ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001063972.1| Oryza sativa (japonica cultivar-group) Os06g0297600 (Os06g0297600) mRNA, complete cds Length = 2357 Score = 442 bits (223), Expect = e-120 Identities = 367/415 (88%) Strand = Plus / Plus Query: 243 gcggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctggccggg 302 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | Sbjct: 117 gcggcggcggccggcgattcatcaagcgcaaggacagcgacgccggcgaggctggtcgag 176 Query: 303 caatggaggagctgagaggttctctctacaatgaattccatacttcggaaggggctaagc 362 || ||||||||||||| ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 177 cactggaggagctgaggggttcactctacaatgaatttcatacttcagaaggggccaagc 236 Query: 363 ggcagcagcagaggttttgtggcccgggtgttgcgctaacattcaactttgtggtttctg 422 | ||||||||||||||||| || || ||||||| || |||||||||||| | ||| ||| Sbjct: 237 gccagcagcagaggttttgcggaccaagtgttgcactgacattcaacttttttgttgctg 296 Query: 423 ttgggatcatcatggcaaacaagatggtgatgggtagggttggctttaacttcccagttg 482 | |||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||| Sbjct: 297 tcgggatcatcatggcaaacaaaatggtcatgggtgctgttgggtttaacttcccagttg 356 Query: 483 cactgtcactaattcattacatagctgcctgggtcctcatggccatcctgagggcattat 542 |||| || ||||||||||||||||||| |||||||| ||||| |||| | |||||| | Sbjct: 357 cactatccttaattcattacatagctgcttgggtcctgatggcagtcctcaaggcatttt 416 Query: 543 acttgatgcccatcgcccctccttcaaaatccactcctttctcctcattattcgctttgg 602 ||||| ||||||| || ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 417 acttgctgcccatagctcctccttcaaaatccactcctttttcctcattatttgctttgg 476 Query: 603 gtgctgtgatgtctttttccaccggacttgctaatatcagcttaaagcataatag 657 ||||||| |||||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 477 gtgctgtcatgtctttttccactggcctagctaacatcagtttgaagcataatag 531 Score = 238 bits (120), Expect = 5e-59 Identities = 255/300 (85%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1840 gcaacctctgctcttgctcatgttgtgctaggccaattcaagactattgtcataatgctc 1899 Query: 1151 tctgggtttctggtatttaaatctgatcctggactcaccagtctttatggagctgtcatt 1210 ||| | | |||||||||| |||||||||||| |||||||||||| |||||| | ||| Sbjct: 1900 tctagttacttggtatttaactctgatcctggattcaccagtctttgcggagctataatt 1959 Query: 1211 gcactaggaggcatgtcagtctacacttacctagggctaaaagagtcaaccaccggtggt 1270 || || |||||||||||||||||||||||||||||||| ||||| || ||| |||||| Sbjct: 1960 gctcttggaggcatgtcagtctacacttacctagggctgaaagaatctgccagtggtggt 2019 Query: 1271 aagagaattgcatcaacgtctaggcagagttctccctcactgaagtccaaggttataata 1330 |||||| | | ||||| || ||||| | |||| | ||||||||||||||||| || Sbjct: 2020 aagagagctccttcaacatccaggcaaaactctcatttgctgaagtccaaggttattgta 2079 Query: 1331 gacggagaaaagccagaaacaacacctgtggactctgtctaagttgaagaattgccattt 1390 || ||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||| Sbjct: 2080 gatggagaaaagccagaaacaaggcctattgattctgtttaagttgaagaattgccattt 2139 Score = 204 bits (103), Expect = 7e-49 Identities = 154/171 (90%) Strand = Plus / Plus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||| | | | | ||||||| |||||||||||||||||| ||||||||||| | Sbjct: 846 aggttatcacattggctgtcgtgtcatgtggtgtggctgtagcaaccgttactgatttag 905 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 |||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| |||||| Sbjct: 906 agttcaacctttttggtgcttgtgtagcggtagcttggattattcctagcgctgtaaaca 965 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 ||||| | ||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 966 agatcttgtggtcaaatttacaacagagtggaaactggactgctcttgcgt 1016 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Plus Query: 919 gttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgat 978 |||||||||||||||||||||||| || | |||||||| ||||| ||||||| || | Sbjct: 1095 gttgatgtggaagacaaccccaataactgtgtttttctttcttgttttgatgccattatt 1154 Query: 979 ggatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcat 1038 |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| || || Sbjct: 1155 ggatcctccgggcttgttgtctttcaactggaatatccagaacagcagtgcaatcatgat 1214 Query: 1039 atctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 1215 atctgctttgtttggttttcttcttcagtggtctggtgctttggcacttgg 1265 Score = 107 bits (54), Expect = 1e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| ||||||||||||||||||||||||||||| ||||| || || |||||||| Sbjct: 617 agtgtaggattttatcaaatggctaagatagctgtaaccccaacaattgtagcagcagag 676 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||||||| ||||||||| || ||| |||||||||| Sbjct: 677 tttattcttttcaagaaaaaagtttcccttcgaaaggt 714 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 200 gctgatgcggcggcggcaatgggagtatgggagttcatcctgcgcggcggcgg 252 ||||||||||||||||||||||| || ||||| | |||||||||||||||||| Sbjct: 62 gctgatgcggcggcggcaatgggcgtctgggactccatcctgcgcggcggcgg 114
>dbj|AK067425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C17, full insert sequence Length = 2359 Score = 442 bits (223), Expect = e-120 Identities = 367/415 (88%) Strand = Plus / Plus Query: 243 gcggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctggccggg 302 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | Sbjct: 120 gcggcggcggccggcgattcatcaagcgcaaggacagcgacgccggcgaggctggtcgag 179 Query: 303 caatggaggagctgagaggttctctctacaatgaattccatacttcggaaggggctaagc 362 || ||||||||||||| ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 180 cactggaggagctgaggggttcactctacaatgaatttcatacttcagaaggggccaagc 239 Query: 363 ggcagcagcagaggttttgtggcccgggtgttgcgctaacattcaactttgtggtttctg 422 | ||||||||||||||||| || || ||||||| || |||||||||||| | ||| ||| Sbjct: 240 gccagcagcagaggttttgcggaccaagtgttgcactgacattcaacttttttgttgctg 299 Query: 423 ttgggatcatcatggcaaacaagatggtgatgggtagggttggctttaacttcccagttg 482 | |||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||| Sbjct: 300 tcgggatcatcatggcaaacaaaatggtcatgggtgctgttgggtttaacttcccagttg 359 Query: 483 cactgtcactaattcattacatagctgcctgggtcctcatggccatcctgagggcattat 542 |||| || ||||||||||||||||||| |||||||| ||||| |||| | |||||| | Sbjct: 360 cactatccttaattcattacatagctgcttgggtcctgatggcagtcctcaaggcatttt 419 Query: 543 acttgatgcccatcgcccctccttcaaaatccactcctttctcctcattattcgctttgg 602 ||||| ||||||| || ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 420 acttgctgcccatagctcctccttcaaaatccactcctttttcctcattatttgctttgg 479 Query: 603 gtgctgtgatgtctttttccaccggacttgctaatatcagcttaaagcataatag 657 ||||||| |||||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 480 gtgctgtcatgtctttttccactggcctagctaacatcagtttgaagcataatag 534 Score = 238 bits (120), Expect = 5e-59 Identities = 255/300 (85%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1841 gcaacctctgctcttgctcatgttgtgctaggccaattcaagactattgtcataatgctc 1900 Query: 1151 tctgggtttctggtatttaaatctgatcctggactcaccagtctttatggagctgtcatt 1210 ||| | | |||||||||| |||||||||||| |||||||||||| |||||| | ||| Sbjct: 1901 tctagttacttggtatttaactctgatcctggattcaccagtctttgcggagctataatt 1960 Query: 1211 gcactaggaggcatgtcagtctacacttacctagggctaaaagagtcaaccaccggtggt 1270 || || |||||||||||||||||||||||||||||||| ||||| || ||| |||||| Sbjct: 1961 gctcttggaggcatgtcagtctacacttacctagggctgaaagaatctgccagtggtggt 2020 Query: 1271 aagagaattgcatcaacgtctaggcagagttctccctcactgaagtccaaggttataata 1330 |||||| | | ||||| || ||||| | |||| | ||||||||||||||||| || Sbjct: 2021 aagagagctccttcaacatccaggcaaaactctcatttgctgaagtccaaggttattgta 2080 Query: 1331 gacggagaaaagccagaaacaacacctgtggactctgtctaagttgaagaattgccattt 1390 || ||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||| Sbjct: 2081 gatggagaaaagccagaaacaaggcctattgattctgtttaagttgaagaattgccattt 2140 Score = 204 bits (103), Expect = 7e-49 Identities = 154/171 (90%) Strand = Plus / Plus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||| | | | | ||||||| |||||||||||||||||| ||||||||||| | Sbjct: 849 aggttatcacattggctgtcgtgtcatgtggtgtggctgtagcaaccgttactgatttag 908 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 |||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| |||||| Sbjct: 909 agttcaacctttttggtgcttgtgtagcggtagcttggattattcctagcgctgtaaaca 968 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 ||||| | ||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 969 agatcttgtggtcaaatttacaacagagtggaaactggactgctcttgcgt 1019 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Plus Query: 919 gttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgat 978 |||||||||||||||||||||||| || | |||||||| ||||| ||||||| || | Sbjct: 1098 gttgatgtggaagacaaccccaataactgtgtttttctttcttgttttgatgccattatt 1157 Query: 979 ggatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcat 1038 |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| || || Sbjct: 1158 ggatcctccgggcttgttgtctttcaactggaatatccagaacagcagtgcaatcatgat 1217 Query: 1039 atctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 1218 atctgctttgtttggttttcttcttcagtggtctggtgctttggcacttgg 1268 Score = 107 bits (54), Expect = 1e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| ||||||||||||||||||||||||||||| ||||| || || |||||||| Sbjct: 620 agtgtaggattttatcaaatggctaagatagctgtaaccccaacaattgtagcagcagag 679 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||||||| ||||||||| || ||| |||||||||| Sbjct: 680 tttattcttttcaagaaaaaagtttcccttcgaaaggt 717 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 200 gctgatgcggcggcggcaatgggagtatgggagttcatcctgcgcggcggcgg 252 ||||||||||||||||||||| | || ||||| | |||||||||||||||||| Sbjct: 65 gctgatgcggcggcggcaatgagcgtctgggactccatcctgcgcggcggcgg 117
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 238 bits (120), Expect = 5e-59 Identities = 255/300 (85%) Strand = Plus / Minus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10873679 gcaacctctgctcttgctcatgttgtgctaggccaattcaagactattgtcataatgctc 10873620 Query: 1151 tctgggtttctggtatttaaatctgatcctggactcaccagtctttatggagctgtcatt 1210 ||| | | |||||||||| |||||||||||| |||||||||||| |||||| | ||| Sbjct: 10873619 tctagttacttggtatttaactctgatcctggattcaccagtctttgcggagctataatt 10873560 Query: 1211 gcactaggaggcatgtcagtctacacttacctagggctaaaagagtcaaccaccggtggt 1270 || || |||||||||||||||||||||||||||||||| ||||| || ||| |||||| Sbjct: 10873559 gctcttggaggcatgtcagtctacacttacctagggctgaaagaatctgccagtggtggt 10873500 Query: 1271 aagagaattgcatcaacgtctaggcagagttctccctcactgaagtccaaggttataata 1330 |||||| | | ||||| || ||||| | |||| | ||||||||||||||||| || Sbjct: 10873499 aagagagctccttcaacatccaggcaaaactctcatttgctgaagtccaaggttattgta 10873440 Query: 1331 gacggagaaaagccagaaacaacacctgtggactctgtctaagttgaagaattgccattt 1390 || ||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||| Sbjct: 10873439 gatggagaaaagccagaaacaaggcctattgattctgtttaagttgaagaattgccattt 10873380 Score = 208 bits (105), Expect = 5e-50 Identities = 174/197 (88%) Strand = Plus / Minus Query: 461 gttggctttaacttcccagttgcactgtcactaattcattacatagctgcctgggtcctc 520 ||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||| Sbjct: 10875184 gttgggtttaacttcccagttgcactatccttaattcattacatagctgcttgggtcctg 10875125 Query: 521 atggccatcctgagggcattatacttgatgcccatcgcccctccttcaaaatccactcct 580 ||||| |||| | |||||| |||||| ||||||| || ||||||||||||||||||||| Sbjct: 10875124 atggcagtcctcaaggcattttacttgctgcccatagctcctccttcaaaatccactcct 10875065 Query: 581 ttctcctcattattcgctttgggtgctgtgatgtctttttccaccggacttgctaatatc 640 || ||||||||||| |||||||||||||| |||||||||||||| || || ||||| ||| Sbjct: 10875064 ttttcctcattatttgctttgggtgctgtcatgtctttttccactggcctagctaacatc 10875005 Query: 641 agcttaaagcataatag 657 || || ||||||||||| Sbjct: 10875004 agtttgaagcataatag 10874988 Score = 204 bits (103), Expect = 7e-49 Identities = 154/171 (90%) Strand = Plus / Minus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||| | | | | ||||||| |||||||||||||||||| ||||||||||| | Sbjct: 10874673 aggttatcacattggctgtcgtgtcatgtggtgtggctgtagcaaccgttactgatttag 10874614 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 |||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| |||||| Sbjct: 10874613 agttcaacctttttggtgcttgtgtagcggtagcttggattattcctagcgctgtaaaca 10874554 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 ||||| | ||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 10874553 agatcttgtggtcaaatttacaacagagtggaaactggactgctcttgcgt 10874503 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 919 gttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgat 978 |||||||||||||||||||||||| || | |||||||| ||||| ||||||| || | Sbjct: 10874424 gttgatgtggaagacaaccccaataactgtgtttttctttcttgttttgatgccattatt 10874365 Query: 979 ggatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcat 1038 |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| || || Sbjct: 10874364 ggatcctccgggcttgttgtctttcaactggaatatccagaacagcagtgcaatcatgat 10874305 Query: 1039 atctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 10874304 atctgctttgtttggttttcttcttcagtggtctggtgctttggcacttgg 10874254 Score = 153 bits (77), Expect = 2e-33 Identities = 128/145 (88%) Strand = Plus / Minus Query: 306 tggaggagctgagaggttctctctacaatgaattccatacttcggaaggggctaagcggc 365 ||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| | Sbjct: 10875425 tggaggagctgaggggttcactctacaatgaatttcatacttcagaaggggccaagcgcc 10875366 Query: 366 agcagcagaggttttgtggcccgggtgttgcgctaacattcaactttgtggtttctgttg 425 |||||||||||||||| || || ||||||| || |||||||||||| | ||| |||| | Sbjct: 10875365 agcagcagaggttttgcggaccaagtgttgcactgacattcaacttttttgttgctgtcg 10875306 Query: 426 ggatcatcatggcaaacaagatggt 450 ||||||||||||||||||| ||||| Sbjct: 10875305 ggatcatcatggcaaacaaaatggt 10875281 Score = 107 bits (54), Expect = 1e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| ||||||||||||||||||||||||||||| ||||| || || |||||||| Sbjct: 10874902 agtgtaggattttatcaaatggctaagatagctgtaaccccaacaattgtagcagcagag 10874843 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||||||| ||||||||| || ||| |||||||||| Sbjct: 10874842 tttattcttttcaagaaaaaagtttcccttcgaaaggt 10874805 Score = 101 bits (51), Expect = 8e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 243 gcggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10876726 gcggcggcggccggcgattcatcaagcgcaaggacagcgacgccggcgaggctgg 10876672 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 200 gctgatgcggcggcggcaatgggagtatgggagttcatcctgcgcggcggcgg 252 ||||||||||||||||||||||| || ||||| | |||||||||||||||||| Sbjct: 10876781 gctgatgcggcggcggcaatgggcgtctgggactccatcctgcgcggcggcgg 10876729
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 238 bits (120), Expect = 5e-59 Identities = 255/300 (85%) Strand = Plus / Minus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100045 gcaacctctgctcttgctcatgttgtgctaggccaattcaagactattgtcataatgctc 99986 Query: 1151 tctgggtttctggtatttaaatctgatcctggactcaccagtctttatggagctgtcatt 1210 ||| | | |||||||||| |||||||||||| |||||||||||| |||||| | ||| Sbjct: 99985 tctagttacttggtatttaactctgatcctggattcaccagtctttgcggagctataatt 99926 Query: 1211 gcactaggaggcatgtcagtctacacttacctagggctaaaagagtcaaccaccggtggt 1270 || || |||||||||||||||||||||||||||||||| ||||| || ||| |||||| Sbjct: 99925 gctcttggaggcatgtcagtctacacttacctagggctgaaagaatctgccagtggtggt 99866 Query: 1271 aagagaattgcatcaacgtctaggcagagttctccctcactgaagtccaaggttataata 1330 |||||| | | ||||| || ||||| | |||| | ||||||||||||||||| || Sbjct: 99865 aagagagctccttcaacatccaggcaaaactctcatttgctgaagtccaaggttattgta 99806 Query: 1331 gacggagaaaagccagaaacaacacctgtggactctgtctaagttgaagaattgccattt 1390 || ||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||| Sbjct: 99805 gatggagaaaagccagaaacaaggcctattgattctgtttaagttgaagaattgccattt 99746 Score = 208 bits (105), Expect = 5e-50 Identities = 174/197 (88%) Strand = Plus / Minus Query: 461 gttggctttaacttcccagttgcactgtcactaattcattacatagctgcctgggtcctc 520 ||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||| Sbjct: 101550 gttgggtttaacttcccagttgcactatccttaattcattacatagctgcttgggtcctg 101491 Query: 521 atggccatcctgagggcattatacttgatgcccatcgcccctccttcaaaatccactcct 580 ||||| |||| | |||||| |||||| ||||||| || ||||||||||||||||||||| Sbjct: 101490 atggcagtcctcaaggcattttacttgctgcccatagctcctccttcaaaatccactcct 101431 Query: 581 ttctcctcattattcgctttgggtgctgtgatgtctttttccaccggacttgctaatatc 640 || ||||||||||| |||||||||||||| |||||||||||||| || || ||||| ||| Sbjct: 101430 ttttcctcattatttgctttgggtgctgtcatgtctttttccactggcctagctaacatc 101371 Query: 641 agcttaaagcataatag 657 || || ||||||||||| Sbjct: 101370 agtttgaagcataatag 101354 Score = 204 bits (103), Expect = 7e-49 Identities = 154/171 (90%) Strand = Plus / Minus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||| | | | | ||||||| |||||||||||||||||| ||||||||||| | Sbjct: 101039 aggttatcacattggctgtcgtgtcatgtggtgtggctgtagcaaccgttactgatttag 100980 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 |||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| |||||| Sbjct: 100979 agttcaacctttttggtgcttgtgtagcggtagcttggattattcctagcgctgtaaaca 100920 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 ||||| | ||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 100919 agatcttgtggtcaaatttacaacagagtggaaactggactgctcttgcgt 100869 Score = 196 bits (99), Expect = 2e-46 Identities = 153/171 (89%) Strand = Plus / Minus Query: 919 gttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgat 978 |||||||||||||||||||||||| || | |||||||| ||||| ||||||| || | Sbjct: 100790 gttgatgtggaagacaaccccaataactgtgtttttctttcttgttttgatgccattatt 100731 Query: 979 ggatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcat 1038 |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| || || Sbjct: 100730 ggatcctccgggcttgttgtctttcaactggaatatccagaacagcagtgcaatcatgat 100671 Query: 1039 atctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 |||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 100670 atctgctttgtttggttttcttcttcagtggtctggtgctttggcacttgg 100620 Score = 153 bits (77), Expect = 2e-33 Identities = 128/145 (88%) Strand = Plus / Minus Query: 306 tggaggagctgagaggttctctctacaatgaattccatacttcggaaggggctaagcggc 365 ||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| | Sbjct: 101791 tggaggagctgaggggttcactctacaatgaatttcatacttcagaaggggccaagcgcc 101732 Query: 366 agcagcagaggttttgtggcccgggtgttgcgctaacattcaactttgtggtttctgttg 425 |||||||||||||||| || || ||||||| || |||||||||||| | ||| |||| | Sbjct: 101731 agcagcagaggttttgcggaccaagtgttgcactgacattcaacttttttgttgctgtcg 101672 Query: 426 ggatcatcatggcaaacaagatggt 450 ||||||||||||||||||| ||||| Sbjct: 101671 ggatcatcatggcaaacaaaatggt 101647 Score = 107 bits (54), Expect = 1e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| ||||||||||||||||||||||||||||| ||||| || || |||||||| Sbjct: 101268 agtgtaggattttatcaaatggctaagatagctgtaaccccaacaattgtagcagcagag 101209 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||||||| ||||||||| || ||| |||||||||| Sbjct: 101208 tttattcttttcaagaaaaaagtttcccttcgaaaggt 101171 Score = 101 bits (51), Expect = 8e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 243 gcggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103092 gcggcggcggccggcgattcatcaagcgcaaggacagcgacgccggcgaggctgg 103038 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 200 gctgatgcggcggcggcaatgggagtatgggagttcatcctgcgcggcggcgg 252 ||||||||||||||||||||||| || ||||| | |||||||||||||||||| Sbjct: 103147 gctgatgcggcggcggcaatgggcgtctgggactccatcctgcgcggcggcgg 103095
>ref|NM_001054513.1| Oryza sativa (japonica cultivar-group) Os02g0724500 (Os02g0724500) mRNA, complete cds Length = 1188 Score = 196 bits (99), Expect = 2e-46 Identities = 222/263 (84%) Strand = Plus / Plus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| |||||||||||||||||||| |||||||||||||| || |||| || ||| Sbjct: 664 agtgtaggtttttatcaaatggctaagattgctgtaactccaacaattgttgtggctgaa 723 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggttatcacactagttatagtgtca 775 ||||| || || ||||||| || |||| || ||||||||||||||| | || |||||| Sbjct: 724 tttatgattttccagaaaagggtttcctctcaaaaggttatcacactggcaattgtgtca 783 Query: 776 tttggtgtggctgtagcaactgttactgatttggagttcaacttttttggtgcttgtgta 835 ||||| ||||| ||||| |||||||||||| | |||||||| || || |||||| |||| Sbjct: 784 tttggagtggccgtagccactgttactgatctagagttcaatttcttcggtgctgttgta 843 Query: 836 gcagtagcttggatcattcctagtgctataaacaagatcctctggtcaaatctgcaacag 895 ||| | |||||||| |||||||||| ||||||| || || ||||||||| |||||||| Sbjct: 844 gcattggcttggattgttcctagtgcagtaaacaaaattctatggtcaaatttgcaacag 903 Query: 896 agtggaaactggactgctcttgc 918 |||||||| |||||||| ||||| Sbjct: 904 agtggaaattggactgcccttgc 926 Score = 123 bits (62), Expect = 2e-24 Identities = 146/174 (83%) Strand = Plus / Plus Query: 329 tacaatgaattccatacttcggaaggggctaagcggcagcagcagaggttttgtggcccg 388 ||||||||| | |||| || |||||||| ||||| ||||||||| |||| ||||| || Sbjct: 340 tacaatgaaatgcatagctcagaaggggccaagcgacagcagcagcggttctgtggacca 399 Query: 389 ggtgttgcgctaacattcaactttgtggtttctgttgggatcatcatggcaaacaagatg 448 ||||||| || ||||| || |||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 400 agtgttgcactgacatttaattttgctgttgctgttggtatcatcatggcaaacaaaatg 459 Query: 449 gtgatgggtagggttggctttaacttcccagttgcactgtcactaattcattac 502 |||||||| || ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct: 460 gtgatggggagtgttgggtttaagttcccaattgcactatcgctaattcattac 513 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 560 cctccttcaaaatccactcctttctcctcattattcgctttgggtgctgtgatgtctttt 619 |||||||| |||||||| |||||||| || ||||| |||||||||||||| |||||| | Sbjct: 571 cctccttctaaatccacacctttctcttctttatttgctttgggtgctgtaatgtctctc 630 Query: 620 tccaccggacttgctaata 638 ||||| || |||||||||| Sbjct: 631 tccactgggcttgctaata 649 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 ||||| ||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 928 gcaacatcagctctgtcacacgttgtgctggggcaattcaagaccatagtcataatgctc 987 Query: 1151 tc 1152 || Sbjct: 988 tc 989 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 244 cggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||| || | ||| ||||| | ||||||||||||||||||||| |||| Sbjct: 27 cggcggcggcaggaggttcctcaagaggaaggacagcgacgccggcgagactgg 80
>emb|AJ293504.1|SHY293504 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR33 Length = 948 Score = 172 bits (87), Expect = 3e-39 Identities = 149/171 (87%) Strand = Plus / Minus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 |||||||||| || ||| | || |||||||||||||| | ||||||||||||||||||| Sbjct: 819 aggttatcacgctggttgttgtctcatttggtgtggccattgcaactgttactgatttgg 760 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 ||||||| ||||||||||||||||||||| || ||||||| ||||| ||||| |||||| Sbjct: 759 agttcaatttttttggtgcttgtgtagcactatcttggattattccnagtgcngtaaaca 700 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 | ||||| ||||||||| | ||||||||||||||| |||| || ||||||| Sbjct: 699 aaatcctgtggtcaaatttacaacagagtggaaacnggacagcncttgcgt 649 Score = 139 bits (70), Expect = 4e-29 Identities = 141/165 (85%) Strand = Plus / Minus Query: 923 atgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgatggat 982 |||||||||||||| |||||||| |||||| | | |||| ||||||| ||| ||||| Sbjct: 564 atgtggaagacaacaccaattaccatatttgtncttattgttttgatgccattgttggat 505 Query: 983 cctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcatatct 1042 ||||| || | || |||||||||||| ||||||| |||||| | ||||||||||||||| Sbjct: 504 cctccaggccttttatctttcaactgggatttcaaaaacagcagcgcaattatcatatct 445 Query: 1043 gctttgcttggttttcttcttcagtggtccggtgctttggcactt 1087 |||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 444 gctttgttcggtttccttcttcagtggtctggtgctttggcactt 400
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 133 bits (67), Expect = 2e-27 Identities = 145/171 (84%) Strand = Plus / Plus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||||| | || ||||||||||| ||||| ||||| |||||||||||| | | Sbjct: 30126368 aggttatcacactggcaattgtgtcatttggagtggccgtagccactgttactgatctag 30126427 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 ||||||| || || |||||| ||||||| | |||||||| |||||||||| |||||| Sbjct: 30126428 agttcaatttcttcggtgctgttgtagcattggcttggattgttcctagtgcagtaaaca 30126487 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 | || || ||||||||| |||||||||||||||| |||||||| ||||||| Sbjct: 30126488 aaattctatggtcaaatttgcaacagagtggaaattggactgcccttgcgt 30126538 Score = 91.7 bits (46), Expect = 7e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 560 cctccttcaaaatccactcctttctcctcattattcgctttgggtgctgtgatgtctttt 619 |||||||| |||||||| |||||||| || ||||| |||||||||||||| |||||| | Sbjct: 30125819 cctccttctaaatccacacctttctcttctttatttgctttgggtgctgtaatgtctctc 30125878 Query: 620 tccaccggacttgctaatatcagcttaaagcataatag 657 ||||| || ||||||||| | |||||||| |||||||| Sbjct: 30125879 tccactgggcttgctaatgtgagcttaaaacataatag 30125916 Score = 83.8 bits (42), Expect = 2e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 920 ttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgatg 979 ||||||||||||||||| || | |||||||||||||| | | |||||||||||| || Sbjct: 30126611 ttgatgtggaagacaactccggtcacgatatttttcttattggcactgatgcctttgttg 30126670 Query: 980 gatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcata 1039 ||||| ||||| ||| || || ||||||| |||| |||||||| || |||||||| Sbjct: 30126671 gatcccccgggcttgctgctgtttgactggaacttcaggaacagcttagctattatcatt 30126730 Query: 1040 tctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 ||||||||| |||| || || || || ||||| || |||||||||||||| Sbjct: 30126731 tctgctttgtttggcttcctactccaatggtctggcgctttggcacttgg 30126780 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 329 tacaatgaattccatacttcggaaggggctaagcggcagcagcagaggttttgtggcccg 388 ||||||||| | |||| || |||||||| ||||| ||||||||| |||| ||||| || Sbjct: 30125470 tacaatgaaatgcatagctcagaaggggccaagcgacagcagcagcggttctgtggacca 30125529 Query: 389 ggtgttgcgctaacattcaactttgtggtttctgttgggatcatcatggcaaacaagatg 448 ||||||| || ||||| || |||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 30125530 agtgttgcactgacatttaattttgctgttgctgttggtatcatcatggcaaacaaaatg 30125589 Query: 449 gt 450 || Sbjct: 30125590 gt 30125591 Score = 75.8 bits (38), Expect = 4e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| |||||||||||||||||||| |||||||||||||| || |||| || ||| Sbjct: 30126016 agtgtaggtttttatcaaatggctaagattgctgtaactccaacaattgttgtggctgaa 30126075 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||| || || ||||||| || |||| || |||||| Sbjct: 30126076 tttatgattttccagaaaagggtttcctctcaaaaggt 30126113 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 ||||| ||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 30127924 gcaacatcagctctgtcacacgttgtgctggggcaattcaagaccatagtcataatgctc 30127983 Query: 1151 tc 1152 || Sbjct: 30127984 tc 30127985 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 448 ggtgatgggtagggttggctttaacttcccagttgcactgtcactaattcattac 502 ||||||||| || ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct: 30125707 ggtgatggggagtgttgggtttaagttcccaattgcactatcgctaattcattac 30125761 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 244 cggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||| || | ||| ||||| | ||||||||||||||||||||| |||| Sbjct: 30124306 cggcggcggcaggaggttcctcaagaggaaggacagcgacgccggcgagactgg 30124359
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 133 bits (67), Expect = 2e-27 Identities = 145/171 (84%) Strand = Plus / Plus Query: 750 aggttatcacactagttatagtgtcatttggtgtggctgtagcaactgttactgatttgg 809 ||||||||||||| | || ||||||||||| ||||| ||||| |||||||||||| | | Sbjct: 105965 aggttatcacactggcaattgtgtcatttggagtggccgtagccactgttactgatctag 106024 Query: 810 agttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagtgctataaaca 869 ||||||| || || |||||| ||||||| | |||||||| |||||||||| |||||| Sbjct: 106025 agttcaatttcttcggtgctgttgtagcattggcttggattgttcctagtgcagtaaaca 106084 Query: 870 agatcctctggtcaaatctgcaacagagtggaaactggactgctcttgcgt 920 | || || ||||||||| |||||||||||||||| |||||||| ||||||| Sbjct: 106085 aaattctatggtcaaatttgcaacagagtggaaattggactgcccttgcgt 106135 Score = 91.7 bits (46), Expect = 7e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 560 cctccttcaaaatccactcctttctcctcattattcgctttgggtgctgtgatgtctttt 619 |||||||| |||||||| |||||||| || ||||| |||||||||||||| |||||| | Sbjct: 105416 cctccttctaaatccacacctttctcttctttatttgctttgggtgctgtaatgtctctc 105475 Query: 620 tccaccggacttgctaatatcagcttaaagcataatag 657 ||||| || ||||||||| | |||||||| |||||||| Sbjct: 105476 tccactgggcttgctaatgtgagcttaaaacataatag 105513 Score = 83.8 bits (42), Expect = 2e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 920 ttgatgtggaagacaaccccaattacgatatttttcttccttgtcctgatgcctttgatg 979 ||||||||||||||||| || | |||||||||||||| | | |||||||||||| || Sbjct: 106208 ttgatgtggaagacaactccggtcacgatatttttcttattggcactgatgcctttgttg 106267 Query: 980 gatcctccgggattgttgtctttcaactggaatttcaagaacagctgtgcaattatcata 1039 ||||| ||||| ||| || || ||||||| |||| |||||||| || |||||||| Sbjct: 106268 gatcccccgggcttgctgctgtttgactggaacttcaggaacagcttagctattatcatt 106327 Query: 1040 tctgctttgcttggttttcttcttcagtggtccggtgctttggcacttgg 1089 ||||||||| |||| || || || || ||||| || |||||||||||||| Sbjct: 106328 tctgctttgtttggcttcctactccaatggtctggcgctttggcacttgg 106377 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 329 tacaatgaattccatacttcggaaggggctaagcggcagcagcagaggttttgtggcccg 388 ||||||||| | |||| || |||||||| ||||| ||||||||| |||| ||||| || Sbjct: 105067 tacaatgaaatgcatagctcagaaggggccaagcgacagcagcagcggttctgtggacca 105126 Query: 389 ggtgttgcgctaacattcaactttgtggtttctgttgggatcatcatggcaaacaagatg 448 ||||||| || ||||| || |||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 105127 agtgttgcactgacatttaattttgctgttgctgttggtatcatcatggcaaacaaaatg 105186 Query: 449 gt 450 || Sbjct: 105187 gt 105188 Score = 75.8 bits (38), Expect = 4e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 656 agtgtagggttttatcaaatggctaagatagctgtaactccaaccatagttgcagcagaa 715 |||||||| |||||||||||||||||||| |||||||||||||| || |||| || ||| Sbjct: 105613 agtgtaggtttttatcaaatggctaagattgctgtaactccaacaattgttgtggctgaa 105672 Query: 716 tttattcttctcaagaaaagtgtctcctttcgaaaggt 753 ||||| || || ||||||| || |||| || |||||| Sbjct: 105673 tttatgattttccagaaaagggtttcctctcaaaaggt 105710 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 ||||| ||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 107521 gcaacatcagctctgtcacacgttgtgctggggcaattcaagaccatagtcataatgctc 107580 Query: 1151 tc 1152 || Sbjct: 107581 tc 107582 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 448 ggtgatgggtagggttggctttaacttcccagttgcactgtcactaattcattac 502 ||||||||| || ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct: 105304 ggtgatggggagtgttgggtttaagttcccaattgcactatcgctaattcattac 105358 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 244 cggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||| || | ||| ||||| | ||||||||||||||||||||| |||| Sbjct: 103903 cggcggcggcaggaggttcctcaagaggaaggacagcgacgccggcgagactgg 103956
>emb|CT829594.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI007D13, full insert sequence Length = 586 Score = 101 bits (51), Expect = 8e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 243 gcggcggcggccggcgcttcatcaagcgcaaggacagcgacgccggcgaggctgg 297 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122 gcggcggcggccggcgattcatcaagcgcaaggacagcgacgccggcgaggctgg 176 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 200 gctgatgcggcggcggcaatgggagtatgggagttcatcctgcgcggcggcgg 252 ||||||||||||||||||||||| || ||||| | |||||||||||||||||| Sbjct: 67 gctgatgcggcggcggcaatgggcgtctgggactccatcctgcgcggcggcgg 119
>gb|AC186731.2| Medicago truncatula chromosome 2 BAC clone mth2-84a4, complete sequence Length = 91342 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 800 actgatttggagttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagt 859 |||||| || ||||| | || |||||||||||||||||| | || |||||||| || ||| Sbjct: 90684 actgatctgcagttccatttatttggtgcttgtgtagcattggcatggatcataccgagt 90625 Query: 860 gctataaacaagatcctctggtc 882 ||| |||| |||||||||||||| Sbjct: 90624 gctgtaaataagatcctctggtc 90602
>gb|AC155895.2| Medicago truncatula chromosome 2 BAC clone mth2-82i6, complete sequence Length = 131083 Score = 69.9 bits (35), Expect = 3e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 800 actgatttggagttcaacttttttggtgcttgtgtagcagtagcttggatcattcctagt 859 |||||| || ||||| | || |||||||||||||||||| | || |||||||| || ||| Sbjct: 91644 actgatctgcagttccatttatttggtgcttgtgtagcattggcatggatcataccgagt 91703 Query: 860 gctataaacaagatcctctggtc 882 ||| |||| |||||||||||||| Sbjct: 91704 gctgtaaataagatcctctggtc 91726
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1091 gcaacctcagctctgtctcatgttgtgcttggccaattcaagactattgtcataatgctc 1150 ||||| ||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 628 gcaacatcagctctgtcacacgttgtgctggggcaattcaagaccatagtcataatgctc 687 Query: 1151 tc 1152 || Sbjct: 688 tc 689
>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE Length = 165916 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 404 ttcaactttgtggtttctgttgggatcatcatggcaaacaa 444 |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 83476 ttcaacttcatggttgctgttgggatcatcatggcaaacaa 83516 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 671 caaatggctaagatagctgtaactccaac 699 |||||||||||||| ||||| |||||||| Sbjct: 84174 caaatggctaagattgctgttactccaac 84202
>dbj|AK228116.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-59-H12 Length = 1603 Score = 52.0 bits (26), Expect = 0.006 Identities = 89/110 (80%) Strand = Plus / Plus Query: 821 tttggtgcttgtgtagcagtagcttggatcattcctagtgctataaacaagatcctctgg 880 |||||||||||||||||| | || |||||||| || || || | ||||| ||| | ||| Sbjct: 783 tttggtgcttgtgtagcattcgcatggatcataccaagcgcaactaacaaaatcttgtgg 842 Query: 881 tcaaatctgcaacagagtggaaactggactgctcttgcgttgatgtggaa 930 || ||| |||| || | | ||||||||||||| | |||||||||||||| Sbjct: 843 tctaatatgcagcaacgagaaaactggactgctttggcgttgatgtggaa 892
>ref|NM_125092.2| Arabidopsis thaliana unknown protein (AT5G57100) mRNA, complete cds Length = 1592 Score = 52.0 bits (26), Expect = 0.006 Identities = 89/110 (80%) Strand = Plus / Plus Query: 821 tttggtgcttgtgtagcagtagcttggatcattcctagtgctataaacaagatcctctgg 880 |||||||||||||||||| | || |||||||| || || || | ||||| ||| | ||| Sbjct: 783 tttggtgcttgtgtagcattcgcatggatcataccaagcgcaactaacaaaatcttgtgg 842 Query: 881 tcaaatctgcaacagagtggaaactggactgctcttgcgttgatgtggaa 930 || ||| |||| || | | ||||||||||||| | |||||||||||||| Sbjct: 843 tctaatatgcagcaacgagaaaactggactgctttggcgttgatgtggaa 892
>gb|AY085537.1| Arabidopsis thaliana clone 156439 mRNA, complete sequence Length = 1331 Score = 52.0 bits (26), Expect = 0.006 Identities = 89/110 (80%) Strand = Plus / Plus Query: 821 tttggtgcttgtgtagcagtagcttggatcattcctagtgctataaacaagatcctctgg 880 |||||||||||||||||| | || |||||||| || || || | ||||| ||| | ||| Sbjct: 704 tttggtgcttgtgtagcattcgcatggatcataccaagcgcaactaacaaaatcttgtgg 763 Query: 881 tcaaatctgcaacagagtggaaactggactgctcttgcgttgatgtggaa 930 || ||| |||| || | | ||||||||||||| | |||||||||||||| Sbjct: 764 tctaatatgcagcaacgagaaaactggactgctttggcgttgatgtggaa 813
>gb|BT003153.1| Arabidopsis thaliana At5g57100 mRNA, complete cds Length = 1173 Score = 52.0 bits (26), Expect = 0.006 Identities = 89/110 (80%) Strand = Plus / Plus Query: 821 tttggtgcttgtgtagcagtagcttggatcattcctagtgctataaacaagatcctctgg 880 |||||||||||||||||| | || |||||||| || || || | ||||| ||| | ||| Sbjct: 625 tttggtgcttgtgtagcattcgcatggatcataccaagcgcaactaacaaaatcttgtgg 684 Query: 881 tcaaatctgcaacagagtggaaactggactgctcttgcgttgatgtggaa 930 || ||| |||| || | | ||||||||||||| | |||||||||||||| Sbjct: 685 tctaatatgcagcaacgagaaaactggactgctttggcgttgatgtggaa 734
>emb|BX831517.1|CNS0A0VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1461 Score = 52.0 bits (26), Expect = 0.006 Identities = 89/110 (80%) Strand = Plus / Plus Query: 821 tttggtgcttgtgtagcagtagcttggatcattcctagtgctataaacaagatcctctgg 880 |||||||||||||||||| | || |||||||| || || || | ||||| ||| | ||| Sbjct: 774 tttggtgcttgtgtagcattcgcatggatcataccaagcgcaactaacaaaatcttgtgg 833 Query: 881 tcaaatctgcaacagagtggaaactggactgctcttgcgttgatgtggaa 930 || ||| |||| || | | ||||||||||||| | |||||||||||||| Sbjct: 834 tctaatatgcagcaacgagaaaactggactgctttggcgttgatgtggaa 883
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1045 tttgcttggttttcttcttcagt 1067 ||||||||||||||||||||||| Sbjct: 27858 tttgcttggttttcttcttcagt 27836
>gb|AC000392.1|AC000392 Genomic sequence from Human 9q34, complete sequence Length = 44266 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1045 tttgcttggttttcttcttcagt 1067 ||||||||||||||||||||||| Sbjct: 41521 tttgcttggttttcttcttcagt 41543
>ref|NM_011787.2| Mus musculus autocrine motility factor receptor (Amfr), mRNA Length = 3694 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1834 agttctacctcactgaagtccaaggt 1809
>ref|XM_990903.1| PREDICTED: Mus musculus autocrine motility factor receptor (Amfr), mRNA Length = 3272 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1433 agttctacctcactgaagtccaaggt 1408
>ref|NM_104510.1| Arabidopsis thaliana 3'-5' exonuclease/ nucleic acid binding (AT1G56310) mRNA, complete cds Length = 1749 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 cccatctctctgcagcttggaa 112 |||||||||||||||||||||| Sbjct: 697 cccatctctctgcagcttggaa 676
>gb|AE009106.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 132 of 256 of the complete sequence Length = 10755 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 cggcggcggccggcgcttcatcaagc 269 |||||||||||| ||||||||||||| Sbjct: 6340 cggcggcggccgtcgcttcatcaagc 6365
>gb|BC040338.1| Mus musculus autocrine motility factor receptor, mRNA (cDNA clone MGC:11402 IMAGE:3710780), complete cds Length = 3336 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1760 agttctacctcactgaagtccaaggt 1735
>gb|BC034538.1| Mus musculus autocrine motility factor receptor, mRNA (cDNA clone MGC:19116 IMAGE:4209258), complete cds Length = 2296 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1792 agttctacctcactgaagtccaaggt 1767
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 cggcggcggccggcgcttcatcaagc 269 |||||||||||| ||||||||||||| Sbjct: 1460018 cggcggcggccgtcgcttcatcaagc 1460043
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 gcgcttcatcaagcgcaaggac 277 |||||||||||||||||||||| Sbjct: 6582235 gcgcttcatcaagcgcaaggac 6582214
>dbj|AK157327.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830211F17 product:autocrine motility factor receptor, full insert sequence Length = 3469 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1840 agttctacctcactgaagtccaaggt 1815
>dbj|AK170716.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630116B17 product:autocrine motility factor receptor, full insert sequence Length = 3334 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1820 agttctacctcactgaagtccaaggt 1795
>dbj|AK019816.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930578M22 product:hypothetical protein, full insert sequence Length = 3461 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1620 agttctacctcactgaagtccaaggt 1645
>dbj|AK038442.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230012I06 product:autocrine motility factor receptor, full insert sequence Length = 3310 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 1802 agttctacctcactgaagtccaaggt 1777
>emb|AL606662.6| Human DNA sequence from clone RP13-643D4 on chromosome X Contains a pseudogene similar to part of poly(A) polymerase alpha (PAPOLA), complete sequence Length = 84246 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1523 atatgatcctattttaggacat 1544 |||||||||||||||||||||| Sbjct: 58252 atatgatcctattttaggacat 58231
>gb|AC159639.2| Mus musculus BAC clone RP24-79M15 from chromosome 12, complete sequence Length = 220032 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 889 gcaacagagtggaaactggactgctcttgc 918 |||||| | ||||||||||||||||||||| Sbjct: 183101 gcaacaaaatggaaactggactgctcttgc 183130
>gb|BC003256.1| Mus musculus autocrine motility factor receptor, mRNA (cDNA clone IMAGE:3500628), partial cds Length = 2118 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 472 agttctacctcactgaagtccaaggt 447
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 cccatctctctgcagcttggaa 112 |||||||||||||||||||||| Sbjct: 24585 cccatctctctgcagcttggaa 24606
>dbj|AK199083.1| Mus musculus cDNA, clone:Y1G0130B20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000053766, based on BLAT search Length = 388 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 346 agttctacctcactgaagtccaaggt 321
>dbj|AK194945.1| Mus musculus cDNA, clone:Y1G0116O10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000053766, based on BLAT search Length = 271 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 152 agttctacctcactgaagtccaaggt 127
>dbj|AK190096.1| Mus musculus cDNA, clone:Y1G0101L14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000043969, based on BLAT search Length = 194 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 43 agttctacctcactgaagtccaaggt 68
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 gcggcggcggccggcgcttcat 264 |||||||||||||||||||||| Sbjct: 878612 gcggcggcggccggcgcttcat 878591
>gb|AF124144.1|AF124144 Mus musculus autocrine motility factor receptor (Amfr) mRNA, complete cds Length = 3548 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 2042 agttctacctcactgaagtccaaggt 2017
>gb|AC138118.4| Mus musculus BAC clone RP24-219A21 from 8, complete sequence Length = 168752 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1298 agttctccctcactgaagtccaaggt 1323 |||||| ||||||||||||||||||| Sbjct: 103543 agttctacctcactgaagtccaaggt 103518
>ref|NM_001070319.1| Oryza sativa (japonica cultivar-group) Os09g0536200 (Os09g0536200) mRNA, complete cds Length = 2217 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 caacttcacctgaggttaaccttat 1442 |||||||||| |||||||||||||| Sbjct: 1933 caacttcaccagaggttaaccttat 1957
>gb|DQ875873.1| Sida yellow mosaic Yucatan virus segment DNA-B, complete sequence Length = 2586 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1152 ctgggtttctggtatttaaat 1172 ||||||||||||||||||||| Sbjct: 2396 ctgggtttctggtatttaaat 2416
>gb|AC190161.1| Gallus gallus chromosome Z clone CH261-177O19, complete sequence Length = 215449 Score = 42.1 bits (21), Expect = 6.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1538 aggacattttagtaagttgttgttctccgttga 1570 |||||||||| || ||||||| ||||||||||| Sbjct: 171412 aggacattttggtcagttgttattctccgttga 171380
>ref|XM_001109338.1| PREDICTED: Macaca mulatta similar to calcium/calmodulin-dependent protein kinase IG (LOC717624), mRNA Length = 1407 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 ctgcctgggtcctcatggcca 527 ||||||||||||||||||||| Sbjct: 55 ctgcctgggtcctcatggcca 35
>ref|XM_989033.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B (Zbtb7b), mRNA Length = 1862 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 427 ccaccaccccctgttcccatc 407
>ref|XM_989056.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B, transcript variant 5 (Zbtb7b), mRNA Length = 2275 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 601 ccaccaccccctgttcccatc 581
>ref|XM_988936.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B, transcript variant 4 (Zbtb7b), mRNA Length = 2101 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 427 ccaccaccccctgttcccatc 407
>ref|XM_989096.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B, transcript variant 7 (Zbtb7b), mRNA Length = 2079 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 405 ccaccaccccctgttcccatc 385
>ref|XM_988977.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B, transcript variant 3 (Zbtb7b), mRNA Length = 2029 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 355 ccaccaccccctgttcccatc 335
>ref|XM_989013.1| PREDICTED: Mus musculus Vzinc finger and BTB domain containing 7B, transcript variant 2 (Zbtb7b), mRNA Length = 2723 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 1049 ccaccaccccctgttcccatc 1029
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 tgcgcggcggcggccggcgct 260 ||||||||||||||||||||| Sbjct: 198546 tgcgcggcggcggccggcgct 198566
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 967 gatgcctttgatggatcctcc 987 ||||||||||||||||||||| Sbjct: 1311615 gatgcctttgatggatcctcc 1311595
>ref|NM_009565.4| Mus musculus zinc finger and BTB domain containing 7B (Zbtb7b), mRNA gb|BC091651.1| Mus musculus zinc finger and BTB domain containing 7B, mRNA (cDNA clone MGC:102577 IMAGE:6309645), complete cds Length = 3704 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 408 ccaccaccccctgttcccatc 388
>gb|BC089185.1| Mus musculus zinc finger and BTB domain containing 7B, mRNA (cDNA clone IMAGE:5293616), partial cds Length = 3192 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 42 ccaccaccccctgttcccatc 22
>gb|AY029394.2| Campoletis sonorensis ichnovirus segment N, complete sequence Length = 10757 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1569 gaccatgctattataagatag 1589 ||||||||||||||||||||| Sbjct: 6423 gaccatgctattataagatag 6443
>gb|AC121079.20| Mus musculus chromosome 3, clone RP24-178P12, complete sequence Length = 177802 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 35361 ccaccaccccctgttcccatc 35381
>gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosome 5, complete sequence Length = 146575 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gggcaatggaggagctgagag 320 ||||||||||||||||||||| Sbjct: 100453 gggcaatggaggagctgagag 100473
>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete sequence Length = 168279 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggcagcagcagaggttttgtg 383 ||||||||||||||||||||| Sbjct: 33517 ggcagcagcagaggttttgtg 33537
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete sequence Length = 203967 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1006 ctggaatttcaagaacagctg 1026 ||||||||||||||||||||| Sbjct: 91682 ctggaatttcaagaacagctg 91702
>gb|AC104329.22| Mus musculus strain C57BL/6J clone rp23-418c12 map 3, complete sequence Length = 197096 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 190439 ccaccaccccctgttcccatc 190419
>dbj|AK149976.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530111D19 product:zinc finger protein 67, full insert sequence Length = 3598 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 356 ccaccaccccctgttcccatc 336
>dbj|AK155784.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730220J22 product:zinc finger protein 67, full insert sequence Length = 2866 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 368 ccaccaccccctgttcccatc 348
>gb|AC008737.11| Homo sapiens chromosome 19 clone CTD-2538G9, complete sequence Length = 248281 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1093 aacctcagctctgtctcatgt 1113 ||||||||||||||||||||| Sbjct: 235760 aacctcagctctgtctcatgt 235740
>dbj|AK171443.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730216A12 product:zinc finger protein 67, full insert sequence Length = 2690 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 1052 ccaccaccccctgttcccatc 1032
>dbj|AK052504.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430038O12 product:unclassifiable, full insert sequence Length = 3537 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1006 ctggaatttcaagaacagctg 1026 ||||||||||||||||||||| Sbjct: 1726 ctggaatttcaagaacagctg 1706
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 cctgcgcggcggcggccggcgcttc 262 |||||||||||||||||||| |||| Sbjct: 3033207 cctgcgcggcggcggccggcacttc 3033183
>gb|AE011888.1| Xanthomonas axonopodis pv. citri str. 306, section 266 of 469 of the complete genome Length = 10774 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 cctgcgcggcggcggccggcgcttc 262 |||||||||||||||||||| |||| Sbjct: 9311 cctgcgcggcggcggccggcacttc 9287
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 caacttcacctgaggttaaccttat 1442 |||||||||| |||||||||||||| Sbjct: 20783495 caacttcaccagaggttaaccttat 20783519
>emb|AL513202.22| Human DNA sequence from clone RP11-165H20 on chromosome 1 Contains the 3' end of a novel transcript (DKFZp313J1722), the CHI3L2 gene for chitinase 3-like 2 protein, an unprocessed pseudogene, a gene for a novel protein containing a Glycosyl hydrolases family 18 domain and the gene for eosinophil chemotactic cytokine (CHIA), complete sequence Length = 93740 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1536 ttaggacattttagtaagttg 1556 ||||||||||||||||||||| Sbjct: 48998 ttaggacattttagtaagttg 49018
>emb|AL033523.14|HS72E17 Human DNA sequence from clone RP1-72E17 on chromosome 6p24.1-25.3 Contains the 3' end of a novel gene, complete sequence Length = 90299 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1043 gctttgcttggttttcttctt 1063 ||||||||||||||||||||| Sbjct: 81145 gctttgcttggttttcttctt 81125
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctgcgcggcggcggccggcgc 259 ||||||||||||||||||||| Sbjct: 82593 ctgcgcggcggcggccggcgc 82613
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 caacttcacctgaggttaaccttat 1442 |||||||||| |||||||||||||| Sbjct: 58524 caacttcaccagaggttaaccttat 58548
>emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on chromosome 4, complete sequence Length = 159305 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 ttatcacactagttatagtgt 773 ||||||||||||||||||||| Sbjct: 156630 ttatcacactagttatagtgt 156650
>dbj|AK066107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052A02, full insert sequence Length = 1977 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 catcctgcgcggcggcggccg 255 ||||||||||||||||||||| Sbjct: 56 catcctgcgcggcggcggccg 76
>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence Length = 198777 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 ggcagcagcagaggttttgtg 383 ||||||||||||||||||||| Sbjct: 12345 ggcagcagcagaggttttgtg 12325
>gb|AC104632.10| Mus musculus strain C57BL/6J clone rp23-368d24 map 3, complete sequence Length = 210499 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 27504 ccaccaccccctgttcccatc 27484
>gb|AF056103.1|AF056103 Paranophrys carnivora translation elongation factor 1-alpha (TEF1) gene, partial cds Length = 1224 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 894 agagtggaaactggactgctc 914 ||||||||||||||||||||| Sbjct: 715 agagtggaaactggactgctc 735
>gb|BC046533.1| Mus musculus zinc finger and BTB domain containing 7B, mRNA (cDNA clone MGC:51385 IMAGE:4946243), complete cds Length = 2095 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 247 ccaccaccccctgttcccatc 227
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccaccaccccctgttcccatc 96 ||||||||||||||||||||| Sbjct: 160896 ccaccaccccctgttcccatc 160876 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 306,906,053 Number of extensions: 17718826 Number of successful extensions: 390392 Number of sequences better than 10.0: 81 Number of HSP's gapped: 390382 Number of HSP's successfully gapped: 130 Length of query: 1615 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1592 Effective length of database: 18,503,978,556 Effective search space: 29458333861152 Effective search space used: 29458333861152 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
