ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os07g12220:12007.t01094:unspliced-genomic conserved hypo... 147 e-117
2LOC_Os12g13890:12012.t01256:unspliced-genomic glycine-rich c... 27 0.065
3LOC_Os03g52570:12003.t04581:unspliced-genomic glycerol-3-pho... 27 1.6
4LOC_Os09g13610:12009.t01150:unspliced-genomic PFT1, putative... 34 2.0
5LOC_Os01g09730:12001.t00850:unspliced-genomic expressed protein 34 2.0
6LOC_Os12g06270:12012.t00513:unspliced-genomic retrotransposo... 34 2.0
7LOC_Os08g40880:12008.t03818:unspliced-genomic mRNA 3-UTR bin... 34 2.8
8LOC_Os02g37430:12002.t03381:unspliced-genomic small nuclear ... 34 2.8
9LOC_Os12g13860:12012.t01253:unspliced-genomic retrotransposo... 34 2.8
10LOC_Os05g27660:12005.t02417:unspliced-genomic expressed protein 34 2.8
11LOC_Os03g56970:12003.t04965:unspliced-genomic ATARP7, putati... 34 2.8
12LOC_Os12g08150:12012.t00697:unspliced-genomic conserved hypo... 30 3.8
13LOC_Os04g32250:12004.t02904:unspliced-genomic conserved hypo... 33 3.8
14LOC_Os05g41050:12005.t03644:unspliced-genomic GRF zinc finge... 33 3.9
15LOC_Os04g53998:12004.t05441:unspliced-genomic receptor-like ... 33 3.9
16LOC_Os02g20140:12002.t01806:unspliced-genomic protein kinase... 30 4.5
17LOC_Os04g32160:12004.t02895:unspliced-genomic conserved hypo... 33 5.3
18LOC_Os12g38160:12012.t03497:unspliced-genomic conserved hypo... 33 5.3
19LOC_Os11g10070:12011.t00899:unspliced-genomic transcriptiona... 32 7.3
20LOC_Os04g37520:12004.t03322:unspliced-genomic expressed protein 27 7.7
21LOC_Os04g57620:12004.t05228:unspliced-genomic hypothetical p... 32 10.0
22LOC_Os07g31590:12007.t02846:unspliced-genomic retrotransposo... 32 10.0
23LOC_Os07g31560:12007.t02844:unspliced-genomic hypothetical p... 32 10.0

>LOC_Os07g12220:12007.t01094:unspliced-genomic conserved hypothetical protein|
          Length = 3322
 Score =  147 bits (315), Expect(5) = e-117
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +1 / +3

                                                                        
Query: 268  IYLQIGCALIGSLAALFNGVLVINLVIGLFAVVAIESSSQRLGRTYALLLFFAIVLDVAW 447
            ++ QIGCALIGSL ALFNGVLVINLVIGLFAVVAIESSSQ LGRTYA+LLFFAIVLDVAW
Sbjct: 1509 VFSQIGCALIGSLGALFNGVLVINLVIGLFAVVAIESSSQTLGRTYAVLLFFAIVLDVAW 1688

                     
Query: 448  FILFSHAIW 474
            FILFSHAIW
Sbjct: 1689 FILFSHAIW 1715



 Score =  122 bits (261), Expect(5) = e-117
 Identities = 51/65 (78%), Positives = 55/65 (84%)
 Frame = +1 / +2

                                                                        
Query: 448  FILFSHAIWNSTPDEKYGQLFVFSLRLALWMQTIGFSVRFLSSFIWIQMYRLGVSSSTPT 627
            F L  +   N TP+EKYGQLFV SL+LALWMQ IGFSVRFLSSFIWIQMYRLGVSSSTPT
Sbjct: 2243 FNLILYLYRNITPEEKYGQLFVLSLKLALWMQIIGFSVRFLSSFIWIQMYRLGVSSSTPT 2422

                 
Query: 628  YYEAN 642
            Y+E N
Sbjct: 2423 YHEVN 2437



 Score =  103 bits (220), Expect(5) = e-117
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = +1 / +2

                                                             
Query: 643  DARNSFLSPRSNSVRRGSVADDILGGSIYDPSYYSSLFEDVRNNACNHQ 789
            D RNSFLSPRS+SVRR S+ADDILGGSIYDP+YYSSLF DVRNN C HQ
Sbjct: 2441 DGRNSFLSPRSSSVRRNSMADDILGGSIYDPAYYSSLFADVRNNTCTHQ 2587



 Score = 80.3 bits (169), Expect(5) = e-117
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1 / +3

                                                     
Query: 787  QGDKQSGSNDSGSTSAGQSPRLKSFGSRSFLSNDVSHVQLF 909
            QGDKQSGSNDSGSTSAGQSPRLKSF SRSF++NDVS   +F
Sbjct: 2889 QGDKQSGSNDSGSTSAGQSPRLKSFASRSFVANDVSLCLIF 3011



 Score = 63.4 bits (132), Expect(5) = e-117
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +1 / +1

                                       
Query: 199 GIGPRVRSFLRDYDALQSLALALIYLQI 282
           GIGPR+RSFLRDYDALQSLALALIYLQ+
Sbjct: 49  GIGPRLRSFLRDYDALQSLALALIYLQV 132



 Score =  124 bits (266), Expect(6) = 6e-90
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -3 / -2

                                                                    
Query: 641  FAS*YVGVLDETPNLYIWIHINEDKNLTENPIVCIHNASLSEKTKS*PYFSSGVLF 474
            F S*YVGVLDETP+LYIWIH+ EDKNLTENPI+CIHNASLS+KTKS*PYFSSGV+F
Sbjct: 2436 FTS*YVGVLDETPSLYIWIHMKEDKNLTENPIICIHNASLSDKTKS*PYFSSGVIF 2269



 Score =  106 bits (227), Expect(6) = 6e-90
 Identities = 49/66 (74%), Positives = 51/66 (77%)
 Frame = -3 / -1

                                                                        
Query: 476  FHIACEKSINHATSRTIAKKSRRA*VRPXXXXXXSIATTANSPITRFITRTPLNSAASDP 297
            +HIACEK IN ATSRTIAK  R A VRP      SIATTA SPITR ITRTPLN+A SDP
Sbjct: 1717 YHIACEKRINQATSRTIAKNRRTAYVRPSVWLLLSIATTAKSPITRLITRTPLNNAPSDP 1538

                  
Query: 296  ISAQPI 279
            ISAQPI
Sbjct: 1537 ISAQPI 1520



 Score = 90.4 bits (191), Expect(6) = 6e-90
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -1 / -3

                                                                
Query: 790  PDDCMHYFEHLQREKSSKKDHK*NHPIYHQPLNPV*LN*IWGSRNYFLHHLL 635
            PD+CM  F H ++EK+S++DHK*NHPIYHQP N V*LN I GSRNYF HH L
Sbjct: 2588 PDECMCCFGHPRKEKNSRQDHK*NHPIYHQPWNFV*LNLILGSRNYFFHHSL 2433



 Score = 71.2 bits (149), Expect(6) = 6e-90
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = -1 / -2

                                                  
Query: 895  DLHH*KEKIYYQKI*AVEIVLQMLTRYHYYHFVYHPDD 782
            DLHH  +KIY+QKI* VEI  QML  YHYYHFVYHP D
Sbjct: 2997 DLHHWPQKIYWQKI*VVEIDPQMLIHYHYYHFVYHPAD 2884



 Score = 26.7 bits (52), Expect(6) = 6e-90
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3 / -2

                          
Query: 1031 LHAFIDQNPT*MRQ 990
            LH F + NPT*MRQ
Sbjct: 3147 LHQFAESNPT*MRQ 3106



 Score = 23.5 bits (45), Expect(6) = 6e-90
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3 / -3

                    
Query: 224 KERTRGPIP 198
           KER+RGPIP
Sbjct: 74  KERSRGPIP 48



 Score =  110 bits (234), Expect(4) = 1e-65
 Identities = 39/65 (60%), Positives = 50/65 (76%)
 Frame = +3 / +2

                                                                        
Query: 279  DWLCADWIACCAVQWGSCDKPCDRAICCCCD*K**SKTWPDLRSPALLCYRP*CCMVYTL 458
            DWLCADW+    VQW SCD+P + A+CCCC+*+*   TW D+ SP++L Y  *CC+VY+L
Sbjct: 1520 DWLCADWVTWSIVQWRSCDQPGNWALCCCCN*E*QPDTWSDICSPSVLRYCS*CCLVYSL 1699

                 
Query: 459  LTCYM 473
            LTCYM
Sbjct: 1700 LTCYM 1714



 Score = 92.3 bits (195), Expect(4) = 1e-65
 Identities = 41/60 (68%), Positives = 43/60 (71%)
 Frame = +2 / +3

                                                                        
Query: 473  GIVPLMRSMVNFLSSHSDLHCGCKLLGFQ*GFCLHLYGSRCTG*GSHQARQRIMKQMMQE 652
            GI+ L RSMVNF   HS+  CGCKLLGFQ*GFCL  YGSRC G G HQA Q IMK  M E
Sbjct: 2268 GILLLKRSMVNFSFYHSN*RCGCKLLGFQ*GFCLPSYGSRCIGWGFHQAPQHIMK*TMME 2447



 Score = 70.3 bits (147), Expect(4) = 1e-65
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2 / +3

                                                              
Query: 641  MMQEIVS*APDLIQLDGVQWLMIYWVVLFMIXXXXXXXXKMFEIMHAIIR 790
            MM+EIVS*A D +QLD + WLMIYWVVLFMI        +M E  HA+IR
Sbjct: 2439 MMEEIVS*AQDQVQLDEIPWLMIYWVVLFMILPTILLFSRMSETTHALIR 2588



 Score = 48.3 bits (99), Expect(4) = 1e-65
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +3 / +2

                                                    
Query: 783  SSG**TKW****RVNICRTISTA*IFW**IFSF**CKSRS 902
            S+G**TKW**** +NIC +IST *IF  *IF   *CKS S
Sbjct: 2885 SAG**TKW****WINICGSISTT*IFCQ*IFCGQ*CKSMS 3004



 Score = 93.6 bits (198), Expect(4) = 3e-62
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = -2 / -3

                                                                        
Query: 477  IPYSM*EEYKPCNIKDDSKEEQESVSPAKSLTTTFNRNNSK*PYHKVYHKNPIEQRSKRS 298
            IPYSM*EE KP NIK++S+E+++ + P K L  T N NNSK P ++V HKN IEQ SK  
Sbjct: 1718 IPYSM*EENKPSNIKNNSEEQKDCICPTKCLAATLNCNNSKEPNYQVDHKNAIEQCSK*P 1539

                   
Query: 297  NQRTTNL 277
            NQRTTNL
Sbjct: 1538 NQRTTNL 1518



 Score = 85.4 bits (180), Expect(4) = 3e-62
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -3 / -2

                                                          
Query: 779  HALFRTSSKREE**EGS*IEPPNISSATEPRLTELDLGLKKLFLAS 642
            H LFRTS+KREE** GS*IEPPNISSA E RLTELDLGLKKLFL S
Sbjct: 2577 HVLFRTSAKREE**AGS*IEPPNISSAMEFRLTELDLGLKKLFLPS 2440



 Score = 85.4 bits (180), Expect(4) = 3e-62
 Identities = 41/61 (67%), Positives = 46/61 (75%)
 Frame = -1 / -3

                                                                        
Query: 655  YFLHHLLHNTLACLMRPLTCTSGSI*MKTKTSLKTQ*FASTMQV*VRRQKVDHTSHQGYY 476
            +F H LLH+ L CLM+P   TSGSI* KTKT LKTQ*FAST  V*V ++KVDHTS Q  Y
Sbjct: 2450 FFHHSLLHDMLGCLMKPPAYTSGSI*RKTKTLLKTQ*FASTTLV*VIKRKVDHTSLQE*Y 2271

             
Query: 475  S 473
            S
Sbjct: 2270 S 2268



 Score = 45.1 bits (92), Expect(4) = 3e-62
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -3 / -1

                                    
Query: 893  LTSLERKDLLPKDLSRGDCPADVD 822
            LTSL  KDLL KDLSRGD PADVD
Sbjct: 2995 LTSLATKDLLAKDLSRGD*PADVD 2924



 Score = 91.3 bits (193), Expect(4) = 5e-31
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = +3 / +1

                                                                    
Query: 474  E*YP**EVWSTFCLLTQTCIVDANYWVFSEVFVFIYMDPDVQVRGLIKHANVL*SK 641
            E Y * EVWSTF  +TQT +VDANYWVFS+VFVF++MDPDV   G IKH N+ *SK
Sbjct: 2269 EYYS*REVWSTFRFITQTSVVDANYWVFSKVFVFLHMDPDV*AGGFIKHPNIS*SK 2436



 Score = 49.6 bits (102), Expect(4) = 5e-31
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +3 / +1

                                      
Query: 648  KK*FLEPQI*FS*TGFSG**YIGWFY 725
            KK*FLEP+I FS*T F G**YIGWFY
Sbjct: 2446 KK*FLEPKIKFS*TKFHG**YIGWFY 2523



 Score = 39.6 bits (80), Expect(4) = 5e-31
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2 / +1

                                   
Query: 779  AIIRVINKVVVMIAGQHLQDNLH 847
            ++ RVINKVVVMI  QHL+ NLH
Sbjct: 2881 SVCRVINKVVVMIVDQHLRVNLH 2949



 Score = 22.6 bits (43), Expect(4) = 5e-31
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1 / +2

                                      
Query: 394  GRTYALLLFFAIVLDVAWFILFSHAI 471
            G T+     F  + D AW +L  HA+
Sbjct: 2042 GSTFV**NLFGFMCDGAWLLLVFHAL 2119



 Score = 84.9 bits (179), Expect(4) = 7e-29
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -2 / -1

                                                                        
Query: 651  SCIICFIIRWRA**DP*PVHLDPYK*RQKPH*KPNSLHPQCKSE*EDKKLTILLIRGTIP 472
            S I+ F+I W A**+P P+HLDPY+ RQKP+*KPN+LHPQ   E* ++KLTILL R  IP
Sbjct: 2446 SIIVYFMICWGA**NPQPIHLDPYEGRQKPY*KPNNLHPQR*FE**NEKLTILLFRSNIP 2267



 Score = 42.8 bits (87), Expect(4) = 7e-29
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = -2 / -3

                                    
Query: 894  TYIIRKKRSTTKRFKPWRLSCRC* 823
            TYII  KRST KRFK WRL+ RC*
Sbjct: 2996 TYIIGHKRSTGKRFKSWRLTRRC* 2925



 Score = 42.3 bits (86), Expect(4) = 7e-29
 Identities = 23/51 (45%), Positives = 30/51 (58%)
 Frame = -2 / -1

                                                               
Query: 780  ACIISNIFKEXXXXXXXXXXXTQYIISH*TPSN*IRSGAQETISCIICFII 628
            AC++S+I ++           TQYIISH   SN*  S AQETIS II + +
Sbjct: 2578 ACVVSDIREKRRIVGRIINRTTQYIISHGISSN*T*SWAQETISSIIVYFM 2426



 Score = 25.8 bits (50), Expect(4) = 7e-29
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -1 / -2

                            
Query: 328  EPH*TAQQAIQSAHNQ 281
            E H*T  Q  QSAHNQ
Sbjct: 1569 ERH*TMLQVTQSAHNQ 1522



 Score = 36.3 bits (73), Expect = 0.42
 Identities = 21/48 (43%), Positives = 26/48 (54%)
 Frame = -1 / -2

                                                            
Query: 520  VRRQKVDHTSHQGYYSI*HVRRV*TMQHQGR*QRRAGERKSGQVFDYY 377
            V   K+    H   ++I*HVRR *T QHQ +*+R  G   S QV   Y
Sbjct: 1761 VMNYKI*WLIHCRRHTI*HVRRE*TKQHQEQ*RRTEGLHMSDQVSGCY 1618



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>LOC_Os12g13890:12012.t01256:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,|
            expressed
          Length = 1067

 Score = 27.2 bits (53), Expect(3) = 0.065
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2 / -1

                                   
Query: 1116 VHKLHSWSHHITKMNSHTTIMNR 1048
            VH LH   HH   + +HT I N+
Sbjct: 590  VHSLHQKLHHPDHIQNHTRIHNQ 522



 Score = 26.3 bits (51), Expect(3) = 0.065
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1 / -1

                                        
Query: 709 YHQPLNPV*LN*IWGSRNYFLHHLLHNTL 623
           +H  L+P+ L+ ++ S    LHHL HN +
Sbjct: 395 HHPVLHPLRLHHLFHSLLQMLHHLGHNQI 309



 Score = 24.9 bits (48), Expect(3) = 0.065
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1 / -1

                                         
Query: 778 MHYFEHLQREKSSKKDHK*NHPIYHQPLNP 689
           +H+  H   +K    DH  NH + H  + P
Sbjct: 485 LHHLVHNLHQKLPYLDHSLNHTLIHSLILP 396



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>LOC_Os03g52570:12003.t04581:unspliced-genomic glycerol-3-phosphate acyltransferase 8, putative|
          Length = 1817

 Score = 27.2 bits (53), Expect(2) = 1.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3 / +1

                                                
Query: 492 EVWSTFCLLTQTCIVDANYWVFSEVFVFIYMDPDVQV 602
           E W  F    + C++ AN  +  E F+  Y+  D+ V
Sbjct: 205 ESWRVFSACGRRCVLTANPRMMVEAFLKEYLGADIVV 315



 Score = 24.4 bits (47), Expect(2) = 1.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3 / +2

                               
Query: 384 SKTWPDLRSPALLCYRP*CC 443
           S+ WP   SP L  +R  CC
Sbjct: 116 SRPWPARGSPTLRRWRAPCC 175



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>LOC_Os09g13610:12009.t01150:unspliced-genomic PFT1, putative, expressed|
          Length = 11323

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3 / -2

                                  
Query: 306   CCAVQWGSCDKPCDRAICCCC 368
             CC   WG C   C   ICCCC
Sbjct: 10704 CC*SCWGCCCCCCICCICCCC 10642



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>LOC_Os01g09730:12001.t00850:unspliced-genomic expressed protein|
          Length = 2373

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3 / +1

                                    
Query: 297  WIACCAVQWGSCDKPCDRAICCCC 368
            W  CC    G C   C  + CCCC
Sbjct: 1228 WCCCCGECCGCCWFACSWSSCCCC 1299



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>LOC_Os12g06270:12012.t00513:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 10426

 Score = 34.1 bits (68), Expect = 2.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -2 / -2

                                        
Query: 912  FK*LNVTYIIRKKRSTTKRFKPWRLSCR 829
            FK* ++TY++++ + +  R   W+LSCR
Sbjct: 6333 FK*FSITYLMKENKVSCCRISCWKLSCR 6250



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>LOC_Os08g40880:12008.t03818:unspliced-genomic mRNA 3-UTR binding protein, putative, expressed|
          Length = 5862

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3 / -1

                                         
Query: 279 DWLCADWIACCAVQWGSCDKPCDRAICCCC 368
           DW C    + C ++   C   C    CCCC
Sbjct: 384 DWYCCCCCSACCIRRACCCCCCLSRCCCCC 295



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>LOC_Os02g37430:12002.t03381:unspliced-genomic small nuclear ribonucleoprotein Sm D1, putative, expressed|
          Length = 3432

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3 / +2

                                         
Query: 279 DWLCADWIACCAVQWGSCDKPCDRAICCCC 368
           D L   +  CC   W    + C+R +CC C
Sbjct: 323 DVLATFFFCCCCSFWRRVTRVCERRLCCLC 412



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>LOC_Os12g13860:12012.t01253:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1500

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -1 / -3

                                                      
Query: 817  YHYYHFVYHPDDCMHYFEHLQREKSSKKDHK*NHPIYHQPLN 692
            +  +H V H     H+  H  R K  + DH  NH   H P++
Sbjct: 1384 HELHHLVLHRHHHHHHLAHSFRRKLHRPDHIQNHTRIHNPIH 1259



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>LOC_Os05g27660:12005.t02417:unspliced-genomic expressed protein|
          Length = 4433

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1 / +2

                                          
Query: 508  FVFSLRLALWMQTIGFSVRFLSSFIWIQMY 597
            F + L   LW++T G ++ FLSS  W+ +Y
Sbjct: 1313 FGWYLECILWLETEGATLFFLSSICWLHLY 1402



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>LOC_Os03g56970:12003.t04965:unspliced-genomic ATARP7, putative, expressed|
          Length = 5377

 Score = 33.6 bits (67), Expect = 2.8
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1 / +2

                                                             
Query: 202 IGPRVRSFLRDYDALQSLALALIYLQIGCALIGSLAALFNGVLVINLVIG 351
           + P VR F++D+DA++ L   ++Y  IG  +      LF   L    VIG
Sbjct: 482 VQPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKVIG 631



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>LOC_Os12g08150:12012.t00697:unspliced-genomic conserved hypothetical protein|
          Length = 579

 Score = 29.9 bits (59), Expect(2) = 3.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3 / +1

                                         
Query: 279 DWLCADWIACCAVQWGSCDKPCDRAICCCC 368
           +WL    ++  A+ W      C   +CCCC
Sbjct: 154 EWLPVAGLSLVALPWAFWIATCAYRLCCCC 243



 Score = 23.1 bits (44), Expect(2) = 3.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1 / +1

                       
Query: 1054 HYGGMRVHFGD 1086
            H G  RVHFGD
Sbjct: 394  HSGTRRVHFGD 426



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>LOC_Os04g32250:12004.t02904:unspliced-genomic conserved hypothetical protein|
          Length = 3671

 Score = 33.1 bits (66), Expect = 3.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3 / -1

                                
Query: 306 CCAVQWGSCDKPCDRAICCCC 368
           CC V  G C K  D  I CCC
Sbjct: 71  CCCVGGGGCPKILDCGISCCC 9



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>LOC_Os05g41050:12005.t03644:unspliced-genomic GRF zinc finger family protein, expressed|
          Length = 831

 Score = 33.1 bits (66), Expect = 3.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1 / -3

                                           
Query: 832 QMLTRYHYYHFVYHPDDCMHYFEHLQREKSSK 737
           Q    +H+ H V HP + +H  EH Q+   S+
Sbjct: 625 QQFALHHFQHMVVHPVEPLHLSEHAQQNMDSE 530



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>LOC_Os04g53998:12004.t05441:unspliced-genomic receptor-like kinase, putative, expressed|
          Length = 4114

 Score = 33.1 bits (66), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1 / -3

                                     
Query: 670  WGSRNYFLHHLLHNTLACLMRPLTC 596
            +G++NYF+  LLH  L  L +P  C
Sbjct: 2234 FGNQNYFISELLHTLLRTLTKPFDC 2160



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>LOC_Os02g20140:12002.t01806:unspliced-genomic protein kinase domain containing protein|
          Length = 7228

 Score = 29.9 bits (59), Expect(2) = 4.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3 / +1

                                
Query: 18   HARTHPLDARTHARTHSTHA 77
            H R  P + RTHARTH+  A
Sbjct: 3541 HRRPGPAEQRTHARTHAAAA 3600



 Score = 26.3 bits (51), Expect(2) = 4.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3 / +3

                                   
Query: 297  WIACCAVQWGSCDKPCDRAICCC 365
            WI C   +     + C  +ICCC
Sbjct: 5220 WIMCRLCELMEMRRNCSGSICCC 5288



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>LOC_Os04g32160:12004.t02895:unspliced-genomic conserved hypothetical protein|
          Length = 2957

 Score = 32.7 bits (65), Expect = 5.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +3 / -2

                                          
Query: 288  CADWIACCAVQWGSCDKPCDRAICCCCD*K 377
            C+  I CC     S    C  A CCCC  K
Sbjct: 2761 CSAAIICCCCCCSSMSCCCSAACCCCCSRK 2672



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>LOC_Os12g38160:12012.t03497:unspliced-genomic conserved hypothetical protein|
          Length = 1252

 Score = 32.7 bits (65), Expect = 5.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1 / +3

                                  
Query: 481 TPDEKYGQLFVFSLRLALWMQTI 549
           T  EK G L  F+L+L LW+QTI
Sbjct: 801 TSKEKTGSLLKFALQLMLWLQTI 869



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>LOC_Os11g10070:12011.t00899:unspliced-genomic transcriptional corepressor SEUSS, putative, expressed|
          Length = 8441

 Score = 32.2 bits (64), Expect = 7.3
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +3 / -2

                                       
Query: 288  CADWIACCAVQWGSCDKPCDRAICCCC 368
            C     CC   W  C     R  CCCC
Sbjct: 1870 CCCCCCCCCCNWFLCKGRFFRICCCCC 1790



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>LOC_Os04g37520:12004.t03322:unspliced-genomic expressed protein|
          Length = 2416

 Score = 27.2 bits (53), Expect(2) = 7.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3 / +3

                          
Query: 288 CADWIACCAVQWGSC 332
           C+ W ACC+  + SC
Sbjct: 597 CSSWRACCSGSYASC 641



 Score = 26.7 bits (52), Expect(2) = 7.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1 / +2

                                           
Query: 724  IYDPSYYSSLFEDVRNNACNHQGDKQSGSND 816
            I+D S YS  F ++    C H+    + SND
Sbjct: 1649 IFDHSSYSKKFYEICKTICVHENIFNNKSND 1741



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>LOC_Os04g57620:12004.t05228:unspliced-genomic hypothetical protein|
          Length = 3652

 Score = 31.8 bits (63), Expect = 10.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3 / +2

                                   
Query: 9    PQSHARTHPLDARTHARTHSTHA 77
            P  H  TH   ARTHARTH+  A
Sbjct: 965  PHHHHTTHTPVARTHARTHARTA 1033



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>LOC_Os07g31590:12007.t02846:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 3878

 Score = 31.8 bits (63), Expect = 10.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -1 / +1

                                                   
Query: 841  IVLQMLTRYHYYHFVYHPDDCMHYFEHLQREKSSKKDHK 725
            IV+   TR++Y + +   D+ +HYF+  + E  ++ + K
Sbjct: 1885 IVIDDCTRFYYVYLLKTKDEALHYFKIYKAEVENQLERK 2001



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>LOC_Os07g31560:12007.t02844:unspliced-genomic hypothetical protein|
          Length = 1025

 Score = 31.8 bits (63), Expect = 10.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2 / -2

                                              
Query: 480 TIPYSM*EEYKPCNIKDDSKEEQESVSPAKSLTTT 376
           T P S+ EEY P ++ DD+       SP+ S +++
Sbjct: 835 TTPSSLREEYSPSSLVDDASPSSSRASPSSSSSSS 731


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 401,425,849
Number of extensions: 5760305
Number of successful extensions: 21666
Number of sequences better than 10.0: 23
Length of query: 396
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 346
Effective length of database: 52,799,986
Effective search space: 18268795156
Effective search space used: 18268795156
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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