>P80428:ARP4_YEAST Actin-like protein 4 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 489
 Score = 32.3 bits (72), Expect = 2.1
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -2

Query: 739 WPQPQTLCEQTNKSRFLPNARTACENLAKSDKKMTAIEMKPH--LPPSSSRLAKTSDT 572
           WP+  +   +T ++ ++P  RT    + KSDKK+T  E K    +  S+S  A ++DT
Sbjct: 304 WPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADT 361

>Q92072:DNMT1_CHICK DNA - Gallus gallus (Chicken)|
          Length = 1537

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 406 LLSRAAPGHAEDNDKRLDHAGGGDGGCLRLRACAASNSEVSMSNMTCTS 260
           L SRA+ G A + ++  +  G G+ G + +   AAS+S  S S+ + +S
Sbjct: 94  LFSRASNGCAGNGEEEWERGGRGEDGAMEVEEAAASSSSSSSSSSSSSS 142

>Q5K915:HUT1_CRYNE UDP-galactose transporter homolog 1 - Cryptococcus neoformans|
           (Filobasidiella neoformans)
          Length = 412

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = +1

Query: 427 MALTKNVTMLPLVYKLLLPVHQATIPLLLHLPP 525
           MALT  + +LPL   L+LP+    I LL HLPP
Sbjct: 266 MALTTQIILLPL---LVLPLPTNPISLLAHLPP 295

>Q9H0M0:WWP1_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP1 - Homo sapiens (Human)|
          Length = 922

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +3

Query: 417 VAVHGTHEERYHVTTSLQVTAACAS----GDHPPASSSTPGERAKDRP 548
           +AV GT+    HV TS  V  +C S    GD+ P+S S    R K+ P
Sbjct: 181 LAVEGTNGIDNHVPTSTLVQNSCCSYVVNGDNTPSSPSQVAARPKNTP 228

>P78423:X3CL1_HUMAN Fractalkine precursor - Homo sapiens (Human)|
          Length = 397

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 619 PHLP-PSSSRLAKTSDTASIYTPSTGRSFALSPGVDEEA 506
           PH P PS    AKTS+  S   PST  S A SP  +E A
Sbjct: 202 PHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 240

>Q96IQ7:VSIG2_HUMAN V-set and immunoglobulin domain-containing protein 2 precursor -|
           Homo sapiens (Human)
          Length = 327

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 634 AIEMKPHLPPSSSRLAKTSDTASIYTPSTGRSFAL 530
           A+E+K    P S+ L KT++    Y+ S G SFAL
Sbjct: 23  AVEVKVPTEPLSTPLGKTAELTCTYSTSVGDSFAL 57

>P52506:UNG_PRVIF Uracil-DNA glycosylase - Pseudorabies virus (strain|
           Indiana-Funkhauser / Becker) (PRV)
          Length = 315

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 685 NARTACENLAKSDKKMTAIEMKPHLPPSSSRLAKTSDTASIYTPSTGRSFALSPGVDEEA 506
           NA TA    A +     A   KP  PP+++R AK +  AS  T +TG   A +P  D  A
Sbjct: 30  NAATAAAAAAPAGAGAGA--SKPARPPAAARPAKGTPAASAATTATGAD-ASAPAPDPGA 86

Query: 505 GGWSPDAQAA 476
             W  DA AA
Sbjct: 87  PTW--DAFAA 94

>Q8DR59:PBPA_STRR6 Penicillin-binding protein 1A - Streptococcus pneumoniae (strain|
           ATCC BAA-255 / R6)
          Length = 719

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -2

Query: 667 ENLAKSDKKMTAIEMKPHLPPSSSRLAKTSDTA----SIYTPSTGRSFALSPGVDEEAGG 500
           E + K+  + T     P  PPS+   + +SD++    S  TPST  S   +P  + +   
Sbjct: 645 EFVFKNGARSTWSSPAPQQPPSTESSSSSSDSSTSQSSSTTPSTNNSTTTNPNNNTQQSN 704

Query: 499 WSPDAQ 482
            +PD Q
Sbjct: 705 TTPDQQ 710

>Q04707:PBPA_STRPN Penicillin-binding protein 1A - Streptococcus pneumoniae|
          Length = 719

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -2

Query: 685 NARTACENLAKSDKKMTAIEMKPHLPPSSSRLAKTSDTASIYTPSTGRSFALSPGVDEEA 506
           N     +N A+S     A +  P    SSS    ++  +S  TPST  S   +P  + + 
Sbjct: 643 NGEFVFKNGARSTWNSPAPQQPPSTESSSSSSDSSTSQSSSTTPSTNNSTTTNPNNNTQQ 702

Query: 505 GGWSPDAQ 482
              +PD Q
Sbjct: 703 SNTTPDQQ 710

>P10290:MYBC_MAIZE Anthocyanin regulatory C1 protein - Zea mays (Maize)|
          Length = 273

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 24/83 (28%), Positives = 30/83 (36%)
 Frame = -2

Query: 577 DTASIYTPSTGRSFALSPGVDEEAGGWSPDAQAAVTCKLVVTW*RSS*VPCTATNGLLLS 398
           DT S  TP+   S A   G +  A    PD+    T      W   + V CT        
Sbjct: 132 DTGSHATPAA-TSGACETGQNSAAHRADPDSAGTTTTSAAAVWAPKA-VRCTGGLFFFHR 189

Query: 397 RAAPGHAEDNDKRLDHAGGGDGG 329
              P HA +    +   GGG GG
Sbjct: 190 DTTPAHAGETATPMAGGGGGGGG 212


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 117,340,129
Number of extensions: 2346164
Number of successful extensions: 6820
Number of sequences better than 10.0: 10
Number of HSP's gapped: 6817
Number of HSP's successfully gapped: 10
Length of query: 256
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 145
Effective length of database: 70,239,694
Effective search space: 10184755630
Effective search space used: 10184755630
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)