ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001059055.1| Oryza sativa (japonica cultivar-group) Os04g... 250 8e-63
2dbj|AK103339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 8e-63
3dbj|AK061248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 8e-63
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 161 5e-36
5emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4,... 161 5e-36
6emb|CR855091.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 153 1e-33
7gb|AY110174.1| Zea mays CL11342_-1 mRNA sequence 82 4e-12
8gb|DQ019738.1| Venonia micarioides 28S ribosomal RNA gene, parti... 48 0.056
9gb|AC188667.3| Pan troglodytes BAC clone CH251-151P23 from chrom... 44 0.88
10gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 44 0.88
11gb|AC146506.1| Solanum demissum chromosome 5 clone PGEC989P08, c... 44 0.88
12gb|AC104645.8| Homo sapiens chromosome 3 clone CTD-2011M13, comp... 44 0.88
13gb|AE011809.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.88
14gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, compl... 44 0.88
15gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G... 44 0.88
16emb|CR855163.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 3.5
17gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome... 42 3.5
18gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 ma... 42 3.5
19gb|AF204063.1| Oryza sativa MADS box protein MADS1 gene, promote... 42 3.5
20gb|AY369265.2| Burkholderia cenocepacia phage Bcep1, complete ge... 42 3.5
21gb|AY895163.1| Oryza sativa (indica cultivar-group) MADS box pro... 42 3.5
22gb|AC090691.16| Homo sapiens chromosome 8, clone RP11-338B22, co... 42 3.5
23gb|CP000088.1| Thermobifida fusca YX, complete genome 42 3.5
24emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 3.5
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.5
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.5
27dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 42 3.5
28gb|AF346499.1|AF346499 Photorhabdus luminescens strain W14 toxin... 42 3.5
29gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.5
30gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 42 3.5
31dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 3.5
32gb|AF047028.1|AF047028 Photorhabdus luminescens insecticidal tox... 42 3.5
33emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on ch... 42 3.5
34emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chr... 42 3.5 
>ref|NM_001059055.1| Oryza sativa (japonica cultivar-group) Os04g0348100 (Os04g0348100)
           mRNA, complete cds
          Length = 1063
 Score =  250 bits (126), Expect = 8e-63
 Identities = 180/198 (90%)
 Strand = Plus / Plus

                                                                       
Query: 258 cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
           ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 266 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 325

                                                                       
Query: 318 cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactctga 377
           |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||
Sbjct: 326 cagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactccga 385

                                                                       
Query: 378 ggcgtgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgacca 437
           ||  |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||
Sbjct: 386 gggatgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgacca 445

                             
Query: 438 tgtgaagggggcctttgg 455
           |||||| |||||||||||
Sbjct: 446 tgtgaaaggggcctttgg 463



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 100 gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
           |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 126 gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 185

                      
Query: 160 aatcccgtctc 170
           |||||||||||
Sbjct: 186 aatcccgtctc 196



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 768 tagggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacat 827
           |||||| |||||||||||||||| ||  |||||  |  | |||||||| || || |||||
Sbjct: 578 taggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacat 637

                             
Query: 828 gaaagcggaggagcaggt 845
           ||||| ||||||||||||
Sbjct: 638 gaaagtggaggagcaggt 655
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>dbj|AK103339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126A18, full
           insert sequence
          Length = 1024

 Score =  250 bits (126), Expect = 8e-63
 Identities = 180/198 (90%)
 Strand = Plus / Plus

                                                                       
Query: 258 cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
           ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 222 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 281

                                                                       
Query: 318 cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactctga 377
           |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||
Sbjct: 282 cagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactccga 341

                                                                       
Query: 378 ggcgtgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgacca 437
           ||  |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||
Sbjct: 342 gggatgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgacca 401

                             
Query: 438 tgtgaagggggcctttgg 455
           |||||| |||||||||||
Sbjct: 402 tgtgaaaggggcctttgg 419



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 100 gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
           |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 82  gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 141

                      
Query: 160 aatcccgtctc 170
           |||||||||||
Sbjct: 142 aatcccgtctc 152



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 768 tagggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacat 827
           |||||| |||||||||||||||| ||  |||||  |  | |||||||| || || |||||
Sbjct: 534 taggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacat 593

                             
Query: 828 gaaagcggaggagcaggt 845
           ||||| ||||||||||||
Sbjct: 594 gaaagtggaggagcaggt 611
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>dbj|AK061248.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E12, full
           insert sequence
          Length = 1063

 Score =  250 bits (126), Expect = 8e-63
 Identities = 180/198 (90%)
 Strand = Plus / Plus

                                                                       
Query: 258 cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
           ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 266 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 325

                                                                       
Query: 318 cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactctga 377
           |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||
Sbjct: 326 cagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactccga 385

                                                                       
Query: 378 ggcgtgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgacca 437
           ||  |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||
Sbjct: 386 gggatgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgacca 445

                             
Query: 438 tgtgaagggggcctttgg 455
           |||||| |||||||||||
Sbjct: 446 tgtgaaaggggcctttgg 463



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 100 gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
           |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 126 gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 185

                      
Query: 160 aatcccgtctc 170
           |||||||||||
Sbjct: 186 aatcccgtctc 196



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 768 tagggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacat 827
           |||||| |||||||||||||||| ||  |||||  |  | |||||||| || || |||||
Sbjct: 578 taggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacat 637

                             
Query: 828 gaaagcggaggagcaggt 845
           ||||| ||||||||||||
Sbjct: 638 gaaagtggaggagcaggt 655
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  161 bits (81), Expect = 5e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                            
Query: 258      cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
                ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 16584272 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 16584213

                                                                         
Query: 318      cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactc 374
                |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 16584212 cagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactc 16584156



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 382      tgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgaccatgtg 441
                |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||||||
Sbjct: 16584073 tgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgaccatgtg 16584014

                              
Query: 442      aagggggcctttgg 455
                || |||||||||||
Sbjct: 16584013 aaaggggcctttgg 16584000



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                            
Query: 100      gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
                |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 16584412 gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 16584353

                           
Query: 160      aatcccgtctc 170
                |||||||||||
Sbjct: 16584352 aatcccgtctc 16584342



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                            
Query: 769      agggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacatg 828
                ||||| |||||||||||||||| ||  |||||  |  | |||||||| || || ||||||
Sbjct: 16583707 aggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacatg 16583648

                                              
Query: 829      aaagcggaggagcaggtatgccttgtctca 858
                |||| |||||||||||| ||  ||||||||
Sbjct: 16583647 aaagtggaggagcaggtttgtattgtctca 16583618



 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 228      cgccgtcgccgccgcaggtga 248
                |||||||||||||||||||||
Sbjct: 21377273 cgccgtcgccgccgcaggtga 21377293
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>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02,
              complete sequence
          Length = 172435

 Score =  161 bits (81), Expect = 5e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                          
Query: 258    cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
              ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 113505 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 113446

                                                                       
Query: 318    cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactc 374
              |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 113445 cagcttcgagcgcgccgccaagatgcgcctctccccgctcgagctcgacgcctactc 113389



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                          
Query: 382    tgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgaccatgtg 441
              |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||||||
Sbjct: 113306 tgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgaccatgtg 113247

                            
Query: 442    aagggggcctttgg 455
              || |||||||||||
Sbjct: 113246 aaaggggcctttgg 113233



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                          
Query: 100    gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
              |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 113645 gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 113586

                         
Query: 160    aatcccgtctc 170
              |||||||||||
Sbjct: 113585 aatcccgtctc 113575



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                          
Query: 769    agggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacatg 828
              ||||| |||||||||||||||| ||  |||||  |  | |||||||| || || ||||||
Sbjct: 112940 aggggtttaaagatgtttactaaagagtgccgccctattaagctctttgctaagcacatg 112881

                                            
Query: 829    aaagcggaggagcaggtatgccttgtctca 858
              |||| |||||||||||| ||  ||||||||
Sbjct: 112880 aaagtggaggagcaggtttgtattgtctca 112851
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>emb|CR855091.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0130K07,
             complete sequence
          Length = 98885

 Score =  153 bits (77), Expect = 1e-33
 Identities = 107/117 (91%)
 Strand = Plus / Minus

                                                                         
Query: 258   cggtggcgtcctcttgtcggccgcgctgccgccggcgcggcaactcgagttcctcctccg 317
             ||||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||
Sbjct: 65534 cggtggcgtcctcctgtcggccgagatgccccctgcgcggcagctcgagttcctcctccg 65475

                                                                      
Query: 318   cagcttcgagcgcgccgccaagatgcgcctctccccactcgaactcggcgcctactc 374
             |||||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 65474 cagcttcgagcgtgccgccaagatgcgcctctccccgctcgagctcgacgcctactc 65418



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                         
Query: 382   tgcatggtgcagctcgccgagggggcgagccaggacgtggagagctttggtgaccatgtg 441
             |||||||||| |||||| |||||||||||||||||||||||| | || ||||||||||||
Sbjct: 65335 tgcatggtgccgctcgcggagggggcgagccaggacgtggagggattcggtgaccatgtg 65276

                           
Query: 442   aagggggcctttgg 455
             || |||||||||||
Sbjct: 65275 aaaggggcctttgg 65262



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 100   gccaccggcaagcggaagaagcagcacaaacccaccaagagcctcgccgtgaaatcaacc 159
             |||||| ||||||||||||||| ||||||||||||||| | |||||||  |||  | |||
Sbjct: 65674 gccacccgcaagcggaagaagccgcacaaacccaccaaaaccctcgccaagaaccccacc 65615

                        
Query: 160   aatcccgtctc 170
             |||||||||||
Sbjct: 65614 aatcccgtctc 65604



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                         
Query: 769   agggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacatg 828
             ||||| |||||||||||||||| ||  |||||  | || |||||||| || || ||||||
Sbjct: 64969 aggggtttaaagatgtttactaaagagtgccgccctgttaagctctttgctaagcacatg 64910

                                           
Query: 829   aaagcggaggagcaggtatgccttgtctca 858
             |||| |||||||||||| ||  ||||||||
Sbjct: 64909 aaagtggaggagcaggtttgtattgtctca 64880



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 506   tcgatgcgggcagcccagcgctgctggttatcagcttgggtgcactgagatcactggacc 565
             |||| ||||||||||| ||||| ||||||||| ||| || ||| ||||||||  |||| |
Sbjct: 65211 tcgacgcgggcagcccggcgctcctggttatctgctcggctgctctgagatcgttggagc 65152

                        
Query: 566   ttctgaggtag 576
             |||| ||||||
Sbjct: 65151 ttcttaggtag 65141
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>gb|AY110174.1| Zea mays CL11342_-1 mRNA sequence
          Length = 630

 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                       
Query: 769 agggggttaaagatgtttactagaggatgccgttcagtaaagctcttcgccaaacacatg 828
           ||||| || ||||||||||||| || ||||||  ||||||||||||| ||||||||| ||
Sbjct: 538 aggggtttgaagatgtttactaaagaatgccgaccagtaaagctctttgccaaacacttg 479

                            
Query: 829 aaagcggaggagcaggt 845
           |||| ||||||||||||
Sbjct: 478 aaagtggaggagcaggt 462
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>gb|DQ019738.1| Venonia micarioides 28S ribosomal RNA gene, partial sequence
          Length = 598

 Score = 48.1 bits (24), Expect = 0.056
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  ccgccgtcgcaggcggccaccggc 108
           ||||||||||||||||||||||||
Sbjct: 257 ccgccgtcgcaggcggccaccggc 280
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>gb|AC188667.3| Pan troglodytes BAC clone CH251-151P23 from chromosome 7, complete
             sequence
          Length = 179744

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 861   atgaaaattttctgtagcatca 882
             ||||||||||||||||||||||
Sbjct: 43721 atgaaaattttctgtagcatca 43742
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 603   atgaaactgctgttgatgaatt 624
             ||||||||||||||||||||||
Sbjct: 69176 atgaaactgctgttgatgaatt 69155
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>gb|AC146506.1| Solanum demissum chromosome 5 clone PGEC989P08, complete sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 603   atgaaactgctgttgatgaatt 624
             ||||||||||||||||||||||
Sbjct: 81560 atgaaactgctgttgatgaatt 81581
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>gb|AC104645.8| Homo sapiens chromosome 3 clone CTD-2011M13, complete sequence
          Length = 153595

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 564   ccttctgaggtagctgctgtta 585
             ||||||||||||||||||||||
Sbjct: 31713 ccttctgaggtagctgctgtta 31692
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>gb|AE011809.1| Xanthomonas axonopodis pv. citri str. 306,  section 187 of 469 of the
            complete genome
          Length = 14520

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 92   cgcaggcggccaccggcaagcg 113
            ||||||||||||||||||||||
Sbjct: 3128 cgcaggcggccaccggcaagcg 3149
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>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence
          Length = 219227

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 564    ccttctgaggtagctgctgtta 585
              ||||||||||||||||||||||
Sbjct: 198113 ccttctgaggtagctgctgtta 198092
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>gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G24, complete sequence
          Length = 163384

 Score = 44.1 bits (22), Expect = 0.88
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 861   atgaaaattttctgtagcatca 882
             ||||||||||||||||||||||
Sbjct: 21616 atgaaaattttctgtagcatca 21595
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>emb|CR855163.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0160I14,
             complete sequence
          Length = 73693

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   cgccgtcgccgccgcaggtga 248
             |||||||||||||||||||||
Sbjct: 25748 cgccgtcgccgccgcaggtga 25768
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>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0030I09 map C83B, complete sequence
          Length = 123477

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   cggccgcgctgccgccggcgc 295
             |||||||||||||||||||||
Sbjct: 76537 cggccgcgctgccgccggcgc 76557
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>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete
            sequence
          Length = 194193

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 471  ggagctctgtgaggggagact 491
            |||||||||||||||||||||
Sbjct: 7744 ggagctctgtgaggggagact 7764
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>gb|AF204063.1| Oryza sativa MADS box protein MADS1 gene, promoter and complete cds
          Length = 11851

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 218  accaaaccaacgccgtcgccgccgc 242
            ||||||||||||||| |||||||||
Sbjct: 2178 accaaaccaacgccgccgccgccgc 2202
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>gb|AY369265.2| Burkholderia cenocepacia phage Bcep1, complete genome
          Length = 48177

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   cggccgcgctgccgccggcgc 295
             |||||||||||||||||||||
Sbjct: 30389 cggccgcgctgccgccggcgc 30409
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>gb|AY895163.1| Oryza sativa (indica cultivar-group) MADS box protein (MADS1) gene,
            promoter region and partial cds
          Length = 4288

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 218  accaaaccaacgccgtcgccgccgc 242
            ||||||||||||||| |||||||||
Sbjct: 4074 accaaaccaacgccgccgccgccgc 4098
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>gb|AC090691.16| Homo sapiens chromosome 8, clone RP11-338B22, complete sequence
          Length = 180766

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 468   gggggagctctgtgaggggag 488
             |||||||||||||||||||||
Sbjct: 55370 gggggagctctgtgaggggag 55390
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 272     tgtcggccgcgctgccgccgg 292
               |||||||||||||||||||||
Sbjct: 3578152 tgtcggccgcgctgccgccgg 3578172
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   cgccgtcgccgccgcaggtga 248
             |||||||||||||||||||||
Sbjct: 27023 cgccgtcgccgccgcaggtga 27043
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 275     cggccgcgctgccgccggcgc 295
               |||||||||||||||||||||
Sbjct: 2545867 cggccgcgctgccgccggcgc 2545847
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 218     accaaaccaacgccgtcgccgccgc 242
               ||||||||||||||| |||||||||
Sbjct: 6028572 accaaaccaacgccgccgccgccgc 6028548
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 385    atggtgcagctcgccgagggggcga 409
              |||||| ||||||||||||||||||
Sbjct: 745008 atggtggagctcgccgagggggcga 745032
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>gb|AF346499.1|AF346499 Photorhabdus luminescens strain W14 toxin complex tcc locus, partial
             sequence
          Length = 25655

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    tggcgccgccgtcgcaggcgg 100
             |||||||||||||||||||||
Sbjct: 10818 tggcgccgccgtcgcaggcgg 10798
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>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
             complete sequence
          Length = 111961

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   accaaaccaacgccgtcgccgccgc 242
             ||||||||||||||| |||||||||
Sbjct: 87894 accaaaccaacgccgccgccgccgc 87870
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>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   accaaaccaacgccgtcgccgccgc 242
             ||||||||||||||| |||||||||
Sbjct: 22835 accaaaccaacgccgccgccgccgc 22811
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 277     gccgcgctgccgccggcgcggcaac 301
               ||||||| |||||||||||||||||
Sbjct: 2569653 gccgcgccgccgccggcgcggcaac 2569629
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>gb|AF047028.1|AF047028 Photorhabdus luminescens insecticidal toxin complex proteins TccA
            (tccA), TccB (tccB), TccC (tccC), and TccZ (tccZ) genes,
            complete cds
          Length = 11518

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   tggcgccgccgtcgcaggcgg 100
            |||||||||||||||||||||
Sbjct: 7654 tggcgccgccgtcgcaggcgg 7634
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>emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on chromosome 14, complete
             sequence
          Length = 198113

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 563   accttctgaggtagctgctgttatg 587
             ||||||||||||||||||| |||||
Sbjct: 89153 accttctgaggtagctgctattatg 89129
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>emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chromosome 4, complete
              sequence
          Length = 193852

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 471    ggagctctgtgaggggagact 491
              |||||||||||||||||||||
Sbjct: 116736 ggagctctgtgaggggagact 116756


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 155,919,598
Number of extensions: 8745048
Number of successful extensions: 209976
Number of sequences better than 10.0: 34
Number of HSP's gapped: 209971
Number of HSP's successfully gapped: 53
Length of query: 922
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 899
Effective length of database: 18,503,978,556
Effective search space: 16635076721844
Effective search space used: 16635076721844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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