ PHEGS FL SPF LSKGML SS
Sbjct: 4124 LIKTR*SYSLWHTCFHLPTLGGILISTSRMCNQ*NCNSPHEGSKFLHSPFSLSKGMLTSS 3945
Query: 943 TASY*LIPFHSVCIAIR 893
T SY*LIP I +R
Sbjct: 3944 TVSY*LIPATKYFIHVR 3894
Score = 73.9 bits (155), Expect(7) = 3e-75
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1 / -2
Query: 669 LVWWYQICHITDSECITRLKP*NTGRADPGVSTSNHHEL 553
L+WWYQIC+ITDS+C LKP NT R P +STSNHHEL
Sbjct: 2465 LIWWYQICYITDSKCFPGLKPQNT*RTYPRISTSNHHEL 2349
Score = 73.9 bits (155), Expect(7) = 3e-75
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = -3 / -3
Query: 502 SSVA*SP*TSLLVD*MDHILHLSHLQYHVENLEVVGSNQNDLSKPL*YMRNRS 344
+S A*SP*T L *MDH+ HLSHL YHVENL+ V SNQNDL +PL Y + S
Sbjct: 2134 NSCA*SP*TLLSTP*MDHVPHLSHLLYHVENLKAVESNQNDLLRPLWYTESPS 1976
Score = 51.5 bits (106), Expect(7) = 3e-75
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -1 / -3
Query: 921 LFTVSALRFEAQISSCCFCA*SCTLPK*DPVSDKGS 814
LFT+ AL F+ QISSCCF * CTL * P+SDK S
Sbjct: 3010 LFTMFAL*FKIQISSCCFRT*PCTLCN*HPISDKAS 2903
Score = 45.5 bits (93), Expect(7) = 3e-75
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -1 / -3
Query: 813 RASIVFLTLHAH*CLYATTTTMTYH*NVWYL 721
R I+ LT H H*CL TTT +TYH* + YL
Sbjct: 2818 RLRIILLTFHTH*CLDTTTTAVTYH*YILYL 2726
Score = 29.0 bits (57), Expect(7) = 3e-75
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3 / -1
Query: 736 KRLVPEVC*QQTLVLQ*SLKLHARMV 659
K +P VC*Q+T V +*SLK HA ++
Sbjct: 2619 KIFLPLVC*QRTPVQR*SLKHHAGII 2542
Score = 24.4 bits (47), Expect(7) = 3e-75
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3 / -2
Query: 208 RLLRVWRQPSGELLIARTTGA*N 140
R+ R +QPS ELLIAR *N
Sbjct: 362 RVRRRRQQPSAELLIARAR*P*N 294
Score = 118 bits (253), Expect(7) = 5e-71
Identities = 51/67 (76%), Positives = 56/67 (83%)
Frame = +3 / +1
Query: 921 GIN**LAVELINIPLDRGKGEGRKFEPSWGILQFY*LHI*EVDISVPSRAGRWQ*VCHKE 1100
GIN**L VEL+NIPLDR KGE R FEPSWG+LQFY*LHI EV+IS+P R GRW+ VCHKE
Sbjct: 3922 GIN**LTVELVNIPLDREKGE*RNFEPSWGLLQFY*LHIREVEISIPPRVGRWKQVCHKE 4101
Query: 1101 QVYLGLI 1121
YL LI
Sbjct: 4102 *DYLVLI 4122
Score = 68.4 bits (143), Expect(7) = 5e-71
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = +3 / +3
Query: 345 ERFLMYYKGFDRSFWFDPTTSRFST*YCR*DRWRI*SIQSTKREVHGL*ATEL 503
E +Y+ G RSFWFD T RFST Y R*DRW *SI + +VHGL A EL
Sbjct: 1977 EGLSVYHNGLKRSFWFDSTAFRFSTWYSR*DRWGT*SIHGVESKVHGLQAQEL 2135
Score = 59.7 bits (124), Expect(7) = 5e-71
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3 / +1
Query: 819 LYQRLGLTWEECKIKHRSSSWKFELRIAMQTL*KG 923
LYQRLG+ +ECK+K+ SSSWKFE I +QTL*KG
Sbjct: 2908 LYQRLGVNCKECKVKYGSSSWKFEF*ITVQTL*KG 3012
Score = 58.8 bits (122), Expect(7) = 5e-71
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 554 SSWWLLVLTPGSALPVF*GFSLVMHSLSVMWQIWYHH 664
SSWWLLVL G L VF GFS H LSV+ QIWYHH
Sbjct: 2350 SSWWLLVLILGYVLQVFWGFSPGKHLLSVI*QIWYHH 2460
Score = 40.0 bits (81), Expect(7) = 5e-71
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 720 SGTKRFSGRS*SLWWHTSTNEHEE*ER 800
SG + SGRS LWW+ STNE+E+* R
Sbjct: 2725 SGRECISGRSQPLWWYPSTNEYEK*AR 2805
Score = 29.9 bits (59), Expect(7) = 5e-71
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 669 AWSFRDYCSTRVCCQHTSG 725
AW FRD T V CQHT G
Sbjct: 2552 AWCFRD*RCTGVRCQHTRG 2608
Score = 28.1 bits (55), Expect(7) = 5e-71
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +1
Query: 141 FYAPVVLAISSSPLGCRHTR 200
FY + LAISSS LGC R
Sbjct: 295 FYGHLALAISSSALGCCRRR 354
Score = 119 bits (255), Expect(5) = 4e-54
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = -1 / -3
Query: 1122 *SSPGRPVLYGILTATFQPWTVH*CPLLKCAINKIVVSPMKVQISFLHPFLYPRVC**VQ 943
*S PG P+LYGIL +TFQP V+* PLL+CAINKIV++PMK Q SF+HPFLYPRVC* VQ
Sbjct: 4123 *SRPGSPILYGILASTFQPLAVY*FPLLECAINKIVIAPMKAQSSFIHPFLYPRVC*QVQ 3944
Query: 942 QRAIN*FL 919
Q AIN*FL
Sbjct: 3943 Q*AIN*FL 3920
Score = 70.3 bits (147), Expect(5) = 4e-54
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -1 / -1
Query: 507 HVVPLLKVREPLF*LIEWIISSICLIYSIMLKI*KLSGQTRMICRSLCST*EIAPA 340
H +P+L+V EP F L EWI+ I LIY MLKI*KLS QTRMI C T ++ PA
Sbjct: 2139 HTIPVLEVHEPCFQLHEWIMFPIYLIYCTMLKI*KLSSQTRMIS*GHCGTRKVPPA 1972
Score = 48.3 bits (99), Expect(5) = 4e-54
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 664 MVVPNLPHYGQ*MHHQAEALKYW*GRPWSQHKQPP*T 554
MVVPNL +YGQ*M +AE K+ P +QHKQPP*T
Sbjct: 2460 MVVPNLLYYGQ*MLPRAETPKHLKDIP*NQHKQPP*T 2350
Score = 42.8 bits (87), Expect(5) = 4e-54
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -3 / -2
Query: 922 PFHSVCIAIRSSNFQXXXXXXXLHSSQVRPSL**RF 815
PFH+VC I++SNFQ LHS Q+ P+L** F
Sbjct: 3011 PFHNVCTVIQNSNFQLLLPYLTLHSLQLTPNL**SF 2904
Score = 24.9 bits (48), Expect(5) = 4e-54
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 763 HHNDYDLPLKRLVPE 719
HHN DLPL +PE
Sbjct: 2768 HHNGCDLPLIHSLPE 2724
Score = 115 bits (245), Expect(4) = 2e-49
Identities = 53/68 (77%), Positives = 56/68 (82%)
Frame = +2 / +3
Query: 920 RNQLIARC*TY*HTLG*RKG*RKEI*TFMGDTTILLIAHLRSGH*CTVQGWKVAVSMP*R 1099
RNQLIA C*T *HTLG*RKG* KE+* FMG TILLIAH RSG+* T +GWKV SMP*R
Sbjct: 3921 RNQLIAHC*TC*HTLG*RKG*MKEL*AFMGAITILLIAHSRSGN*YTAKGWKVEASMP*R 4100
Query: 1100 TGLPGLDQ 1123
GLPGLDQ
Sbjct: 4101 IGLPGLDQ 4124
Score = 57.9 bits (120), Expect(4) = 2e-49
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = +2 / +2
Query: 314 CGRTIAVDLAGAISHVLQRLRQIILV*PDNF*IFNMIL*MRQMEDMIHSIN*KRGSRTLS 493
C + AG V Q ++IILV* D+F*IFNM+ *MR M +MIHS +*K+GS T S
Sbjct: 1946 CTSKMNFSSAGGTFRVPQWPQEIILV*LDSF*IFNMVQ*MR*MGNMIHSWS*KQGSWTSS 2125
Query: 494 NGTTWK 511
G K
Sbjct: 2126 TGIVCK 2143
Score = 53.3 bits (110), Expect(4) = 2e-49
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3 / +2
Query: 555 VHGGCLC*LQGLPYQYFRASAW*CIHCP*CGKFGTTIRAWSFRD 686
VHGGCLC* G+ ++ F SA I+CP* KFGTTI S D
Sbjct: 2351 VHGGCLC*F*GMSFKCFGVSARGSIYCP*YSKFGTTISGSSSLD 2482
Score = 42.8 bits (87), Expect(4) = 2e-49
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 815 EPLSETGSHLGRVQD*AQKQQLEI*ASNRNADTVKR 922
E LSE G L RVQ * +KQQLEI* N +A+ VKR
Sbjct: 2904 EALSEIGCQLQRVQG*VRKQQLEI*ILNYSANIVKR 3011
>LOC_Os01g45274:12001.t03984:unspliced-genomic carbonic anhydrase, chloroplast precursor, putative, expressed|
Length = 12374
Score = 72.1 bits (151), Expect(4) = 6e-28
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +1 / +1
Query: 553 EFMVVACADSRVCPTSILGLQPGDAFTVRNVANLVPPY 666
++MV +CADSRVCP+ +GL+PG+AFTVRN+AN+VP Y
Sbjct: 10639 QYMVFSCADSRVCPSVTMGLEPGEAFTVRNIANMVPAY 10752
Score = 54.2 bits (112), Expect(4) = 6e-28
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1 / +2
Query: 919 KESINSSLLNLLTYPWIEERVKEGNLNLHGGYYNFIDCTFEKWTLVYRPGL 1071
+E++N SL NL TYP+++E + G L L GG+Y+F+ + W RP +
Sbjct: 11927 QEAVNQSLENLKTYPFVKEGIANGTLKLVGGHYDFVSGNLDLWEP*IRPSV 12079
Score = 40.9 bits (83), Expect(4) = 6e-28
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / +1
Query: 712 NTLQVPNVLVVGHSRCGGIQAL 777
N LQV ++V+GHSRCGGI+AL
Sbjct: 11377 NNLQVELIVVIGHSRCGGIKAL 11442
Score = 32.2 bits (64), Expect(4) = 6e-28
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1 / +1
Query: 820 FIRDWVSLGKSARLSTEAAAGNLSFESQCRHCEK 921
F+ DWV G A+ + +L F+ QC EK
Sbjct: 11638 FVEDWVRTGFPAKKKVQTEHASLPFDDQCAILEK 11739
Score = 40.9 bits (83), Expect = 0.022
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 659 GTKFATLRTVNASPG*SPKILVGQTLESAQATTM 558
GT A LRTV ASPG P + G T ESA TM
Sbjct: 10745 GTMLAMLRTVKASPGSRPMVTDGHTRESAHENTM 10644
>LOC_Os03g14700:12003.t01257:unspliced-genomic lipid binding protein, putative|
Length = 4816
Score = 32.2 bits (64), Expect = 9.0
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -1 / -2
Query: 1395 LIVTMIHQHYTDVTVQALPNVAALYIVS 1312
LI+T+++Q YT+ T +PN+ L+ +S
Sbjct: 2235 LIITILYQQYTNSTKHRIPNMNILHCIS 2152
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 557,861,540
Number of extensions: 8866810
Number of successful extensions: 36964
Number of sequences better than 10.0: 31
Length of query: 480
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 429
Effective length of database: 52,743,708
Effective search space: 22627050732
Effective search space used: 22627050732
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)