>LOC_Os07g12220:12007.t01094:unspliced-genomic conserved hypothetical protein|
Length = 3322
Score = 147 bits (315), Expect(5) = e-117
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1 / +3
Query: 268 IYLQIGCALIGSLAALFNGVLVINLVIGLFAVVAIESSSQRLGRTYALLLFFAIVLDVAW 447
++ QIGCALIGSL ALFNGVLVINLVIGLFAVVAIESSSQ LGRTYA+LLFFAIVLDVAW
Sbjct: 1509 VFSQIGCALIGSLGALFNGVLVINLVIGLFAVVAIESSSQTLGRTYAVLLFFAIVLDVAW 1688
Query: 448 FILFSHAIW 474
FILFSHAIW
Sbjct: 1689 FILFSHAIW 1715
Score = 122 bits (261), Expect(5) = e-117
Identities = 51/65 (78%), Positives = 55/65 (84%)
Frame = +1 / +2
Query: 448 FILFSHAIWNSTPDEKYGQLFVFSLRLALWMQTIGFSVRFLSSFIWIQMYRLGVSSSTPT 627
F L + N TP+EKYGQLFV SL+LALWMQ IGFSVRFLSSFIWIQMYRLGVSSSTPT
Sbjct: 2243 FNLILYLYRNITPEEKYGQLFVLSLKLALWMQIIGFSVRFLSSFIWIQMYRLGVSSSTPT 2422
Query: 628 YYEAN 642
Y+E N
Sbjct: 2423 YHEVN 2437
Score = 103 bits (220), Expect(5) = e-117
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1 / +2
Query: 643 DARNSFLSPRSNSVRRGSVADDILGGSIYDPSYYSSLFEDVRNNACNHQ 789
D RNSFLSPRS+SVRR S+ADDILGGSIYDP+YYSSLF DVRNN C HQ
Sbjct: 2441 DGRNSFLSPRSSSVRRNSMADDILGGSIYDPAYYSSLFADVRNNTCTHQ 2587
Score = 80.3 bits (169), Expect(5) = e-117
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1 / +3
Query: 787 QGDKQSGSNDSGSTSAGQSPRLKSFGSRSFLSNDVSHVQLF 909
QGDKQSGSNDSGSTSAGQSPRLKSF SRSF++NDVS +F
Sbjct: 2889 QGDKQSGSNDSGSTSAGQSPRLKSFASRSFVANDVSLCLIF 3011
Score = 63.4 bits (132), Expect(5) = e-117
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +1 / +1
Query: 199 GIGPRVRSFLRDYDALQSLALALIYLQI 282
GIGPR+RSFLRDYDALQSLALALIYLQ+
Sbjct: 49 GIGPRLRSFLRDYDALQSLALALIYLQV 132
Score = 124 bits (266), Expect(6) = 6e-90
Identities = 49/56 (87%), Positives = 54/56 (96%)
Frame = -3 / -2
Query: 641 FAS*YVGVLDETPNLYIWIHINEDKNLTENPIVCIHNASLSEKTKS*PYFSSGVLF 474
F S*YVGVLDETP+LYIWIH+ EDKNLTENPI+CIHNASLS+KTKS*PYFSSGV+F
Sbjct: 2436 FTS*YVGVLDETPSLYIWIHMKEDKNLTENPIICIHNASLSDKTKS*PYFSSGVIF 2269
Score = 106 bits (227), Expect(6) = 6e-90
Identities = 49/66 (74%), Positives = 51/66 (77%)
Frame = -3 / -1
Query: 476 FHIACEKSINHATSRTIAKKSRRA*VRPXXXXXXSIATTANSPITRFITRTPLNSAASDP 297
+HIACEK IN ATSRTIAK R A VRP SIATTA SPITR ITRTPLN+A SDP
Sbjct: 1717 YHIACEKRINQATSRTIAKNRRTAYVRPSVWLLLSIATTAKSPITRLITRTPLNNAPSDP 1538
Query: 296 ISAQPI 279
ISAQPI
Sbjct: 1537 ISAQPI 1520
Score = 90.4 bits (191), Expect(6) = 6e-90
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -1 / -3
Query: 790 PDDCMHYFEHLQREKSSKKDHK*NHPIYHQPLNPV*LN*IWGSRNYFLHHLL 635
PD+CM F H ++EK+S++DHK*NHPIYHQP N V*LN I GSRNYF HH L
Sbjct: 2588 PDECMCCFGHPRKEKNSRQDHK*NHPIYHQPWNFV*LNLILGSRNYFFHHSL 2433
Score = 71.2 bits (149), Expect(6) = 6e-90
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1 / -2
Query: 895 DLHH*KEKIYYQKI*AVEIVLQMLTRYHYYHFVYHPDD 782
DLHH +KIY+QKI* VEI QML YHYYHFVYHP D
Sbjct: 2997 DLHHWPQKIYWQKI*VVEIDPQMLIHYHYYHFVYHPAD 2884
Score = 26.7 bits (52), Expect(6) = 6e-90
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 1031 LHAFIDQNPT*MRQ 990
LH F + NPT*MRQ
Sbjct: 3147 LHQFAESNPT*MRQ 3106
Score = 23.5 bits (45), Expect(6) = 6e-90
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / -3
Query: 224 KERTRGPIP 198
KER+RGPIP
Sbjct: 74 KERSRGPIP 48
Score = 110 bits (234), Expect(4) = 1e-65
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3 / +2
Query: 279 DWLCADWIACCAVQWGSCDKPCDRAICCCCD*K**SKTWPDLRSPALLCYRP*CCMVYTL 458
DWLCADW+ VQW SCD+P + A+CCCC+*+* TW D+ SP++L Y *CC+VY+L
Sbjct: 1520 DWLCADWVTWSIVQWRSCDQPGNWALCCCCN*E*QPDTWSDICSPSVLRYCS*CCLVYSL 1699
Query: 459 LTCYM 473
LTCYM
Sbjct: 1700 LTCYM 1714
Score = 92.3 bits (195), Expect(4) = 1e-65
Identities = 41/60 (68%), Positives = 43/60 (71%)
Frame = +2 / +3
Query: 473 GIVPLMRSMVNFLSSHSDLHCGCKLLGFQ*GFCLHLYGSRCTG*GSHQARQRIMKQMMQE 652
GI+ L RSMVNF HS+ CGCKLLGFQ*GFCL YGSRC G G HQA Q IMK M E
Sbjct: 2268 GILLLKRSMVNFSFYHSN*RCGCKLLGFQ*GFCLPSYGSRCIGWGFHQAPQHIMK*TMME 2447
Score = 70.3 bits (147), Expect(4) = 1e-65
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +2 / +3
Query: 641 MMQEIVS*APDLIQLDGVQWLMIYWVVLFMIXXXXXXXXKMFEIMHAIIR 790
MM+EIVS*A D +QLD + WLMIYWVVLFMI +M E HA+IR
Sbjct: 2439 MMEEIVS*AQDQVQLDEIPWLMIYWVVLFMILPTILLFSRMSETTHALIR 2588
Score = 48.3 bits (99), Expect(4) = 1e-65
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +3 / +2
Query: 783 SSG**TKW****RVNICRTISTA*IFW**IFSF**CKSRS 902
S+G**TKW**** +NIC +IST *IF *IF *CKS S
Sbjct: 2885 SAG**TKW****WINICGSISTT*IFCQ*IFCGQ*CKSMS 3004
Score = 93.6 bits (198), Expect(4) = 3e-62
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = -2 / -3
Query: 477 IPYSM*EEYKPCNIKDDSKEEQESVSPAKSLTTTFNRNNSK*PYHKVYHKNPIEQRSKRS 298
IPYSM*EE KP NIK++S+E+++ + P K L T N NNSK P ++V HKN IEQ SK
Sbjct: 1718 IPYSM*EENKPSNIKNNSEEQKDCICPTKCLAATLNCNNSKEPNYQVDHKNAIEQCSK*P 1539
Query: 297 NQRTTNL 277
NQRTTNL
Sbjct: 1538 NQRTTNL 1518
Score = 85.4 bits (180), Expect(4) = 3e-62
Identities = 40/46 (86%), Positives = 41/46 (89%)
Frame = -3 / -2
Query: 779 HALFRTSSKREE**EGS*IEPPNISSATEPRLTELDLGLKKLFLAS 642
H LFRTS+KREE** GS*IEPPNISSA E RLTELDLGLKKLFL S
Sbjct: 2577 HVLFRTSAKREE**AGS*IEPPNISSAMEFRLTELDLGLKKLFLPS 2440
Score = 85.4 bits (180), Expect(4) = 3e-62
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = -1 / -3
Query: 655 YFLHHLLHNTLACLMRPLTCTSGSI*MKTKTSLKTQ*FASTMQV*VRRQKVDHTSHQGYY 476
+F H LLH+ L CLM+P TSGSI* KTKT LKTQ*FAST V*V ++KVDHTS Q Y
Sbjct: 2450 FFHHSLLHDMLGCLMKPPAYTSGSI*RKTKTLLKTQ*FASTTLV*VIKRKVDHTSLQE*Y 2271
Query: 475 S 473
S
Sbjct: 2270 S 2268
Score = 45.1 bits (92), Expect(4) = 3e-62
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 893 LTSLERKDLLPKDLSRGDCPADVD 822
LTSL KDLL KDLSRGD PADVD
Sbjct: 2995 LTSLATKDLLAKDLSRGD*PADVD 2924
Score = 91.3 bits (193), Expect(4) = 5e-31
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3 / +1
Query: 474 E*YP**EVWSTFCLLTQTCIVDANYWVFSEVFVFIYMDPDVQVRGLIKHANVL*SK 641
E Y * EVWSTF +TQT +VDANYWVFS+VFVF++MDPDV G IKH N+ *SK
Sbjct: 2269 EYYS*REVWSTFRFITQTSVVDANYWVFSKVFVFLHMDPDV*AGGFIKHPNIS*SK 2436
Score = 49.6 bits (102), Expect(4) = 5e-31
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3 / +1
Query: 648 KK*FLEPQI*FS*TGFSG**YIGWFY 725
KK*FLEP+I FS*T F G**YIGWFY
Sbjct: 2446 KK*FLEPKIKFS*TKFHG**YIGWFY 2523
Score = 39.6 bits (80), Expect(4) = 5e-31
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 779 AIIRVINKVVVMIAGQHLQDNLH 847
++ RVINKVVVMI QHL+ NLH
Sbjct: 2881 SVCRVINKVVVMIVDQHLRVNLH 2949
Score = 22.6 bits (43), Expect(4) = 5e-31
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1 / +2
Query: 394 GRTYALLLFFAIVLDVAWFILFSHAI 471
G T+ F + D AW +L HA+
Sbjct: 2042 GSTFV**NLFGFMCDGAWLLLVFHAL 2119
Score = 84.9 bits (179), Expect(4) = 7e-29
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = -2 / -1
Query: 651 SCIICFIIRWRA**DP*PVHLDPYK*RQKPH*KPNSLHPQCKSE*EDKKLTILLIRGTIP 472
S I+ F+I W A**+P P+HLDPY+ RQKP+*KPN+LHPQ E* ++KLTILL R IP
Sbjct: 2446 SIIVYFMICWGA**NPQPIHLDPYEGRQKPY*KPNNLHPQR*FE**NEKLTILLFRSNIP 2267
Score = 42.8 bits (87), Expect(4) = 7e-29
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 894 TYIIRKKRSTTKRFKPWRLSCRC* 823
TYII KRST KRFK WRL+ RC*
Sbjct: 2996 TYIIGHKRSTGKRFKSWRLTRRC* 2925
Score = 42.3 bits (86), Expect(4) = 7e-29
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -2 / -1
Query: 780 ACIISNIFKEXXXXXXXXXXXTQYIISH*TPSN*IRSGAQETISCIICFII 628
AC++S+I ++ TQYIISH SN* S AQETIS II + +
Sbjct: 2578 ACVVSDIREKRRIVGRIINRTTQYIISHGISSN*T*SWAQETISSIIVYFM 2426
Score = 25.8 bits (50), Expect(4) = 7e-29
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 328 EPH*TAQQAIQSAHNQ 281
E H*T Q QSAHNQ
Sbjct: 1569 ERH*TMLQVTQSAHNQ 1522
Score = 36.3 bits (73), Expect = 0.42
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -1 / -2
Query: 520 VRRQKVDHTSHQGYYSI*HVRRV*TMQHQGR*QRRAGERKSGQVFDYY 377
V K+ H ++I*HVRR *T QHQ +*+R G S QV Y
Sbjct: 1761 VMNYKI*WLIHCRRHTI*HVRRE*TKQHQEQ*RRTEGLHMSDQVSGCY 1618
>LOC_Os12g13890:12012.t01256:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,|
expressed
Length = 1067
Score = 27.2 bits (53), Expect(3) = 0.065
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2 / -1
Query: 1116 VHKLHSWSHHITKMNSHTTIMNR 1048
VH LH HH + +HT I N+
Sbjct: 590 VHSLHQKLHHPDHIQNHTRIHNQ 522
Score = 26.3 bits (51), Expect(3) = 0.065
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1 / -1
Query: 709 YHQPLNPV*LN*IWGSRNYFLHHLLHNTL 623
+H L+P+ L+ ++ S LHHL HN +
Sbjct: 395 HHPVLHPLRLHHLFHSLLQMLHHLGHNQI 309
Score = 24.9 bits (48), Expect(3) = 0.065
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -1 / -1
Query: 778 MHYFEHLQREKSSKKDHK*NHPIYHQPLNP 689
+H+ H +K DH NH + H + P
Sbjct: 485 LHHLVHNLHQKLPYLDHSLNHTLIHSLILP 396
>LOC_Os07g31560:12007.t02844:unspliced-genomic hypothetical protein|
Length = 1025
Score = 31.8 bits (63), Expect = 10.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2 / -2
Query: 480 TIPYSM*EEYKPCNIKDDSKEEQESVSPAKSLTTT 376
T P S+ EEY P ++ DD+ SP+ S +++
Sbjct: 835 TTPSSLREEYSPSSLVDDASPSSSRASPSSSSSSS 731
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 401,425,849
Number of extensions: 5760305
Number of successful extensions: 21666
Number of sequences better than 10.0: 23
Length of query: 396
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 346
Effective length of database: 52,799,986
Effective search space: 18268795156
Effective search space used: 18268795156
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)