ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56a19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063682.1| Oryza sativa (japonica cultivar-group) Os06g0216700 (Os06g0216700) mRNA, complete cds Length = 912 Score = 396 bits (200), Expect = e-107 Identities = 326/368 (88%) Strand = Plus / Plus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 205 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 264 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttgtgttcacgtacgacccgccg 277 ||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct: 265 gtcatcaagaagggccccttcttccaaaacgacagccttgtgttcatgtacgacccgccg 324 Query: 278 aacgcgacgacgcacgcgcacagcgtgtacctgatgcggaacctcgccgactaccagtcg 337 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 325 aacgcgacgacgcacgcgcacagcgtgtacatgatgcggaacgcggcggactaccagtcg 384 Query: 338 tgcaacatcaaggcgggcaagctggtggccggcgtggcgcagggctctggtgcgggcttc 397 |||||| ||||||||| |||||||||||| |||| ||||||| | || |||||| | Sbjct: 385 tgcaacctcaaggcggcgaagctggtggccaacgtgatgcagggcgccgggtcgggctac 444 Query: 398 gagttcgtgctcaagaagcgcaagatgcactacttcgtctgcggcgagcgccaaggcgtc 457 |||||||| ||| |||||||||| |||||||||||||||||||||||| ||| || Sbjct: 445 gagttcgtcctccggaagcgcaagccccactacttcgtctgcggcgagcgcggcggcatc 504 Query: 458 cactgcacaaccggcctcatgaagttcgtcgtcaagcccaagagctccgtctgccgcgac 517 |||||||| | |||| ||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 505 cactgcaccatgggccagatgaagttcatcgtcaagcccaagagctccgcctgccgcgac 564 Query: 518 gactgacc 525 |||||||| Sbjct: 565 gactgacc 572
>dbj|AK101397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037B14, full insert sequence Length = 913 Score = 396 bits (200), Expect = e-107 Identities = 326/368 (88%) Strand = Plus / Plus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 206 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 265 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttgtgttcacgtacgacccgccg 277 ||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct: 266 gtcatcaagaagggccccttcttccaaaacgacagccttgtgttcatgtacgacccgccg 325 Query: 278 aacgcgacgacgcacgcgcacagcgtgtacctgatgcggaacctcgccgactaccagtcg 337 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 326 aacgcgacgacgcacgcgcacagcgtgtacatgatgcggaacgcggcggactaccagtcg 385 Query: 338 tgcaacatcaaggcgggcaagctggtggccggcgtggcgcagggctctggtgcgggcttc 397 |||||| ||||||||| |||||||||||| |||| ||||||| | || |||||| | Sbjct: 386 tgcaacctcaaggcggcgaagctggtggccaacgtgatgcagggcgccgggtcgggctac 445 Query: 398 gagttcgtgctcaagaagcgcaagatgcactacttcgtctgcggcgagcgccaaggcgtc 457 |||||||| ||| |||||||||| |||||||||||||||||||||||| ||| || Sbjct: 446 gagttcgtcctccggaagcgcaagccccactacttcgtctgcggcgagcgcggcggcatc 505 Query: 458 cactgcacaaccggcctcatgaagttcgtcgtcaagcccaagagctccgtctgccgcgac 517 |||||||| | |||| ||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 506 cactgcaccatgggccagatgaagttcatcgtcaagcccaagagctccgcctgccgcgac 565 Query: 518 gactgacc 525 |||||||| Sbjct: 566 gactgacc 573
>dbj|AK058410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C08, full insert sequence Length = 852 Score = 396 bits (200), Expect = e-107 Identities = 326/368 (88%) Strand = Plus / Plus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 207 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 266 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttgtgttcacgtacgacccgccg 277 ||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct: 267 gtcatcaagaagggccccttcttccaaaacgacagccttgtgttcatgtacgacccgccg 326 Query: 278 aacgcgacgacgcacgcgcacagcgtgtacctgatgcggaacctcgccgactaccagtcg 337 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 327 aacgcgacgacgcacgcgcacagcgtgtacatgatgcggaacgcggcggactaccagtcg 386 Query: 338 tgcaacatcaaggcgggcaagctggtggccggcgtggcgcagggctctggtgcgggcttc 397 |||||| ||||||||| |||||||||||| |||| ||||||| | || |||||| | Sbjct: 387 tgcaacctcaaggcggcgaagctggtggccaacgtgatgcagggcgccgggtcgggctac 446 Query: 398 gagttcgtgctcaagaagcgcaagatgcactacttcgtctgcggcgagcgccaaggcgtc 457 |||||||| ||| |||||||||| |||||||||||||||||||||||| ||| || Sbjct: 447 gagttcgtcctccggaagcgcaagccccactacttcgtctgcggcgagcgcggcggcatc 506 Query: 458 cactgcacaaccggcctcatgaagttcgtcgtcaagcccaagagctccgtctgccgcgac 517 |||||||| | |||| ||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 507 cactgcaccatgggccagatgaagttcatcgtcaagcccaagagctccgcctgccgcgac 566 Query: 518 gactgacc 525 |||||||| Sbjct: 567 gactgacc 574
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 256 bits (129), Expect = 1e-64 Identities = 234/269 (86%) Strand = Plus / Minus Query: 257 gtgttcacgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacctgatgcgg 316 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5941830 gtgttcatgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacatgatgcgg 5941771 Query: 317 aacctcgccgactaccagtcgtgcaacatcaaggcgggcaagctggtggccggcgtggcg 376 ||| || |||||||||||||||||| ||||||||| |||||||||||| |||| | Sbjct: 5941770 aacgcggcggactaccagtcgtgcaacctcaaggcggcgaagctggtggccaacgtgatg 5941711 Query: 377 cagggctctggtgcgggcttcgagttcgtgctcaagaagcgcaagatgcactacttcgtc 436 |||||| | || |||||| ||||||||| ||| |||||||||| |||||||||||| Sbjct: 5941710 cagggcgccgggtcgggctacgagttcgtcctccggaagcgcaagccccactacttcgtc 5941651 Query: 437 tgcggcgagcgccaaggcgtccactgcacaaccggcctcatgaagttcgtcgtcaagccc 496 |||||||||||| ||| |||||||||| | |||| ||||||||| ||||||||||| Sbjct: 5941650 tgcggcgagcgcggcggcatccactgcaccatgggccagatgaagttcatcgtcaagccc 5941591 Query: 497 aagagctccgtctgccgcgacgactgacc 525 |||||||||| |||||||||||||||||| Sbjct: 5941590 aagagctccgcctgccgcgacgactgacc 5941562 Score = 143 bits (72), Expect = 1e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5942595 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 5942536 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttg 257 ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 5942535 gtcatcaagaagggccccttcttccaaaacgacagccttg 5942496
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 256 bits (129), Expect = 1e-64 Identities = 234/269 (86%) Strand = Plus / Minus Query: 257 gtgttcacgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacctgatgcgg 316 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 142605 gtgttcatgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacatgatgcgg 142546 Query: 317 aacctcgccgactaccagtcgtgcaacatcaaggcgggcaagctggtggccggcgtggcg 376 ||| || |||||||||||||||||| ||||||||| |||||||||||| |||| | Sbjct: 142545 aacgcggcggactaccagtcgtgcaacctcaaggcggcgaagctggtggccaacgtgatg 142486 Query: 377 cagggctctggtgcgggcttcgagttcgtgctcaagaagcgcaagatgcactacttcgtc 436 |||||| | || |||||| ||||||||| ||| |||||||||| |||||||||||| Sbjct: 142485 cagggcgccgggtcgggctacgagttcgtcctccggaagcgcaagccccactacttcgtc 142426 Query: 437 tgcggcgagcgccaaggcgtccactgcacaaccggcctcatgaagttcgtcgtcaagccc 496 |||||||||||| ||| |||||||||| | |||| ||||||||| ||||||||||| Sbjct: 142425 tgcggcgagcgcggcggcatccactgcaccatgggccagatgaagttcatcgtcaagccc 142366 Query: 497 aagagctccgtctgccgcgacgactgacc 525 |||||||||| |||||||||||||||||| Sbjct: 142365 aagagctccgcctgccgcgacgactgacc 142337 Score = 143 bits (72), Expect = 1e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 143370 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 143311 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttg 257 ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 143310 gtcatcaagaagggccccttcttccaaaacgacagccttg 143271
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 256 bits (129), Expect = 1e-64 Identities = 234/269 (86%) Strand = Plus / Minus Query: 257 gtgttcacgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacctgatgcgg 316 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 63482 gtgttcatgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacatgatgcgg 63423 Query: 317 aacctcgccgactaccagtcgtgcaacatcaaggcgggcaagctggtggccggcgtggcg 376 ||| || |||||||||||||||||| ||||||||| |||||||||||| |||| | Sbjct: 63422 aacgcggcggactaccagtcgtgcaacctcaaggcggcgaagctggtggccaacgtgatg 63363 Query: 377 cagggctctggtgcgggcttcgagttcgtgctcaagaagcgcaagatgcactacttcgtc 436 |||||| | || |||||| ||||||||| ||| |||||||||| |||||||||||| Sbjct: 63362 cagggcgccgggtcgggctacgagttcgtcctccggaagcgcaagccccactacttcgtc 63303 Query: 437 tgcggcgagcgccaaggcgtccactgcacaaccggcctcatgaagttcgtcgtcaagccc 496 |||||||||||| ||| |||||||||| | |||| ||||||||| ||||||||||| Sbjct: 63302 tgcggcgagcgcggcggcatccactgcaccatgggccagatgaagttcatcgtcaagccc 63243 Query: 497 aagagctccgtctgccgcgacgactgacc 525 |||||||||| |||||||||||||||||| Sbjct: 63242 aagagctccgcctgccgcgacgactgacc 63214 Score = 143 bits (72), Expect = 1e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 158 gagcggttcgtcgtcggcgacgcggcgcggtggacgtgggggtacaactacaccgactgg 217 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 64247 gagcggttcgttgtcggcgacgcggcgcggtggacgtggggttacaactacaccgactgg 64188 Query: 218 gtcatcaggaagggacccttcttccaggacgacacccttg 257 ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 64187 gtcatcaagaagggccccttcttccaaaacgacagccttg 64148
>gb|AY107041.1| Zea mays PCO101548 mRNA sequence Length = 589 Score = 242 bits (122), Expect = 2e-60 Identities = 232/268 (86%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 257 gtgttcacgtacgacccgccgaacgcgacgacgcacgcgcacagcgtgtacctgatgcgg 316 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 13 gtgttcatgtacgacccgccgaacgcgacggtgcacgcgcacagcgtgtacctgatgcgc 72 Query: 317 aacctcgccgactaccagtcgtgcaacatcaaggcgggcaagctggtggccggcgtggcg 376 | | ||| |||||||||||||||||| ||||||||| ||||||||||||| |||| || Sbjct: 73 accgccgcggactaccagtcgtgcaacctcaaggcggccaagctggtggccagcgtcacg 132 Query: 377 cagggctctggtgcgggcttcgagttcgtgctcaagaagcgcaagatgcactacttcgtc 436 |||||| | || | |||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 133 cagggcgccggctccggcttcgagttcgtgctccggaagcgcaaca-gcactacttcgtg 191 Query: 437 tgcggcgagcgccaaggcgtccactgcacaaccggcctcatgaagttcgtcgtcaagccc 496 |||||||||||| | |||||||||| | |||| ||||||||||||||||||||| Sbjct: 192 tgcggcgagcgcggcnncatccactgcaccatgggccagatgaagttcgtcgtcaagccc 251 Query: 497 aagagctccgtctgccgcgacgactgac 524 |||||||| | ||||||||||||||||| Sbjct: 252 aagagctctgcctgccgcgacgactgac 279
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 85 ggcgagggtgggggcaacggcggcgg 110 |||||||||||||||||||||||||| Sbjct: 14726225 ggcgagggtgggggcaacggcggcgg 14726200
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 85 ggcgagggtgggggcaacggcggcgg 110 |||||||||||||||||||||||||| Sbjct: 11614 ggcgagggtgggggcaacggcggcgg 11589
>ref|NM_001074598.1| Oryza sativa (japonica cultivar-group) Os11g0546500 (Os11g0546500) mRNA, complete cds Length = 1452 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Plus Query: 103 ggcggcggtgctcgtgctgctggc 126 |||||||||||||||||||||||| Sbjct: 144 ggcggcggtgctcgtgctgctggc 167
>ref|XM_360887.1| Magnaporthe grisea 70-15 predicted protein (MG03430.4) partial mRNA Length = 1119 Score = 48.1 bits (24), Expect = 0.050 Identities = 30/32 (93%) Strand = Plus / Plus Query: 101 acggcggcggtgctcgtgctgctggcgatggt 132 |||||||||| |||||||||||||||| |||| Sbjct: 811 acggcggcggcgctcgtgctgctggcgctggt 842
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Minus Query: 103 ggcggcggtgctcgtgctgctggc 126 |||||||||||||||||||||||| Sbjct: 24276 ggcggcggtgctcgtgctgctggc 24253
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Minus Query: 103 ggcggcggtgctcgtgctgctggc 126 |||||||||||||||||||||||| Sbjct: 168175 ggcggcggtgctcgtgctgctggc 168152
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.050 Identities = 24/24 (100%) Strand = Plus / Minus Query: 103 ggcggcggtgctcgtgctgctggc 126 |||||||||||||||||||||||| Sbjct: 19449624 ggcggcggtgctcgtgctgctggc 19449601
>emb|AJ316561.1|MTR316561 Medicago truncatula mRNA for allene oxide synthase (aos gene) Length = 1753 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 ttgtttgtggttgagagatggag 85 ||||||||||||||||||||||| Sbjct: 181 ttgtttgtggttgagagatggag 159
>gb|L28920.2|YSCCHR1RAA Saccharomyces cerevisiae chromosome I right arm sequence Length = 54812 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 gcttcgagttcgtgctcaagaa 414 |||||||||||||||||||||| Sbjct: 217 gcttcgagttcgtgctcaagaa 238
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.78 Identities = 25/26 (96%) Strand = Plus / Plus Query: 85 ggcgagggtgggggcaacggcggcgg 110 ||||||||||| |||||||||||||| Sbjct: 30185587 ggcgagggtggcggcaacggcggcgg 30185612
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 44.1 bits (22), Expect = 0.78 Identities = 25/26 (96%) Strand = Plus / Plus Query: 85 ggcgagggtgggggcaacggcggcgg 110 ||||||||||| |||||||||||||| Sbjct: 81878 ggcgagggtggcggcaacggcggcgg 81903
>ref|NM_001054073.1| Oryza sativa (japonica cultivar-group) Os02g0639300 (Os02g0639300) mRNA, partial cds Length = 1625 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 ggcgtccgcggccttcgccgc 577 ||||||||||||||||||||| Sbjct: 994 ggcgtccgcggccttcgccgc 1014
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 cgtgctgctggcgatggtgct 135 ||||||||||||||||||||| Sbjct: 894106 cgtgctgctggcgatggtgct 894086
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 433 cgtctgcggcgagcgccaaggcgtc 457 |||||||||||||||||| |||||| Sbjct: 916870 cgtctgcggcgagcgccagggcgtc 916894 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 cgtctgcggcgagcgccaaggcgtc 457 |||||||||||||||||| |||||| Sbjct: 3460367 cgtctgcggcgagcgccagggcgtc 3460343
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 caacatcaaggcgggcaagct 360 ||||||||||||||||||||| Sbjct: 903213 caacatcaaggcgggcaagct 903193
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 ggcgtccgcggccttcgccgc 577 ||||||||||||||||||||| Sbjct: 25666113 ggcgtccgcggccttcgccgc 25666133
>emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in linkage group 16, complete sequence Length = 162906 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 640 aaatcatttgttatacttgct 660 ||||||||||||||||||||| Sbjct: 160773 aaatcatttgttatacttgct 160753
>gb|AC021914.7| Homo sapiens chromosome 11, clone RP11-68C8, complete sequence Length = 156507 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 634 tgtctcaaatcatttgttatacttg 658 |||||||||||||||||| |||||| Sbjct: 21917 tgtctcaaatcatttgttttacttg 21941
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gagagatggaggcgagggtgg 95 ||||||||||||||||||||| Sbjct: 160251 gagagatggaggcgagggtgg 160231
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 ggcgtccgcggccttcgccgc 577 ||||||||||||||||||||| Sbjct: 136160 ggcgtccgcggccttcgccgc 136180
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 ggcgtccgcggccttcgccgc 577 ||||||||||||||||||||| Sbjct: 68789 ggcgtccgcggccttcgccgc 68809
>dbj|AK101596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051G14, full insert sequence Length = 1626 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 ggcgtccgcggccttcgccgc 577 ||||||||||||||||||||| Sbjct: 995 ggcgtccgcggccttcgccgc 1015 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 107,153,630 Number of extensions: 5693229 Number of successful extensions: 113641 Number of sequences better than 10.0: 29 Number of HSP's gapped: 113639 Number of HSP's successfully gapped: 33 Length of query: 815 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 793 Effective length of database: 18,508,616,841 Effective search space: 14677333154913 Effective search space used: 14677333154913 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
