ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56l19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110435.1| Zea mays CL57831_1 mRNA sequence Length = 1116 Score = 258 bits (130), Expect = 4e-65 Identities = 253/294 (86%) Strand = Plus / Minus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggc 354 |||||||||||||||||| |||||||| |||||||||||| ||| || || ||||||| Sbjct: 811 ctccggcacgtccatggcgacgccgcatatcaccggcgtcgcggccctcgtcaagaaggt 752 Query: 355 gcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtccagcaccgc 414 ||||||||||||||| | | ||| ||||||||||||||||||||||||||||| ||| Sbjct: 751 gcacccggactggtccaccgccgcgatcaagtccgccatcatgaccacgtccagcgccgt 692 Query: 415 cgacaacgcggggaaccccatcatggacgaggagcaccggacggcgagcttctactcgat 474 |||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | Sbjct: 691 cgacaacgcgggcaaccagatcatggacgaggagcaccggaaggcgagcttctactccgt 632 Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| | |||| |||||||| |||||||| ||||| ||||||||||| Sbjct: 631 cggcgccggccacgttgtcccggcgaaggccgtagaccccggcctggtgtacgacctcgg 572 Query: 535 cgtgggcgactacagcgcctacatctgcgcgctgctcggcgaggcggccatgaa 588 ||| ||||||| || |||||||||| ||| ||||||||||||||| |||| Sbjct: 571 cgtccacgactacgccggctacatctgcaggctcctcggcgaggcggccctgaa 518 Score = 137 bits (69), Expect = 1e-28 Identities = 108/121 (89%) Strand = Plus / Minus Query: 130 cgtgaagccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccc 189 |||||| ||| |||||||||| || ||||||||||| ||||| || | || |||||||| Sbjct: 976 cgtgaatccgtcgccgatcgtggcagccttctcgtcgcgcggccccagcgtcgccagccc 917 Query: 190 cggcgtgctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccgtc 249 ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 916 cggagtgctgaagcccgacatcatggcgccggggctcaacatactcgccgcgtggccgtc 857 Query: 250 g 250 | Sbjct: 856 g 856 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 643 ggcgcagctgaactacccggcgatactggtgcc 675 |||||||||||| |||||||||||||||||||| Sbjct: 463 ggcgcagctgaattacccggcgatactggtgcc 431 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Minus Query: 11 aacctcccaatgtcacaggtgaccgcgaccgacggcgccaagatcatgggctacgcca 68 |||||||| ||||| |||||||||||| |||||| | ||||| ||||||||||||| Sbjct: 1095 aacctccccatgtcgcaggtgaccgcggtggacggcacaaagataatgggctacgcca 1038 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 779 aaggtggagccggaggcgctggagttcacg 808 ||||||||||||| || ||||||||||||| Sbjct: 327 aaggtggagccggcggagctggagttcacg 298
>ref|NM_001061879.1| Oryza sativa (japonica cultivar-group) Os05g0368700 (Os05g0368700) mRNA, partial cds Length = 1125 Score = 228 bits (115), Expect = 3e-56 Identities = 250/295 (84%) Strand = Plus / Plus Query: 286 caacgttgcctccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggt 345 |||||| | |||||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 292 caacgtcgtctccggcacgtccatggcgacgccgcacgtcaccggcgtcgtggcgctcat 351 Query: 346 gaagaaggcgcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||| |||||||||||||||||| || | ||||||| || |||||||| ||||| Sbjct: 352 caagaagctccacccggactggtcgccggcgatgatcaagtcggcgatcatgacgacgtc 411 Query: 406 cagcaccgccgacaacgcggggaaccccatcatggacgaggagcaccggacggcgagctt 465 |||| ||| ||||||| || || |||||||||||||||||||||||| |||||| | Sbjct: 412 cagcgccgtggacaacgacggccacgccatcatggacgaggagcaccggaaggcgaggct 471 Query: 466 ctactcgatcggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtcta 525 |||||| |||||||||| ||||| || |||| |||||| | ||||| || |||||||| Sbjct: 472 ctactccgtcggcgccggccacgtcgacccggcgaaggccatcgacccgggcctggtcta 531 Query: 526 cgacctcggcgtgggcgactacagcgcctacatctgcgcgctgctcggcgaggcg 580 |||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 532 cgacctcgccgccggcgactacgccgcctacatctgcgcgctcctcggcgaggcg 586 Score = 186 bits (94), Expect = 1e-43 Identities = 202/238 (84%) Strand = Plus / Plus Query: 13 cctcccaatgtcacaggtgaccgcgaccgacggcgccaagatcatgggctacgccagggt 72 |||||| ||||| ||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 13 cctccccatgtcgcaggtgaccgccggcgacggcgccaagatcatgggatacgccgcggt 72 Query: 73 gggctcgtcgggggctgcccacaccgcaacgatactgttcaacagctcgattgttcacgt 132 ||| ||| ||| || |||||| ||| ||||| ||||||||||| || | || ||| Sbjct: 73 ggggtcgccggccgcgtcccacaacgcgacgatcgtgttcaacagcacggtggtcggcgt 132 Query: 133 gaagccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccgg 192 |||||||| ||| | ||||||||||||||||| |||||||||| |||||| |||||||| Sbjct: 133 caagccggctccggtggtcgccgccttctcgtcgcgcgggccgagcgcggcgagccccgg 192 Query: 193 cgtgctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccgtcg 250 ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 193 cgtgccgaagccggacatcatggcgccggggctgaacatcctctccgcgtggccgtcg 250 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 613 gacgtgtgcggcggtggggtccatcccggaggcgcagctgaactacccggcgatactggt 672 |||||| ||||||| ||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 619 gacgtgcgcggcggcgggctccgtcgcggaggcgcagctgaactacccggcgatactggt 678 Query: 673 gcc 675 ||| Sbjct: 679 gcc 681 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 775 ggtgaaggtggagccggaggcgctggagttcacggcggcgatggagaagaaagcgttcac 834 ||||||||||||||||| || ||||| |||| || ||||||||||| ||| ||||| | Sbjct: 802 ggtgaaggtggagccggcggagctggtgttcgaggaggcgatggagaggaagacgttcgc 861 Query: 835 ggtgac 840 |||||| Sbjct: 862 ggtgac 867
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 228 bits (115), Expect = 3e-56 Identities = 250/295 (84%) Strand = Plus / Plus Query: 286 caacgttgcctccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggt 345 |||||| | |||||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 107854 caacgtcgtctccggcacgtccatggcgacgccgcacgtcaccggcgtcgtggcgctcat 107913 Query: 346 gaagaaggcgcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||| |||||||||||||||||| || | ||||||| || |||||||| ||||| Sbjct: 107914 caagaagctccacccggactggtcgccggcgatgatcaagtcggcgatcatgacgacgtc 107973 Query: 406 cagcaccgccgacaacgcggggaaccccatcatggacgaggagcaccggacggcgagctt 465 |||| ||| ||||||| || || |||||||||||||||||||||||| |||||| | Sbjct: 107974 cagcgccgtggacaacgacggccacgccatcatggacgaggagcaccggaaggcgaggct 108033 Query: 466 ctactcgatcggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtcta 525 |||||| |||||||||| ||||| || |||| |||||| | ||||| || |||||||| Sbjct: 108034 ctactccgtcggcgccggccacgtcgacccggcgaaggccatcgacccgggcctggtcta 108093 Query: 526 cgacctcggcgtgggcgactacagcgcctacatctgcgcgctgctcggcgaggcg 580 |||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 108094 cgacctcgccgccggcgactacgccgcctacatctgcgcgctcctcggcgaggcg 108148 Score = 186 bits (94), Expect = 1e-43 Identities = 202/238 (84%) Strand = Plus / Plus Query: 13 cctcccaatgtcacaggtgaccgcgaccgacggcgccaagatcatgggctacgccagggt 72 |||||| ||||| ||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 107575 cctccccatgtcgcaggtgaccgccggcgacggcgccaagatcatgggatacgccgcggt 107634 Query: 73 gggctcgtcgggggctgcccacaccgcaacgatactgttcaacagctcgattgttcacgt 132 ||| ||| ||| || |||||| ||| ||||| ||||||||||| || | || ||| Sbjct: 107635 ggggtcgccggccgcgtcccacaacgcgacgatcgtgttcaacagcacggtggtcggcgt 107694 Query: 133 gaagccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccgg 192 |||||||| ||| | ||||||||||||||||| |||||||||| |||||| |||||||| Sbjct: 107695 caagccggctccggtggtcgccgccttctcgtcgcgcgggccgagcgcggcgagccccgg 107754 Query: 193 cgtgctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccgtcg 250 ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 107755 cgtgccgaagccggacatcatggcgccggggctgaacatcctctccgcgtggccgtcg 107812 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 613 gacgtgtgcggcggtggggtccatcccggaggcgcagctgaactacccggcgatactggt 672 |||||| ||||||| ||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 108181 gacgtgcgcggcggcgggctccgtcgcggaggcgcagctgaactacccggcgatactggt 108240 Query: 673 gcc 675 ||| Sbjct: 108241 gcc 108243 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 775 ggtgaaggtggagccggaggcgctggagttcacggcggcgatggagaagaaagcgttcac 834 ||||||||||||||||| || ||||| |||| || ||||||||||| ||| ||||| | Sbjct: 108364 ggtgaaggtggagccggcggagctggtgttcgaggaggcgatggagaggaagacgttcgc 108423 Query: 835 ggtgac 840 |||||| Sbjct: 108424 ggtgac 108429
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 228 bits (115), Expect = 3e-56 Identities = 250/295 (84%) Strand = Plus / Plus Query: 286 caacgttgcctccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggt 345 |||||| | |||||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 17578049 caacgtcgtctccggcacgtccatggcgacgccgcacgtcaccggcgtcgtggcgctcat 17578108 Query: 346 gaagaaggcgcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||| |||||||||||||||||| || | ||||||| || |||||||| ||||| Sbjct: 17578109 caagaagctccacccggactggtcgccggcgatgatcaagtcggcgatcatgacgacgtc 17578168 Query: 406 cagcaccgccgacaacgcggggaaccccatcatggacgaggagcaccggacggcgagctt 465 |||| ||| ||||||| || || |||||||||||||||||||||||| |||||| | Sbjct: 17578169 cagcgccgtggacaacgacggccacgccatcatggacgaggagcaccggaaggcgaggct 17578228 Query: 466 ctactcgatcggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtcta 525 |||||| |||||||||| ||||| || |||| |||||| | ||||| || |||||||| Sbjct: 17578229 ctactccgtcggcgccggccacgtcgacccggcgaaggccatcgacccgggcctggtcta 17578288 Query: 526 cgacctcggcgtgggcgactacagcgcctacatctgcgcgctgctcggcgaggcg 580 |||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 17578289 cgacctcgccgccggcgactacgccgcctacatctgcgcgctcctcggcgaggcg 17578343 Score = 186 bits (94), Expect = 1e-43 Identities = 202/238 (84%) Strand = Plus / Plus Query: 13 cctcccaatgtcacaggtgaccgcgaccgacggcgccaagatcatgggctacgccagggt 72 |||||| ||||| ||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 17577770 cctccccatgtcgcaggtgaccgccggcgacggcgccaagatcatgggatacgccgcggt 17577829 Query: 73 gggctcgtcgggggctgcccacaccgcaacgatactgttcaacagctcgattgttcacgt 132 ||| ||| ||| || |||||| ||| ||||| ||||||||||| || | || ||| Sbjct: 17577830 ggggtcgccggccgcgtcccacaacgcgacgatcgtgttcaacagcacggtggtcggcgt 17577889 Query: 133 gaagccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccgg 192 |||||||| ||| | ||||||||||||||||| |||||||||| |||||| |||||||| Sbjct: 17577890 caagccggctccggtggtcgccgccttctcgtcgcgcgggccgagcgcggcgagccccgg 17577949 Query: 193 cgtgctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccgtcg 250 ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 17577950 cgtgccgaagccggacatcatggcgccggggctgaacatcctctccgcgtggccgtcg 17578007 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 613 gacgtgtgcggcggtggggtccatcccggaggcgcagctgaactacccggcgatactggt 672 |||||| ||||||| ||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 17578376 gacgtgcgcggcggcgggctccgtcgcggaggcgcagctgaactacccggcgatactggt 17578435 Query: 673 gcc 675 ||| Sbjct: 17578436 gcc 17578438 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 775 ggtgaaggtggagccggaggcgctggagttcacggcggcgatggagaagaaagcgttcac 834 ||||||||||||||||| || ||||| |||| || ||||||||||| ||| ||||| | Sbjct: 17578559 ggtgaaggtggagccggcggagctggtgttcgaggaggcgatggagaggaagacgttcgc 17578618 Query: 835 ggtgac 840 |||||| Sbjct: 17578619 ggtgac 17578624
>dbj|AK064686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D11, full insert sequence Length = 1125 Score = 228 bits (115), Expect = 3e-56 Identities = 250/295 (84%) Strand = Plus / Plus Query: 286 caacgttgcctccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggt 345 |||||| | |||||||||||||||||| |||||||||||||||||||||||||| || | Sbjct: 292 caacgtcgtctccggcacgtccatggcgacgccgcacgtcaccggcgtcgtggcgctcat 351 Query: 346 gaagaaggcgcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||| |||||||||||||||||| || | ||||||| || |||||||| ||||| Sbjct: 352 caagaagctccacccggactggtcgccggcgatgatcaagtcggcgatcatgacgacgtc 411 Query: 406 cagcaccgccgacaacgcggggaaccccatcatggacgaggagcaccggacggcgagctt 465 |||| ||| ||||||| || || |||||||||||||||||||||||| |||||| | Sbjct: 412 cagcgccgtggacaacgacggccacgccatcatggacgaggagcaccggaaggcgaggct 471 Query: 466 ctactcgatcggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtcta 525 |||||| |||||||||| ||||| || |||| |||||| | ||||| || |||||||| Sbjct: 472 ctactccgtcggcgccggccacgtcgacccggcgaaggccatcgacccgggcctggtcta 531 Query: 526 cgacctcggcgtgggcgactacagcgcctacatctgcgcgctgctcggcgaggcg 580 |||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 532 cgacctcgccgccggcgactacgccgcctacatctgcgcgctcctcggcgaggcg 586 Score = 186 bits (94), Expect = 1e-43 Identities = 202/238 (84%) Strand = Plus / Plus Query: 13 cctcccaatgtcacaggtgaccgcgaccgacggcgccaagatcatgggctacgccagggt 72 |||||| ||||| ||||||||||| ||||||||||||||||||||| |||||| ||| Sbjct: 13 cctccccatgtcgcaggtgaccgccggcgacggcgccaagatcatgggatacgccgcggt 72 Query: 73 gggctcgtcgggggctgcccacaccgcaacgatactgttcaacagctcgattgttcacgt 132 ||| ||| ||| || |||||| ||| ||||| ||||||||||| || | || ||| Sbjct: 73 ggggtcgccggccgcgtcccacaacgcgacgatcgtgttcaacagcacggtggtcggcgt 132 Query: 133 gaagccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccgg 192 |||||||| ||| | ||||||||||||||||| |||||||||| |||||| |||||||| Sbjct: 133 caagccggctccggtggtcgccgccttctcgtcgcgcgggccgagcgcggcgagccccgg 192 Query: 193 cgtgctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccgtcg 250 ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 193 cgtgccgaagccggacatcatggcgccggggctgaacatcctctccgcgtggccgtcg 250 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 613 gacgtgtgcggcggtggggtccatcccggaggcgcagctgaactacccggcgatactggt 672 |||||| ||||||| ||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 619 gacgtgcgcggcggcgggctccgtcgcggaggcgcagctgaactacccggcgatactggt 678 Query: 673 gcc 675 ||| Sbjct: 679 gcc 681 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 775 ggtgaaggtggagccggaggcgctggagttcacggcggcgatggagaagaaagcgttcac 834 ||||||||||||||||| || ||||| |||| || ||||||||||| ||| ||||| | Sbjct: 802 ggtgaaggtggagccggcggagctggtgttcgaggaggcgatggagaggaagacgttcgc 861 Query: 835 ggtgac 840 |||||| Sbjct: 862 ggtgac 867
>ref|NM_001056959.1| Oryza sativa (japonica cultivar-group) Os03g0430500 (Os03g0430500) mRNA, complete cds Length = 2358 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Plus Query: 137 ccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgtg 196 |||||||| | ||||||| ||||||||||||| || |||| | || | ||| |||||| Sbjct: 1498 ccggcgcccaccgtcgcctccttctcgtcccggggaccgagcaaggtcgccccgggcgtg 1557 Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||| ||| || |||||||||||||||||||||||||||| |||||| Sbjct: 1558 ctcaagccggacgtcctggcgccggggctcaacatcctcgccgcatggccg 1608 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcga 737 |||||||| || ||| ||||||||||| ||||| |||||||||| ||||| Sbjct: 2082 gccgttcacggtgaaccggacggtgacgaacgtcgggccggccaggtcga 2131 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctacatctgcgcgctgctcgg 573 ||||||||||||||||||||| Sbjct: 1920 ctacatctgcgcgctgctcgg 1940
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Minus Query: 137 ccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgtg 196 |||||||| | ||||||| ||||||||||||| || |||| | || | ||| |||||| Sbjct: 25348 ccggcgcccaccgtcgcctccttctcgtcccggggaccgagcaaggtcgccccgggcgtg 25289 Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||| ||| || |||||||||||||||||||||||||||| |||||| Sbjct: 25288 ctcaagccggacgtcctggcgccggggctcaacatcctcgccgcatggccg 25238 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcga 737 |||||||| || ||| ||||||||||| ||||| |||||||||| ||||| Sbjct: 24764 gccgttcacggtgaaccggacggtgacgaacgtcgggccggccaggtcga 24715 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 ctacatctgcgcgctgctcgg 573 ||||||||||||||||||||| Sbjct: 24926 ctacatctgcgcgctgctcgg 24906
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Plus Query: 137 ccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgtg 196 |||||||| | ||||||| ||||||||||||| || |||| | || | ||| |||||| Sbjct: 17860308 ccggcgcccaccgtcgcctccttctcgtcccggggaccgagcaaggtcgccccgggcgtg 17860367 Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||| ||| || |||||||||||||||||||||||||||| |||||| Sbjct: 17860368 ctcaagccggacgtcctggcgccggggctcaacatcctcgccgcatggccg 17860418 Score = 65.9 bits (33), Expect = 3e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 136 gccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgt 195 |||||||||| |||||| |||||||||||| ||||||||| ||||||||| ||||| Sbjct: 1014813 gccggcgccgtccgtcgcgttcttctcgtcccgggggccgaacaaggccagcccgggcgt 1014754 Query: 196 gctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 || ||||| ||||||| | ||| || | |||||||||||||||||| Sbjct: 1014753 tctgaagcctgacatcaccgggcccggcatgaacatcctcgccgcgtgg 1014705 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcga 737 |||||||| || ||| ||||||||||| ||||| |||||||||| ||||| Sbjct: 17860892 gccgttcacggtgaaccggacggtgacgaacgtcgggccggccaggtcga 17860941 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 22505431 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 22505475 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctacatctgcgcgctgctcgg 573 ||||||||||||||||||||| Sbjct: 17860730 ctacatctgcgcgctgctcgg 17860750 Score = 42.1 bits (21), Expect = 4.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| || |||||| ||||| ||||| || || |||||||||||||| Sbjct: 22505730 cggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcgg 22505789 Query: 535 c 535 | Sbjct: 22505790 c 22505790
>ref|NM_001067215.1| Oryza sativa (japonica cultivar-group) Os07g0685900 (Os07g0685900) mRNA, complete cds Length = 2601 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggcc 246 |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1527 ctcaagccggacatcatggcaccaggtctcaacatcctcgccgcgtggcc 1576 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcgaggtacac 744 |||||||| || ||| ||||||||||||||||| |||||||| |||||| |||||| Sbjct: 2036 gccgttcacggtgaaccggacggtgaccaacgtcgggccggcggagtcgacgtacac 2092 Score = 48.1 bits (24), Expect = 0.070 Identities = 84/104 (80%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcg 355 ||||||||||||||||| |||||||| || | ||||| | ||| || || |||| | Sbjct: 1632 tccggcacgtccatggcgacgccgcatgtgagtggcgtggcggcgcttgtcaagagcgtc 1691 Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||||| |||||||||||| | || |||||||||||||| |||| Sbjct: 1692 caccccgactggtcgccggccgccatcaagtccgccatcttgac 1735
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggcc 246 |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 29078221 ctcaagccggacatcatggcaccaggtctcaacatcctcgccgcgtggcc 29078270 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcgaggtacac 744 |||||||| || ||| ||||||||||||||||| |||||||| |||||| |||||| Sbjct: 29078730 gccgttcacggtgaaccggacggtgaccaacgtcgggccggcggagtcgacgtacac 29078786 Score = 48.1 bits (24), Expect = 0.070 Identities = 84/104 (80%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcg 355 ||||||||||||||||| |||||||| || | ||||| | ||| || || |||| | Sbjct: 29078326 tccggcacgtccatggcgacgccgcatgtgagtggcgtggcggcgcttgtcaagagcgtc 29078385 Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||||| |||||||||||| | || |||||||||||||| |||| Sbjct: 29078386 caccccgactggtcgccggccgccatcaagtccgccatcttgac 29078429 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||||||| | | ||||||||||| ||||||||||| || |||||| Sbjct: 23346169 ctcaagcccgacgttctcgcgccggggctgaacatcctcgcggcctggccg 23346219
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggcc 246 |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 13339 ctcaagccggacatcatggcaccaggtctcaacatcctcgccgcgtggcc 13388 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcgaggtacac 744 |||||||| || ||| ||||||||||||||||| |||||||| |||||| |||||| Sbjct: 13848 gccgttcacggtgaaccggacggtgaccaacgtcgggccggcggagtcgacgtacac 13904 Score = 48.1 bits (24), Expect = 0.070 Identities = 84/104 (80%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcg 355 ||||||||||||||||| |||||||| || | ||||| | ||| || || |||| | Sbjct: 13444 tccggcacgtccatggcgacgccgcatgtgagtggcgtggcggcgcttgtcaagagcgtc 13503 Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||||| |||||||||||| | || |||||||||||||| |||| Sbjct: 13504 caccccgactggtcgccggccgccatcaagtccgccatcttgac 13547
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggcc 246 |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 26178 ctcaagccggacatcatggcaccaggtctcaacatcctcgccgcgtggcc 26227 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcgaggtacac 744 |||||||| || ||| ||||||||||||||||| |||||||| |||||| |||||| Sbjct: 26687 gccgttcacggtgaaccggacggtgaccaacgtcgggccggcggagtcgacgtacac 26743 Score = 48.1 bits (24), Expect = 0.070 Identities = 84/104 (80%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcg 355 ||||||||||||||||| |||||||| || | ||||| | ||| || || |||| | Sbjct: 26283 tccggcacgtccatggcgacgccgcatgtgagtggcgtggcggcgcttgtcaagagcgtc 26342 Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||||| |||||||||||| | || |||||||||||||| |||| Sbjct: 26343 caccccgactggtcgccggccgccatcaagtccgccatcttgac 26386
>dbj|AK119348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E09, full insert sequence Length = 2601 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggcc 246 |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 1527 ctcaagccggacatcatggcaccaggtctcaacatcctcgccgcgtggcc 1576 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 688 gccgttcaaggcgaagcggacggtgaccaacgtggggccggccaagtcgaggtacac 744 |||||||| || ||| ||||||||||||||||| |||||||| |||||| |||||| Sbjct: 2036 gccgttcacggtgaaccggacggtgaccaacgtcgggccggcggagtcgacgtacac 2092 Score = 48.1 bits (24), Expect = 0.070 Identities = 84/104 (80%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcg 355 ||||||||||||||||| |||||||| || | ||||| | ||| || || |||| | Sbjct: 1632 tccggcacgtccatggcgacgccgcatgtgagtggcgtggcggcgcttgtcaagagcgtc 1691 Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||||| |||||||||||| | || |||||||||||||| |||| Sbjct: 1692 caccccgactggtcgccggccgccatcaagtccgccatcttgac 1735
>ref|NM_001055313.1| Oryza sativa (japonica cultivar-group) Os03g0119300 (Os03g0119300) mRNA, complete cds Length = 2604 Score = 65.9 bits (33), Expect = 3e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 136 gccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgt 195 |||||||||| |||||| |||||||||||| ||||||||| ||||||||| ||||| Sbjct: 1542 gccggcgccgtccgtcgcgttcttctcgtcccgggggccgaacaaggccagcccgggcgt 1601 Query: 196 gctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 || ||||| ||||||| | ||| || | |||||||||||||||||| Sbjct: 1602 tctgaagcctgacatcaccgggcccggcatgaacatcctcgccgcgtgg 1650
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 65.9 bits (33), Expect = 3e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 136 gccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgt 195 |||||||||| |||||| |||||||||||| ||||||||| ||||||||| ||||| Sbjct: 35030 gccggcgccgtccgtcgcgttcttctcgtcccgggggccgaacaaggccagcccgggcgt 34971 Query: 196 gctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 || ||||| ||||||| | ||| || | |||||||||||||||||| Sbjct: 34970 tctgaagcctgacatcaccgggcccggcatgaacatcctcgccgcgtgg 34922
>dbj|AK069220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012L19, full insert sequence Length = 2605 Score = 65.9 bits (33), Expect = 3e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 136 gccggcgccgatcgtcgccgccttctcgtcccgcgggccgaacgcggccagccccggcgt 195 |||||||||| |||||| |||||||||||| ||||||||| ||||||||| ||||| Sbjct: 1543 gccggcgccgtccgtcgcgttcttctcgtcccgggggccgaacaaggccagcccgggcgt 1602 Query: 196 gctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 || ||||| ||||||| | ||| || | |||||||||||||||||| Sbjct: 1603 tctgaagcctgacatcaccgggcccggcatgaacatcctcgccgcgtgg 1651
>emb|CR855240.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0103C08-B0602B01, complete sequence Length = 150079 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 355 gcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccac 402 ||||||| ||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 66853 gcacccgcactggtcgccggcggcgatcaagtcggccatcatgaccac 66806
>ref|NM_001060072.1| Oryza sativa (japonica cultivar-group) Os04g0559000 (Os04g0559000) mRNA, complete cds Length = 2283 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 355 gcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccac 402 ||||||| ||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 1680 gcacccgcactggtcgccggcggcgatcaagtcggccatcatgaccac 1727
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 355 gcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccac 402 ||||||| ||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 27975512 gcacccgcactggtcgccggcggcgatcaagtcggccatcatgaccac 27975465 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgt 333 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 21368935 ctccggcacgtccatggcgtcgccgcacgtcgccggcgt 21368973 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 2022094 ccggactggtcgccgtcggcg 2022114
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 355 gcacccggactggtcgccgtcggcggtcaagtccgccatcatgaccac 402 ||||||| ||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 138365 gcacccgcactggtcgccggcggcgatcaagtcggccatcatgaccac 138318
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 191 ggcgtgctcaagcccgacatcatggcgccgggg 223 |||||||||||||| |||||||||||||||||| Sbjct: 37641775 ggcgtgctcaagccggacatcatggcgccgggg 37641807 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 catggacgaggagcaccggacg 457 |||||||||||||||||||||| Sbjct: 2850601 catggacgaggagcaccggacg 2850580 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 agccggcgccgatcgtcgccgc 156 |||||||||||||||||||||| Sbjct: 21404410 agccggcgccgatcgtcgccgc 21404431 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 37646619 gtgctcaagccggacatcatggcgcc 37646644
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 58.0 bits (29), Expect = 7e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 191 ggcgtgctcaagcccgacatcatggcgccgggg 223 |||||||||||||| |||||||||||||||||| Sbjct: 102249 ggcgtgctcaagccggacatcatggcgccgggg 102281 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 107093 gtgctcaagccggacatcatggcgcc 107118
>emb|CR855163.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0160I14, complete sequence Length = 73693 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgt 333 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 17412 ctccggcacgtccatggcgtcgccgcacgtcgccggcgt 17450
>ref|NM_001059355.1| Oryza sativa (japonica cultivar-group) Os04g0430700 (Os04g0430700) mRNA, complete cds Length = 2571 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgt 333 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 1646 ctccggcacgtccatggcgtcgccgcacgtcgccggcgt 1684
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgt 333 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 18685 ctccggcacgtccatggcgtcgccgcacgtcgccggcgt 18723
>dbj|AK105112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G01, full insert sequence Length = 2571 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgt 333 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 1646 ctccggcacgtccatggcgtcgccgcacgtcgccggcgt 1684
>gb|AC186748.1| Musa acuminata clone MA4_8L21, complete sequence Length = 113519 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Minus Query: 474 tcggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacct 531 |||||||||| |||||||| || | |||||| |||||||||| || ||||||||||| Sbjct: 15898 tcggcgccggccacgtggacccgccgaaggccctggaccccggcctcgtctacgacct 15841
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcg 332 |||||| ||||| ||||| ||||||||||||||||||| Sbjct: 3439008 ctccggtacgtcgatggcgacgccgcacgtcaccggcg 3439045 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 796 gctggagttcacggcggcgatggag 820 ||||||| ||||||||||||||||| Sbjct: 7822653 gctggaggtcacggcggcgatggag 7822629
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 52.0 bits (26), Expect = 0.004 Identities = 32/34 (94%) Strand = Plus / Minus Query: 296 tccggcacgtccatggccacgccgcacgtcaccg 329 ||||||||||| |||||| ||||||||||||||| Sbjct: 1554928 tccggcacgtcgatggccgcgccgcacgtcaccg 1554895
>gb|AY108210.1| Zea mays PCO096605 mRNA sequence Length = 1795 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 503 gccgtggaccccggtctggtctacgacctcggcgtgggcgactacagcgcctacatctgc 562 ||||| ||||| || ||||| ||||||||||||| ||||| |||| ||||||| ||||| Sbjct: 990 gccgtcgacccggggctggtgtacgacctcggcgccggcgagtacatcgcctacctctgc 1049 Query: 563 gcgctg 568 | |||| Sbjct: 1050 gggctg 1055 Score = 48.1 bits (24), Expect = 0.070 Identities = 48/56 (85%) Strand = Plus / Plus Query: 157 cttctcgtcccgcgggccgaacgcggccagccccggcgtgctcaagcccgacatca 212 ||||||||| |||||||||||| ||| ||||| ||| | || ||||||||||||| Sbjct: 635 cttctcgtcgcgcgggccgaacaaggcgagcccgggcatcctgaagcccgacatca 690
>dbj|D00923.1|APEALP Acremonium chrysogenum gene for alkaline protease, complete cds Length = 3152 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 295 ctccggcacgtccatggccacgccgcacgtcaccggcgtcgt 336 ||||||||| ||||||||||| || || |||||||||||||| Sbjct: 2130 ctccggcacctccatggccaccccccatgtcaccggcgtcgt 2171
>emb|CT833310.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241J08, full insert sequence Length = 2895 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 1619 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 1663
>ref|NM_001057169.1| Oryza sativa (japonica cultivar-group) Os03g0605300 (Os03g0605300) mRNA, complete cds Length = 2517 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 1535 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 1579 Score = 42.1 bits (21), Expect = 4.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| || |||||| ||||| ||||| || || |||||||||||||| Sbjct: 1834 cggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcgg 1893 Query: 535 c 535 | Sbjct: 1894 c 1894
>ref|NM_001054200.1| Oryza sativa (japonica cultivar-group) Os02g0665300 (Os02g0665300) mRNA, complete cds Length = 3191 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 1734 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 1793 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 1794 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 1834
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Minus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 155744 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 155700 Score = 42.1 bits (21), Expect = 4.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| || |||||| ||||| ||||| || || |||||||||||||| Sbjct: 155445 cggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcgg 155386 Query: 535 c 535 | Sbjct: 155385 c 155385
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 107649 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 107693 Score = 42.1 bits (21), Expect = 4.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| || |||||| ||||| ||||| || || |||||||||||||| Sbjct: 107948 cggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcgg 108007 Query: 535 c 535 | Sbjct: 108008 c 108008
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Minus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtg 346 |||||| || |||||| |||||||||| ||||||||||||| |||||| Sbjct: 4225051 cggcacctcgatggcctcgccgcacgtggccggcgtcgtggcgctggtg 4225003
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 27038753 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 27038812 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 27038813 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 27038853
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 91955 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 92014 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 92015 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 92055
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 10402 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 10461 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 10462 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 10502
>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full insert sequence Length = 2517 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 aagcccgacatcatggcgccggggctcaacatcctcgccgcgtgg 244 ||||| |||||||| ||||||||| | ||||||||||| |||||| Sbjct: 1535 aagccggacatcatcgcgccgggggtgaacatcctcgcggcgtgg 1579 Score = 42.1 bits (21), Expect = 4.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 475 cggcgccgggcacgtggatgcggccaaggccgtggaccccggtctggtctacgacctcgg 534 ||||||||| ||||| || |||||| ||||| ||||| || || |||||||||||||| Sbjct: 1834 cggcgccggccacgtcgacccggccagcgccgtcgacccgggactcgtctacgacctcgg 1893 Query: 535 c 535 | Sbjct: 1894 c 1894
>dbj|AK100551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103I17, full insert sequence Length = 2893 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 1822 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 1881 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 1882 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 1922
>dbj|AK072929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148I21, full insert sequence Length = 3195 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 1737 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 1796 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 1797 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 1837
>dbj|AB037371.1| Oryza sativa (japonica cultivar-group) rsp1 mRNA for subtilisin-like serine protease, complete cds Length = 3026 Score = 50.1 bits (25), Expect = 0.018 Identities = 82/101 (81%) Strand = Plus / Plus Query: 299 ggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtgaagaaggcgcac 358 |||||||||||||| |||||||| ||| ||| ||| || ||| | ||||| |||||| Sbjct: 1900 ggcacgtccatggcggcgccgcacctcagcgggatcgccgcgctgatcaagaaagcgcac 1959 Query: 359 ccggactggtcgccgtcggcggtcaagtccgccatcatgac 399 ||| | ||||| ||| ||||| ||||||| ||||| ||||| Sbjct: 1960 ccgaagtggtcaccggcggcgatcaagtcggccatgatgac 2000
>ref|NM_001066629.1| Oryza sativa (japonica cultivar-group) Os07g0578300 (Os07g0578300) mRNA, complete cds Length = 2445 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||||||| | | ||||||||||| ||||||||||| || |||||| Sbjct: 1540 ctcaagcccgacgttctcgcgccggggctgaacatcctcgcggcctggccg 1590
>ref|XM_524058.2| PREDICTED: Pan troglodytes zinc finger and BTB domain containing 7A (ZBTB7A), mRNA Length = 3637 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 422 gccgacgcgggcgccgacgccgggcagctgg 452
>gb|BC113511.1| Homo sapiens zinc finger and BTB domain containing 7A, mRNA (cDNA clone MGC:142071 IMAGE:8322563), complete cds Length = 1905 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 476 gccgacgcgggcgccgacgccgggcagctgg 506
>ref|XR_014658.1| PREDICTED: Macaca mulatta similar to Zinc finger and BTB domain-containing protein 7A (Leukemia/lymphoma related factor) (Factor that binds to inducer of short transcripts protein 1) (Factor binding IST protein 1) (FBI-1) (HIV-1 1st-binding protein 1) (TTF-I-interacting pep... (LOC721817), mRNA Length = 5673 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 983 gccgacgcgggcgccgacgccgggcagctgg 1013
>gb|BC064505.1| Homo sapiens cDNA clone IMAGE:6536313, **** WARNING: chimeric clone **** Length = 3709 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 613 gccgacgcgggcgccgacgccgggcagctgg 643
>ref|NM_015898.2| Homo sapiens zinc finger and BTB domain containing 7A (ZBTB7A), mRNA Length = 4456 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 552 gccgacgcgggcgccgacgccgggcagctgg 582
>ref|XM_542166.2| PREDICTED: Canis familiaris similar to Zinc finger and BTB domain containing protein 7 (Leukemia/lymphoma related factor) (Factor that binds to inducer of short transcripts protein 1) (Factor binding IST protein 1) (FBI-1) (HIV-1 1st-binding protein 1) (TTF-I interacting pept... (LOC485048), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 671 gccgacgcgggcgccgacgccgggcagctgg 701
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 390 ccatcatgaccacgtccagcacc 412 ||||||||||||||||||||||| Sbjct: 102523 ccatcatgaccacgtccagcacc 102545
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 390 ccatcatgaccacgtccagcacc 412 ||||||||||||||||||||||| Sbjct: 175542 ccatcatgaccacgtccagcacc 175564
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 390 ccatcatgaccacgtccagcacc 412 ||||||||||||||||||||||| Sbjct: 57190 ccatcatgaccacgtccagcacc 57168
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||||||| | | ||||||||||| ||||||||||| || |||||| Sbjct: 27393 ctcaagcccgacgttctcgcgccggggctgaacatcctcgcggcctggccg 27443
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||||||| | | ||||||||||| ||||||||||| || |||||| Sbjct: 101427 ctcaagcccgacgttctcgcgccggggctgaacatcctcgcggcctggccg 101477
>gb|BC084568.1| Homo sapiens zinc finger and BTB domain containing 7A, mRNA (cDNA clone MGC:99631 IMAGE:6379572), complete cds Length = 1853 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 475 gccgacgcgggcgccgacgccgggcagctgg 505
>dbj|AK107610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-C05, full insert sequence Length = 2445 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 197 ctcaagcccgacatcatggcgccggggctcaacatcctcgccgcgtggccg 247 |||||||||||| | | ||||||||||| ||||||||||| || |||||| Sbjct: 1540 ctcaagcccgacgttctcgcgccggggctgaacatcctcgcggcctggccg 1590
>gb|AY107716.1| Zea mays PCO066093 mRNA sequence Length = 1217 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 296 tccggcacgtccatggccacgccgcac 322 |||||||||||||||||| |||||||| Sbjct: 789 tccggcacgtccatggccgcgccgcac 815
>gb|AF097916.1|AF097916 Homo sapiens HIV-1 inducer of short transcripts binding protein (FBI1) mRNA, complete cds Length = 1755 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 400 gccgacgcgggcgccgacgccgggcagctgg 430
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcg 332 |||||| || |||||||||||||||||| |||||| Sbjct: 232632 cggcacctcgatggccacgccgcacgtcgccggcg 232598 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 296 tccggcacgtccatggccacgccgcacgt 324 |||||||| || ||||||||||||||||| Sbjct: 217283 tccggcacctcgatggccacgccgcacgt 217255
>gb|AF000561.1|AF000561 Homo sapiens TTF-I interacting peptide 21 mRNA, partial cds Length = 1936 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 557 gccgacgcgggcgccgacgccgggcagctgg 587
>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence Length = 205642 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Minus Query: 857 gccgacgcggacgccaacgccgggcagctgg 887 |||||||||| |||| ||||||||||||||| Sbjct: 79870 gccgacgcgggcgccgacgccgggcagctgg 79840
>dbj|D78380.1|SMASSPH Serratia marcescens DNA for SSP-h1 and SSP-h2, complete cds Length = 7030 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcg 332 |||||| || ||||| ||||||||||||||||||| Sbjct: 4886 cggcacctcgatggcgacgccgcacgtcaccggcg 4920
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 352 ggcgcacccggactggtcgccg 373 |||||||||||||||||||||| Sbjct: 3443918 ggcgcacccggactggtcgccg 3443939
>dbj|AK242776.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090054H22, full insert sequence Length = 2684 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 1899 tcaagtccgccatcatgaccac 1920
>ref|NM_001075097.1| Oryza sativa (japonica cultivar-group) Os11g0708900 (Os11g0708900) mRNA, complete cds Length = 2103 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 981 tgctccttgtccttggcatgcttctt 1006 |||||||||||||||||| ||||||| Sbjct: 992 tgctccttgtccttggcaagcttctt 967
>ref|NM_001071644.1| Oryza sativa (japonica cultivar-group) Os10g0524600 (Os10g0524600) mRNA, complete cds Length = 2541 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||||||||||| || ||||| ||||||| || |||||||| ||||| Sbjct: 1701 cacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtc 1750
>ref|NM_001070018.1| Oryza sativa (japonica cultivar-group) Os09g0479900 (Os09g0479900) mRNA, complete cds Length = 1899 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 1262 tcaagtccgccatcatgaccac 1283
>ref|NM_001051457.1| Oryza sativa (japonica cultivar-group) Os01g0868900 (Os01g0868900) mRNA, complete cds Length = 2548 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 1527 gtgctcaagccggacatcatggcgcc 1552
>ref|XM_363008.1| Magnaporthe grisea 70-15 hypothetical protein (MG08429.4) partial mRNA Length = 2976 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcgtcgtggc 339 ||||||||||||||||||||| || | ||||||||||||| Sbjct: 1803 cggcacgtccatggccacgccatacctggccggcgtcgtggc 1844
>ref|XM_364972.1| Magnaporthe grisea 70-15 hypothetical protein (MG09817.4) partial mRNA Length = 2709 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 298 cggcacgtccatggccacgccgcacgtcaccggc 331 ||||||||||||||||||||| ||||| ||||| Sbjct: 1515 cggcacgtccatggccacgccctacgtcgccggc 1548
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Minus Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||||||||||| || ||||| ||||||| || |||||||| ||||| Sbjct: 132349 cacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtc 132300
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 981 tgctccttgtccttggcatgcttctt 1006 |||||||||||||||||| ||||||| Sbjct: 109523 tgctccttgtccttggcaagcttctt 109498
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcgtcg 335 ||||||||| ||||| |||||||||||| |||| |||| Sbjct: 8771 cggcacgtcgatggcgacgccgcacgtcgccggtgtcg 8808
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 cgggccgaacgcggccagccccggcg 194 ||||||||||||||||||| |||||| Sbjct: 344238 cgggccgaacgcggccagcaccggcg 344263 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 cgggccgaacgcggccagccccggcg 194 ||||||||||||||||||| |||||| Sbjct: 5031329 cgggccgaacgcggccagcaccggcg 5031304
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 981 tgctccttgtccttggcatgcttctt 1006 |||||||||||||||||| ||||||| Sbjct: 28379591 tgctccttgtccttggcaagcttctt 28379566
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Minus Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||||||||||| || ||||| ||||||| || |||||||| ||||| Sbjct: 19871311 cacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtc 19871262
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 18367034 tcaagtccgccatcatgaccac 18367055
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 23879053 tcaagtccgccatcatgaccac 23879074
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 agccggcgccgatcgtcgccgc 156 |||||||||||||||||||||| Sbjct: 126348 agccggcgccgatcgtcgccgc 126369
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 561 gcgcgctgctcggcgaggcggc 582 |||||||||||||||||||||| Sbjct: 594488 gcgcgctgctcggcgaggcggc 594467 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 562 cgcgctgctcggcgaggcggc 582 ||||||||||||||||||||| Sbjct: 503529 cgcgctgctcggcgaggcggc 503549
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 81770 tcaagtccgccatcatgaccac 81791
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 28908 tcaagtccgccatcatgaccac 28929
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||||||||||| || ||||| ||||||| || |||||||| ||||| Sbjct: 114732 cacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtc 114781
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 catggacgaggagcaccggacg 457 |||||||||||||||||||||| Sbjct: 57599 catggacgaggagcaccggacg 57578
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 436 catggacgaggagcaccggacg 457 |||||||||||||||||||||| Sbjct: 156278 catggacgaggagcaccggacg 156257
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 agccggcgccgatcgtcgccgc 156 |||||||||||||||||||||| Sbjct: 45796 agccggcgccgatcgtcgccgc 45817
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 8664 tcaagtccgccatcatgaccac 8685
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 tcaagtccgccatcatgaccac 402 |||||||||||||||||||||| Sbjct: 118718 tcaagtccgccatcatgaccac 118739
>dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O14, full insert sequence Length = 2549 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 1528 gtgctcaagccggacatcatggcgcc 1553
>dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O13, full insert sequence Length = 2549 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 1528 gtgctcaagccggacatcatggcgcc 1553
>dbj|AK069238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B10, full insert sequence Length = 2542 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 356 cacccggactggtcgccgtcggcggtcaagtccgccatcatgaccacgtc 405 |||||||||||||| || ||||| ||||||| || |||||||| ||||| Sbjct: 1702 cacccggactggtcccccgcggcgatcaagtcggcgatcatgacgacgtc 1751
>dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A07, full insert sequence Length = 1704 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gtgctcaagcccgacatcatggcgcc 219 ||||||||||| |||||||||||||| Sbjct: 779 gtgctcaagccggacatcatggcgcc 804
>gb|AC090616.13| Homo sapiens chromosome 17, clone RP11-640N20, complete sequence Length = 160500 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 639 cggaggcgcagctgaactacc 659 ||||||||||||||||||||| Sbjct: 90507 cggaggcgcagctgaactacc 90527
>ref|XM_001228579.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10653) mRNA, complete cds Length = 6552 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cggcgtcgtggcactggtgaa 348 ||||||||||||||||||||| Sbjct: 1389 cggcgtcgtggcactggtgaa 1409
>ref|NM_001068088.1| Oryza sativa (japonica cultivar-group) Os08g0326700 (Os08g0326700) mRNA, complete cds Length = 2289 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 781 ggtggagccggaggcgctggagttc 805 ||||||||||| ||||||||||||| Sbjct: 2118 ggtggagccggcggcgctggagttc 2142
>ref|NM_001058632.1| Oryza sativa (japonica cultivar-group) Os04g0132500 (Os04g0132500) mRNA, complete cds Length = 4111 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 486 ccggactggtcgccgtcggcg 506
>ref|NM_001058631.1| Oryza sativa (japonica cultivar-group) Os04g0132400 (Os04g0132400) mRNA, complete cds Length = 3161 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 2646 ccggactggtcgccgtcggcg 2626
>ref|XR_021679.1| PREDICTED: Pan troglodytes similar to SH3GL1 (LOC747972), partial mRNA Length = 1248 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 639 cggaggcgcagctgaactacc 659 ||||||||||||||||||||| Sbjct: 665 cggaggcgcagctgaactacc 685
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ccacgtccagcaccgccgaca 419 ||||||||||||||||||||| Sbjct: 5984589 ccacgtccagcaccgccgaca 5984609
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 ggcgtgctcaagcccgacatc 211 ||||||||||||||||||||| Sbjct: 106386 ggcgtgctcaagcccgacatc 106366
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 gagtcgtacagctacaacgttgcct 296 ||||||| ||||||||||||||||| Sbjct: 55942 gagtcgttcagctacaacgttgcct 55966
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 cgcacccggactggtcgccgtcggcggtc 382 |||||| ||||||||||| |||||||||| Sbjct: 57676 cgcacctggactggtcgctgtcggcggtc 57704
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cgatggtgcctatcgatggca 269 ||||||||||||||||||||| Sbjct: 600208 cgatggtgcctatcgatggca 600228
>gb|AC127025.7| Homo sapiens chromosome 17, clone CTD-2646J6, complete sequence Length = 141061 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 639 cggaggcgcagctgaactacc 659 ||||||||||||||||||||| Sbjct: 46088 cggaggcgcagctgaactacc 46108
>gb|AE012003.1| Xanthomonas axonopodis pv. citri str. 306, section 381 of 469 of the complete genome Length = 12384 Score = 42.1 bits (21), Expect = 4.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 298 cggcacgtccatggccacgccgcacgtcaccggcgtcgtggcactggtg 346 |||||| || |||||| |||||||||| | ||||||||||| |||||| Sbjct: 3961 cggcacctcgatggcctcgccgcacgtggctggcgtcgtggcgctggtg 3913
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 781 ggtggagccggaggcgctggagttc 805 ||||||||||| ||||||||||||| Sbjct: 14359032 ggtggagccggcggcgctggagttc 14359056
>emb|AL133327.10| Human DNA sequence from clone RP11-77F13 on chromosome 10 Contains the 3' end of the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate synthase 2, the 3' end of a novel gene (FLJ90742) and a CpG island, complete sequence Length = 124628 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1045 tctttcagttcataataacac 1065 ||||||||||||||||||||| Sbjct: 33927 tctttcagttcataataacac 33947
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 562 cgcgctgctcggcgaggcggccatg 586 |||||||||||||||||| |||||| Sbjct: 166687 cgcgctgctcggcgaggccgccatg 166711
>emb|BX649258.11| Zebrafish DNA sequence from clone CH211-203F4 in linkage group 15, complete sequence Length = 148199 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 ggcggtcaagtccgccatcat 396 ||||||||||||||||||||| Sbjct: 93430 ggcggtcaagtccgccatcat 93410
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 781 ggtggagccggaggcgctggagttc 805 ||||||||||| ||||||||||||| Sbjct: 3315 ggtggagccggcggcgctggagttc 3339
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 781 ggtggagccggaggcgctggagttc 805 ||||||||||| ||||||||||||| Sbjct: 62112 ggtggagccggcggcgctggagttc 62136
>dbj|AK121779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093K02, full insert sequence Length = 4116 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 491 ccggactggtcgccgtcggcg 511
>dbj|AK112081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H09, full insert sequence Length = 3835 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 202 ccggactggtcgccgtcggcg 222
>dbj|AK110400.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-F08, full insert sequence Length = 3161 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 2646 ccggactggtcgccgtcggcg 2626
>gb|AF097939.1|AF097939 Homo sapiens EEN pseudogene, partial sequence Length = 4327 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 639 cggaggcgcagctgaactacc 659 ||||||||||||||||||||| Sbjct: 839 cggaggcgcagctgaactacc 859
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06, complete sequence Length = 126447 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccggactggtcgccgtcggcg 379 ||||||||||||||||||||| Sbjct: 38754 ccggactggtcgccgtcggcg 38774
>gb|AF029733.1|AF029733 Xanthobacter autotrophicus linear plasmid pXAU1 chloroacetaldehyde dehydrogenase (aldA) gene, complete cds Length = 2484 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 600 ggaacagcagcttgacgtgtgcggcggtg 628 |||||||||||||| ||||| |||||||| Sbjct: 2081 ggaacagcagcttgccgtgttcggcggtg 2053 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 137,512,730 Number of extensions: 7152322 Number of successful extensions: 141355 Number of sequences better than 10.0: 119 Number of HSP's gapped: 141339 Number of HSP's successfully gapped: 170 Length of query: 1143 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1120 Effective length of database: 18,503,978,556 Effective search space: 20724455982720 Effective search space used: 20724455982720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
