ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56a19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q41001:BCP_PEA Blue copper protein precursor - Pisum sativum (Ga... 49 2e-05
2Q39131:LAML_ARATH Lamin-like protein precursor - Arabidopsis tha... 37 0.093
3P93329:NO20_MEDTR Early nodulin 20 precursor - Medicago truncatu... 36 0.16
4P60496:BABL_LILLO Chemocyanin precursor - Lilium longiflorum (Tr... 35 0.35
5Q505D9:TRI67_MOUSE Tripartite motif-containing protein 67 - Mus ... 33 1.0
6Q6ZTA4:TRI67_HUMAN Tripartite motif-containing protein 67 - Homo... 33 1.0
7Q9T076:ENL2_ARATH Early nodulin-like protein 2 precursor - Arabi... 33 1.3
8P29602:CPC_CUCSA Cucumber peeling cupredoxin - Cucumis sativus (... 33 1.8
9Q91YE5:BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain pr... 32 3.9

>Q41001:BCP_PEA Blue copper protein precursor - Pisum sativum (Garden pea)|
          Length = 189
 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 38/114 (33%), Positives = 57/114 (50%)
 Frame = +2

Query: 164 FVVGDAARWTWGYNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLADYQSCN 343
           + VGD + W  G +Y+ W   K  F   D+LVF Y        AH+V  ++  +DY+SC 
Sbjct: 27  YTVGDTSGWVIGGDYSTWASDK-TFAVGDSLVFNYG-----AGAHTVDEVKE-SDYKSCT 79

Query: 344 IKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTGLMKFVVKPKSS 505
             +G  ++  + G+       LKK   HYF+CG       +TG MK  +K K+S
Sbjct: 80  --SGNSISTDSTGATT---IPLKKAGKHYFICGVPGH---STGGMKLSIKVKAS 125



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>Q39131:LAML_ARATH Lamin-like protein precursor - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 172

 Score = 37.0 bits (84), Expect = 0.093
 Identities = 33/113 (29%), Positives = 51/113 (45%)
 Frame = +2

Query: 155 AERFVVGDAARWTWGYNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLADYQ 334
           A+++ VG+   W    NYT W   K  F+  D L F +D      + H++ L  N  DY+
Sbjct: 26  AKKYTVGENKFWNPNINYTIWAQGK-HFYLGDWLYFVFD-----RNQHNI-LEVNKTDYE 78

Query: 335 SCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTGLMKFVVK 493
            C   A   +    +  GAG + V   +  HY++   + G +   G MK  VK
Sbjct: 79  GC--IADHPIRNWTR--GAGRDIVTLNQTKHYYLLDGKGGCY---GGMKLSVK 124



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>P93329:NO20_MEDTR Early nodulin 20 precursor - Medicago truncatula (Barrel medic)|
          Length = 268

 Score = 36.2 bits (82), Expect = 0.16
 Identities = 32/112 (28%), Positives = 43/112 (38%)
 Frame = +2

Query: 194 WGYNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLADYQSCNIKAGKLVAGV 373
           W  NY         F   DT+ F Y+  N T   H V       DY  C I+   +    
Sbjct: 49  WASNYQ--------FIVGDTITFQYN--NKTESVHEV----EEEDYDRCGIRGEHV---- 90

Query: 374 AQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTGLMKFVVKPKSSVCRDD*PP 529
                     VLKK  +H+F+ G+++  HC  GL   VV   + V     PP
Sbjct: 91  -DHYDGNTMVVLKKTGIHHFISGKKR--HCRLGLKLAVVVMVAPVLSSPPPP 139



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>P60496:BABL_LILLO Chemocyanin precursor - Lilium longiflorum (Trumpet lily)|
          Length = 126

 Score = 35.0 bits (79), Expect = 0.35
 Identities = 32/111 (28%), Positives = 45/111 (40%)
 Frame = +2

Query: 143 EACRAERFVVGDAARWTWGYNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNL 322
           E   +  + VGD   WT+G   + W   K  F   D LVF Y+P       H+V  +   
Sbjct: 26  EVAESVVYTVGDGGGWTFG--TSGWPAGK-TFRAGDVLVFKYNPA-----VHNVVSV-PA 76

Query: 323 ADYQSCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTGL 475
             Y+SC    G  V        +G + +   R  +YF+C      HC  GL
Sbjct: 77  GGYKSCTASPGSRV------FKSGDDRITLSRGTNYFICSVPG--HCQGGL 119



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>Q505D9:TRI67_MOUSE Tripartite motif-containing protein 67 - Mus musculus (Mouse)|
          Length = 768

 Score = 33.5 bits (75), Expect = 1.0
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 293 AHSVYLMRNLADYQSCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQG 454
           A ++Y+  N + +  CN    +   GV +G+  G    L K  + +F+ G++QG
Sbjct: 672 AWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQG 725



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>Q6ZTA4:TRI67_HUMAN Tripartite motif-containing protein 67 - Homo sapiens (Human)|
          Length = 756

 Score = 33.5 bits (75), Expect = 1.0
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 293 AHSVYLMRNLADYQSCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQG 454
           A ++Y+  N + +  CN    +   GV +G+  G    L K  + +F+ G++QG
Sbjct: 687 AWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQG 740



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>Q9T076:ENL2_ARATH Early nodulin-like protein 2 precursor - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 349

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +2

Query: 155 AERFVVGDAARWTWG--YNYTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLAD 328
           A +F VG +  W      NY  W   K  F   DTL F+Y        A SV L  N AD
Sbjct: 28  ARKFNVGGSGAWVTNPPENYESWS-GKNRFLVHDTLYFSY-----AKGADSV-LEVNKAD 80

Query: 329 YQSCNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTG 472
           Y +CN K    +  V  G     E  L +    YF+ G     +C  G
Sbjct: 81  YDACNTK--NPIKRVDDGDS---EISLDRYGPFYFISGNED--NCKKG 121



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>P29602:CPC_CUCSA Cucumber peeling cupredoxin - Cucumis sativus (Cucumber)|
          Length = 137

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
 Frame = +2

Query: 167 VVGDAARWTWGYN---YTDWVIRKGPFFQDDTLVFTYDPPNATTHAHSVYLMRNLADYQS 337
           +VGD   W+   +   Y+ W   K  F   D+L F + P NA    H+V+ M     + +
Sbjct: 6   IVGDNTGWSVPSSPNFYSQWAAGK-TFRVGDSLQFNF-PANA----HNVHEMETKQSFDA 59

Query: 338 CNIKAGKLVAGVAQGSGAGFEFVLKKRKMHYFVCGERQGVHCTTG 472
           CN           + +    E  L +  MHYFVC    G HC+ G
Sbjct: 60  CNFVNSD---NDVERTSPVIE-RLDELGMHYFVC--TVGTHCSNG 98



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>Q91YE5:BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A - Mus|
           musculus (Mouse)
          Length = 1850

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = -3

Query: 516 SRQTELLGLTTNFMRPVVQWTPWRSPQTK*CILRFLSTNSKPAPEPCATPATSLPA 349
           S Q E+   ++NF RP+ +  P + P          ST   PA  P A+PA SL A
Sbjct: 353 SEQEEIETQSSNFQRPLTEPAPDQPP----------STQLHPAVSPTASPAASLTA 398


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 96,514,246
Number of extensions: 1831875
Number of successful extensions: 5014
Number of sequences better than 10.0: 9
Number of HSP's gapped: 5012
Number of HSP's successfully gapped: 9
Length of query: 271
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 160
Effective length of database: 70,239,694
Effective search space: 11238351040
Effective search space used: 11238351040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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