| Clone Name | FLbaf50k19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016899.1| Zea mays clone Contig732 mRNA sequence Length = 1076 Score = 398 bits (201), Expect = e-107 Identities = 392/455 (86%), Gaps = 3/455 (0%) Strand = Plus / Minus Query: 439 gttgcatggtttatactcttctcacatgctatatggaatagtacccctgatgagaagtat 498 ||||| |||||||||||||||||||||||||| |||| || || |||||||| |||||| Sbjct: 1068 gttgcttggtttatactcttctcacatgctatctggactattaatcctgatgataagtat 1009 Query: 499 ggtcaactttttgtcttctcactcagacttgcattgtggatgcaaactattgggttttca 558 |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1008 ggtcaactgtttgttttctcactcagacttgcattgtggatgcaaatcattgggttttca 949 Query: 559 gtgaggtttttgtcttcatttatatggatccagatgtacaggttaggggtctcatcaagc 618 || |||||||||||||| || ||||||| |||||||| || |||||| || | | | Sbjct: 948 gtcaggtttttgtcttcgttcttatggattcagatgtatagattagggccttctttcacc 889 Query: 619 acgccaacgtattatgaagcaaa---tgatgcaagaaatagtttcttgagccccagatct 675 |||||||| |||| |||| | || ||| ||||||| ||||||||||||||| |||||| Sbjct: 888 acgccaacatattttgaaaccaaccatgaagcaagaactagtttcttgagccctagatct 829 Query: 676 aattcagttagacggggttcagtggctgatgatatattgggtggttctatttatgatcct 735 |||||||||||||| ||| |||| ||||||||||| || ||||| || ||||||||| Sbjct: 828 gattcagttagacggaattccatggcagatgatatattagggggttcaatctatgatcct 769 Query: 736 tcttactactcttctctctttgaagatgttcgaaataatgcatgcaatcatcagggtgat 795 ||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 768 tcttactactcgtcactgtttgaggatgttcgaaacaatgcatgcaatcatcagggtgat 709 Query: 796 aaacaaagtggtagtaatgatagcgggtcaacatctgcaggacaatctccacggcttaaa 855 |||||||||||||||||||| || || |||||||| || || || |||||||| |||||| Sbjct: 708 aaacaaagtggtagtaatgacagtggttcaacatccgcgggccagtctccacgacttaaa 649 Query: 856 tcttttggtagtagatcttttctttctaatgatgt 890 ||||||| | |||||||| |||| |||||||||| Sbjct: 648 tcttttgcttgtagatctcttctggctaatgatgt 614
>ref|NM_001065743.1| Oryza sativa (japonica cultivar-group) Os07g0223700 (Os07g0223700) mRNA, complete cds Length = 747 Score = 351 bits (177), Expect = 4e-93 Identities = 312/357 (87%) Strand = Plus / Plus Query: 202 atcgggccgcgggtgcgctccttcctgcgtgactacgacgcgctccagtccctcgccctc 261 |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 52 atcgggccgcggctgcgctccttcctccgcgactacgacgcgctccagtcgctcgccctc 111 Query: 262 gccctcatatacctccagattggttgtgcgctgattggatcgcttgctgcgctgttcaat 321 |||||||| ||||||||||||||||||||||||||||| || |||| || |||||||| Sbjct: 112 gccctcatctacctccagattggttgtgcgctgattgggtcacttggagcattgttcaat 171 Query: 322 ggggttcttgtgataaaccttgtgatagggctatttgctgttgttgcgattgaaagtagt 381 || ||||||||||| ||||| || || ||||| |||||||||||||| ||||| ||||| Sbjct: 172 ggcgttcttgtgatcaacctggtaattgggctctttgctgttgttgcaattgagagtagc 231 Query: 382 agtcaaagacttggccggacttacgctctcctgctcttctttgctatcgtccttgatgtt 441 || || | |||||| ||||| || || |||| || ||||| ||||| || ||||||||| Sbjct: 232 agccagacacttggtcggacatatgcagtccttctgttcttcgctattgttcttgatgtt 291 Query: 442 gcatggtttatactcttctcacatgctatatggaatagtacccctgatgagaagtatggt 501 || |||||||| ||||||||||||||||||||||||| ||| ||||| |||||||||||| Sbjct: 292 gcttggtttattctcttctcacatgctatatggaatattactcctgaagagaagtatggt 351 Query: 502 caactttttgtcttctcactcagacttgcattgtggatgcaaactattgggttttca 558 |||||||| || || ||||||| ||| || ||||||||||||| ||||||||||||| Sbjct: 352 caacttttcgttttatcactcaaactagcgttgtggatgcaaattattgggttttca 408 Score = 258 bits (130), Expect = 4e-65 Identities = 240/276 (86%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 604 ggggtctcatcaagcacgccaacgtattatgaagcaaa---tgatgcaagaaatagtttc 660 ||||| ||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||| Sbjct: 421 ggggtttcatcaagcaccccaacatatcatgaagtaaactatgatggaagaaatagtttc 480 Query: 661 ttgagccccagatctaattcagttagacggggttcagtggctgatgatatattgggtggt 720 |||||||| ||||| | |||||||||||| ||| ||||||||||||||||||||||| Sbjct: 481 ttgagcccaagatcaagttcagttagacgaaattccatggctgatgatatattgggtggt 540 Query: 721 tctatttatgatccttcttactactcttctctctttgaagatgttcgaaataatgcatgc 780 ||||||||||||||| | ||||| |||||||| || | ||||| ||||| || ||||| Sbjct: 541 tctatttatgatcctgcctactattcttctcttttcgcggatgtccgaaacaacacatgc 600 Query: 781 aatcatcagggtgataaacaaagtggtagtaatgatagcgggtcaacatctgcaggacaa 840 | |||||||||||||||||||||||||||||||||||| || ||||||||||| || ||| Sbjct: 601 actcatcagggtgataaacaaagtggtagtaatgatagtggatcaacatctgcgggtcaa 660 Query: 841 tctccacggcttaaatcttttggtagtagatctttt 876 |||||||| ||||||||||||| |||||||||||| Sbjct: 661 tctccacgacttaaatcttttgccagtagatctttt 696
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 276 bits (139), Expect = 2e-70 Identities = 276/321 (85%), Gaps = 3/321 (0%) Strand = Plus / Plus Query: 473 ggaatagtacccctgatgagaagtatggtcaactttttgtcttctcactcagacttgcat 532 |||||| ||| ||||| |||||||||||||||||||| || || ||||||| ||| || | Sbjct: 6875922 ggaatattactcctgaagagaagtatggtcaacttttcgttttatcactcaaactagcgt 6875981 Query: 533 tgtggatgcaaactattgggttttcagtgaggtttttgtcttcatttatatggatccaga 592 |||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 6875982 tgtggatgcaaattattgggttttcagtaaggtttttgtcttccttcatatggatccaga 6876041 Query: 593 tgtacaggttaggggtctcatcaagcacgccaacgtattatgaagcaa---atgatgcaa 649 |||| ||| | ||||| ||||||||||| ||||| ||| |||||| || |||||| || Sbjct: 6876042 tgtataggctgggggtttcatcaagcaccccaacatatcatgaagtaaactatgatggaa 6876101 Query: 650 gaaatagtttcttgagccccagatctaattcagttagacggggttcagtggctgatgata 709 ||||||||||||||||||| ||||| | |||||||||||| ||| |||||||||||| Sbjct: 6876102 gaaatagtttcttgagcccaagatcaagttcagttagacgaaattccatggctgatgata 6876161 Query: 710 tattgggtggttctatttatgatccttcttactactcttctctctttgaagatgttcgaa 769 |||||||||||||||||||||||||| | ||||| |||||||| || | ||||| |||| Sbjct: 6876162 tattgggtggttctatttatgatcctgcctactattcttctcttttcgcggatgtccgaa 6876221 Query: 770 ataatgcatgcaatcatcagg 790 | || |||||| |||||||| Sbjct: 6876222 acaacacatgcactcatcagg 6876242 Score = 155 bits (78), Expect = 4e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 277 cagattggttgtgcgctgattggatcgcttgctgcgctgttcaatggggttcttgtgata 336 ||||||||||||||||||||||| || |||| || |||||||||| ||||||||||| Sbjct: 6875172 cagattggttgtgcgctgattgggtcacttggagcattgttcaatggcgttcttgtgatc 6875231 Query: 337 aaccttgtgatagggctatttgctgttgttgcgattgaaagtagtagtcaaagacttggc 396 ||||| || || ||||| |||||||||||||| ||||| ||||| || || | |||||| Sbjct: 6875232 aacctggtaattgggctctttgctgttgttgcaattgagagtagcagccagacacttggt 6875291 Query: 397 cggacttacgctctcctgctcttctttgctatcgtccttgatgttgcatggtttatactc 456 ||||| || || |||| || ||||| ||||| || ||||||||||| |||||||| ||| Sbjct: 6875292 cggacatatgcagtccttctgttcttcgctattgttcttgatgttgcttggtttattctc 6875351 Query: 457 ttctcacatgctatatgg 474 |||||||||||||||||| Sbjct: 6875352 ttctcacatgctatatgg 6875369 Score = 129 bits (65), Expect = 2e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 787 cagggtgataaacaaagtggtagtaatgatagcgggtcaacatctgcaggacaatctcca 846 |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||| Sbjct: 6876543 cagggtgataaacaaagtggtagtaatgatagtggatcaacatctgcgggtcaatctcca 6876602 Query: 847 cggcttaaatcttttggtagtagatcttttctttctaatgatgtaagtc 895 || ||||||||||||| |||||||||||| | | ||||||||||||| Sbjct: 6876603 cgacttaaatcttttgccagtagatcttttgtggccaatgatgtaagtc 6876651 Score = 115 bits (58), Expect = 4e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 202 atcgggccgcgggtgcgctccttcctgcgtgactacgacgcgctccagtccctcgccctc 261 |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 6873706 atcgggccgcggctgcgctccttcctccgcgactacgacgcgctccagtcgctcgccctc 6873765 Query: 262 gccctcatatacctccag 279 |||||||| ||||||||| Sbjct: 6873766 gccctcatctacctccag 6873783
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 276 bits (139), Expect = 2e-70 Identities = 276/321 (85%), Gaps = 3/321 (0%) Strand = Plus / Plus Query: 473 ggaatagtacccctgatgagaagtatggtcaactttttgtcttctcactcagacttgcat 532 |||||| ||| ||||| |||||||||||||||||||| || || ||||||| ||| || | Sbjct: 32177 ggaatattactcctgaagagaagtatggtcaacttttcgttttatcactcaaactagcgt 32236 Query: 533 tgtggatgcaaactattgggttttcagtgaggtttttgtcttcatttatatggatccaga 592 |||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 32237 tgtggatgcaaattattgggttttcagtaaggtttttgtcttccttcatatggatccaga 32296 Query: 593 tgtacaggttaggggtctcatcaagcacgccaacgtattatgaagcaa---atgatgcaa 649 |||| ||| | ||||| ||||||||||| ||||| ||| |||||| || |||||| || Sbjct: 32297 tgtataggctgggggtttcatcaagcaccccaacatatcatgaagtaaactatgatggaa 32356 Query: 650 gaaatagtttcttgagccccagatctaattcagttagacggggttcagtggctgatgata 709 ||||||||||||||||||| ||||| | |||||||||||| ||| |||||||||||| Sbjct: 32357 gaaatagtttcttgagcccaagatcaagttcagttagacgaaattccatggctgatgata 32416 Query: 710 tattgggtggttctatttatgatccttcttactactcttctctctttgaagatgttcgaa 769 |||||||||||||||||||||||||| | ||||| |||||||| || | ||||| |||| Sbjct: 32417 tattgggtggttctatttatgatcctgcctactattcttctcttttcgcggatgtccgaa 32476 Query: 770 ataatgcatgcaatcatcagg 790 | || |||||| |||||||| Sbjct: 32477 acaacacatgcactcatcagg 32497 Score = 155 bits (78), Expect = 4e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 277 cagattggttgtgcgctgattggatcgcttgctgcgctgttcaatggggttcttgtgata 336 ||||||||||||||||||||||| || |||| || |||||||||| ||||||||||| Sbjct: 31427 cagattggttgtgcgctgattgggtcacttggagcattgttcaatggcgttcttgtgatc 31486 Query: 337 aaccttgtgatagggctatttgctgttgttgcgattgaaagtagtagtcaaagacttggc 396 ||||| || || ||||| |||||||||||||| ||||| ||||| || || | |||||| Sbjct: 31487 aacctggtaattgggctctttgctgttgttgcaattgagagtagcagccagacacttggt 31546 Query: 397 cggacttacgctctcctgctcttctttgctatcgtccttgatgttgcatggtttatactc 456 ||||| || || |||| || ||||| ||||| || ||||||||||| |||||||| ||| Sbjct: 31547 cggacatatgcagtccttctgttcttcgctattgttcttgatgttgcttggtttattctc 31606 Query: 457 ttctcacatgctatatgg 474 |||||||||||||||||| Sbjct: 31607 ttctcacatgctatatgg 31624 Score = 129 bits (65), Expect = 2e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 787 cagggtgataaacaaagtggtagtaatgatagcgggtcaacatctgcaggacaatctcca 846 |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||| Sbjct: 32798 cagggtgataaacaaagtggtagtaatgatagtggatcaacatctgcgggtcaatctcca 32857 Query: 847 cggcttaaatcttttggtagtagatcttttctttctaatgatgtaagtc 895 || ||||||||||||| |||||||||||| | | ||||||||||||| Sbjct: 32858 cgacttaaatcttttgccagtagatcttttgtggccaatgatgtaagtc 32906 Score = 115 bits (58), Expect = 4e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 202 atcgggccgcgggtgcgctccttcctgcgtgactacgacgcgctccagtccctcgccctc 261 |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 29961 atcgggccgcggctgcgctccttcctccgcgactacgacgcgctccagtcgctcgccctc 30020 Query: 262 gccctcatatacctccag 279 |||||||| ||||||||| Sbjct: 30021 gccctcatctacctccag 30038
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 129 bits (65), Expect = 2e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 787 cagggtgataaacaaagtggtagtaatgatagcgggtcaacatctgcaggacaatctcca 846 |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||| Sbjct: 358 cagggtgataaacaaagtggtagtaatgatagtggatcaacatctgcgggtcaatctcca 417 Query: 847 cggcttaaatcttttggtagtagatcttttctttctaatgatgtaagtc 895 || ||||||||||||| |||||||||||| | | ||||||||||||| Sbjct: 418 cgacttaaatcttttgccagtagatcttttgtggccaatgatgtaagtc 466
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 44.1 bits (22), Expect = 1.1 Identities = 49/58 (84%) Strand = Plus / Minus Query: 364 gttgcgattgaaagtagtagtcaaagacttggccggacttacgctctcctgctcttct 421 ||||| ||||| ||||||||||| || ||||| || ||||| ||| |||| ||||||| Sbjct: 1974 gttgcaattgagagtagtagtcagagccttggacgcacttatgctttccttctcttct 1917
>emb|AL121983.13|HSA160H22 Human DNA sequence from clone RP11-160H22 on chromosome 1q23.2-24.3 Contains three novel genes, a ribosomal protein L30 (RPL30) pseudogene, the 3' end of a novel gene, the 5' end of a novel gene (KIAA2025) and a CpG island, complete sequence Length = 165436 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1125 tatatgacaaattctgctctat 1146 |||||||||||||||||||||| Sbjct: 59733 tatatgacaaattctgctctat 59754
>dbj|AK233233.1| Sus scrofa mRNA, clone:LVRM10108B10, expressed in liver Length = 1692 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 414 ttactactattctgtctttgaagatgttc 386
>dbj|AK235630.1| Sus scrofa mRNA, clone:OVRM10099C06, expressed in ovary Length = 1570 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 292 ttactactattctgtctttgaagatgttc 264
>ref|XM_001145114.1| PREDICTED: Pan troglodytes zinc finger, A20 domain containing 3 (ZFAND6), mRNA Length = 1574 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 341 ttactactattctgtctttgaagatgttc 313
>ref|XM_001109133.1| PREDICTED: Macaca mulatta similar to zinc finger, A20 domain containing 3 (LOC717543), mRNA Length = 1556 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 323 ttactactattctgtctttgaagatgttc 295
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 871 tcttttctttctaatgatgta 891 ||||||||||||||||||||| Sbjct: 131760 tcttttctttctaatgatgta 131780
>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence Length = 35334 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 871 tcttttctttctaatgatgta 891 ||||||||||||||||||||| Sbjct: 11281 tcttttctttctaatgatgta 11301
>ref|XM_856136.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 11 (LOC479064), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 228 ttactactattctgtctttgaagatgttc 200
>ref|XM_856107.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 10 (LOC479064), mRNA Length = 1647 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 381 ttactactattctgtctttgaagatgttc 353
>ref|XM_856075.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 9 (LOC479064), mRNA Length = 1583 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 317 ttactactattctgtctttgaagatgttc 289
>ref|XM_856048.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 8 (LOC479064), mRNA Length = 1480 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 214 ttactactattctgtctttgaagatgttc 186
>ref|XM_845193.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 2 (LOC479064), mRNA Length = 1700 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 389 ttactactattctgtctttgaagatgttc 361
>ref|XM_855991.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 7 (LOC479064), mRNA Length = 1567 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 298 ttactactattctgtctttgaagatgttc 270
>ref|XM_855963.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 6 (LOC479064), mRNA Length = 1537 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 298 ttactactattctgtctttgaagatgttc 270
>ref|XM_536211.2| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 1 (LOC479064), mRNA Length = 1655 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 389 ttactactattctgtctttgaagatgttc 361
>ref|XM_855909.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 5 (LOC479064), mRNA Length = 1839 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 576 ttactactattctgtctttgaagatgttc 548
>ref|XM_855878.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 4 (LOC479064), mRNA Length = 776 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 389 ttactactattctgtctttgaagatgttc 361
>ref|XM_855848.1| PREDICTED: Canis familiaris similar to zinc finger, A20 domain containing 3, transcript variant 3 (LOC479064), mRNA Length = 1839 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 576 ttactactattctgtctttgaagatgttc 548
>ref|NM_019006.2| Homo sapiens zinc finger, AN1-type domain 6 (ZFAND6), mRNA gb|BC005283.1| Homo sapiens zinc finger, AN1-type domain 6, mRNA (cDNA clone MGC:12336 IMAGE:4042180), complete cds Length = 1709 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 445 ttactactattctgtctttgaagatgttc 417
>gb|AC092701.2| Homo sapiens chromosome 15, clone RP11-758M2, complete sequence Length = 171403 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 24933 ttactactattctgtctttgaagatgttc 24961
>ref|NM_001034460.1| Bos taurus zinc finger, A20 domain containing 3 (ZA20D3), mRNA gb|BC102651.1| Bos taurus zinc finger, A20 domain containing 3, mRNA (cDNA clone MGC:127770 IMAGE:7961701), complete cds Length = 1402 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 482 ttactactattctgtctttgaagatgttc 454
>dbj|AB208218.1| Atelerix albiventris DNA, INT298 locus sequence Length = 800 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tatactcttctcacatgctat 470 ||||||||||||||||||||| Sbjct: 541 tatactcttctcacatgctat 521
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 871 tcttttctttctaatgatgta 891 ||||||||||||||||||||| Sbjct: 15454215 tcttttctttctaatgatgta 15454195
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 871 tcttttctttctaatgatgta 891 ||||||||||||||||||||| Sbjct: 18220316 tcttttctttctaatgatgta 18220336
>emb|AL583853.6| Human DNA sequence from clone RP11-139I17 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM), complete sequence Length = 169288 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 995 tcatttaagttggattttgat 1015 ||||||||||||||||||||| Sbjct: 38538 tcatttaagttggattttgat 38558
>gb|AF261138.1|AF261138 Homo sapiens HT032 mRNA, complete cds Length = 1492 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 227 ttactactattctgtctttgaagatgttc 199
>emb|AL136598.1|HSM801572 Homo sapiens mRNA; cDNA DKFZp564F2116 (from clone DKFZp564F2116) Length = 1512 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 248 ttactactattctgtctttgaagatgttc 220
>emb|CR623709.1| full-length cDNA clone CS0DN005YM23 of Adult brain of Homo sapiens (human) Length = 1398 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 152 ttactactattctgtctttgaagatgttc 124
>emb|CR622869.1| full-length cDNA clone CS0DI069YH08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1259 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 47 ttactactattctgtctttgaagatgttc 19
>emb|CR621158.1| full-length cDNA clone CS0DI016YH22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1454 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 247 ttactactattctgtctttgaagatgttc 219
>emb|CR615027.1| full-length cDNA clone CS0DI066YK07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1556 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 344 ttactactattctgtctttgaagatgttc 316
>emb|CR606269.1| full-length cDNA clone CS0DF005YF20 of Fetal brain of Homo sapiens (human) Length = 1602 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 379 ttactactattctgtctttgaagatgttc 351
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 871 tcttttctttctaatgatgta 891 ||||||||||||||||||||| Sbjct: 124997 tcttttctttctaatgatgta 124977
>emb|CR533476.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0817D for gene AWP1, protein associated with PRK1; complete cds, incl. stopcodon Length = 736 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 134 ttactactattctgtctttgaagatgttc 106
>emb|AJ251095.1|HSA251095 Homo sapiens mRNA for PRK1-associated protein AWP1 (AWP1 gene) Length = 1451 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 190 ttactactattctgtctttgaagatgttc 162
>gb|AF061739.1|AF061739 Homo sapiens unknown mRNA Length = 1613 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 738 ttactactcttctctctttgaagatgttc 766 |||||||| |||| ||||||||||||||| Sbjct: 378 ttactactattctgtctttgaagatgttc 350 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 205,106,707 Number of extensions: 10876993 Number of successful extensions: 208584 Number of sequences better than 10.0: 42 Number of HSP's gapped: 208578 Number of HSP's successfully gapped: 50 Length of query: 1189 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1166 Effective length of database: 18,503,978,556 Effective search space: 21575638996296 Effective search space used: 21575638996296 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)