Clone Information

BLAST Search Result

Clone Name	FLbaf52e16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q05CL8:LARP7_MOUSE La-related protein 7 - Mus musculus (Mouse)	84	2e-15
2	Q28G87:LARP7_XENTR La-related protein 7 - Xenopus tropicalis (We...	82	6e-15
3	Q5XI01:LARP7_RAT La-related protein 7 - Rattus norvegicus (Rat)	82	8e-15
4	Q4R627:LARP7_MACFA La-related protein 7 - Macaca fascicularis (C...	81	1e-14
5	Q4G0J3:LARP7_HUMAN La-related protein 7 - Homo sapiens (Human)	81	1e-14
6	Q7ZWE3:LARP7_DANRE La-related protein 7 - Danio rerio (Zebrafish...	79	5e-14
7	Q9BRS8:LARP6_HUMAN La-related protein 6 - Homo sapiens (Human)	64	3e-09
8	P33399:LAH1_YEAST La protein homolog - Saccharomyces cerevisiae ...	64	3e-09
9	Q8BN59:LARP6_MOUSE La-related protein 6 - Mus musculus (Mouse)	63	4e-09
10	P40796:LA_DROME La protein homolog - Drosophila melanogaster (Fr...	62	9e-09
11	Q26457:LA_AEDAL La protein homolog - Aedes albopictus (Forest da...	57	4e-07
12	P87058:LAH1_SCHPO La protein homolog - Schizosaccharomyces pombe...	52	1e-05
13	Q9VAW5:LARP_DROME La-related protein - Drosophila melanogaster (...	50	4e-05
14	P05455:LA_HUMAN Lupus La protein - Homo sapiens (Human)	47	4e-04
15	P10881:LA_BOVIN Lupus La protein homolog - Bos taurus (Bovine)	47	4e-04
16	P32067:LA_MOUSE Lupus La protein homolog - Mus musculus (Mouse)	45	0.001
17	Q6PKG0:LARP1_HUMAN La-related protein 1 - Homo sapiens (Human)	45	0.001
18	Q6ZQ58:LARP1_MOUSE La-related protein 1 - Mus musculus (Mouse)	44	0.002
19	P38656:LA_RAT Lupus La protein homolog - Rattus norvegicus (Rat)	44	0.002
20	P28049:LAB_XENLA Lupus La protein homolog B - Xenopus laevis (Af...	44	0.003
21	P25567:SRO9_YEAST RNA-binding protein SRO9 - Saccharomyces cerev...	43	0.005
22	P28048:LAA_XENLA Lupus La protein homolog A - Xenopus laevis (Af...	40	0.046
23	Q12034:SLF1_YEAST Protein SLF1 - Saccharomyces cerevisiae (Baker...	39	0.078
24	Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein...	37	0.23
25	Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapien...	36	0.51
26	Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich...	35	1.5
27	Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo s...	35	1.5
28	O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis th...	34	2.5
29	Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xeno...	34	2.5
30	Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, t...	33	3.3
31	Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, t...	33	3.3
32	P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and...	33	4.3
33	Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapien...	33	4.3
34	Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norveg...	33	4.3
35	Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygma...	33	4.3
36	P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculu...	33	4.3
37	P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapien...	33	4.3
38	P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus ...	33	4.3
39	Q19706:IF34_CAEEL Probable eukaryotic translation initiation fac...	33	5.6
40	Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - X...	33	5.6
41	Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by...	32	7.3
42	P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus l...	32	7.3
43	P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygma...	32	7.3
44	P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglod...	32	7.3
45	Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mula...	32	7.3
46	P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates l...	32	7.3
47	Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapien...	32	7.3
48	P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gor...	32	7.3
49	Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by...	32	9.5

>Q05CL8:LARP7_MOUSE La-related protein 7 - Mus musculus (Mouse)|
          Length = 570
 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 59/196 (30%), Positives = 94/196 (47%)
 Frame = +1

Query: 502  EPEPEMERATPAIAKPAVDGLTDDVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYV 681
            E +  ME +T    +         V+  I KQV+++F D NL   + L   I K   GYV
Sbjct: 4    ENQKTMEESTKRKEEKKKRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYV 63

Query: 682  PISVIAGFKKIKAFVHNNPMLAAALRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVV 861
             IS++  F K+K    +  ++A AL++SS + +  +G R++R+ P  E    E + R V 
Sbjct: 64   DISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDE-EERTVY 122

Query: 862  AENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVE 1041
             E LP + ++  + ++F   G+V  I   + ++   P                K  AFVE
Sbjct: 123  VELLPKNVTHSWIERVFGKCGNVVYISIPHYKSTGDP----------------KGFAFVE 166

Query: 1042 YETHEDAEKAILELND 1089
            +ET E A KAI  LN+
Sbjct: 167  FETKEQAAKAIEFLNN 182

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>Q28G87:LARP7_XENTR La-related protein 7 - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 593

 Score = 82.4 bits (202), Expect = 6e-15
 Identities = 53/168 (31%), Positives = 86/168 (51%)
 Frame = +1

Query: 586  ITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRTS 765
            I KQV+++F D+NL     L   I K   GY+ IS++A F K+K    ++ ++A A++ S
Sbjct: 40   IAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNS 99

Query: 766  SKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVRTIRT 945
            S + ++  G +++RR P  E   Q+  SR V  E LP + ++  + ++F   G V  +  
Sbjct: 100  SVVEINLSGTKIRRRFPLGEKP-QDVDSRTVYVELLPKNVTHSWIERVFGKYGMV--VYV 156

Query: 946  CYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
              P+  +   P              K  AF+E+ET E A KAI  LN+
Sbjct: 157  SIPRYKSTGDP--------------KGFAFIEFETQEQAAKAIEVLNN 190

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>Q5XI01:LARP7_RAT La-related protein 7 - Rattus norvegicus (Rat)|
          Length = 571

 Score = 82.0 bits (201), Expect = 8e-15
 Identities = 55/172 (31%), Positives = 86/172 (50%)
 Frame = +1

Query: 574  VVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAA 753
            V+  I KQV+++F D NL     L   I K   GYV IS++  F K+K    +  ++A A
Sbjct: 29   VLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARA 88

Query: 754  LRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVR 933
            L++SS + +  +G R++R+ P  E    E + R V  E LP + ++  + ++F   G+V 
Sbjct: 89   LKSSSVVELDLEGTRIRRKKPLGERPKDE-EERTVYVELLPKNVTHSWIERVFGKCGNVV 147

Query: 934  TIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
             I   + ++   P                K  AFVE+ET E A KAI  LN+
Sbjct: 148  YISIPHYKSTGDP----------------KGFAFVEFETKEQAAKAIEFLNN 183

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>Q4R627:LARP7_MACFA La-related protein 7 - Macaca fascicularis (Crab eating macaque)|
            (Cynomolgus monkey)
          Length = 581

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 55/172 (31%), Positives = 85/172 (49%)
 Frame = +1

Query: 574  VVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAA 753
            V+  I KQV+++F D NL     L   I K   GYV IS++  F K+K    +  ++A A
Sbjct: 34   VLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARA 93

Query: 754  LRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVR 933
            LR+S+ + +  +G R++R+ P  E    E   R V  E LP + ++  + ++F   G+V 
Sbjct: 94   LRSSAVVELDLEGTRIRRKKPLGERPKDE-DERTVYVELLPKNVNHSWIERVFGKCGNVV 152

Query: 934  TIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
             I   + ++   P                K  AFVE+ET E A KAI  LN+
Sbjct: 153  YISIPHYKSTGDP----------------KGFAFVEFETKEQAAKAIEFLNN 188

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>Q4G0J3:LARP7_HUMAN La-related protein 7 - Homo sapiens (Human)|
          Length = 582

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 55/172 (31%), Positives = 85/172 (49%)
 Frame = +1

Query: 574  VVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAA 753
            V+  I KQV+++F D NL     L   I K   GYV IS++  F K+K    +  ++A A
Sbjct: 34   VLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARA 93

Query: 754  LRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVR 933
            LR+S+ + +  +G R++R+ P  E    E   R V  E LP + ++  + ++F   G+V 
Sbjct: 94   LRSSAVVELDLEGTRIRRKKPLGERPKDE-DERTVYVELLPKNVNHSWIERVFGKCGNVV 152

Query: 934  TIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
             I   + ++   P                K  AFVE+ET E A KAI  LN+
Sbjct: 153  YISIPHYKSTGDP----------------KGFAFVEFETKEQAAKAIEFLNN 188

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>Q7ZWE3:LARP7_DANRE La-related protein 7 - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 555

 Score = 79.3 bits (194), Expect = 5e-14
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
 Frame = +1

Query: 574  VVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAA 753
            ++  + KQVE++F D+NL     +   I +   GY+ I+V+  F ++K    +  ++A A
Sbjct: 42   LLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARA 101

Query: 754  LRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVR 933
            L+ S+ + V+ +G R++R+ P  E+  ++  SR V  E LP   ++  L ++FS  G V 
Sbjct: 102  LKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHIWLERVFSKCGHVV 160

Query: 934  TIR-TCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
             I    Y  T +  G                  AFVE+ET E A+KA+  LN+
Sbjct: 161  YISIPRYKSTRHSKG-----------------FAFVEFETQEQAQKAVEMLNN 196

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>Q9BRS8:LARP6_HUMAN La-related protein 6 - Homo sapiens (Human)|
          Length = 491

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
 Frame = +1

Query: 568  DDVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLA 747
            +++++K+  Q+E+YFSD NL     L++ + ++  GYV + ++  FKK+K    +    A
Sbjct: 90   EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTA 149

Query: 748  AALRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPS------------- 888
             AL+ S  L ++ D ++V+R  P      +   S++++  +L   P              
Sbjct: 150  HALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRV 209

Query: 889  ----YQNLMKIFSAVGSVRTIRTCYP--QTPNGPGPATNRSAKLDMLFANKLHAFVEYET 1050
                 ++L+K+F   G + ++R   P  + P    P   R +        +  A VE+E 
Sbjct: 210  QEKVMEHLLKLFGTFGVISSVRILKPGRELP----PDIRRISSRYSQVGTQECAIVEFEE 265

Query: 1051 HEDAEKA 1071
             E A KA
Sbjct: 266  VEAAIKA 272

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>P33399:LAH1_YEAST La protein homolog - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 275

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
 Frame = +1

Query: 499 EEPEPEMERATPAIAKPAVDGLTDDVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGY 678
           E+ +P+  R + A+ +      T +V+ +  KQVE+YFS+ N    +  +R  ++   G+
Sbjct: 9   EQEKPQSRRNSFAVIE-----FTPEVLDRCLKQVEFYFSEFNF-PYDRFLRTTAEKNDGW 62

Query: 679 VPISVIAGFKKIKAFVHNNPMLAAALRTSSKLVVSGDGKRVKRRHPF----TESDMQEFQ 846
           VPIS IA F ++K +   + ++  ALR+S  L VS DG+ VKRR P       +   E  
Sbjct: 63  VPISTIATFNRMKKYRPVDKVI-EALRSSEILEVSADGENVKRRVPLDLTAARNARIEQN 121

Query: 847 SRIVVAENLPGD-------PSYQ-NLMKIFSAVGSVRTIR 942
            R +   N P +       P  Q NL   F  +G +  +R
Sbjct: 122 QRTLAVMNFPHEDVEASQIPELQENLEAFFKKLGEINQVR 161

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>Q8BN59:LARP6_MOUSE La-related protein 6 - Mus musculus (Mouse)|
          Length = 492

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
 Frame = +1

Query: 568  DDVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLA 747
            +++++K+  Q+E+YFSD NL     L++ + ++  GYV + ++  FKK+K    +    A
Sbjct: 90   EELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTA 149

Query: 748  AALRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPGDPS------------- 888
             AL+ S  L ++ D ++V+R  P      +   S++++  +L   P              
Sbjct: 150  HALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWALATPQKNGRV 209

Query: 889  ----YQNLMKIFSAVGSVRTIRTCYP--QTPNGPGPATNRSAKLDMLFANKLHAFVEYET 1050
                 ++L+K+F   G + ++R   P  + P    P   R +        +  A VE+E 
Sbjct: 210  QEKVMEHLLKLFGTFGVISSVRILKPGRELP----PDIRRISSRYSQVGTQECAIVEFEE 265

Query: 1051 HEDAEKA 1071
             + A KA
Sbjct: 266  VDAAIKA 272

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>P40796:LA_DROME La protein homolog - Drosophila melanogaster (Fruit fly)|
          Length = 390

 Score = 62.0 bits (149), Expect = 9e-09
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
 Frame = +1

Query: 487 AFVAEEPEPEMERATPAIAKPAVDGLTDDVVQKITKQVEYYFSDINLATTEHLVRFISKD 666
           A V E    + ++     A+ A  G T    + I +QVEYYF D NL   + L   I K+
Sbjct: 22  AQVLEAKNGDAKKDPAPAAEEAAGGFTKQE-RAIIRQVEYYFGDANLNRDKFLREQIGKN 80

Query: 667 PQGYVPISVIAGFKKIKAFVHNNPMLAAALRTSSK-LVVSGDGKRVKRRHP------FTE 825
             G+VP+SV+  FK++ +   +   + AAL  S + LV   + K   RRHP        E
Sbjct: 81  EDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNE 140

Query: 826 SDMQEFQSRIVVAENLPGDPSYQNLM 903
              +E Q R   A+  P D     L+
Sbjct: 141 ERRKEIQERTAYAKGFPLDSQISELL 166

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>Q26457:LA_AEDAL La protein homolog - Aedes albopictus (Forest day mosquito)|
          Length = 383

 Score = 56.6 bits (135), Expect = 4e-07
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
 Frame = +1

Query: 487 AFVAEEPEPEMERATPAIAKPAVDGL--TDDVVQKIT----KQVEYYFSDINLATTEHLV 648
           A   EE   E E A    A+   +    T + V K+     +Q+EYYF D NLA  + L 
Sbjct: 8   ATATEETTKEEEEAPETTAEQTEESAQETSENVSKLEASTIRQLEYYFGDANLARDKFLQ 67

Query: 649 RFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRTSSK-LVVSGDGKRVKRRHP 816
             ISKD +G+VP+ V+  FK++K+   +  ++  A+  S + L+   + +   RRHP
Sbjct: 68  EQISKD-EGWVPVDVLLTFKRLKSLSEDKKVIVDAIEKSDEGLIEVSEDREKLRRHP 123

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>P87058:LAH1_SCHPO La protein homolog - Schizosaccharomyces pombe (Fission yeast)|
          Length = 298

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 31/92 (33%), Positives = 48/92 (52%)
 Frame = +1

Query: 583 KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRT 762
           ++ KQVE+YFSD NL   + L     K+  G+VPI  IA FK+++ F     ++ A  ++
Sbjct: 66  EVLKQVEFYFSDTNLPHDKFLWTTSQKN-DGWVPIQTIANFKRMRRFQPLEAIVNALRKS 124

Query: 763 SSKLVVSGDGKRVKRRHPFTESDMQEFQSRIV 858
              L V   G++V+R  P    D +    R V
Sbjct: 125 PELLEVDEAGEKVRRMIPLVRVDNKSVMERSV 156

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>Q9VAW5:LARP_DROME La-related protein - Drosophila melanogaster (Fruit fly)|
          Length = 1403

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 26/69 (37%), Positives = 41/69 (59%)
 Frame = +1

Query: 568 DDVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLA 747
           + + + I KQVEYYFS  NL     L R    DP+GY+P+++IA F ++ A   +  ++ 
Sbjct: 457 NSIKEAIKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIV 514

Query: 748 AALRTSSKL 774
            A++ S KL
Sbjct: 515 NAIKESDKL 523

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>P05455:LA_HUMAN Lupus La protein - Homo sapiens (Human)|
          Length = 408

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
 Frame = +1

Query: 583 KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHN-NPMLAAALR 759
           KI  Q+EYYF D NL   + L   I  D +G+VP+ ++  F ++     + N ++ A  +
Sbjct: 16  KICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSK 74

Query: 760 TSSKLVVSGDGKRVKRRHP------FTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAV 921
           + ++L+   + K   RR P       T+    + ++R V  +  P D +  ++ +     
Sbjct: 75  SKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDK 134

Query: 922 GSVRTIR 942
           G V  I+
Sbjct: 135 GQVLNIQ 141

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>P10881:LA_BOVIN Lupus La protein homolog - Bos taurus (Bovine)|
          Length = 404

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
 Frame = +1

Query: 583 KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHN-NPMLAAALR 759
           KI  Q+EYYF D NL   + L   I  D +G+VP+ ++  F ++     + N ++ A  +
Sbjct: 16  KICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEALSK 74

Query: 760 TSSKLVVSGDGKRVKRRHP------FTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAV 921
           + ++L+   + K   RR P       T+    + ++R V  +  P D +  ++ +     
Sbjct: 75  SKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDAALDDIKEWLEDK 134

Query: 922 GSVRTIR 942
           G V  I+
Sbjct: 135 GQVLNIQ 141

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>P32067:LA_MOUSE Lupus La protein homolog - Mus musculus (Mouse)|
          Length = 415

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
 Frame = +1

Query: 583 KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHN-NPMLAAALR 759
           KI  Q+EYYF D NL   + L   I  D +G+VP+  +  F ++     + N ++ A  +
Sbjct: 16  KICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSK 74

Query: 760 TSSKLV-VSGDGKRVKRR-----HPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAV 921
           + +KL+ VS D  +++R         T+    + ++R V  +  P D +  ++ +     
Sbjct: 75  SKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDK 134

Query: 922 GSVRTIR 942
           G +  I+
Sbjct: 135 GQILNIQ 141

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>Q6PKG0:LARP1_HUMAN La-related protein 1 - Homo sapiens (Human)|
          Length = 1096

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 586 ITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRTS 765
           I +Q+EYYFS  NL     L R    D  G++PI++IA F +++A   +  ++ AAL+  
Sbjct: 407 IKRQIEYYFSVDNLERDFFLRR--KMDADGFLPITLIASFHRVQALTTDISLIFAALK-D 463

Query: 766 SKLVVSGDGKRVKRRHP 816
           SK+V   D K  +R  P
Sbjct: 464 SKVVEIVDEKVRRREEP 480

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>Q6ZQ58:LARP1_MOUSE La-related protein 1 - Mus musculus (Mouse)|
          Length = 1072

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
 Frame = +1

Query: 586 ITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRTS 765
           I +Q+EYYFS  NL     L R    D  G++PI++IA F +++A   +  ++ AAL+ S
Sbjct: 382 IKRQIEYYFSVDNLERDFFLRR--KMDADGFLPITLIASFHRVQALTTDISLIFAALKDS 439

Query: 766 SKLVVSGDGKRVKRRH----------PFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFS 915
              VV    ++V+RR           P  +    +F   +   E +P    YQ   +  S
Sbjct: 440 K--VVEMVEEKVRRREEPEKWPLPGPPIVDYSQTDFSQLLNCPEFVPRQ-HYQK--ETES 494

Query: 916 AVGSVRTI 939
           A GS R +
Sbjct: 495 APGSPRAV 502

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>P38656:LA_RAT Lupus La protein homolog - Rattus norvegicus (Rat)|
          Length = 415

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
 Frame = +1

Query: 583 KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKIKAFVHNNPMLAAALRT 762
           KI  Q+EYYF D NL   + L   I  D +G+VP+  +  F ++     +  ++  AL  
Sbjct: 16  KICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTTDFNVIVQALSK 74

Query: 763 S--SKLVVSGDGKRVKRR-----HPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAV 921
           S  + + VS D  +++R         T+    + ++R V  +  P D +  ++ +     
Sbjct: 75  SKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDK 134

Query: 922 GSVRTIR 942
           G +  I+
Sbjct: 135 GQILNIQ 141

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>P28049:LAB_XENLA Lupus La protein homolog B - Xenopus laevis (African clawed frog)|
          Length = 427

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
 Frame = +1

Query: 571  DVVQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKI-KAFVHNNPMLA 747
            D+  KI +Q+EYYF D NL   + L + +  D  G+VP+  +  F ++ K     N +L 
Sbjct: 11   DLDTKICEQIEYYFGDHNLPRDKFLKQQVLLD-NGWVPLETMIKFNRLSKLTTDFNIILQ 69

Query: 748  AALRTSSKLVVSGDGKRVKRRHP------FTESDMQEFQSRIVVAENLPGDPSYQNLMKI 909
            A  ++ ++L+   + K   RR P        E     F+ R V    + G P+  NL +I
Sbjct: 70   ALKKSKTELLEINEEKCKIRRSPAKPLPELNEDYKNSFKHRSVY---IKGFPTITNLDEI 126

Query: 910  FSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
                           +  N  GP  N   +  +    K   F+ + T + A+K + + N
Sbjct: 127  --------------KEWLNDKGPIENIQMRRTLQREFKGSVFLVFNTEDGAKKFLEDKN 171

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>P25567:SRO9_YEAST RNA-binding protein SRO9 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 434

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = +1

Query: 577 VQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKI--KAFVHNNPMLAA 750
           +  I +Q+EYYFS+ NL    +L   +SKD  G+ P+S+I+ F ++   +F  +  ++ A
Sbjct: 262 INNIARQIEYYFSEENLTVDNYLRSKLSKD--GFAPLSLISKFYRVVNMSFGGDTNLILA 319

Query: 751 ALR 759
           ALR
Sbjct: 320 ALR 322

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>P28048:LAA_XENLA Lupus La protein homolog A - Xenopus laevis (African clawed frog)|
          Length = 428

 Score = 39.7 bits (91), Expect = 0.046
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
 Frame = +1

Query: 583  KITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKI-KAFVHNNPMLAAALR 759
            KI +Q+EYYF D NL   + L + I  D  G+VP+  +  F ++ K     N +L A  +
Sbjct: 16   KICEQIEYYFGDHNLPRDKFLKQQILLD-DGWVPLETMIKFNRLSKLTTDFNTILQALKK 74

Query: 760  TSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENLPG-DPSYQNLMK---IFSAVGS 927
            + ++L+   + K   RR P               A+ LP  +  Y+N +K   ++     
Sbjct: 75   SKTELLEINEEKCKIRRSP---------------AKPLPELNDEYKNSLKHKSVYIKGFP 119

Query: 928  VRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
               I     +     GP  N   +  +    K   F+ + T +DA+K +   N
Sbjct: 120  TSAILDDVKEWLKDKGPIENIQMRRTLQREFKGSIFIIFNTDDDAKKFLENRN 172

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>Q12034:SLF1_YEAST Protein SLF1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 447

 Score = 38.9 bits (89), Expect = 0.078
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +1

Query: 577 VQKITKQVEYYFSDINLATTEHLVRFISKDPQGYVPISVIAGFKKI 714
           ++ I  Q+E+YFS+ NL T E L     K   G++P+S+I  F ++
Sbjct: 272 IESIKNQIEFYFSEENLKTDEFLRSKFKKANDGFIPMSLIGKFYRM 317

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>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus|
            neoformans (Filobasidiella neoformans)
          Length = 769

 Score = 37.4 bits (85), Expect = 0.23
 Identities = 25/96 (26%), Positives = 45/96 (46%)
 Frame = +1

Query: 844  QSRIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANK 1023
            +S  V+ +NLP + + +++ ++FSA G ++++R      P   G  + R           
Sbjct: 638  KSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRG---------- 687

Query: 1024 LHAFVEYETHEDAEKAILELNDERNWRNGLRLQLLN 1131
              AF+E+ TH +A +A+  L         L LQ  N
Sbjct: 688  -FAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWAN 722

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>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.51
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
 Frame = +1

Query: 718  AFVHNNPMLAA--------ALRTSSKLVVSGDGKRVKRRHPFTESDMQEFQSRIVVAENL 873
            AFVH     AA         +  + + V  G  K  K R     +  +EF +  V  +N 
Sbjct: 141  AFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN--VYIKNF 198

Query: 874  PGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETH 1053
              +   ++L ++FS  G   +++    + PNG                +K   FV YE H
Sbjct: 199  GEEVDDESLKELFSQFGKTLSVKVM--RDPNGK---------------SKGFGFVSYEKH 241

Query: 1054 EDAEKAILELN 1086
            EDA KA+ E+N
Sbjct: 242  EDANKAVEEMN 252

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>Q9NEW6:RSP3_CAEEL Probable splicing factor, arginine/serine-rich 3 - Caenorhabditis|
            elegans
          Length = 258

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 24/73 (32%), Positives = 31/73 (42%)
 Frame = +1

Query: 856  VVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAF 1035
            V   NLPGD   + +  IF   G ++     Y    +G GPA                AF
Sbjct: 11   VYVGNLPGDVREKEVEDIFHKYGRIK-----YVDIKSGRGPA---------------FAF 50

Query: 1036 VEYETHEDAEKAI 1074
            VE+E H DAE A+
Sbjct: 51   VEFEDHRDAEDAV 63

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>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)|
          Length = 614

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 21/94 (22%), Positives = 40/94 (42%)
 Frame = +1

Query: 805  RRHPFTESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPAT 984
            RR    E   +  +   +  +NLP D   Q L  +FS  G + +++     + +      
Sbjct: 176  RREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH------ 229

Query: 985  NRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
                       ++   FV +E HE+A+KA++ +N
Sbjct: 230  -----------SRCFGFVNFEKHEEAQKAVVHMN 252

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>O22315:SFRS1_ARATH Pre-mRNA-splicing factor SF2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 303

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 26/81 (32%), Positives = 32/81 (39%)
 Frame = +1

Query: 832  MQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDML 1011
            M    SR V   NLPGD   + +  +FS  G V  I    P  P G              
Sbjct: 1    MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPG-------------- 46

Query: 1012 FANKLHAFVEYETHEDAEKAI 1074
                 +AFVE++   DAE AI
Sbjct: 47   -----YAFVEFDDARDAEDAI 62

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>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis (Western|
            clawed frog) (Silurana tropicalis)
          Length = 629

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
 Frame = +1

Query: 721  FVHNNPMLAA--ALRTSSKLVVSGD----GKRVKRRHPFTESDMQEFQSRIVVAENLPGD 882
            FVH     AA  A++T + ++++      G    RR    E   +  +   V  +N   D
Sbjct: 142  FVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGED 201

Query: 883  PSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDA 1062
               + L +IFSA G+  +++     T    G                   FV Y  HE+A
Sbjct: 202  MDDKRLREIFSAFGNTLSVKVMMDDTGRSRG-----------------FGFVNYGNHEEA 244

Query: 1063 EKAILELN 1086
            +KA+ E+N
Sbjct: 245  QKAVSEMN 252

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>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus|
            musculus (Mouse)
          Length = 632

 Score = 33.5 bits (75), Expect = 3.3
 Identities = 26/90 (28%), Positives = 36/90 (40%)
 Frame = +1

Query: 850  RIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLH 1029
            R V   N+P + + + L  IFS VGSV + R  Y +    P                K +
Sbjct: 16   RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKP----------------KGY 59

Query: 1030 AFVEYETHEDAEKAILELNDERNWRNGLRL 1119
             F EY+  E A  A+  LN        LR+
Sbjct: 60   GFCEYQDQETALSAMRNLNGREFSGRALRV 89

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>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo|
            sapiens (Human)
          Length = 616

 Score = 33.5 bits (75), Expect = 3.3
 Identities = 26/90 (28%), Positives = 36/90 (40%)
 Frame = +1

Query: 850  RIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLH 1029
            R V   N+P + + + L  IFS VGSV + R  Y +    P                K +
Sbjct: 16   RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKP----------------KGY 59

Query: 1030 AFVEYETHEDAEKAILELNDERNWRNGLRL 1119
             F EY+  E A  A+  LN        LR+
Sbjct: 60   GFCEYQDQETALSAMRNLNGREFSGRALRV 89

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>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -|
            Saccharomyces cerevisiae (Baker's yeast)
          Length = 577

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +1

Query: 820  TESDMQEFQSRIVVAENLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAK 999
            +ES   E  S  +   +L    S  +L  IFS +GSV +IR C                 
Sbjct: 28   SESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC----------------- 70

Query: 1000 LDMLFANKL-HAFVEYETHEDAEKAILELN 1086
             D +    L +A+V +  HE   KAI +LN
Sbjct: 71   RDAITKTSLGYAYVNFNDHEAGRKAIEQLN 100



 Score = 33.1 bits (74), Expect = 4.3
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELND 1089
            GP  + S + D     K   FV YE HEDA KA+  LND
Sbjct: 243  GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALND 281

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>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)|
          Length = 631

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)|
          Length = 636

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 636

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)|
          Length = 636

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)|
          Length = 636

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)|
          Length = 636

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252

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>Q19706:IF34_CAEEL Probable eukaryotic translation initiation factor 3 subunit 4 -|
            Caenorhabditis elegans
          Length = 256

 Score = 32.7 bits (73), Expect = 5.6
 Identities = 24/85 (28%), Positives = 37/85 (43%)
 Frame = +1

Query: 868  NLPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYE 1047
            NLP + +   L  +F  +G V  I     +    P                K  AFV +E
Sbjct: 182  NLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLP----------------KGFAFVTFE 225

Query: 1048 THEDAEKAILELNDERNWRNGLRLQ 1122
            + +DA +AI ELND R +   L+++
Sbjct: 226  SRDDAARAIAELNDIRMYHMVLKVE 250

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>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African|
            clawed frog)
          Length = 629

 Score = 32.7 bits (73), Expect = 5.6
 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
 Frame = +1

Query: 721  FVHNNPMLAA--ALRTSSKLVVSGD----GKRVKRRHPFTESDMQEFQSRIVVAENLPGD 882
            FVH     AA  A++T + ++++      G    RR    E   +  +   V  +N   D
Sbjct: 142  FVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGED 201

Query: 883  PSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYETHEDA 1062
               + L +IFSA G+  +++     +    G                   FV Y  HE+A
Sbjct: 202  MDDKRLKEIFSAFGNTLSVKVMMDNSGRSRG-----------------FGFVNYGNHEEA 244

Query: 1063 EKAILELN 1086
            +KA+ E+N
Sbjct: 245  QKAVTEMN 252

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>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo|
            pygmaeus (Orangutan)
          Length = 981

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 26/99 (26%), Positives = 45/99 (45%)
 Frame = +1

Query: 871  LPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYET 1050
            LP   + + L +I  A G+V+ +R             TNR+ K   L      A+VEYE 
Sbjct: 826  LPFSCTKEELEEICKAHGTVKDLRL-----------VTNRAGKPKGL------AYVEYEN 868

Query: 1051 HEDAEKAILELNDERNWRNGLRLQLLNTCMTKCPVKGKT 1167
               A +A+++++      N +++ + N    K P K +T
Sbjct: 869  ESQASQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPET 907

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>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed|
            frog)
          Length = 633

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GPA +     D    +K   FV +E HEDA+KA+ E+N
Sbjct: 215  GPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252

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>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)|
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)|
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)|
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)|
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)|
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland|
            gorilla)
          Length = 382

 Score = 32.3 bits (72), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 973  GPATNRSAKLDMLFANKLHAFVEYETHEDAEKAILELN 1086
            GP  +     D    +K   FV YETHE A+KA+L+L+
Sbjct: 223  GPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

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>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo|
            sapiens (Human)
          Length = 963

 Score = 32.0 bits (71), Expect = 9.5
 Identities = 26/99 (26%), Positives = 45/99 (45%)
 Frame = +1

Query: 871  LPGDPSYQNLMKIFSAVGSVRTIRTCYPQTPNGPGPATNRSAKLDMLFANKLHAFVEYET 1050
            LP   + + L +I  A G+V+ +R             TNR+ K   L      A+VEYE 
Sbjct: 808  LPFSCTKEELEEICKAHGTVKDLRL-----------VTNRAGKPKGL------AYVEYEN 850

Query: 1051 HEDAEKAILELNDERNWRNGLRLQLLNTCMTKCPVKGKT 1167
               A +A+++++      N +++ + N    K P K +T
Sbjct: 851  ESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPET 889


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 299,201,658
Number of extensions: 6014959
Number of successful extensions: 17220
Number of sequences better than 10.0: 49
Number of HSP's gapped: 17177
Number of HSP's successfully gapped: 50
Length of query: 648
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 528
Effective length of database: 67,771,039
Effective search space: 35783108592
Effective search space used: 35783108592
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result