ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf60f01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009563.1| Triticum aestivum clone wre1n.pk0006.h12:fis, full insert mRNA sequence Length = 577 Score = 149 bits (75), Expect = 3e-32 Identities = 222/271 (81%) Strand = Plus / Plus Query: 636 gcatgttctgcgaggggttctcgccctacggccccttctgggaccactgcctggagtact 695 ||||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 17 gcatgttctgccaggggttctcgccctatggccccttctgggatcactgccttgagtact 76 Query: 696 gggaggagagcgtggcgaggccggacgccgtcctcttcctcaggtacgaggagatcaagt 755 || |||||||||||| ||||||||| || || ||||| | ||| || |||||||||| Sbjct: 77 ggagggagagcgtggcaaggccggacaatgttcttttcctaaagtatgaagagatcaagt 136 Query: 756 cggacccggcgcgggtggtgaggaggctcgcggggttcctcggcgtgccgctgagcgagg 815 | || |||| || | |||||||| ||| ||| |||||||| || ||||||| | ||| Sbjct: 137 ccgatccggtgcatgcggtgaggaagctggcgaaattcctcggtgtcccgctgaccaagg 196 Query: 816 aggaggagcgctccggcgtggccgaggaggtggcgaggatgtgcagcttcgagacgctca 875 | |||||| ||||||| || || ||||||||| | | |||||||||| |||| ||| | Sbjct: 197 atgaggagagctccggtgttgctcaggaggtggtgcgactgtgcagctttgagatgctta 256 Query: 876 ccgggctggaggtgaaccaggtcggcggcgt 906 || | ||| ||||||| ||||||||||||| Sbjct: 257 ccagcctgcaggtgaattaggtcggcggcgt 287 Score = 50.1 bits (25), Expect = 0.018 Identities = 75/92 (81%) Strand = Plus / Plus Query: 941 gtgttctacaggaaaggcgaggtcggggactgggccaaccacatgagccgcgagatggcg 1000 ||||| ||||| ||||| || || |||||||||| ||||| ||||||| ||||||| | Sbjct: 322 gtgttttacagaaaaggagaagtangggactgggcaaaccatatgagccaggagatgggg 381 Query: 1001 gacaagctcgaccgcatcgtccaggacaagct 1032 || || | |||||||||||||| ||||||| Sbjct: 382 gaggagttggaccgcatcgtccaacacaagct 413
>ref|NM_001068768.1| Oryza sativa (japonica cultivar-group) Os08g0515100 (Os08g0515100) mRNA, complete cds Length = 972 Score = 107 bits (54), Expect = 9e-20 Identities = 140/168 (83%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 249 cgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctca 308 |||| ||| ||||||||||| |||||||||| | || |||||||||||||||||||||| Sbjct: 197 cgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctca 256 Query: 309 aggccctcgccttcaccgtcgccacccggtcccgcca---cggcctcggcgccgccgacc 365 |||| ||| ||||| | |||||| ||| |||||||| || | |||||||| ||||| Sbjct: 257 aggcgctctccttcgacatcgccaaccgctcccgccaccccgtcgccggcgccggcgacc 316 Query: 366 acccgctcctcacccgccacccgcagcacctggtgcccttcatcgaga 413 ||||||| ||||| |||||||||| |||| ||||| |||||||||| Sbjct: 317 acccgctgctcacgacccacccgcaggacctcgtgccgttcatcgaga 364
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 107 bits (54), Expect = 9e-20 Identities = 140/168 (83%), Gaps = 3/168 (1%) Strand = Plus / Minus Query: 249 cgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctca 308 |||| ||| ||||||||||| |||||||||| | || |||||||||||||||||||||| Sbjct: 25560380 cgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctca 25560321 Query: 309 aggccctcgccttcaccgtcgccacccggtcccgcca---cggcctcggcgccgccgacc 365 |||| ||| ||||| | |||||| ||| |||||||| || | |||||||| ||||| Sbjct: 25560320 aggcgctctccttcgacatcgccaaccgctcccgccaccccgtcgccggcgccggcgacc 25560261 Query: 366 acccgctcctcacccgccacccgcagcacctggtgcccttcatcgaga 413 ||||||| ||||| |||||||||| |||| ||||| |||||||||| Sbjct: 25560260 acccgctgctcacgacccacccgcaggacctcgtgccgttcatcgaga 25560213 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 254 cgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggcc 313 |||| |||||||||| |||||||||| | || |||||||||||||||||||||||||| Sbjct: 25558007 cgcgacgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcg 25557948 Query: 314 ctcgccttcaccgtcgcca 332 ||| ||||| || |||||| Sbjct: 25557947 ctctccttcgccatcgcca 25557929 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 258 ccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcg 317 ||||||| ||| |||||||||| | || ||||||||||||||||||||||||| ||| Sbjct: 25528319 ccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctct 25528260 Query: 318 ccttcaccgtcgcca 332 ||||| || |||||| Sbjct: 25528259 ccttcgccatcgcca 25528245 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||||| |||| ||||||||||||||| Sbjct: 25557436 ccggcgtcgtcgaggaggtggtgaggctgtgcagcttcgaga 25557395 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Minus Query: 262 cgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgc 318 |||||| || ||||| |||| ||||||| ||| ||||| ||||||||||||||||| Sbjct: 10720133 cgacgtcgtgctcgcgacgctgcccaaggccgggaccacgtggctcaaggccctcgc 10720077 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgcagc 392 ||||||||||||||||||||||| Sbjct: 1618341 gctcctcacccgccacccgcagc 1618319 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 932 gagaactcggtgttctacaggaaaggcgaggtcggggactgg 973 |||||||||||||| | ||| ||||| || |||||||||||| Sbjct: 25527648 gagaactcggtgtttttcagaaaaggtgaagtcggggactgg 25527607 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||| | |||| ||||||||||||||| Sbjct: 25527752 ccggcgtcgtcgaggaggttgtgaggctgtgcagcttcgaga 25527711 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgca 390 ||||||||||||||||||||| Sbjct: 1618394 gctcctcacccgccacccgca 1618374
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 107 bits (54), Expect = 9e-20 Identities = 140/168 (83%), Gaps = 3/168 (1%) Strand = Plus / Minus Query: 249 cgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctca 308 |||| ||| ||||||||||| |||||||||| | || |||||||||||||||||||||| Sbjct: 47071 cgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctca 47012 Query: 309 aggccctcgccttcaccgtcgccacccggtcccgcca---cggcctcggcgccgccgacc 365 |||| ||| ||||| | |||||| ||| |||||||| || | |||||||| ||||| Sbjct: 47011 aggcgctctccttcgacatcgccaaccgctcccgccaccccgtcgccggcgccggcgacc 46952 Query: 366 acccgctcctcacccgccacccgcagcacctggtgcccttcatcgaga 413 ||||||| ||||| |||||||||| |||| ||||| |||||||||| Sbjct: 46951 acccgctgctcacgacccacccgcaggacctcgtgccgttcatcgaga 46904 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 254 cgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggcc 313 |||| |||||||||| |||||||||| | || |||||||||||||||||||||||||| Sbjct: 44698 cgcgacgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcg 44639 Query: 314 ctcgccttcaccgtcgcca 332 ||| ||||| || |||||| Sbjct: 44638 ctctccttcgccatcgcca 44620 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 258 ccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcg 317 ||||||| ||| |||||||||| | || ||||||||||||||||||||||||| ||| Sbjct: 15010 ccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctct 14951 Query: 318 ccttcaccgtcgcca 332 ||||| || |||||| Sbjct: 14950 ccttcgccatcgcca 14936 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||||| |||| ||||||||||||||| Sbjct: 44127 ccggcgtcgtcgaggaggtggtgaggctgtgcagcttcgaga 44086 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 932 gagaactcggtgttctacaggaaaggcgaggtcggggactgg 973 |||||||||||||| | ||| ||||| || |||||||||||| Sbjct: 14339 gagaactcggtgtttttcagaaaaggtgaagtcggggactgg 14298 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||| | |||| ||||||||||||||| Sbjct: 14443 ccggcgtcgtcgaggaggttgtgaggctgtgcagcttcgaga 14402
>ref|NM_001066762.1| Oryza sativa (japonica cultivar-group) Os07g0605800 (Os07g0605800) mRNA, complete cds Length = 1362 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 244 cttcacgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctg 303 ||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 269 cttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtg 328 Query: 304 gctcaaggccctcgccttc 322 ||||||||| || |||||| Sbjct: 329 gctcaaggcgctggccttc 347
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 244 cttcacgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctg 303 ||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 24791803 cttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtg 24791862 Query: 304 gctcaaggccctcgccttc 322 ||||||||| || |||||| Sbjct: 24791863 gctcaaggcgctggccttc 24791881 Score = 71.9 bits (36), Expect = 5e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 283 gcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 2406826 gcccaagtgcggcaccacgtggctcaaggccctcgccttc 2406787 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| ||||||||||||||||||||| Sbjct: 2542868 cccaagtgcggcaccacgtggctcaaggccctcgccttc 2542830 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 283 gcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 24853003 gcccaagtgcggcaccacgtggctcaaggccctggccttc 24852964 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgc 318 ||||||||||||||||| ||||||||||||||||| Sbjct: 2550931 cccaagtgcggcaccacgtggctcaaggccctcgc 2550897
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 244 cttcacgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctg 303 ||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 26254 cttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtg 26313 Query: 304 gctcaaggccctcgccttc 322 ||||||||| || |||||| Sbjct: 26314 gctcaaggcgctggccttc 26332 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 283 gcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 87454 gcccaagtgcggcaccacgtggctcaaggccctggccttc 87415
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 244 cttcacgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctg 303 ||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| || Sbjct: 276 cttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtg 335 Query: 304 gctcaaggccctcgccttc 322 ||||||||| || |||||| Sbjct: 336 gctcaaggcgctggccttc 354
>emb|CT837574.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA030N04, full insert sequence Length = 837 Score = 81.8 bits (41), Expect = 5e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 262 cgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgcctt 321 ||||||||||||||||| | |||||||||||||||||| |||||||||||||| ||||| Sbjct: 320 cgacgtggtcctcgccagcctgcccaagtgcggcaccacgtggctcaaggccctggcctt 379 Query: 322 c 322 | Sbjct: 380 c 380
>ref|NM_001068767.1| Oryza sativa (japonica cultivar-group) Os08g0515000 (Os08g0515000) mRNA, complete cds Length = 999 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 254 cgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggcc 313 |||| |||||||||| |||||||||| | || |||||||||||||||||||||||||| Sbjct: 193 cgcgacgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcg 252 Query: 314 ctcgccttcaccgtcgcca 332 ||| ||||| || |||||| Sbjct: 253 ctctccttcgccatcgcca 271 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||||| |||| ||||||||||||||| Sbjct: 764 ccggcgtcgtcgaggaggtggtgaggctgtgcagcttcgaga 805
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Minus Query: 262 cgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgcctt 321 ||||||||||||||| | | |||||||||||||||||| |||||||||||||| ||||| Sbjct: 34455 cgacgtggtcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggcctt 34396 Query: 322 c 322 | Sbjct: 34395 c 34395
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Minus Query: 262 cgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgcctt 321 ||||||||||||||| | | |||||||||||||||||| |||||||||||||| ||||| Sbjct: 8623289 cgacgtggtcctcgcgagcctgcccaagtgcggcaccacgtggctcaaggccctggcctt 8623230 Query: 322 c 322 | Sbjct: 8623229 c 8623229 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 17345404 cccaagtccggcaccacctggctcaaggcgctcgccttc 17345442 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 17387019 cccaagtccggcaccacctggctcaaggcgctcgccttc 17387057 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| || |||||| Sbjct: 17354657 cccaagtccggcaccacctggctcaaggcgcttgccttc 17354695 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 1892664 gtggtgtacctgtgccgggatcccaagga 1892636 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 17387358 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 17387397 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 523 tgtggtgtacctgtgccgggaccccaaggac 553 |||||||||||| || ||||||||||||||| Sbjct: 1894795 tgtggtgtacctttgtcgggaccccaaggac 1894765 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 287 aagtgcggcaccacctggctcaaggccctcgcctt 321 ||||| || |||||||||||||| ||||||||||| Sbjct: 14537135 aagtgtggtaccacctggctcaaagccctcgcctt 14537101 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 17387592 gtcctcttcctccggtacgaggagat 17387617 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 1892869 cccaagtccggcaccacatggctcaaggc 1892841
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 71.9 bits (36), Expect = 5e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 283 gcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 109834 gcccaagtgcggcaccacgtggctcaaggccctcgccttc 109795
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| ||||||||||||||||||||| Sbjct: 107848 cccaagtgcggcaccacgtggctcaaggccctcgccttc 107810 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgc 318 ||||||||||||||||| ||||||||||||||||| Sbjct: 115911 cccaagtgcggcaccacgtggctcaaggccctcgc 115877
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 287 aagtgcggcaccacctggctcaaggccctcgccttcaccgtc 328 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 9822638 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 1821955 gtggtgtacctgtgccgggatcccaagga 1821927 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||||| || ||||||||||||||| Sbjct: 1830524 gtggtgtacctttgtcgggaccccaaggac 1830495 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaa 549 |||||||||||||||||||| ||||| Sbjct: 1837525 gtggtgtacctgtgccgggatcccaa 1837500 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 812 gaggaggaggagcgctccggcgtggc 837 |||||||||||| ||||||||||||| Sbjct: 21475178 gaggaggaggagggctccggcgtggc 21475153 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 1822161 cccaagtccggcaccacatggctcaaggc 1822133
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 287 aagtgcggcaccacctggctcaaggccctcgccttcaccgtc 328 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 311
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 287 aagtgcggcaccacctggctcaaggccctcgccttcaccgtc 328 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 109832
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 283 gcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 36635 gcccaagtgcggcaccacgtggctcaaggccctggccttc 36596
>ref|NM_001074482.1| Oryza sativa (japonica cultivar-group) Os11g0505200 (Os11g0505200) mRNA, complete cds Length = 1222 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 978 cccaagtccggcaccacctggctcaaggcgctcgccttc 940 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Minus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 639 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 600 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 405 gtcctcttcctccggtacgaggagat 380
>ref|NM_001074481.1| Oryza sativa (japonica cultivar-group) Os11g0505300 (Os11g0505300) mRNA, complete cds Length = 1131 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 214 cccaagtccggcaccacctggctcaaggcgctcgccttc 252 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 553 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 592 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 787 gtcctcttcctccggtacgaggagat 812
>ref|NM_001074479.1| Oryza sativa (japonica cultivar-group) Os11g0503900 (Os11g0503900) mRNA, complete cds Length = 1225 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 270 cccaagtccggcaccacctggctcaaggcgctcgccttc 308
>ref|NM_001070809.1| Oryza sativa (japonica cultivar-group) Os10g0190100 (Os10g0190100) mRNA, complete cds Length = 1232 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 302 cccaagtgcggcaccacgtggctcaaggccctggccttc 340
>ref|NM_001065428.1| Oryza sativa (japonica cultivar-group) Os07g0148600 (Os07g0148600) mRNA, complete cds Length = 1062 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgc 318 ||||||||||||||||| ||||||||||||||||| Sbjct: 265 cccaagtgcggcaccacgtggctcaaggccctcgc 299
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 19417 cccaagtgcggcaccacgtggctcaaggccctggccttc 19455
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 74335 cccaagtccggcaccacctggctcaaggcgctcgccttc 74373 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 115801 cccaagtccggcaccacctggctcaaggcgctcgccttc 115839 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| || |||||| Sbjct: 83588 cccaagtccggcaccacctggctcaaggcgcttgccttc 83626 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 116140 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 116179 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 116374 gtcctcttcctccggtacgaggagat 116399
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 100328 cccaagtccggcaccacctggctcaaggcgctcgccttc 100366 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 141794 cccaagtccggcaccacctggctcaaggcgctcgccttc 141832 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| || |||||| Sbjct: 109581 cccaagtccggcaccacctggctcaaggcgcttgccttc 109619 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 142133 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 142172 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 142367 gtcctcttcctccggtacgaggagat 142392
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 5904466 cccaagtgcggcaccacgtggctcaaggccctggccttc 5904428
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 258 ccgacgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcg 317 ||||||| ||| |||||||||| | || ||||||||||||||||||||||||| ||| Sbjct: 159635 ccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtgctct 159576 Query: 318 ccttcaccgtcgcca 332 ||||| || |||||| Sbjct: 159575 ccttcgccatcgcca 159561 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 932 gagaactcggtgttctacaggaaaggcgaggtcggggactgg 973 |||||||||||||| | ||| ||||| || |||||||||||| Sbjct: 158964 gagaactcggtgtttttcagaaaaggtgaagtcggggactgg 158923 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 828 ccggcgtggccgaggaggtggcgaggatgtgcagcttcgaga 869 ||||||| | ||||||||| | |||| ||||||||||||||| Sbjct: 159068 ccggcgtcgtcgaggaggttgtgaggctgtgcagcttcgaga 159027
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||||||||||||| |||||||||||||| |||||| Sbjct: 313 cccaagtgcggcaccacgtggctcaaggccctggccttc 351
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 270 cccaagtccggcaccacctggctcaaggcgctcgccttc 308
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 245 cccaagtccggcaccacctggctcaaggcgctcgccttc 283 Score = 48.1 bits (24), Expect = 0.071 Identities = 36/40 (90%) Strand = Plus / Plus Query: 527 gtgtacctgtgccgggaccccaaggacacgctcgtctcca 566 |||||| | |||||||||||||||||| || ||||||||| Sbjct: 584 gtgtacgtctgccgggaccccaaggacgcgttcgtctcca 623 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 |||||||||||| ||||||||||||| Sbjct: 818 gtcctcttcctccggtacgaggagat 843
>emb|CT835891.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN018F08, full insert sequence Length = 1428 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| |||||||| |||||||||||| ||||||||| Sbjct: 360 cccaagtccggcaccagctggctcaaggcgctcgccttc 398 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 540 gggaccccaaggacacgctcgtctcc 565 ||||||||||||||||||| |||||| Sbjct: 649 gggaccccaaggacacgctggtctcc 674
>ref|NM_001070423.1| Oryza sativa (japonica cultivar-group) Os09g0555100 (Os09g0555100) mRNA, complete cds Length = 2052 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| |||||||| |||||||||||| ||||||||| Sbjct: 1177 cccaagtccggcaccagctggctcaaggcgctcgccttc 1215 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 540 gggaccccaaggacacgctcgtctcc 565 ||||||||||||||||||| |||||| Sbjct: 1466 gggaccccaaggacacgctggtctcc 1491
>ref|NM_001064653.1| Oryza sativa (japonica cultivar-group) Os06g0626600 (Os06g0626600) mRNA, complete cds Length = 1274 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 728 ctcttcctcaggtacgaggagatcaagtcggacccggcg 766 ||||||||||||||||||||||| ||| |||||||||| Sbjct: 777 ctcttcctcaggtacgaggagatgaagcgggacccggcg 815
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| |||||||| |||||||||||| ||||||||| Sbjct: 58722 cccaagtccggcaccagctggctcaaggcgctcgccttc 58760 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 540 gggaccccaaggacacgctcgtctcc 565 ||||||||||||||||||| |||||| Sbjct: 59011 gggaccccaaggacacgctggtctcc 59036
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggccctcgccttc 322 ||||||| |||||||| |||||||||||| ||||||||| Sbjct: 21712702 cccaagtccggcaccagctggctcaaggcgctcgccttc 21712740 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 540 gggaccccaaggacacgctcgtctcc 565 ||||||||||||||||||| |||||| Sbjct: 21712991 gggaccccaaggacacgctggtctcc 21713016
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 728 ctcttcctcaggtacgaggagatcaagtcggacccggcg 766 ||||||||||||||||||||||| ||| |||||||||| Sbjct: 24908905 ctcttcctcaggtacgaggagatgaagcgggacccggcg 24908867 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctca 308 ||||||||||||||||| ||||||| Sbjct: 7945102 cccaagtgcggcaccacgtggctca 7945126
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 728 ctcttcctcaggtacgaggagatcaagtcggacccggcg 766 ||||||||||||||||||||||| ||| |||||||||| Sbjct: 3460 ctcttcctcaggtacgaggagatgaagcgggacccggcg 3422
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 728 ctcttcctcaggtacgaggagatcaagtcggacccggcg 766 ||||||||||||||||||||||| ||| |||||||||| Sbjct: 119988 ctcttcctcaggtacgaggagatgaagcgggacccggcg 119950
>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full insert sequence Length = 1274 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 728 ctcttcctcaggtacgaggagatcaagtcggacccggcg 766 ||||||||||||||||||||||| ||| |||||||||| Sbjct: 777 ctcttcctcaggtacgaggagatgaagcgggacccggcg 815
>ref|NM_001072642.1| Oryza sativa (japonica cultivar-group) Os12g0137600 (Os12g0137600) mRNA, complete cds Length = 732 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 190 gtggtgtacctgtgccgggatcccaagga 218
>ref|NM_001049398.1| Oryza sativa (japonica cultivar-group) Os01g0311600 (Os01g0311600) mRNA, complete cds Length = 1407 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 310 cccaagtgtggcaccacctggctcaaggc 338 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 574 gtggtgtacatgtgccgcgaccccaaggac 603
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 24320 gtggtgtacctgtgccgggatcccaagga 24292 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 523 tgtggtgtacctgtgccgggaccccaaggac 553 |||||||||||| || ||||||||||||||| Sbjct: 26451 tgtggtgtacctttgtcgggaccccaaggac 26421 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 24525 cccaagtccggcaccacatggctcaaggc 24497
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 110494 gtggtgtacctgtgccgggatcccaagga 110466 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 523 tgtggtgtacctgtgccgggaccccaaggac 553 |||||||||||| || ||||||||||||||| Sbjct: 112625 tgtggtgtacctttgtcgggaccccaaggac 112595 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 110699 cccaagtccggcaccacatggctcaaggc 110671
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 11687223 cccaagtgtggcaccacctggctcaaggc 11687195 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 11686959 gtggtgtacatgtgccgcgaccccaaggac 11686930 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/45 (88%), Gaps = 2/45 (4%) Strand = Plus / Minus Query: 810 gcgaggaggaggagcg--ctccggcgtggccgaggaggtggcgag 852 |||||||||||||||| | |||||| || ||||||||||||||| Sbjct: 12708058 gcgaggaggaggagcggacgccggcggggtcgaggaggtggcgag 12708014
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 251 cccaagtgtggcaccacctggctcaaggc 279 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 515 gtggtgtacatgtgccgcgaccccaaggac 544
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 126347 cccaagtgtggcaccacctggctcaaggc 126319 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 126083 gtggtgtacatgtgccgcgaccccaaggac 126054
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 26391 cccaagtgtggcaccacctggctcaaggc 26363 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 26127 gtggtgtacatgtgccgcgaccccaaggac 26098
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Minus Query: 262 cgacgtggtcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgc 318 |||||| || ||||| |||| ||||||| ||| ||||| ||||||||||||||||| Sbjct: 17265 cgacgtcgtgctcgcgacgctgcccaaggccgggaccacgtggctcaaggccctcgc 17209
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 |||||||| |||||||||||||||||||| Sbjct: 310 cccaagtgtggcaccacctggctcaaggc 338 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||| ||||||| |||||||||||| Sbjct: 574 gtggtgtacatgtgccgcgaccccaaggac 603
>gb|AY108956.1| Zea mays PCO130274 mRNA sequence Length = 631 Score = 50.1 bits (25), Expect = 0.018 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 ccggctgccgtgtggtgtacctgtgccgggaccccaaggac 553 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 578 ccggctgccgcgtcgtgtacctgtgccggcagcccaaggac 618
>gb|AY106554.1| Zea mays PCO133039 mRNA sequence Length = 474 Score = 50.1 bits (25), Expect = 0.018 Identities = 49/57 (85%) Strand = Plus / Plus Query: 244 cttcacgccccgcgccgacgacgtggtcctcgccacgcagcccaagtgcggcaccac 300 ||||||||| ||| ||||||||||| ||||||| | | ||||||||||||||||| Sbjct: 270 cttcacgccgcgccccgacgacgtgatcctcgcgagctaccccaagtgcggcaccac 326
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 16673 gtggtgtacctgtgccgggatcccaagga 16645 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||||| || ||||||||||||||| Sbjct: 25242 gtggtgtacctttgtcgggaccccaaggac 25213 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 524 gtggtgtacctgtgccgggaccccaa 549 |||||||||||||||||||| ||||| Sbjct: 32243 gtggtgtacctgtgccgggatcccaa 32218 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 16879 cccaagtccggcaccacatggctcaaggc 16851
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaagga 552 |||||||||||||||||||| |||||||| Sbjct: 18527 gtggtgtacctgtgccgggatcccaagga 18555 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaa 549 |||||||||||||||||||| ||||| Sbjct: 2957 gtggtgtacctgtgccgggatcccaa 2982 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||||| || ||||||||||||||| Sbjct: 9958 gtggtgtacctttgtcgggaccccaaggac 9987 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctcaaggc 312 ||||||| ||||||||| ||||||||||| Sbjct: 18321 cccaagtccggcaccacatggctcaaggc 18349
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 48.1 bits (24), Expect = 0.071 Identities = 24/24 (100%) Strand = Plus / Minus Query: 806 ctgagcgaggaggaggagcgctcc 829 |||||||||||||||||||||||| Sbjct: 131615 ctgagcgaggaggaggagcgctcc 131592
>ref|NM_001054293.1| Oryza sativa (japonica cultivar-group) Os02g0684100 (Os02g0684100) mRNA, complete cds Length = 2433 Score = 48.1 bits (24), Expect = 0.071 Identities = 45/52 (86%) Strand = Plus / Plus Query: 513 ccggctgccgtgtggtgtacctgtgccgggaccccaaggacacgctcgtctc 564 |||| ||||| || || ||||||||||| |||||||||||| || ||||||| Sbjct: 1877 ccgggtgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 1928 Score = 42.1 bits (21), Expect = 4.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||| |||||||| |||| | || ||||||||||| ||||||||| Sbjct: 1610 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 1662
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.071 Identities = 45/52 (86%) Strand = Plus / Minus Query: 513 ccggctgccgtgtggtgtacctgtgccgggaccccaaggacacgctcgtctc 564 |||| ||||| || || ||||||||||| |||||||||||| || ||||||| Sbjct: 27986817 ccgggtgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 27986766 Score = 42.1 bits (21), Expect = 4.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 270 tcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||| |||||||| |||| | || ||||||||||| ||||||||| Sbjct: 27987084 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 27987032
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 48.1 bits (24), Expect = 0.071 Identities = 45/52 (86%) Strand = Plus / Minus Query: 513 ccggctgccgtgtggtgtacctgtgccgggaccccaaggacacgctcgtctc 564 |||| ||||| || || ||||||||||| |||||||||||| || ||||||| Sbjct: 30479 ccgggtgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 30428 Score = 42.1 bits (21), Expect = 4.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 270 tcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||| |||||||| |||| | || ||||||||||| ||||||||| Sbjct: 30746 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 48.1 bits (24), Expect = 0.071 Identities = 45/52 (86%) Strand = Plus / Minus Query: 513 ccggctgccgtgtggtgtacctgtgccgggaccccaaggacacgctcgtctc 564 |||| ||||| || || ||||||||||| |||||||||||| || ||||||| Sbjct: 114269 ccgggtgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 114218 Score = 42.1 bits (21), Expect = 4.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 270 tcctcgccacgcagcccaagtgcggcaccacctggctcaaggccctcgccttc 322 |||||||||| |||||||| |||| | || ||||||||||| ||||||||| Sbjct: 114536 tcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgccttc 114484
>ref|NM_001074369.1| Oryza sativa (japonica cultivar-group) Os11g0450300 (Os11g0450300) mRNA, complete cds Length = 1103 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 287 aagtgcggcaccacctggctcaaggccctcgcctt 321 ||||| || |||||||||||||| ||||||||||| Sbjct: 925 aagtgtggtaccacctggctcaaagccctcgcctt 891
>ref|NM_001074368.1| Oryza sativa (japonica cultivar-group) Os11g0450400 (Os11g0450400) mRNA, complete cds Length = 1011 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 287 aagtgcggcaccacctggctcaaggccctcgcctt 321 ||||| || |||||||||||||| ||||||||||| Sbjct: 181 aagtgtggtaccacctggctcaaagccctcgcctt 215
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0027D12 map near 50283S, complete sequence Length = 128988 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 287 aagtgcggcaccacctggctcaaggccctcgcctt 321 ||||| || |||||||||||||| ||||||||||| Sbjct: 36548 aagtgtggtaccacctggctcaaagccctcgcctt 36514
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgcagc 392 ||||||||||||||||||||||| Sbjct: 17841 gctcctcacccgccacccgcagc 17819 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgca 390 ||||||||||||||||||||| Sbjct: 17894 gctcctcacccgccacccgca 17874
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgcagc 392 ||||||||||||||||||||||| Sbjct: 145829 gctcctcacccgccacccgcagc 145807 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gctcctcacccgccacccgca 390 ||||||||||||||||||||| Sbjct: 145882 gctcctcacccgccacccgca 145862
>dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G02, full insert sequence Length = 1103 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 287 aagtgcggcaccacctggctcaaggccctcgcctt 321 ||||| || |||||||||||||| ||||||||||| Sbjct: 179 aagtgtggtaccacctggctcaaagccctcgcctt 213
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 ||||||||| |||||||||||||||| Sbjct: 31292 gtcctcttcttcaggtacgaggagat 31317
>dbj|AK241143.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065111M09, full insert sequence Length = 3553 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaa 549 |||||||||||||||||||| ||||| Sbjct: 2891 gtggtgtacctgtgccgggatcccaa 2916
>dbj|AK243653.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100088J11, full insert sequence Length = 1257 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 524 gtggtgtacctgtgccgggaccccaaggac 553 ||||||||||| || ||||||||||||||| Sbjct: 535 gtggtgtacctttgtcgggaccccaaggac 564
>ref|NM_001073472.1| Oryza sativa (japonica cultivar-group) Os12g0538300 (Os12g0538300) mRNA, complete cds Length = 2236 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 812 gaggaggaggagcgctccggcgtggc 837 |||||||||||| ||||||||||||| Sbjct: 87 gaggaggaggagggctccggcgtggc 62
>ref|NM_001059897.1| Oryza sativa (japonica cultivar-group) Os04g0526300 (Os04g0526300) mRNA, complete cds Length = 1041 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 ||||||||| |||||||||||||||| Sbjct: 700 gtcctcttcttcaggtacgaggagat 725
>ref|XM_001108385.1| PREDICTED: Macaca mulatta similar to semaphorin 3C, transcript variant 2 (LOC708633), mRNA Length = 5182 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 460 cccgtccccgcggctcctcgccacgc 485 |||||||||||||||||| ||||||| Sbjct: 101 cccgtccccgcggctccttgccacgc 126
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 790 gttcctcggcgtgccgctgagc 811 |||||||||||||||||||||| Sbjct: 236889 gttcctcggcgtgccgctgagc 236910
>ref|XM_880817.1| PREDICTED: Bos taurus similar to B cell RAG associated protein, transcript variant 2 (LOC534506), mRNA Length = 3955 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 gcagcccaagtgcggcaccacc 301 |||||||||||||||||||||| Sbjct: 760 gcagcccaagtgcggcaccacc 781
>ref|XM_614294.2| PREDICTED: Bos taurus similar to B cell RAG associated protein, transcript variant 1 (LOC534506), mRNA Length = 3891 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 gcagcccaagtgcggcaccacc 301 |||||||||||||||||||||| Sbjct: 780 gcagcccaagtgcggcaccacc 801
>ref|XM_544058.2| PREDICTED: Canis familiaris similar to B cell RAG associated protein (LOC486928), mRNA Length = 2259 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 gcagcccaagtgcggcaccacc 301 |||||||||||||||||||||| Sbjct: 1353 gcagcccaagtgcggcaccacc 1374
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 ||||||||| |||||||||||||||| Sbjct: 26294590 gtcctcttcttcaggtacgaggagat 26294615
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 725 gtcctcttcctcaggtacgaggagat 750 ||||||||| |||||||||||||||| Sbjct: 71167 gtcctcttcttcaggtacgaggagat 71192
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 tcggcgccgccgaccacccgct 372 |||||||||||||||||||||| Sbjct: 106655 tcggcgccgccgaccacccgct 106676
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 44.1 bits (22), Expect = 1.1 Identities = 40/45 (88%), Gaps = 2/45 (4%) Strand = Plus / Minus Query: 810 gcgaggaggaggagcg--ctccggcgtggccgaggaggtggcgag 852 |||||||||||||||| | |||||| || ||||||||||||||| Sbjct: 75087 gcgaggaggaggagcggacgccggcggggtcgaggaggtggcgag 75043
>dbj|AK067402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106G16, full insert sequence Length = 2238 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 812 gaggaggaggagcgctccggcgtggc 837 |||||||||||| ||||||||||||| Sbjct: 88 gaggaggaggagggctccggcgtggc 63
>emb|BX629359.1|CNS09SBT Tetraodon nigroviridis BAC sequence Length = 139693 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 817 ggaggagcgctccggcgtggccgagg 842 ||||||||||| |||||||||||||| Sbjct: 22079 ggaggagcgctgcggcgtggccgagg 22054
>gb|U67612.1|SCU67612 Streptomyces cinnamonensis coenzyme B12-dependent isobutyrylCoA mutase (icm) gene, complete cds Length = 4362 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 gacgaccgcgtcgacctcggcg 455 |||||||||||||||||||||| Sbjct: 943 gacgaccgcgtcgacctcggcg 922
>dbj|D78587.1| Balanus amphitrite gene for G protein-coupled receptor, complete cds Length = 3562 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 780 ggctcgcggggttcctcggcgtgccg 805 ||||||||||| |||||||||||||| Sbjct: 2137 ggctcgcggggctcctcggcgtgccg 2162
>dbj|D78363.1| Barnacle gene for G protein-coupled receptor Length = 1431 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 780 ggctcgcggggttcctcggcgtgccg 805 ||||||||||| |||||||||||||| Sbjct: 541 ggctcgcggggctcctcggcgtgccg 566
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 436 cgaccgcgtcgacctcggcgcgctc 460 |||| |||||||||||||||||||| Sbjct: 858526 cgacagcgtcgacctcggcgcgctc 858502
>ref|NM_001063834.1| Oryza sativa (japonica cultivar-group) Os06g0252800 (Os06g0252800) mRNA, partial cds Length = 1258 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctca 308 ||||||||||||||||| ||||||| Sbjct: 302 cccaagtgcggcaccacgtggctca 326
>ref|NM_001061053.1| Oryza sativa (japonica cultivar-group) Os05g0125200 (Os05g0125200) mRNA, complete cds Length = 2509 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcgccttcaccgtcgccaccc 335 ||||||||||||||||||||| Sbjct: 287 tcgccttcaccgtcgccaccc 307
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 cgaccgcgtcgacctcggcgcgctc 460 |||| |||||||||||||||||||| Sbjct: 4664171 cgacagcgtcgacctcggcgcgctc 4664195
>ref|XM_962354.1| PREDICTED: Tribolium castaneum similar to CG10465-PA (LOC655793), mRNA Length = 1489 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 811 cgaggaggaggagcgctccgg 831 ||||||||||||||||||||| Sbjct: 888 cgaggaggaggagcgctccgg 908
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcgccttcaccgtcgccaccc 335 ||||||||||||||||||||| Sbjct: 56269 tcgccttcaccgtcgccaccc 56289
>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete sequence Length = 193799 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1023 aggacaagctgcaggggtcag 1043 ||||||||||||||||||||| Sbjct: 2271 aggacaagctgcaggggtcag 2291
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence Length = 203708 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1023 aggacaagctgcaggggtcag 1043 ||||||||||||||||||||| Sbjct: 50092 aggacaagctgcaggggtcag 50072
>gb|AF348051.1| Paracaleana nigrita 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 701 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 351 tcggcgccgccgaccacccgctcctcacc 379 ||||||||||| |||||||||||| |||| Sbjct: 74 tcggcgccgcccaccacccgctccgcacc 102
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 cacgccagccatggccatggc 75 ||||||||||||||||||||| Sbjct: 1578507 cacgccagccatggccatggc 1578487
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcgccttcaccgtcgccaccc 335 ||||||||||||||||||||| Sbjct: 1394607 tcgccttcaccgtcgccaccc 1394627
>emb|AL603751.4| Human DNA sequence from clone RP11-84D2 on chromosome 6, complete sequence Length = 33473 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1073 tggtcttttccactctgctct 1093 ||||||||||||||||||||| Sbjct: 11097 tggtcttttccactctgctct 11077
>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the SOX1 gene for SRY (sex determining region Y)-box 1 protein and 7 CpG islands, complete sequence Length = 147665 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 tgtgccgggaccccaaggaca 554 ||||||||||||||||||||| Sbjct: 10541 tgtgccgggaccccaaggaca 10561
>gb|AF163765.1|AF163765 Allochromatium vinosum putative transcriptional regulator CysB (cysB) gene, partial cds; hydrogen sulfide:ferredoxin oxidoreductase (cysI), APS reductase (cysH), putative ATP sulfurylase small subunit (cysD), and putative ATP sulfurylase large subunit (cysN) genes, complete cds; and putative selenophosphate synthase (selD) gene, partial cds Length = 5693 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 892 ccaggtcggcggcgtcagcca 912 ||||||||||||||||||||| Sbjct: 4484 ccaggtcggcggcgtcagcca 4504
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctca 308 ||||||||||||||||| ||||||| Sbjct: 52620 cccaagtgcggcaccacgtggctca 52644
>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcgccttcaccgtcgccaccc 335 ||||||||||||||||||||| Sbjct: 288 tcgccttcaccgtcgccaccc 308
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 cccaagtgcggcaccacctggctca 308 ||||||||||||||||| ||||||| Sbjct: 303 cccaagtgcggcaccacgtggctca 327
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence Length = 204800 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1023 aggacaagctgcaggggtcag 1043 ||||||||||||||||||||| Sbjct: 49842 aggacaagctgcaggggtcag 49862 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 154,726,533 Number of extensions: 9297920 Number of successful extensions: 195686 Number of sequences better than 10.0: 102 Number of HSP's gapped: 195679 Number of HSP's successfully gapped: 181 Length of query: 1154 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1131 Effective length of database: 18,503,978,556 Effective search space: 20927999746836 Effective search space used: 20927999746836 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
