ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49p03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK060103:Os11g0649600 87 2e-17
2AK059842:Os11g0649700 39 0.005

>AK060103:Os11g0649600 |
          Length = 204
 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
 Frame = +3

Query: 228 QCTVVLPNGAEAHTVTYSDFGPFXXXXXXXXXXXXXXXXXIFLSVWKKGSNKVSRXXXXX 407
           QCT+ L  G   HT+TY DFGPF                 IFL++ KK     ++     
Sbjct: 42  QCTIFLYYGGPLHTITYKDFGPFVYLVVASSIGAFMEAIAIFLTICKKKDGTPAKVLLPL 101

Query: 408 XXXXXXXXXYSSTGAAFATSEYMSYCSPHGRGRISVCDGTVRGSNNFCSQVHMAMYISLX 587
                    YS+T AAFA  + MSYC+  G+ R+ VC  T   + NFC+QVH+AMY+SL 
Sbjct: 102 LDAAVPVLLYSATAAAFAAGD-MSYCAV-GK-RVGVC--TTAAAGNFCNQVHIAMYVSLA 156

Query: 588 XXXXXXXXELVKNLTLSFXXXXXXXXXXAG---------CEHGCHHKH 704
                   E+VK+   S                      C HGCH KH
Sbjct: 157 AGVALLVAEIVKHWPDSGKKKEGGGGGCGSDSDSDKSTPCHHGCHSKH 204



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>AK059842:Os11g0649700 |
          Length = 184

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 8/146 (5%)
 Frame = +3

Query: 228 QCTVVLPNGAEAHTVTYSDFGPFXXXXXXXXXXXXXXXXXIFLSVWKKGSN--------K 383
           +CTVV  NG  A T+TY DF PF                 I+L +   G +        K
Sbjct: 42  ECTVVQLNGVVA-TITYKDFPPFVYLVGFNIAAAMLEAAAIYLRLSTGGGDDDDEGFKGK 100

Query: 384 VSRXXXXXXXXXXXXXXYSSTGAAFATSEYMSYCSPHGRGRISVCDGTVRGSNNFCSQVH 563
           +                Y++TG AFA        S +G  +I+ C     G+  FC QVH
Sbjct: 101 LPGILLVVIDVAVQALVYTATGGAFAA------VSAYGP-QINACGA---GAGRFCGQVH 150

Query: 564 MAMYISLXXXXXXXXXELVKNLTLSF 641
            +  +S           + ++++L F
Sbjct: 151 QSKLLSFAGSAAVGLAVVFRDVSLPF 176


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,673,633
Number of extensions: 265391
Number of successful extensions: 804
Number of sequences better than 10.0: 2
Number of HSP's gapped: 801
Number of HSP's successfully gapped: 2
Length of query: 304
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 204
Effective length of database: 11,395,755
Effective search space: 2324734020
Effective search space used: 2324734020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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