ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50k19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os07g0223700:Os07g0223700 384 e-107
2AK107005:Os01g0193400 31 2.0
3AK099271:Os01g0193400 31 2.0
4AK069948:Os01g0193400 31 2.0
5AK070913:Os08g0159100 30 2.6
6AK069857:Os08g0159100 30 2.6
7Os01g0148000:Os01g0148000 29 7.4
8AK101113:Os03g0689400 28 9.7 
>Os07g0223700:Os07g0223700 |
          Length = 248
 Score =  384 bits (985), Expect = e-107
 Identities = 201/245 (82%), Positives = 214/245 (87%), Gaps = 1/245 (0%)
 Frame = +1

Query: 160 CPELAGIGMHWCPGIGPRVRSFLRDYDALQSLALALIYLQIGCALIGSLAALFNGVLVIN 339
           CP  A +G+    GIGPR+RSFLRDYDALQSLALALIYLQIGCALIGSL ALFNGVLVIN
Sbjct: 8   CPCPAALGI----GIGPRLRSFLRDYDALQSLALALIYLQIGCALIGSLGALFNGVLVIN 63

Query: 340 LVIGLFAVVAIESSSQRLGRTYALLLFFAIVLDVAWFILFSHAIWNSTPDEKYGQLFVFS 519
           LVIGLFAVVAIESSSQ LGRTYA+LLFFAIVLDVAWFILFSHAIWN TP+EKYGQLFV S
Sbjct: 64  LVIGLFAVVAIESSSQTLGRTYAVLLFFAIVLDVAWFILFSHAIWNITPEEKYGQLFVLS 123

Query: 520 LRLALWMQTIGFSVRFLSSFIWIQMYRLGVSSSTPTYYEAN-DARNSFLSPRSNSVRRGS 696
           L+LALWMQ IGFS           MYRLGVSSSTPTY+E N D RNSFLSPRS+SVRR S
Sbjct: 124 LKLALWMQIIGFS-----------MYRLGVSSSTPTYHEVNYDGRNSFLSPRSSSVRRNS 172

Query: 697 VADDILGGSIYDPSYYSSLFEDVRNNACNHQGDKQSGSNDSGSTSAGQSPRLKSFGSRSF 876
           +ADDILGGSIYDP+YYSSLF DVRNN C HQGDKQSGSNDSGSTSAGQSPRLKSF SRSF
Sbjct: 173 MADDILGGSIYDPAYYSSLFADVRNNTCTHQGDKQSGSNDSGSTSAGQSPRLKSFASRSF 232

Query: 877 LSNDV 891
           ++ND+
Sbjct: 233 VANDL 237
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>AK107005:Os01g0193400 |
          Length = 373

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 297 WIACCAVQWGSCDKPCDRAICCCC 368
           W  CC    G C   C  + CCCC
Sbjct: 330 WCCCCGECCGCCWFACSWSSCCCC 353
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>AK099271:Os01g0193400 |
          Length = 373

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 297 WIACCAVQWGSCDKPCDRAICCCC 368
           W  CC    G C   C  + CCCC
Sbjct: 330 WCCCCGECCGCCWFACSWSSCCCC 353
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>AK069948:Os01g0193400 |
          Length = 373

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 297 WIACCAVQWGSCDKPCDRAICCCC 368
           W  CC    G C   C  + CCCC
Sbjct: 330 WCCCCGECCGCCWFACSWSSCCCC 353
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>AK070913:Os08g0159100 |
          Length = 278

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
 Frame = +1

Query: 316 FNGVLVINLVIGLFAVVAIESSSQRLG-RTYALLLFFAIVLDVAWFILFSHAIWNSTPDE 492
           F GV VI  +  +F           L   ++ ++LF  + L    FI F+H+  +  P +
Sbjct: 95  FIGVGVILFITSIFGCAGASRGGCCLSFYSFLIILFILVELAAGGFIFFNHSWKDVIPVD 154

Query: 493 KYGQLFVF------SLRLALWMQTIGFSVRFLSSFIWIQMYRLGVSSSTPTYYEANDARN 654
           K G   +       + R+A W+  +G +V F +    + +    V S     Y+++D   
Sbjct: 155 KTGNFDMMYSFLKENWRIAKWV-ALG-AVLFEAVLFTVALI---VQSGNQADYDSDD--- 206

Query: 655 SFLSPRSNS----VRRGSVADDILGGSIYDP 735
            +++PRS++    V +  VAD  +    Y P
Sbjct: 207 EYIAPRSSTRQPLVNKQPVADPRVPNLDYRP 237
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>AK069857:Os08g0159100 |
          Length = 278

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
 Frame = +1

Query: 316 FNGVLVINLVIGLFAVVAIESSSQRLG-RTYALLLFFAIVLDVAWFILFSHAIWNSTPDE 492
           F GV VI  +  +F           L   ++ ++LF  + L    FI F+H+  +  P +
Sbjct: 95  FIGVGVILFITSIFGCAGASRGGCCLSFYSFLIILFILVELAAGGFIFFNHSWKDVIPVD 154

Query: 493 KYGQLFVF------SLRLALWMQTIGFSVRFLSSFIWIQMYRLGVSSSTPTYYEANDARN 654
           K G   +       + R+A W+  +G +V F +    + +    V S     Y+++D   
Sbjct: 155 KTGNFDMMYSFLKENWRIAKWV-ALG-AVLFEAVLFTVALI---VQSGNQADYDSDD--- 206

Query: 655 SFLSPRSNS----VRRGSVADDILGGSIYDP 735
            +++PRS++    V +  VAD  +    Y P
Sbjct: 207 EYIAPRSSTRQPLVNKQPVADPRVPNLDYRP 237
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>Os01g0148000:Os01g0148000 |
          Length = 1980

 Score = 28.9 bits (63), Expect = 7.4
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 441  CMVYTLLTCYME*YP**EVW--STF--CLLTQTCIVDANYWVFSEVFVFIYMDPDVQVRG 608
            C+V  L+TCY E     E +  S+F  CLL   C   +   +  E FV  ++DP    + 
Sbjct: 1705 CVVQALITCYGE-----ETFDRSSFSNCLLNDVCQTMSTIDIAREYFVSKHIDPSCHPKD 1759

Query: 609  LIK 617
            +++
Sbjct: 1760 MVR 1762
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>AK101113:Os03g0689400 |
          Length = 1046

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 306 CCAVQWGSCDKPCDRAICCCCD*K**SKTWPDLRSPALLCYR 431
           C A   G    P   A CCCC        +  +R PAL C+R
Sbjct: 37  CQAAAGGEAATPVAMAGCCCC--------FRGVRVPALSCFR 70


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,663,440
Number of extensions: 543770
Number of successful extensions: 1424
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1420
Number of HSP's successfully gapped: 8
Length of query: 396
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 293
Effective length of database: 11,275,632
Effective search space: 3303760176
Effective search space used: 3303760176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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