>LOC_Os11g42960:12011.t03826:unspliced-genomic plant integral membrane protein TIGR01569 containing protein,|
expressed
Length = 1314
Score = 40.9 bits (83), Expect(3) = 2e-10
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 228 QCTVVLPNGAEAHTVTYSDFGPF 296
QCT+ L G HT+TY DFGPF
Sbjct: 271 QCTIFLYYGGPLHTITYKDFGPF 339
Score = 39.6 bits (80), Expect(3) = 2e-10
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3 / +3
Query: 525 TVRGSNNFCSQVHMAMYISLXXXXXXXXXELVKN 626
T + NFC+QVH+AMY+SL E+VK+
Sbjct: 654 TTAAAGNFCNQVHIAMYVSLAAGVALLVAEIVKH 755
Score = 27.2 bits (53), Expect(3) = 2e-10
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +3
Query: 678 CEHGCHHKH* 707
C HGCH KH*
Sbjct: 834 CHHGCHSKH* 863
Score = 40.9 bits (83), Expect(3) = 5e-09
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -2 / -1
Query: 302 VHKGAEVAVGDGVCLGAVREDDGALA 225
VH+GA+V VGDGV AV E+DGALA
Sbjct: 345 VHEGAKVLVGDGVERAAVVEEDGALA 268
Score = 34.5 bits (69), Expect(3) = 5e-09
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 580 EMYMAMCTWLQKLFEPRTVPSQT 512
E YMAMCTWLQKL V + T
Sbjct: 709 ETYMAMCTWLQKLPAAAVVQTPT 641
Score = 27.6 bits (54), Expect(3) = 5e-09
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2 / -2
Query: 371 LLPYAQENGRPHHDRRQGVRHHQV 300
LL QE+G H+R RHHQ+
Sbjct: 515 LLADGQEDGDRLHERPDRARHHQI 444
Score = 37.7 bits (76), Expect(2) = 0.001
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 301 YTKGPKSL*VTVCASAPFGRTTVHWL 224
YTKGPKSL*V V P R VHWL
Sbjct: 344 YTKGPKSL*VMVWRGPP**RKMVHWL 267
Score = 27.6 bits (54), Expect(2) = 0.001
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 578 DVHGHVHLAAEV 543
DVHG+VHL AEV
Sbjct: 707 DVHGNVHLVAEV 672
Score = 26.3 bits (51), Expect(3) = 0.30
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 544 TSAARCTWPCT 576
TSA RCT PCT
Sbjct: 673 TSATRCTLPCT 705
Score = 24.9 bits (48), Expect(3) = 0.30
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 265 TPSPTATSAPLC 300
TPSPT T AP C
Sbjct: 308 TPSPTRTLAPSC 343
Score = 24.0 bits (46), Expect(3) = 0.30
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 658 TPTRTPAASMGATTSIS 708
TPT P A+M A SIS
Sbjct: 814 TPTSQPLATMAAIASIS 864
>LOC_Os12g38450:12012.t03526:unspliced-genomic xyloglucan galactosyltransferase KATAMARI 1, putative, expressed|
Length = 1748
Score = 29.5 bits (58), Expect(2) = 4.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1 / -2
Query: 631 RCPSEAPGRTPTRTPAASMGAT 696
RC PGRTP+R + GAT
Sbjct: 1324 RCARRPPGRTPSRRRGPAAGAT 1259
Score = 24.0 bits (46), Expect(2) = 4.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 82 SSSPPSGRSCLAMI 123
SSSPP G CL ++
Sbjct: 1541 SSSPPGGSPCLILL 1500
>LOC_Os10g25340:12010.t01955:unspliced-genomic esterase precursor, putative, expressed|
Length = 3668
Score = 31.8 bits (63), Expect = 7.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / +2
Query: 634 CPSEAPGRTPTRTPAASMGATTS 702
C AP T TRTPAA G+T+S
Sbjct: 2648 CSPRAPPPTTTRTPAAMRGSTSS 2716
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 239,396,662
Number of extensions: 2645433
Number of successful extensions: 13361
Number of sequences better than 10.0: 13
Length of query: 304
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 255
Effective length of database: 52,856,264
Effective search space: 13478347320
Effective search space used: 13478347320
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)