ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf50m20 |
|---|---|
| Clone Library Name | barley_pub |
>AK067096:Os04g0481300 | Length = 268 Score = 394 bits (1012), Expect = e-110 Identities = 199/239 (83%), Positives = 214/239 (89%), Gaps = 3/239 (1%) Frame = +2 Query: 134 AGNIRRQVLQPEGRAKLDPRSDRDFYAFPRLVKHVDDGFLATLTDLYRERLRPESDVLDL 313 AG IRR VL PEGRAKLD R DRDFYAFPRLVKHVDDGFLA L DLYRERLRP DVLDL Sbjct: 32 AGGIRRLVLTPEGRAKLDARPDRDFYAFPRLVKHVDDGFLAALADLYRERLRPGWDVLDL 91 Query: 314 MSSWVSHLPPDTRF--RRVVGHGLNAQELAKNPRLDYFFVSDLNREQRLELDSASFDAVL 487 MSSWVSHLPP+ RRVVGHGLNAQELAKNPRLDYFFV DLN+EQRLEL ++S DAVL Sbjct: 92 MSSWVSHLPPERELPLRRVVGHGLNAQELAKNPRLDYFFVKDLNKEQRLELQTSSLDAVL 151 Query: 488 CTVSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYEKAIGAWREGSAYSRVQLVTQY 667 CTVSVQYLQSPE+VFAEI+RVLKPGGVCIVSFSNRMFYEKAIGAWREG+AYSRVQLVTQY Sbjct: 152 CTVSVQYLQSPEKVFAEIFRVLKPGGVCIVSFSNRMFYEKAIGAWREGTAYSRVQLVTQY 211 Query: 668 FQCIEGFTQPEVVRRLPPSDAGGKSGSSSPLEALMRLFGQA-NSDPFYAVISYRNFKPM 841 FQC++GFT+PEVVR+LP AGGK +SPL+A+MRLFG A +SDPFYAVISYRNFKPM Sbjct: 212 FQCVDGFTEPEVVRKLPSDAAGGK--PASPLDAVMRLFGMAGSSDPFYAVISYRNFKPM 268
>Os01g0712600:Os01g0712600 | Length = 307 Score = 144 bits (362), Expect = 1e-34 Identities = 77/184 (41%), Positives = 101/184 (54%), Gaps = 4/184 (2%) Frame = +2 Query: 167 EGRAKLDPRSDRDFYAFPRLVKHVDDGFLATLTDLYRERLRPESD----VLDLMSSWVSH 334 E ++ D SD FY+ PR V H+DD + LT Y E L P + +LD+ SSWVSH Sbjct: 102 EDFSRFDESSDALFYSAPRYVTHIDDQAIEALTKYYSEVLPPSNTPGVAILDMCSSWVSH 161 Query: 335 LPPDTRFRRVVGHGLNAQELAKNPRLDYFFVSDLNREQRLELDSASFDAVLCTVSVQYLQ 514 PP + ++VG G+N EL +NP L + V DLN +L + +FD + VSV YL Sbjct: 162 YPPGYKQEKIVGMGMNEDELKRNPVLTEYVVQDLNVNPKLPFEDNTFDVITNVVSVDYLT 221 Query: 515 SPEQVFAEIYRVLKPGGVCIVSFSNRMFYEKAIGAWREGSAYSRVQLVTQYFQCIEGFTQ 694 P VF E+ R+LKP G+ I+SFSNR F+ KAI W S +V YF F Sbjct: 222 KPIDVFKEMRRILKPSGLAIMSFSNRCFWTKAISIWTSTSDADHAWIVGAYFHYAGDFEP 281 Query: 695 PEVV 706 PE V Sbjct: 282 PEAV 285
>AK120890:Os08g0411200 | Length = 358 Score = 37.4 bits (85), Expect = 0.016 Identities = 24/64 (37%), Positives = 29/64 (45%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYEKAIGAWRE 628 RL S S DAV ++ SP AEI RVL+PGGV + S A+ R Sbjct: 250 RLPFVSGSIDAVHAAAAIHCWPSPACAVAEISRVLRPGGVFVASTFVADILPPAVPVLRI 309 Query: 629 GSAY 640 G Y Sbjct: 310 GRPY 313
>AK104339:Os06g0646000 | Length = 345 Score = 36.6 bits (83), Expect = 0.027 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 RL S+S DA+ ++ SP AEI RVL+PGGV + + Sbjct: 236 RLPFASSSIDAIHAGAAIHCWPSPSNAVAEISRVLRPGGVFVAT 279
>AK068674:Os06g0646000 | Length = 345 Score = 36.6 bits (83), Expect = 0.027 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 RL S+S DA+ ++ SP AEI RVL+PGGV + + Sbjct: 236 RLPFASSSIDAIHAGAAIHCWPSPSNAVAEISRVLRPGGVFVAT 279
>AK120397:Os03g0775200 | Length = 729 Score = 32.3 bits (72), Expect = 0.51 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +2 Query: 446 QRLELDSASFDAVLC-TVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 +RL S +FDA+ C ++ + + ++ EI R+L+PGG I+S Sbjct: 403 KRLPFPSGAFDAIHCGDCNIPWHSNGGKLLLEINRILRPGGYFIIS 448
>Os07g0179300:Os07g0179300 | Length = 241 Score = 32.0 bits (71), Expect = 0.66 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 470 SFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGV-CIV 577 +FD + S++Y P++ E YRVLK GGV C++ Sbjct: 79 TFDRYVSAGSIEYWPDPQRGIREAYRVLKLGGVACLI 115
>AK106511:Os08g0540500 | Length = 315 Score = 31.6 bits (70), Expect = 0.87 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 9/123 (7%) Frame = +2 Query: 236 VDDGFLATLTDLYRERLRPESDVLDLMSSWVSHLPPDTRFRRVVGHGLNAQELAKNPRLD 415 +D G + T R R + V++ + S P V ++ +++ D Sbjct: 117 IDSGLIETANWNLRRMSRLDKVVVENTKAHKSSDSPSESCPEKVAPEISNGDISNGSHHD 176 Query: 416 YFFVSDLNREQRLE---LDSASFDAVLCTVSVQYLQ------SPEQVFAEIYRVLKPGGV 568 F V RE ++ S +D ++C +++ +F +I+R+L+PGGV Sbjct: 177 IFKVVSFRRENFVDSMCTSSEQYDTIVCLSVTKWIHLNWGDDGIITLFVKIWRLLRPGGV 236 Query: 569 CIV 577 I+ Sbjct: 237 FIM 239
>AK065174: | Length = 610 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +2 Query: 446 QRLELDSASFDAVLCT-VSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYEKAIGAW 622 QRL SA+FD C+ + + + E++RVL+PGG +S + YE W Sbjct: 260 QRLPFPSAAFDMAHCSRCLIPWTEFGGLYLLEVHRVLRPGGFWALS-GPPVNYENRWHGW 318 Query: 623 REGSAYSRVQL 655 +A + L Sbjct: 319 NTTAAAQKADL 329
>AK121681:Os03g0136200 | Length = 363 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCI 574 + ASFD + + + V+ E++RVLKPGG+ + Sbjct: 190 MPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYV 230
>AK061274:Os02g0744100 | Length = 293 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +2 Query: 446 QRLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCI 574 + L + S DAV+ T+ + + E EI RVLKPGG+ I Sbjct: 179 EALPAEDNSMDAVVGTLVMCSVSDVEMALREIKRVLKPGGLYI 221
>AK060887:Os03g0136200 | Length = 363 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCI 574 + ASFD + + + V+ E++RVLKPGG+ + Sbjct: 190 MPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYV 230
>AF042333:Os03g0136200 | Length = 363 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCI 574 + ASFD + + + V+ E++RVLKPGG+ + Sbjct: 190 MPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYV 230
>AK105795:Os12g0615400 | Length = 348 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGV-CIV 577 L + +FD + S++Y P++ E YRVL+ GGV C++ Sbjct: 180 LPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMI 222
>AK104295:Os12g0615400 | Length = 348 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGV-CIV 577 L + +FD + S++Y P++ E YRVL+ GGV C++ Sbjct: 180 LPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMI 222
>AK103998:Os12g0615400 | Length = 348 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGV-CIV 577 L + +FD + S++Y P++ E YRVL+ GGV C++ Sbjct: 180 LPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMI 222
>AK072988:Os12g0615400 | Length = 348 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 452 LELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGV-CIV 577 L + +FD + S++Y P++ E YRVL+ GGV C++ Sbjct: 180 LPFPTDTFDRYVSAGSIEYWPDPQRGIKEAYRVLRLGGVACMI 222
>Os09g0502600:Os09g0502600 | Length = 523 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = -1 Query: 879 RSRRCEGRTEEFHMGLKFLYEMTA*NGSELACPNSLIRASSGDDEPDLPPASEGGSLLTT 700 R RR + R++ F +GL L+ L+ S+ ++ P S+GG ++T Sbjct: 17 RRRRNKARSKRFPLGLSALH---------LSEGGSITKSVRRKYSPCQQDDSQGGKMMTN 67 Query: 699 SGCVNPSMHWKYCVT 655 SG P W Y ++ Sbjct: 68 SGVTLPEDIWSYILS 82
>AK100653:Os07g0206700 | Length = 344 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPG 562 ++ +FDAV + + P + EIYRVLKPG Sbjct: 161 KMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPG 198
>AK072893:Os07g0206700 | Length = 344 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPG 562 ++ +FDAV + + P + EIYRVLKPG Sbjct: 161 KMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPG 198
>AF042332:Os07g0206700 | Length = 318 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 449 RLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPG 562 ++ +FDAV + + P + EIYRVLKPG Sbjct: 161 KMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPG 198
>AK101588:Os05g0327000 | Length = 222 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = +3 Query: 3 SVQSPPKQRRSKTCSALHRKRCVRRGRSCPHRDAPAARSRHRP 131 S+ PP++ R S L R R RR R PH P R HRP Sbjct: 45 SIPFPPRRARGGR-SPLPRHRRRRRRRLRPHPRLPRRRDAHRP 86
>AK103284:Os03g0640800 | Length = 859 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 425 VSDLNREQRLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYE 604 + D++ E+ L+ D LCT + +Q Q FA + PGGVC+ S + YE Sbjct: 784 LQDISLEKILDDDGRK---ALCTEFPKIMQ---QGFAYL-----PGGVCVSSMGRPVSYE 832 Query: 605 KAIGAWR 625 +A+ AW+ Sbjct: 833 QAV-AWK 838
>AK101425:Os03g0640800 | Length = 341 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 425 VSDLNREQRLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYE 604 + D++ E+ L+ D LCT + +Q Q FA + PGGVC+ S + YE Sbjct: 266 LQDISLEKILDDDGRK---ALCTEFPKIMQ---QGFAYL-----PGGVCVSSMGRPVSYE 314 Query: 605 KAIGAWR 625 +A+ AW+ Sbjct: 315 QAV-AWK 320
>AK100601:Os10g0510400 | Length = 634 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +2 Query: 443 EQRLELDSASFDAVLCTVSVQYLQSPEQVF-AEIYRVLKPGGVCIVS 580 +QRL S SFD C+ + + ++ AE+ R+L+PGG I+S Sbjct: 280 KQRLPYPSRSFDMAHCSRCLIPWHEFDGIYLAEVDRILRPGGYWILS 326
>AK073237:Os10g0510400 | Length = 634 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +2 Query: 443 EQRLELDSASFDAVLCTVSVQYLQSPEQVF-AEIYRVLKPGGVCIVS 580 +QRL S SFD C+ + + ++ AE+ R+L+PGG I+S Sbjct: 280 KQRLPYPSRSFDMAHCSRCLIPWHEFDGIYLAEVDRILRPGGYWILS 326
>AK060584:Os03g0640800 | Length = 569 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 425 VSDLNREQRLELDSASFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVSFSNRMFYE 604 + D++ E+ L+ D LCT + +Q Q FA + PGGVC+ S + YE Sbjct: 494 LQDISLEKILDDDGRK---ALCTEFPKIMQ---QGFAYL-----PGGVCVSSMGRPVSYE 542 Query: 605 KAIGAWR 625 +A+ AW+ Sbjct: 543 QAV-AWK 548
>Os02g0147100:Os02g0147100 | Length = 407 Score = 28.9 bits (63), Expect = 5.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 3 SVQSPPKQRRSKTCSALHRKRCVRRGRSCPHRDAPAARSRHR 128 + +PP++R + R R V RSCP AP R+ R Sbjct: 60 AASTPPRRRTAAIVPPRRRPRAVVPPRSCPRAAAPECRTVRR 101
>AB071807:Os01g0755500 | Length = 443 Score = 28.9 bits (63), Expect = 5.6 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 725 DAGGKSGSSSPLEALMRLFG 784 D GG SG S+P+EAL FG Sbjct: 96 DGGGSSGESTPVEALATAFG 115
>AK110157: | Length = 1041 Score = 28.9 bits (63), Expect = 5.6 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +3 Query: 27 RRSKTCSALHRKRCVRRGRSCPHRDAPAARSR 122 R S TC A R+ GRS P R AP+ R+R Sbjct: 982 RASATCVATRRRAA--SGRSSPRRSAPSCRTR 1011
>AK058570:Os01g0755500 | Length = 446 Score = 28.9 bits (63), Expect = 5.6 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 725 DAGGKSGSSSPLEALMRLFG 784 D GG SG S+P+EAL FG Sbjct: 99 DGGGSSGESTPVEALATAFG 118
>AK061479:Os05g0163100 | Length = 266 Score = 28.5 bits (62), Expect = 7.3 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Frame = +2 Query: 707 RRLPPSDAGGKSGSSSPLEA----LMRLFGQANSDP-FYAVIS 820 RR PPS +SGS+SP RLFG N P Y V+S Sbjct: 116 RRCPPSCRSRRSGSTSPARLNRNDRKRLFGMMNDLPTVYEVVS 158
>AK119870: | Length = 879 Score = 28.1 bits (61), Expect = 9.6 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 680 EGFTQPEVVRRLPPSDAGG--KSGSSSPLEALMRLFGQANSDP 802 +GF P+V RR P GG GSS L +L + A DP Sbjct: 425 DGFALPDVPRRTPGGGNGGGHGEGSSFDLPSLETIAASAFEDP 467
>AK069137: | Length = 527 Score = 28.1 bits (61), Expect = 9.6 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = +2 Query: 470 SFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 +FD + ++ ++Q +F ++ LKPGG ++S Sbjct: 385 TFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLIS 421
>AY551100:Os01g0695100 | Length = 499 Score = 28.1 bits (61), Expect = 9.6 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = +2 Query: 470 SFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 +FD + ++ ++Q +F ++ LKPGG ++S Sbjct: 357 TFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLIS 393
>AK102037:Os01g0695100 | Length = 444 Score = 28.1 bits (61), Expect = 9.6 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = +2 Query: 470 SFDAVLCTVSVQYLQSPEQVFAEIYRVLKPGGVCIVS 580 +FD + ++ ++Q +F ++ LKPGG ++S Sbjct: 357 TFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLIS 393 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,660,162 Number of extensions: 462679 Number of successful extensions: 1788 Number of sequences better than 10.0: 36 Number of HSP's gapped: 1784 Number of HSP's successfully gapped: 36 Length of query: 321 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 220 Effective length of database: 11,355,714 Effective search space: 2498257080 Effective search space used: 2498257080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
