>P10156:H1_TETTH Histone H1 - Tetrahymena thermophila|
          Length = 164
 Score = 34.7 bits (78), Expect = 0.56
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +1

Query: 31  NGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQKKP 198
           N   K   Q ++    +   ++ A  + KK HKP K  A K T P  K   K  KP
Sbjct: 105 NPGKKAAAQPKSTKKEVKKDNKTAKKETKKDHKPAKKEAKKETKPAKKDAKKSSKP 160

>Q8DVP9:IF2_STRMU Translation initiation factor IF-2 - Streptococcus mutans|
          Length = 916

 Score = 33.9 bits (76), Expect = 0.95
 Identities = 23/68 (33%), Positives = 27/68 (39%)
 Frame = +1

Query: 13  KETLTGNGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQK 192
           KE  T    A    QAQ +T        A   +RKKQ +P KS      N    K +K K
Sbjct: 227 KEQPTVEAAATAAPQAQPQTVEQVTHPAAVDTRRKKQARPDKSRDFSHENEDGPKQNKHK 286

Query: 193 KPRPPAEQ 216
           K R    Q
Sbjct: 287 KNRNKQNQ 294

>P21679:VPD_BP186 Late control gene D protein - Bacteriophage 186|
          Length = 389

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 37  TAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQKKP 198
           TAK  H     T +  P  Q  T KRK + K  ++L      PVSKKT  +K+P
Sbjct: 228 TAKWLH-----TKDPKPQKQKVTLKRKPKEKHLRALEHPKAKPVSKKTKAKKEP 276

>Q8ZGC7:FTSK_YERPE DNA translocase ftsK - Yersinia pestis|
          Length = 1305

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 17/69 (24%), Positives = 32/69 (46%)
 Frame = -3

Query: 626 PIHQQQFHTHKKYHNSSYLRRSSDLSAPKLITSSAGLPASIDPSTSLPSQSSPFHIAPKA 447
           P H Q  +    Y  S+Y + +    +  ++TS++ +  S+ P++     ++P   AP A
Sbjct: 719 PSHTQSTYGQSTYGQSTYGQSTPAPVSQPVVTSASAISTSVTPTSIASLNTAPVSAAPVA 778

Query: 446 PFTWSPKLS 420
           P    P  S
Sbjct: 779 PSPQPPAFS 787

>Q04503:DP87_DICDI Prespore protein DP87 precursor - Dictyostelium discoideum (Slime|
           mold)
          Length = 555

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = -3

Query: 533 TSSAGLPASIDPSTSLPSQSSPFHIAPKAPFTWSPKLSTSWLAPSASCTMHASE*APSSS 354
           +S+A   AS +PS+S  S S+P   +  AP + S    +S  + SA+ +  +SE + SSS
Sbjct: 493 SSAASSAASSEPSSSAASSSAPSSASSSAPSSASSSAPSSSASSSAASSAASSESSESSS 552

>P0A3K7:IF2_STRAG Translation initiation factor IF-2 - Streptococcus agalactiae|
          Length = 927

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = +1

Query: 10  SKETLTGNGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQ 189
           +KE L     AKV+          A PSQ A  +RKKQ +  KS    + N   +K  K 
Sbjct: 241 AKEKLASKPVAKVKEIVNKVA---ATPSQTADSRRKKQTRSDKSRQFSNENEDGQKQTKN 297

Query: 190 KK 195
           KK
Sbjct: 298 KK 299

>P0A3K6:IF2_STRA3 Translation initiation factor IF-2 - Streptococcus agalactiae|
           serotype III
          Length = 927

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = +1

Query: 10  SKETLTGNGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQ 189
           +KE L     AKV+          A PSQ A  +RKKQ +  KS    + N   +K  K 
Sbjct: 241 AKEKLASKPVAKVKEIVNKVA---ATPSQTADSRRKKQTRSDKSRQFSNENEDGQKQTKN 297

Query: 190 KK 195
           KK
Sbjct: 298 KK 299

>Q3K302:IF2_STRA1 Translation initiation factor IF-2 - Streptococcus agalactiae|
           serotype Ia
          Length = 927

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = +1

Query: 10  SKETLTGNGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQ 189
           +KE L     AKV+          A PSQ A  +RKKQ +  KS    + N   +K  K 
Sbjct: 241 AKEKLASKPVAKVKEIVNKVA---ATPSQTADSRRKKQTRSDKSRQFSNENEDGQKQTKN 297

Query: 190 KK 195
           KK
Sbjct: 298 KK 299

>Q90508:VIT1_FUNHE Vitellogenin-1 precursor - Fundulus heteroclitus (Killifish)|
            (Mummichog)
          Length = 1704

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
 Frame = -3

Query: 602  THKKYHNSSYLRRSSDLSAPKLITSSAGLPASI--DPSTSLPSQSSPFHIAPKAPFTWSP 429
            T+    +SS   RSS  S+    +SS+   +S     S+S  S SS    + +   T S 
Sbjct: 1120 TNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSSSSSSSSSRSSRRVNSTRSS 1179

Query: 428  KLSTSWLAPSASCTMHASE*APSSSGERRILAARSKLRRRNSSCRAGGSAA 276
              S+   + S+  +  +   + SSS +RR      K +R +    A GS+A
Sbjct: 1180 SSSSRTSSASSLASFFSDSSSSSSSSDRRSKEVMEKFQRLHKKMVASGSSA 1230

>P93329:NO20_MEDTR Early nodulin 20 precursor - Medicago truncatula (Barrel medic)|
          Length = 268

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = -3

Query: 515 PASIDPSTSLPSQSSPFHIAPKAPFTWSPKLSTSWLAPSASCTMHASE*APSSS 354
           PAS  PS SL    SP      AP   SP  S + LAPS+S +  +   APS S
Sbjct: 192 PASPSPSPSLSKSPSPSESPSLAP---SPSDSVASLAPSSSPSDESPSPAPSPS 242

>P40059:DOT6_YEAST Disrupter of telomere silencing protein 6 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 670

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -3

Query: 623 IHQQQFHTHKKYHNSSYLRRSSD--LSAPKLITSSAGLPASIDPSTSLPSQSSPFHIAPK 450
           IH     TH + H+ +    SS   +S  +   SS  LPAS   STS  + +S  + + K
Sbjct: 12  IHLSSMDTHPQLHSLTRQPHSSSTAMSKNEAQESSPSLPASSSSSTSASASASSKN-SSK 70

Query: 449 APFTWSPK 426
            P +W P+
Sbjct: 71  NPSSWDPQ 78

>Q8E1H3:IF2_STRA5 Translation initiation factor IF-2 - Streptococcus agalactiae|
           serotype V
          Length = 927

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +1

Query: 10  SKETLTGNGTAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQ 189
           +KE L     AKV+          A PSQ A  +RKKQ +  KS    + N   +K  + 
Sbjct: 241 AKEKLASKPVAKVKEIVNKVA---ATPSQTADSRRKKQTRSDKSRQFSNENEDGQKQTRN 297

Query: 190 KK 195
           KK
Sbjct: 298 KK 299

>P53947:YNF8_YEAST Uncharacterized protein YNL058C - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 316

 Score = 31.2 bits (69), Expect = 6.1
 Identities = 25/75 (33%), Positives = 38/75 (50%)
 Frame = -3

Query: 545 PKLITSSAGLPASIDPSTSLPSQSSPFHIAPKAPFTWSPKLSTSWLAPSASCTMHASE*A 366
           P L+T++    A   P++S+ S++S    +   P   S   STS  A S+S  + AS   
Sbjct: 18  PTLVTTTTSSTALSKPTSSVVSETS----SKSLPSLTSSAFSTSSGATSSSSLIVASITP 73

Query: 365 PSSSGERRILAARSK 321
           PS++G   IL A  K
Sbjct: 74  PSTAGNPFILNAADK 88

>P97460:NPAS2_MOUSE Neuronal PAS domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 816

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = -3

Query: 602 THKKYHNSSYLRRSSDLSA--PKLITSSAGLPASIDPSTSLPSQ-SSPFHIAPKAPFTWS 432
           T  +  N   LR S+ +SA  PK + SS  LPAS    +SLPSQ SS   + P       
Sbjct: 594 TSTQVTNQHLLRESNVISAQGPKPMRSSQLLPASGRSLSSLPSQFSSTASVLP------- 646

Query: 431 PKLSTSWLAPS 399
           P LS + +AP+
Sbjct: 647 PGLSLTTIAPT 657

>Q02496:MUC1_MOUSE Mucin-1 precursor - Mus musculus (Mouse)|
          Length = 630

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = -3

Query: 512 ASIDPSTSLPSQSSPFHIAPKAPFTWSPKLSTSWLAPSASCTMHASE*APSSSGERRILA 333
           +S D S+SL S ++P H +   P T  P  STS  +P  S T   +  AP  S    +L+
Sbjct: 33  SSQDTSSSLASTTTPVHSSNSDPATRPPGDSTS--SPVQSSTSSPATRAPEDSTSTAVLS 90

Query: 332 ARS 324
             S
Sbjct: 91  GTS 93

>P29747:CREBA_DROME Cyclic AMP response element-binding protein A - Drosophila|
           melanogaster (Fruit fly)
          Length = 516

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = -3

Query: 569 RRSSDLSAPKLITSSAGLPASIDPSTSLPSQSSPFHIAPKAPFTWSPKLSTSWLAPSASC 390
           ++S+  S+ K      G+P  + P +SLPS  S  +++P+  F        + L+P+A+ 
Sbjct: 297 KQSTSNSSDKSHAHGYGIP--LTPPSSLPSDDSEGNLSPEHLF--------APLSPNATV 346

Query: 389 TMHASE*APSSSGERRILAARSKLRRRNSSCRAGGSA 279
           ++  +  A   S  R    A S  R  + S  A GS+
Sbjct: 347 SISVANPAGGESSVRVSRTAASITRSSSGSASASGSS 383

>Q23361:ALG12_CAEEL Probable dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,|
           6-mannosyltransferase - Caenorhabditis elegans
          Length = 492

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 179 VFFETGLVDFTARLLVGLCCFFRLPVAACDGGAMLGVRVWAWCLTFAVP 33
           + F   LV     + +G     RL V   DG   +GVR+ A CL  ++P
Sbjct: 173 ILFRCELVLLYGPIFLGYMISGRLKVFGFDGAIAIGVRIAAMCLAVSIP 221

>P83741:WNK1_MOUSE Serine/threonine-protein kinase WNK1 - Mus musculus (Mouse)|
          Length = 2377

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 55  QAQTRTPNMAPPSQAATGKRKKQHKPTKSLA-VKSTNPVSKKTHKQKKPRPPAEQ 216
           QAQ++   + PPS  A G  + Q +P+ SLA V S+ P+     +  +P  P++Q
Sbjct: 700 QAQSQPHGVYPPSSMAQG--QNQGQPSSSLAGVLSSQPIQHPQQQGIQPTVPSQQ 752

>Q58Z64:DHH1_CRYNV ATP-dependent RNA helicase VAD1 - Cryptococcus neoformans var.|
           grubii (Filobasidiella neoformans var. grubii)
          Length = 616

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 82  APPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQKKPRPPAEQDQ 222
           APP+Q    +R++QH P  S  V   +P +    +Q++ +   +Q Q
Sbjct: 431 APPAQQQPQQRQRQHPPVPSHQVAHHSPAAAPIQQQQQQQQQQQQPQ 477

>Q5KJI2:DHH1_CRYNE ATP-dependent RNA helicase DHH1 - Cryptococcus neoformans|
           (Filobasidiella neoformans)
          Length = 625

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 82  APPSQAATGKRKKQHKPTKSLAVKSTNPVSKKTHKQKKPRPPAEQDQ 222
           APP+Q    +R++QH P  S      +P +    +Q++ +   +Q Q
Sbjct: 431 APPAQQQPQQRQRQHPPVPSHQAAQQSPAAAPVQQQQQQQQQQQQQQ 477

>Q9SFD5:ADA2A_ARATH Transcriptional adapter ADA2a - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 548

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +1

Query: 37  TAKVRHQAQTRTPNMAPPSQAATGKRKKQHKPTKS--LAVKSTNPVSKKTHKQKKPRPPA 210
           +A+++H+A  +   + PP  A  G +KK + P     + +++    S ++  +KK R P 
Sbjct: 204 SAEIKHEASGKVNEIDPPLSALAGVKKKGNVPQAKDIIKLEAAKQQSDRSVGEKKLRLPG 263

Query: 211 EQ 216
           E+
Sbjct: 264 EK 265


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 151,050,632
Number of extensions: 3266338
Number of successful extensions: 11452
Number of sequences better than 10.0: 21
Number of HSP's gapped: 11403
Number of HSP's successfully gapped: 21
Length of query: 307
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 194
Effective length of database: 69,691,104
Effective search space: 13520074176
Effective search space used: 13520074176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)