| Clone Name | FLbaf56a19 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g11310:12006.t01008:unspliced-genomic copper ion binding protein, putative, expressed| Length = 1586 Score = 188 bits (406), Expect(2) = 2e-68 Identities = 72/90 (80%), Positives = 80/90 (88%) Frame = +2 / +3 Query: 257 VFTYDPPNATTHAHSVYLMRNLADYQSCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFV 436 VF YDPPNATTHAHSVY+MRN ADYQSCN+KA KLVA V QG+G+G+EFVL+KRK HYFV Sbjct: 972 VFMYDPPNATTHAHSVYMMRNAADYQSCNLKAAKLVANVMQGAGSGYEFVLRKRKPHYFV 1151 Query: 437 CGERQGVHCTTGLMKFVVKPKSSVCRDD*P 526 CGER G+HCT G MKF+VKPKSS CRDD*P Sbjct: 1152 CGERGGIHCTMGQMKFIVKPKSSACRDD*P 1241 Score = 94.5 bits (200), Expect(2) = 2e-68 Identities = 34/39 (87%), Positives = 37/39 (94%) Frame = +2 / +3 Query: 140 PEACRAERFVVGDAARWTWGYNYTDWVIRKGPFFQDDTL 256 P A RAERFVVGDAARWTWGYNYTDWVI+KGPFFQ+D+L Sbjct: 189 PAAARAERFVVGDAARWTWGYNYTDWVIKKGPFFQNDSL 305 Score = 156 bits (335), Expect(2) = 3e-53 Identities = 69/93 (74%), Positives = 72/93 (77%) Frame = -3 / -2 Query: 534 RRGGQSSRQTELLGLTTNFMRPVVQWTPWRSPQTK*CILRFLSTNSKPAPEPCATPATSL 355 R GQSSRQ ELLGLT NF+ P+VQW P RSPQTK* LRF TNS P P PC T ATS Sbjct: 1249 RGPGQSSRQAELLGLTMNFIWPMVQWMPPRSPQTK*WGLRFRRTNS*PDPAPCITLATSF 1070 Query: 354 PALMLHDW*SARFRIRYTLCACVVAFGGSYVNT 256 AL LHDW*SA FRI YTLCACVVAFGGSY+NT Sbjct: 1069 AALRLHDW*SAAFRIMYTLCACVVAFGGSYMNT 971 Score = 76.7 bits (161), Expect(2) = 3e-53 Identities = 32/35 (91%), Positives = 33/35 (94%) Frame = -3 / -2 Query: 255 RVSSWKKGPFLMTQSV*LYPHVHRAASPTTNRSAR 151 R+S WKKGPFLMTQSV*L PHVHRAASPTTNRSAR Sbjct: 304 RLSFWKKGPFLMTQSV*L*PHVHRAASPTTNRSAR 200 Score = 54.2 bits (112), Expect(3) = 3e-21 Identities = 24/28 (85%), Positives = 24/28 (85%) Frame = +1 / +2 Query: 259 VHVRPAERDDARAQRVPDAEPRRLPVVQ 342 VHVRPAERDDARAQRV DAE LPVVQ Sbjct: 974 VHVRPAERDDARAQRVHDAERGGLPVVQ 1057 Score = 51.5 bits (106), Expect(3) = 3e-21 Identities = 25/45 (55%), Positives = 26/45 (57%) Frame = +1 / +2 Query: 391 GLRVRAQEAQDXXXXXXXXXXXXXHNRPHEVRRQAQELRLPRRLT 525 GLRVR EAQ H+ P EV RQAQELRLPRRLT Sbjct: 1106 GLRVRPPEAQAPLLRLRRARRHPLHHGPDEVHRQAQELRLPRRLT 1240 Score = 39.6 bits (80), Expect(3) = 3e-21 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +1 / +2 Query: 202 QLHRLGHQEGTLLPGRHP 255 QLHRLGHQEG LLP R P Sbjct: 251 QLHRLGHQEGPLLPKRQP 304 Score = 53.3 bits (110), Expect(2) = 1e-11 Identities = 24/45 (53%), Positives = 25/45 (55%) Frame = -2 / -1 Query: 391 RTRALRHAGHQLARLDVARLVVGEVPHQVHAXXXXXXXXXXXREH 257 R AL H GHQL RL+VARLVV VPH VHA EH Sbjct: 1106 RPGALHHVGHQLRRLEVARLVVRRVPHHVHAVRVRRRVRRVVHEH 972 Score = 36.3 bits (73), Expect(2) = 1e-11 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = -2 / -1 Query: 523 SVVAADGALGLDDELHEA 470 SVVAA GALGLDDELH A Sbjct: 1238 SVVAAGGALGLDDELHLA 1185
>LOC_Os01g73390:12001.t06620:unspliced-genomic conserved hypothetical protein| Length = 1703 Score = 35.9 bits (72), Expect(2) = 0.093 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 / +2 Query: 399 SKPAPEPCATPATSLPALMLHDW*SARFRIRYTLCACVVAFGGSYVNTRVSSWKKGP 229 S+P+ PCAT ATS W R R R T C+ ++ ++R S + GP Sbjct: 347 SRPSRRPCATTATSCCTPRTRRWRGRRSRRRPTPCSPARTSPPAHSSSRASPPRAGP 517 Score = 23.1 bits (44), Expect(2) = 0.093 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -3 / +2 Query: 195 HVHRAASPTTNR 160 HVH AA+PT+ R Sbjct: 1181 HVHEAAAPTSIR 1216
>LOC_Os07g02200:12007.t00112:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 983 Score = 37.7 bits (76), Expect = 0.10 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 / +2 Query: 140 PEACRAERFVVGDAARWTWGYNYTDWVIRKGPFFQDDTL 256 P A A + VGD W +YT WV + PF++ D L Sbjct: 161 PAAAVATNYTVGDEKGWNPDVDYTAWVKKHRPFYKGDWL 277
>LOC_Os02g22080:12002.t01996:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 3826 Score = 35.9 bits (72), Expect = 0.37 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +1 / +2 Query: 223 QEGTLLPGRHPCVHVRPAERDDARAQRVPDAEPRRL 330 +E L P RHP RP R D R QR+ + PRRL Sbjct: 20 RESRLPPYRHPQCDSRPRCRPDHRPQRLHNRRPRRL 127
>LOC_Os02g52180:12002.t04799:unspliced-genomic uclacyanin-2 precursor, putative, expressed| Length = 1242 Score = 33.1 bits (66), Expect(2) = 0.42 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 / +2 Query: 155 AERFVVGDAARWTWGYNYTDW 217 A + VGDA+ WT G +YT W Sbjct: 251 ATSYTVGDASGWTIGVDYTSW 313 Score = 23.1 bits (44), Expect(2) = 0.42 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +1 / +1 Query: 463 HNRPHEVRRQAQELRLPRRL 522 H R H RR + R PRR+ Sbjct: 733 HRRQHRPRRIRRPRRRPRRI 792
>LOC_Os07g44340:12007.t04074:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3130 Score = 35.0 bits (70), Expect = 0.70 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +2 / +3 Query: 641 NHLLYLLLVSYHNCCIHMCRVV 706 +HL+ LL +++H C H+CRV+ Sbjct: 2457 HHLVILLCITFHGCLNHICRVI 2522
>LOC_Os06g11490:12006.t01026:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 1447 Score = 32.2 bits (64), Expect(2) = 0.88 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 / +2 Query: 146 ACRAERFVVGDAARWTWGYNYTDWVIRK 229 A A ++ VGD + W G +YT W K Sbjct: 191 AAAATKYTVGDTSGWAMGADYTTWASDK 274 Score = 23.1 bits (44), Expect(2) = 0.88 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +3 / +2 Query: 633 LSQIICYTCCL 665 L Q CY CCL Sbjct: 614 LHQFTCYICCL 646
>LOC_Os09g36940:12009.t03170:unspliced-genomic blue copper binding protein, putative, expressed| Length = 791 Score = 27.2 bits (53), Expect(2) = 1.2 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 / +2 Query: 629 YSVSNHLLYLLLVSYHNCCIHMCRV 703 ++ HL+YL L S CC +C V Sbjct: 308 FAHDQHLVYLWLDSIS*CCCELCSV 382 Score = 26.7 bits (52), Expect(2) = 1.2 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 / +3 Query: 155 AERFVVGDAARWTWGYNYTDW 217 A + VGD+ WT G +Y W Sbjct: 180 ATEYTVGDSEGWTIGPSYLAW 242
>LOC_Os09g29390:12009.t02617:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 1330 Score = 34.1 bits (68), Expect = 1.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 / +3 Query: 155 AERFVVGDAARWTWGYNYTDW 217 A R+ VGD WT G NY +W Sbjct: 177 ATRYTVGDGEGWTTGVNYNNW 239
>LOC_Os08g20180:12008.t01836:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5279 Score = 34.1 bits (68), Expect = 1.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 / +3 Query: 629 YSVSNHLLYLLLVSYHNCCIHMCRVV 706 Y +HL+ LL ++ H C H+CRV+ Sbjct: 2505 YIQCHHLVILLCITCHGCLNHLCRVI 2582
>LOC_Os03g20840:12003.t01840:unspliced-genomic disease resistance RPP13-like protein 1, putative, expressed| Length = 3977 Score = 34.1 bits (68), Expect = 1.3 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +2 / +2 Query: 638 SNHLLYLLLVSYHNCCIHMCRVV*LCCLYAIYH 736 +N +L L +SYH+ H+ ++ LCCL+ + H Sbjct: 1742 NNRILPSLQISYHHLPYHLKQLFTLCCLFPVGH 1840
>LOC_Os12g12934:12012.t01161:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 5219 Score = 33.6 bits (67), Expect = 1.8 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +1 / +3 Query: 244 GRHPCVHVRPAERDDARAQRVPDAEPRRL 330 G P H RPA R R+PDA PRRL Sbjct: 4140 GHPPRRHQRPAGEPLRRPHRLPDAHPRRL 4226
>LOC_Os03g55120:12003.t04777:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 1120 Score = 33.6 bits (67), Expect = 1.8 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 / +1 Query: 188 WTWGYNYTDWVIRKGPFFQDDTLVFTYDPP 277 W NY+DW + GPF++ D L PP Sbjct: 241 WKPNTNYSDWPAQHGPFYKGDWLGTLPSPP 330
>LOC_Os12g24220:12012.t02151:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5083 Score = 33.1 bits (66), Expect = 2.5 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -3 / +2 Query: 399 SKPAPEPCATPATSLPAL 346 SKP+P PCATP+ PAL Sbjct: 68 SKPSPTPCATPSPPPPAL 121
>LOC_Os04g12610:12004.t01085:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6080 Score = 33.1 bits (66), Expect = 2.5 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +2 / +2 Query: 641 NHLLYLLLVSYHNCCIHMCRVV 706 +HL+ LL ++ H C H+CRV+ Sbjct: 2159 HHLVILLCITCHGCLNHLCRVI 2224
>LOC_Os03g50230:12003.t04365:unspliced-genomic protein kinase-like protein, putative, expressed| Length = 5336 Score = 33.1 bits (66), Expect = 2.5 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 / +2 Query: 633 LSQIICYTCCL*VITIVAFICVVLCNCVACTLF 731 +S + Y L +IT ++ IC+ LC +ACT F Sbjct: 665 MSAFVTYQRSLLLITFISNICLSLCG*MACTFF 763
>LOC_Os11g22404:12011.t01911:unspliced-genomic catalytic/ protein phosphatase type 2C, putative, expressed| Length = 6899 Score = 32.7 bits (65), Expect = 3.4 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 / -2 Query: 654 TCCL*VITIVAFICVVLCNCVACTLFIITVACD 752 TCCL +V+ I + LC C CTL+ + D Sbjct: 2473 TCCLYSPLMVSTILLSLCKCYCCTLWCLVFEKD 2375
>LOC_Os08g38050:12008.t03541:unspliced-genomic expressed protein| Length = 3108 Score = 32.7 bits (65), Expect = 3.4 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -3 / +3 Query: 288 VVAFGGSYVNTRVSSWKKGPFLMTQSV*LYPHVHRAASPTTNRSAR 151 + A S V+ V SWK P L P VHRA+S T S+R Sbjct: 1098 LAAVVSSLVDILVGSWKLAPPLQNGRSVKMPTVHRASSSTLRLSSR 1235
>LOC_Os06g30340:12006.t02738:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1032 Score = 32.7 bits (65), Expect = 3.4 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +2 / +2 Query: 644 HLLYLLLVSYHNCCIHMCRVV 706 HL+ LL ++ H C H+CRV+ Sbjct: 491 HLVILLCITCHGCLNHLCRVI 553
>LOC_Os01g25460:12001.t02262:unspliced-genomic extensin-like protein, putative, expressed| Length = 1844 Score = 26.3 bits (51), Expect(2) = 3.4 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 / +3 Query: 202 QLHRLGHQEGTLLPGRHPCVHVRPAER 282 Q+HR+GH+ P R H RP R Sbjct: 783 QVHRVGHRPRQQRPRRLHPAHHRPGRR 863 Score = 23.5 bits (45), Expect(2) = 3.4 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 / +3 Query: 280 RDDARAQRVPDAEPRRLP 333 R AR R+P +P RLP Sbjct: 858 RRHARPVRLPQQQPHRLP 911
>LOC_Os12g27790:12012.t02490:unspliced-genomic F-box domain containing protein| Length = 1793 Score = 29.9 bits (59), Expect(2) = 3.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 / -1 Query: 453 PWRSPQTK*CILRFLSTNSKPAPE 382 PWR P TK LR + KP+PE Sbjct: 203 PWRRPGTKPSALRRRRSRRKPSPE 132 Score = 23.5 bits (45), Expect(2) = 3.5 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -2 / -3 Query: 538 CEKGRSVVAADGALGLDDEL 479 C G +V AADG + +DE+ Sbjct: 927 CSPGLAVAAADGDVDGEDEV 868
>LOC_Os08g14180:12008.t01294:unspliced-genomic flavonol 4-sulfotransferase, putative, expressed| Length = 4598 Score = 32.2 bits (64), Expect = 4.7 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 / -1 Query: 561 TPWNHRGAVRRGGQSSRQTELLGLTTNFMRPVVQWTPWRSPQ 436 T W HRG R GQ RQ++ G T+ R V R P+ Sbjct: 1829 TRWWHRGREYRRGQRRRQSQCRG*TSGVRRRVASAPSQRHPR 1704
>LOC_Os06g11700:12006.t01047:unspliced-genomic phi-1-like phosphate-induced protein, putative, expressed| Length = 1265 Score = 32.2 bits (64), Expect = 4.7 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = +1 / +2 Query: 253 PCVHVRPAERDDARAQRVPDAEPRRLPVVQ 342 P H ERDDA + V RRLPVVQ Sbjct: 275 PLPHGHATERDDALGRAVVGRHRRRLPVVQ 364
>LOC_Os05g06980:12005.t00587:unspliced-genomic expressed protein| Length = 10885 Score = 32.2 bits (64), Expect = 4.7 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 / +3 Query: 629 YSVSNHLLYLLLVSYHNCCIHMCRVV*LCCLYAIYH 736 Y SN L+Y L Y C H V+ LCC +H Sbjct: 7326 YLTSNVLIY*LFKFYVPFCFHCQEVLSLCCFLFFWH 7433
>LOC_Os01g43844:12001.t03897:unspliced-genomic cytochrome P450 72A1, putative, expressed| Length = 4288 Score = 32.2 bits (64), Expect = 4.7 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -3 / -3 Query: 531 RGGQSSRQTELLGLTTNFMRPVVQWTPWRSP 439 R +SS + T RP WTPWRSP Sbjct: 3851 RAARSSGRCRSSAPTRTGRRPAPPWTPWRSP 3759
>LOC_Os09g25540:12009.t02233:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 3592 Score = 27.2 bits (53), Expect(2) = 4.8 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 / +1 Query: 696 VVLCNCVACTLFIITVAC 749 VV+C C A F++T+ C Sbjct: 2077 VVMCICAAVLAFVLTILC 2130 Score = 26.7 bits (52), Expect(2) = 4.8 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / +3 Query: 463 HNRPHEVRRQAQELRLPRRL 522 H RP V R+ +E R PRRL Sbjct: 1794 HRRPPVVARRPREHRAPRRL 1853
>LOC_Os10g35050:12010.t02800:unspliced-genomic aquaporin TIP3.1, putative, expressed| Length = 1430 Score = 24.4 bits (47), Expect(3) = 5.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 / +3 Query: 265 VRPAERDDARAQRVPDAEPRRLP 333 +R +R +ARA+R A RRLP Sbjct: 855 LRDGDRPEARARRDHRAARRRLP 923 Score = 24.0 bits (46), Expect(3) = 5.3 Identities = 5/11 (45%), Positives = 10/11 (90%) Frame = +3 / +1 Query: 681 VAFICVVLCNC 713 ++++CVV+C C Sbjct: 1192 ISYVCVVVCEC 1224 Score = 21.7 bits (41), Expect(3) = 5.3 Identities = 6/8 (75%), Positives = 7/8 (87%) Frame = +2 / +2 Query: 8 KPDQPGHH 31 +P QPGHH Sbjct: 536 RPRQPGHH 559
>LOC_Os05g43950:12005.t03884:unspliced-genomic expressed protein| Length = 4122 Score = 31.8 bits (63), Expect = 6.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 / +3 Query: 651 YTCCL*VITIVAFICVVLCNCVAC 722 Y C L VI I FIC+V+ C +C Sbjct: 2250 YACMLSVICI*YFICLVVVTCTSC 2321
>LOC_Os05g03140:12005.t00211:unspliced-genomic senescence-associated protein, putative, expressed| Length = 4251 Score = 31.8 bits (63), Expect = 6.4 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -3 / +1 Query: 399 SKPAPEPCATPATSLPA 349 S P P PC+TPATS P+ Sbjct: 715 SSPRPPPCSTPATSPPS 765
>LOC_Os04g46130:12004.t04145:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 1515 Score = 31.8 bits (63), Expect = 6.4 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +2 / +1 Query: 155 AERFVVGDAARWTWGYNYTDW 217 A+ + VGD++ WT G +YT W Sbjct: 148 AKDYTVGDSSGWTTGVDYTAW 210
>LOC_Os06g06750:12006.t00560:unspliced-genomic MADS-box transcription factor 5, putative, expressed| Length = 6615 Score = 25.8 bits (50), Expect(2) = 7.5 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 / -1 Query: 428 YFVCGERQGVHCTTGLMKF 484 YF+ E++GVHC L KF Sbjct: 2487 YFLGREKEGVHCD*ELGKF 2431 Score = 22.6 bits (43), Expect(2) = 7.5 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +2 / -1 Query: 401 FVLKKRKMHYFVCG 442 FV ++HYF+CG Sbjct: 2547 FVF*MLELHYFLCG 2506
>LOC_Os08g41690:12008.t03898:unspliced-genomic expressed protein| Length = 3083 Score = 28.1 bits (55), Expect(2) = 7.5 Identities = 7/22 (31%), Positives = 15/22 (68%) Frame = +2 / +2 Query: 452 GVHCTTGLMKFVVKPKSSVCRD 517 G+HC+ GL++ + + + +C D Sbjct: 1652 GLHCSVGLLESITQTSNCICYD 1717 Score = 24.9 bits (48), Expect(2) = 7.5 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 / +1 Query: 220 HQEGTLLPGRHPCVHVRPAERDDARA 297 H TLL G P H+RP R A++ Sbjct: 223 HHRDTLLHGGLPRRHLRPHRRPGAQS 300
>LOC_Os12g14764:12012.t01336:unspliced-genomic hypothetical protein| Length = 3431 Score = 31.3 bits (62), Expect = 8.8 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = +2 / +3 Query: 200 YNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLADYQSC 340 Y+ ++ ++ +G FFQ DT +F + P H+ A + SC Sbjct: 1434 YDESELLLIRGQFFQGDTAIFRHSKPLYNQDTHNRQNTHAEAVFSSC 1574
>LOC_Os11g23230:12011.t01992:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2973 Score = 31.3 bits (62), Expect = 8.8 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +2 / +2 Query: 641 NHLLYLLLVSYHNCCIHMCRVV 706 +HL+ L ++ H C H+CRV+ Sbjct: 2531 HHLVILFCITCHGCLNHLCRVI 2596
>LOC_Os09g21470:12009.t01881:unspliced-genomic expressed protein| Length = 2684 Score = 31.3 bits (62), Expect = 8.8 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 / +3 Query: 654 TCCL*VITIVAFICVVLCNCVACTLFIITVA 746 TCC+* + + + +L NC AC I+ +A Sbjct: 2280 TCCI*SLCALR*LLTILFNCAACAYEIVALA 2372
>LOC_Os08g37660:12008.t03502:unspliced-genomic blue copper protein precursor, putative, expressed| Length = 1264 Score = 31.3 bits (62), Expect = 8.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 / +1 Query: 164 FVVGDAARWTWGYNYTDW 217 F+VGDA W G +YT W Sbjct: 379 FIVGDAQGWNTGVDYTAW 432
>LOC_Os08g35540:12008.t03294:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1394 Score = 31.3 bits (62), Expect = 8.8 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -3 / +2 Query: 399 SKPAPEPCATPATSLPAL 346 SKP+P PC TP+ PAL Sbjct: 68 SKPSPTPCVTPSPPPPAL 121
>LOC_Os07g01820:12007.t00079:unspliced-genomic MADS-box transcription factor 15, putative, expressed| Length = 6482 Score = 31.3 bits (62), Expect = 8.8 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 / -1 Query: 414 FLSTNSKPAPEPCATPATSLPALM 343 ++ N P+ EPC+ PA + PALM Sbjct: 5123 YIFDNLLPSAEPCSPPAVTSPALM 5052 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 221,653,170 Number of extensions: 3065304 Number of successful extensions: 18286 Number of sequences better than 10.0: 38 Length of query: 271 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 222 Effective length of database: 52,856,264 Effective search space: 11734090608 Effective search space used: 11734090608 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)