ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58b24 |
|---|---|
| Clone Library Name | barley_pub |
>P62598:ARR12_ARATH Two-component response regulator ARR12 - Arabidopsis thaliana| (Mouse-ear cress) Length = 596 Score = 239 bits (611), Expect = 3e-62 Identities = 129/225 (57%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FPVGMRVLAVDDD TCLK+LE+LLR C YHVTTT QA AL +LRENK++FDLVISDV M Sbjct: 13 FPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDM 72 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 PDMDGFKLLELVGLEMDLPVIMLSA+ + + VMKG+THGACDYLLKPVR+E+LK IWQHV Sbjct: 73 PDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV 132 Query: 704 IR-RNTKNRGSDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXX 880 +R R KNRGS+N+ + Sbjct: 133 VRSRFDKNRGSNNNGDKR---DGSGNEGVGNSDPNNGKGNRKRKDQYNEDEDEDRDDNDD 189 Query: 881 XXXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINVRYL 1015 QKK RVVW+VELH+KFVAAVNQLG + ++ ++NV L Sbjct: 190 SCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKL 234 Score = 91.3 bits (225), Expect = 2e-17 Identities = 106/409 (25%), Positives = 163/409 (39%), Gaps = 20/409 (4%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMN 1248 +A+PKKILDLMNVE +TRENVASHLQK+RLYLKR+S A++Q A + + MN Sbjct: 219 KAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQ----AIMANSELHFMQMN 274 Query: 1249 SMDVFRHYNNAYGR---YRPVPTSTHSQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHA 1419 +D F H G + P N ++ R+NS S G+ L SP P + Sbjct: 275 GLDGFHHRPIPVGSGQYHGGAPAMRSFPPNGILGRLNSSSGIGVRSLSSP---PAGMFLQ 331 Query: 1420 QNNNLGT--SLNDLGVNN---GNLIRTAHMSTMV--TGTSGNTFANISNGAQLAPTNRAV 1578 ++G ++ L +N+ GN+++ M T+ N N+++ +A T+ A Sbjct: 332 NQTDIGKFHHVSSLPLNHSDGGNILQGLPMPLEFDQLQTNNNKSRNMNSNKSIAGTSMAF 391 Query: 1579 QPLESSNRQHLGRINXXXXXXXXXXXXXXPHFP--DLGRSSNTWQTAVPSNIQQLGQNGS 1752 + + N P FP + + W AV S+ Sbjct: 392 PSFSTQQNSLISAPNNNVVVLEGHPQATPPGFPGHQINKRLEHWSNAVSSSTHP------ 445 Query: 1753 MSQASFHGNGPRMEPVSSYAPPSNQITSLGNEMQNQVAPLA-SNTLPMVFNQGAAPFTFG 1929 PP++ S+ + Q V+PL S P+ +N ++ + Sbjct: 446 -------------------PPPAHNSNSINH--QFDVSPLPHSRPDPLEWNNVSSSY--- 481 Query: 1930 NSTNSREAHNSNLAFSNSGINTSLPNLRIDN-SIMPRQTLDGGNTGGVPSLQDG-KIDQQ 2103 ++ F +S S P L N R T NT P + G D Sbjct: 482 -----------SIPFCDSANTLSSPALDTTNPRAFCRNTDFDSNTNVQPGVFYGPSTDAM 530 Query: 2104 AVGNQLNYSNNDLVGTSGLQR-----ELSGGLDDIVVDMFRPDNDTGGI 2235 A+ + N +VG LQ +G LDDIV + + G + Sbjct: 531 ALLSSSNPKEGFVVGQQKLQSGGFMVADAGSLDDIVNSTMKQEQSQGDL 579
>O49397:ARR10_ARATH Two-component response regulator ARR10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 552 Score = 224 bits (572), Expect = 1e-57 Identities = 116/221 (52%), Positives = 144/221 (65%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FPVGMRVLAVDDD TCL++L+ LL+RC YHVTTT QA TAL +LRENK++FDLVISDV M Sbjct: 13 FPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDM 72 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 PDMDGFKLLELVGLEMDLPVIMLSA+ + + VMKG+ HGACDYLLKPVR+E+LK IWQHV Sbjct: 73 PDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132 Query: 704 IRRNTKNRGSDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXX 883 +R++ + N + Sbjct: 133 VRKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEE--------------EEERGNDNDDP 178 Query: 884 XXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINV 1006 QKKPRV+W+ ELH KF+AAV+ LG++ ++ ++NV Sbjct: 179 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNV 219 Score = 87.4 bits (215), Expect = 3e-16 Identities = 108/400 (27%), Positives = 156/400 (39%), Gaps = 22/400 (5%) Frame = +1 Query: 1015 VFWVHYVVCNNIFL----FINTE-AVPKKILDLMNVENITRENVASHLQKYRLYLKRMSM 1179 V W H + +N FL + E AVPKKILDLMNV+ +TRENVASHLQK+R+ LK++S Sbjct: 186 VLWTHEL--HNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSD 243 Query: 1180 DASRQANLVAALGGRNPAYSNMNSMDVFRHYNNAYGRYRPVPTST-----------HSQS 1326 DA +QAN A + + MNS + Y +R +P + H S Sbjct: 244 DAIQQANRAAI----DSHFMQMNSQ---KGLGGFYHHHRGIPVGSGQFHGGTTMMRHYSS 296 Query: 1327 NNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQNNNL--GTSLNDLGVNNGNLIRTAHMST 1500 N + R+NS A G+ P S H N+ G L +L +NN I A S Sbjct: 297 NRNLGRLNSLGA----GMFQPVSSSFPRNHNDGGNILQGLPLEELQINNN--INRAFPS- 349 Query: 1501 MVTGTSGNTFANISNGAQLAPTNRAVQPLESSNRQHLGRINXXXXXXXXXXXXXXPHFPD 1680 F + N +AP+N L N Q + H+ + Sbjct: 350 ---------FTSQQNSPMVAPSNLL---LLEGNPQSSSLPSNPGFSPHFEISKRLEHWSN 397 Query: 1681 LGRSSNTWQTAVPSNIQQLGQNGSMSQASFHGNGPRMEPVSSYAPPSNQITSLGNEMQNQ 1860 S+N Q+ V S L N AS P + P + Sbjct: 398 AALSTNIPQSDVHSKPDTLEWNAFCDSAS-----PLVNP----------------NLDTN 436 Query: 1861 VAPLASNTLPMVFNQGAAPFTFGNSTNSREAHNSNLAFSNSGINTSLPNLRIDNSIMPRQ 2040 A L NT N F + N + A+NS +S PN + +M +Q Sbjct: 437 PASLCRNTGFGSTNAAQTDFFYPLQMNQQPANNSGPVTEAQLFRSSNPN---EGLLMGQQ 493 Query: 2041 TLDGG----NTGGVPSLQDGKIDQQAVGNQLNYSNNDLVG 2148 L G + G + + + + Q+ + + + DL G Sbjct: 494 KLQSGLMASDAGSLDDIVNSLMTQEQSQSDFSEGDWDLDG 533
>Q9ZWJ9:ARR2_ARATH Two-component response regulator ARR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 664 Score = 202 bits (514), Expect = 6e-51 Identities = 110/234 (47%), Positives = 138/234 (58%), Gaps = 13/234 (5%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FP +RVL VDDDPTCL +LE +L C Y VT +A +AL +LR+NK+ FD+VISDVHM Sbjct: 24 FPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHM 83 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 PDMDGFKLLE VGLEMDLPVIM+SA+ V+KG+THGA DYL+KPVR+E LK IWQHV Sbjct: 84 PDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143 Query: 704 IRR-------------NTKNRGSDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXX 844 +R+ + ++ G D D Q + Sbjct: 144 VRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDD 203 Query: 845 XXXXXXXXXXXXXXXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINV 1006 KKPRVVWSVELH++FVAAVNQLG+D ++ ++NV Sbjct: 204 QGDDKEDSSSL-----KKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNV 252 Score = 65.1 bits (157), Expect = 1e-09 Identities = 31/66 (46%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANL-VAALGGRNPAYSNM 1245 +AVPKKIL++MNV +TRENVASHLQKYR+YL+R+ + Q N+ + + G++ ++ + Sbjct: 240 KAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPL 299 Query: 1246 NSMDVF 1263 +S++ F Sbjct: 300 SSLNGF 305
>Q9FGT7:ARR18_ARATH Two-component response regulator ARR18 - Arabidopsis thaliana| (Mouse-ear cress) Length = 635 Score = 201 bits (510), Expect = 2e-50 Identities = 111/229 (48%), Positives = 140/229 (61%), Gaps = 5/229 (2%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FPVGMRVLAVDD+PTCL+ LE LL RC YHVT T ++ AL MLREN + FDLVISDV M Sbjct: 14 FPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEM 73 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 PD DGFKLLE +GLEMDLPVIMLSA+ + +VMKGI HGACDYL+KPV L++L+ IW HV Sbjct: 74 PDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHV 132 Query: 704 IRRNTKNRG-----SDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXX 868 +++N K+ S++D Sbjct: 133 VKKNIKSYAKLLPPSESDSVPS--------ASRKRKDKVNDSGDEDDSDREEDDGEGSEQ 184 Query: 869 XXXXXXXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINVRYL 1015 +KKPRVVWS ELH+KFV+AV QLG+D ++ ++++ L Sbjct: 185 DGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGL 233 Score = 80.1 bits (196), Expect = 4e-14 Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 3/139 (2%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVA-ALGGRNPAYSNM 1245 +AVPKKILDLM++E +TRENVASHLQKYRLYLK+ +D +Q N+ A G R+ +Y M Sbjct: 218 KAVPKKILDLMSIEGLTRENVASHLQKYRLYLKK--IDEGQQQNMTPDAFGTRDSSYFQM 275 Query: 1246 NSMDVFRHYNNAYGRYRPVPTSTHSQSNNLVARMNSP--SAYGMHGLLSPQSQPLHLGHA 1419 +D R + A R +P+S ++L ++ P S+ + G+ S S + GH Sbjct: 276 AQLDGLRDFTAA----RQIPSSGLLSRSHL-TKLQPPMYSSINLQGMNS--SSFIQQGHH 328 Query: 1420 QNNNLGTSLNDLGVNNGNL 1476 QN++ S N G + L Sbjct: 329 QNSS--NSANPFGTYHSTL 345
>Q8L9Y3:ARR14_ARATH Two-component response regulator ARR14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 382 Score = 187 bits (476), Expect = 1e-46 Identities = 103/230 (44%), Positives = 131/230 (56%), Gaps = 9/230 (3%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FP G+R+L VDDD +CL +LE +L R Y VT QA AL +LRE KD FDLV+SDVHM Sbjct: 7 FPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHM 66 Query: 524 PDMDGFKLLELVG-LEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQH 700 P M+G+ LL+ VG LEMDLPVIM+S +G T TVM GI HGACDYL+KP+R E+LK IWQH Sbjct: 67 PGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126 Query: 701 VIRR--------NTKNRGSDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXX 856 V+RR + DN ++ + Sbjct: 127 VVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDD 186 Query: 857 XXXXXXXXXXXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINV 1006 KK RVVWS+ELH++FV AVN+LGID ++ ++NV Sbjct: 187 NEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNV 236 Score = 68.6 bits (166), Expect = 1e-10 Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 20/148 (13%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDAS---------RQANLVAAL-- 1215 +AVPK+IL+LMNV ++RENVASHLQK+RLYLKR+S +AS R N+ A + Sbjct: 224 KAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSS 283 Query: 1216 GGRNP-AYSNMNSMDVFRHYNNAYGRYRPVPTSTHSQ----SNNLVARMNSPSAYGMHGL 1380 G +P + + + H++ ++G + P SQ S ++ + N P + +HG Sbjct: 284 GQLHPQTLAALFGQPIDNHHSASFGVWIPNDNLGRSQNEHFSVDVSSASNRPVSVAVHG- 342 Query: 1381 LSPQSQPLHLGHAQNNNL----GTSLND 1452 LS + G NN + G+++N+ Sbjct: 343 LSSSANFRQRGDVNNNRIRQGYGSNVNE 370
>Q9FXD6:ARR11_ARATH Two-component response regulator ARR11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 521 Score = 187 bits (475), Expect = 2e-46 Identities = 86/122 (70%), Positives = 105/122 (86%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP 526 PVG+RVL VDDDPT LK+LE +L++C Y VTT G A ALR+LRE KD +D+VISDV+MP Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67 Query: 527 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 DMDGFKLLE VGLE+DLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LK IWQHV+ Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127 Query: 707 RR 712 R+ Sbjct: 128 RK 129 Score = 59.7 bits (143), Expect = 6e-08 Identities = 42/99 (42%), Positives = 55/99 (55%) Frame = +1 Query: 982 SCHCYHKCEIFVFWVHYVVCNNIFLFINTEAVPKKILDLMNVENITRENVASHLQKYRLY 1161 S +HK FV V+ + C++ +A PKKILDLMNV +TRENVASHLQKYRLY Sbjct: 199 SFELHHK---FVNAVNQIGCDH-------KAGPKKILDLMNVPWLTRENVASHLQKYRLY 248 Query: 1162 LKRMSMDASRQANLVAALGGRNPAYSNMNSMDVFRHYNN 1278 L R+ + L GG A S+ ++V Y + Sbjct: 249 LSRL----EKGKELKCYSGGVKNADSSPKDVEVNSGYQS 283 Score = 45.1 bits (105), Expect = 0.001 Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Frame = +2 Query: 893 KKPRVVWSVELHRKFVAAVNQLGIDSK-NSLHVIVIINVRYL 1015 KK RVVWS ELH KFV AVNQ+G D K ++ ++NV +L Sbjct: 192 KKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWL 233
>Q940D0:ARR1_ARATH Two-component response regulator ARR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 690 Score = 178 bits (451), Expect = 1e-43 Identities = 84/123 (68%), Positives = 99/123 (80%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FP G+RVL VDDDPTCL +LE +LR C Y VT +A AL +LR+NK FD+VISDVHM Sbjct: 33 FPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHM 92 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 PDMDGFKLLE VGLEMDLPVIM+SA+ V+KG+THGA DYL+KPVR+E LK IWQHV Sbjct: 93 PDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152 Query: 704 IRR 712 +R+ Sbjct: 153 VRK 155 Score = 65.5 bits (158), Expect = 1e-09 Identities = 32/66 (48%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANL-VAALGGRNPAYSNM 1245 +AVPKKIL+LMNV +TRENVASHLQKYR+YL+R+ + Q NL + + G++ ++ + Sbjct: 261 KAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPL 320 Query: 1246 NSMDVF 1263 ++++ F Sbjct: 321 STLNGF 326 Score = 52.4 bits (124), Expect = 9e-06 Identities = 23/38 (60%), Positives = 31/38 (81%) Frame = +2 Query: 893 KKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINV 1006 KKPRVVWSVELH++FVAAVNQLG++ ++ ++NV Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNV 273
>Q9LZJ8:ARR20_ARATH Putative two-component response regulator ARR20 - Arabidopsis| thaliana (Mouse-ear cress) Length = 426 Score = 110 bits (276), Expect(2) = 2e-29 Identities = 66/201 (32%), Positives = 94/201 (46%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 RVL V D L+NL+ + Y VT A+ L +NK + DLVI D HMPD++G Sbjct: 42 RVLLVGADSN--SSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L ++G +MDLPV+++S + +TVM+ I +GACD+L+KPV E + +W+HV R+ Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159 Query: 719 KNRGSDNDDASQXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXXXXQKK 898 G D S KK Sbjct: 160 SKSGLDKPGES--------GTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPTKK 211 Query: 899 PRVVWSVELHRKFVAAVNQLG 961 PR+ W+ ELH KF AV ++G Sbjct: 212 PRMQWTPELHHKFEVAVEKMG 232 Score = 40.8 bits (94), Expect(2) = 2e-29 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 17/116 (14%) Frame = +1 Query: 1069 EAVPKKILDLM----NVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAY 1236 +A PK IL M NV+ +TR NVASHLQKYR K+ Q + V G + Sbjct: 236 KAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFVWGNAGPDVTL 295 Query: 1237 SNMNSMDVFRHYNNAY---------GRY----RPVPTSTHSQSNNLVARMNSPSAY 1365 + ++ + H +Y G Y P P+++ NN M +PS Y Sbjct: 296 AASKTL-LSSHATPSYLINNQAAPRGSYFMNNIPYPSTSCLPVNNNNCFMTNPSTY 350
>Q9FJ16:APRR4_ARATH Putative two-component response regulator-like APRR4 - Arabidopsis| thaliana (Mouse-ear cress) Length = 292 Score = 115 bits (288), Expect = 9e-25 Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 1/225 (0%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FP G+RVL D+DP+ L +LE L++ Y VT + A+ LR ++++FDL + V+ Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 + D F+ L +G EMDLP+I++S + ++V K + +GA DYL+KP+R E L+ +++H+ Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157 Query: 704 IRRNTKNRGSDNDDASQ-XXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXX 880 +++ + R +A + + Sbjct: 158 VKKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRAC 217 Query: 881 XXXQKKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINVRYL 1015 KK RVVW ELH+ F+ AV+ LG++ ++ ++ V Y+ Sbjct: 218 ASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYI 262 Score = 42.7 bits (99), Expect = 0.007 Identities = 20/25 (80%), Positives = 23/25 (92%) Frame = +1 Query: 1072 AVPKKILDLMNVENITRENVASHLQ 1146 AVPKKILD+M V+ I+RENVASHLQ Sbjct: 248 AVPKKILDVMKVDYISRENVASHLQ 272
>Q9M9B9:ARR19_ARATH Putative two-component response regulator ARR19 - Arabidopsis| thaliana (Mouse-ear cress) Length = 407 Score = 101 bits (252), Expect = 1e-20 Identities = 47/123 (38%), Positives = 79/123 (64%) Frame = +2 Query: 344 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 523 FP VL VD + T L ++ ++++ Y V+ A AL L K + ++VI D HM Sbjct: 30 FPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHM 89 Query: 524 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 P +DG + L+ + ++DLPV+++S + +T++VMK +GACDY++KPV+ E + IWQH+ Sbjct: 90 PGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHI 149 Query: 704 IRR 712 +R+ Sbjct: 150 VRK 152 Score = 38.5 bits (88), Expect(2) = 1e-05 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Frame = +1 Query: 1069 EAVPKKILDL---MNVENITRENVASHLQKYRLYLKRMSMDASRQAN 1200 +A PK +++ M +E ITR NVASHLQK+R+ L+ + Q N Sbjct: 240 KANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEENQIPQQTQGN 286 Score = 33.1 bits (74), Expect(2) = 1e-05 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +2 Query: 893 KKPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIV 994 +KPR+ W+ ELH+KF+ A+ +G K + V+V Sbjct: 214 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLV 247
>Q6LA42:APRR5_ARATH Two-component response regulator-like APRR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 558 Score = 95.5 bits (236), Expect = 1e-18 Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 4/127 (3%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + +RVL V+ D + +++ LLR+C Y V A ML+ + DL++++V +P Sbjct: 48 IALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 107 Query: 530 MDGFKLLELVGLEMDL----PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQ 697 + G+ LL L+ +E D+ PVIM+S TV K + GA DYL+KP+R +L+ +WQ Sbjct: 108 ISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 166 Query: 698 HVIRRNT 718 HV RR T Sbjct: 167 HVWRRQT 173
>Q689G4:PRR73_ORYSA Two-component response regulator-like PRR73 - Oryza sativa (Rice)| Length = 767 Score = 94.0 bits (232), Expect = 3e-18 Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 3/132 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +RVL V++D + +V+ LLR+C Y V A + L + ++ DLV+++V MP + Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140 Query: 536 GFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 G LL + D+PVIM+S+N TV K ++ GA D+L+KP+R +LK +WQHV Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200 Query: 707 RRNTKNRGSDND 742 RR + GS ++ Sbjct: 201 RRCHSSSGSGSE 212
>Q8L500:APRR9_ARATH Two-component response regulator-like APRR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 468 Score = 93.6 bits (231), Expect = 4e-18 Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 3/124 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +RVL V+ D + +++ LLR+C Y V A +L+E DL+++++ +P + Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96 Query: 536 GFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 GF LL LV ++PVIM+S+ + V+K + GA DYL+KP+R +LK +WQHV Sbjct: 97 GFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVW 156 Query: 707 RRNT 718 RR T Sbjct: 157 RRLT 160
>Q689G8:PRR37_ORYSA Two-component response regulator-like PRR37 - Oryza sativa (Rice)| Length = 742 Score = 93.2 bits (230), Expect = 5e-18 Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 3/136 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 ++VL VD D + +V+ LLR C Y V A L + ++ DLV+++V MP + Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121 Query: 536 GFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 G LL + + ++PVIM+S+N TV K ++ GA D+L+KP+R +LK +WQHV Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181 Query: 707 RRNTKNRGSDNDDASQ 754 RR + GS ++ Q Sbjct: 182 RRCHSSSGSGSESGIQ 197
>Q9LVG4:APRR3_ARATH Two-component response regulator-like APRR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 89.4 bits (220), Expect = 7e-17 Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 ++VL V++D + ++ LL+ C Y VT A R+L + K DLV+++V MP Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123 Query: 536 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 G LL + L PVIM+S++ V K +++GA D+L+KP+R +LK +WQHV Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183 Query: 707 RRNTKNRGSDND 742 RR + GS ++ Sbjct: 184 RRCHSSSGSGSE 195
>Q689G6:PRR95_ORYSJ Two-component response regulator-like PRR95 - Oryza sativa subsp.| japonica (Rice) Length = 623 Score = 87.8 bits (216), Expect = 2e-16 Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 4/123 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +RVL + D + ++ LLR+C Y V A +L+E DLV+++V +P M Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102 Query: 536 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 GF LL + +E D +PVIM+S+N V K + GA D+L+KP+R +L+ +WQHV Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161 Query: 704 IRR 712 R+ Sbjct: 162 WRK 164
>Q93WK5:APRR7_ARATH Two-component response regulator-like APRR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 727 Score = 85.1 bits (209), Expect = 1e-15 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +RVL V++D ++ LLR C Y V A ++L + + D+V+++V MP + Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137 Query: 536 GFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 G LL + ++PVIM+S++ V K ++ GA D+L+KP+R +LK +WQHV Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197 Query: 707 RRNTKNRGSDNDDAS 751 RR + GS ++ + Sbjct: 198 RRCQSSSGSGSESGT 212
>Q9LKL2:APRR1_ARATH Two-component response regulator-like APRR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 618 Score = 81.6 bits (200), Expect = 1e-14 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 3/122 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +R+L D+D T L + LL C Y VT A + L D++++++ +P Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78 Query: 536 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 G K+L + + DL PVIM+S E V+K + GA DYL+KP+R +L +W H+ Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138 Query: 707 RR 712 RR Sbjct: 139 RR 140
>Q689G9:PRR1_ORYSJ Two-component response regulator-like PRR1 - Oryza sativa subsp.| japonica (Rice) Length = 518 Score = 79.3 bits (194), Expect = 7e-14 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 9/137 (6%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +R+L D DP+ + + LL C Y VT + +L + D+++++V +P Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87 Query: 536 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 FK+L+ + +L P+IM+S E V+K + GA +YL+KP+R+ +L +W HV Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147 Query: 707 RR------NTKNRGSDN 739 RR + KN +DN Sbjct: 148 RRRRMLGLSEKNFFNDN 164
>O78428:YCF27_GUITH Probable transcriptional regulator ycf27 - Guillardia theta| (Cryptomonas phi) Length = 254 Score = 75.5 bits (184), Expect = 1e-12 Identities = 41/121 (33%), Positives = 68/121 (56%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 +VL VDD+ + K+LE L Y V T AL + + D+VI D+ MP +DG Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMP--DVVILDIMMPKLDG 73 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + + D+P+IML+A G+ + G+ GA DY++KP ++L+ + V+RR Sbjct: 74 YGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRRTN 133 Query: 719 K 721 K Sbjct: 134 K 134
>Q04803:PFER_PSEAE Transcriptional activator protein pfeR - Pseudomonas aeruginosa| Length = 305 Score = 75.5 bits (184), Expect = 1e-12 Identities = 44/118 (37%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+DDP + L+ RR + VT G + L ++ FDLV+ D+ +P +DG Sbjct: 79 RLLLVEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAA--GREAFDLVLLDIMLPGLDG 136 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 LLE + E PV+++SA G Q + G T GA DYL KP L +L ++RR Sbjct: 137 LALLESLRREQATPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARTDALLRR 194
>Q1XDC9:YCF27_PORYE Probable transcriptional regulator ycf27 - Porphyra yezoensis| Length = 243 Score = 73.9 bits (180), Expect = 3e-12 Identities = 43/121 (35%), Positives = 69/121 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ + ++LE L Y V T AL + R K+ LV+ DV MP +DG Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFR--KEYPSLVVLDVMMPKLDG 64 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + E D+P+IML+A GE + G+ GA DY++KP ++L+ + V+RR Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRRAD 124 Query: 719 K 721 K Sbjct: 125 K 125
>P51358:YCF27_PORPU Probable transcriptional regulator ycf27 - Porphyra purpurea| Length = 243 Score = 73.6 bits (179), Expect = 4e-12 Identities = 43/121 (35%), Positives = 69/121 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ + ++LE L Y V T AL + R K+ LV+ DV MP +DG Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDG 64 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + E D+P+IML+A GE + G+ GA DY++KP ++L+ + V+RR Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRRAD 124 Query: 719 K 721 K Sbjct: 125 K 125
>P10576:NTRC_BRASR Nitrogen assimilation regulatory protein - Bradyrhizobium sp.| (strain RP501 Parasponia) Length = 480 Score = 73.2 bits (178), Expect = 5e-12 Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L DDD VL L R Y V TG AAT R + + + DLVI+DV MPD + F Sbjct: 6 ILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEG--DLVITDVVMPDENAF 63 Query: 542 KLLELVG-LEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 LL + + +LPVI++SA T ++ GA +YL KP L++L TI + Sbjct: 64 DLLPRIKKMRPNLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKELITIVGRALAEPK 123 Query: 719 KNRGSDNDD 745 + S DD Sbjct: 124 ERVSSPADD 132
>P0A5Z6:PRRA_MYCTU Transcriptional regulatory protein prrA - Mycobacterium| tuberculosis Length = 233 Score = 72.8 bits (177), Expect = 7e-12 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 RVL VDDD L LE LR + V T A ALR EN+ D ++ D++MP +DG Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRP--DAIVLDINMPVLDG 66 Query: 539 FKLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 ++ L ++ D+PV +LSA + G+ GA DYL+KP L +L + ++RR Sbjct: 67 VSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR- 125 Query: 716 TKNRGSDNDDASQ 754 RGS +S+ Sbjct: 126 ---RGSTATSSSE 135
>P0A5Z7:PRRA_MYCBO Transcriptional regulatory protein prrA - Mycobacterium bovis| Length = 233 Score = 72.8 bits (177), Expect = 7e-12 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 RVL VDDD L LE LR + V T A ALR EN+ D ++ D++MP +DG Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRP--DAIVLDINMPVLDG 66 Query: 539 FKLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 ++ L ++ D+PV +LSA + G+ GA DYL+KP L +L + ++RR Sbjct: 67 VSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR- 125 Query: 716 TKNRGSDNDDASQ 754 RGS +S+ Sbjct: 126 ---RGSTATSSSE 135
>P25852:ZRAR_SALTY Transcriptional regulatory protein zraR - Salmonella typhimurium| Length = 441 Score = 72.0 bits (175), Expect = 1e-11 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD + +L+ LLR Y+V AL +RE FDLV+ DV M +MDG Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKV--FDLVLCDVRMAEMDGI 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L E+ L +P+++++A +T ++ + GA DYL+KP+ ++L+ + + +T Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL-AHT 124 Query: 719 KNRGSDNDDAS 751 + G++ AS Sbjct: 125 RETGAELPSAS 135
>Q8Z333:ZRAR_SALTI Transcriptional regulatory protein zraR - Salmonella typhi| Length = 441 Score = 72.0 bits (175), Expect = 1e-11 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD + +L+ LLR Y+V AL +RE FDLV+ DV M +MDG Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKV--FDLVLCDVRMAEMDGI 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L E+ L +P+++++A +T ++ + GA DYL+KP+ ++L+ + + +T Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKAL-AHT 124 Query: 719 KNRGSDNDDAS 751 + G++ AS Sbjct: 125 RETGAELPSAS 135
>P14375:ZRAR_ECOLI Transcriptional regulatory protein zraR - Escherichia coli| Length = 441 Score = 71.6 bits (174), Expect = 1e-11 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD + +L+ LLR Y+V AL +RE FDLV+ DV M +MDG Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQV--FDLVLCDVRMAEMDGI 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 L E+ L +PV++++A +T ++ + GA DYL+KP+ + L+ Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>Q8X613:ZRAR_ECO57 Transcriptional regulatory protein zraR - Escherichia coli O157:H7| Length = 441 Score = 71.6 bits (174), Expect = 1e-11 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD + +L+ LLR Y+V AL +RE FDLV+ DV M +MDG Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERV--FDLVLCDVRMAEMDGI 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 L E+ L +PV++++A +T ++ + GA DYL+KP+ + L+ Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>P45671:NTRC_AZOBR Nitrogen assimilation regulatory protein - Azospirillum brasilense| Length = 481 Score = 71.6 bits (174), Expect = 1e-11 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L DDD VL L R + V TTG A+T R + + Q DL+I+DV MPD +G Sbjct: 6 ILVADDDRAIRTVLTQALARLGHEVRTTGNASTLWRWVADG--QGDLIITDVVMPDENGL 63 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L+ + + DL +I++SA T +K GA +YL KP L++L ++ + + NT Sbjct: 64 DLIPRIKKIRPDLRIIVMSAQNTLITAVKAAERGAFEYLPKPFDLKELVSVVERALNSNT 123
>P33112:SPAR_BACSU Subtilin biosynthesis regulatory protein spaR - Bacillus subtilis| Length = 220 Score = 71.2 bits (173), Expect = 2e-11 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 4/127 (3%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTT----GQAATALRMLRENKDQFDLVISDVHMP 526 ++LAVDD+ L +++N+LRR + V GQ + +DL++ DV MP Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVDILDHVHGQPPDVFQ-------GYDLILLDVMMP 55 Query: 527 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 D+DGF+L + + +D P++ L+A E + ++KG+ G DY+ KP + +L + Sbjct: 56 DIDGFELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHL 115 Query: 707 RRNTKNR 727 RR +++ Sbjct: 116 RRERRDK 122
>Q6LA43:APRR2_ARATH Two-component response regulator-like APRR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 535 Score = 71.2 bits (173), Expect = 2e-11 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 7/138 (5%) Frame = +2 Query: 344 FPVGMRVLAV------DDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLV 505 FP G++VL + D D + + L DY VTT AL + +N + F + Sbjct: 14 FPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFHIA 73 Query: 506 ISDVHMP-DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 I +V+M + + FK LE + LP IM+S + T MK I GA ++L KP+ E+L Sbjct: 74 IVEVNMSAESESFKFLEAA--KDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKL 131 Query: 683 KTIWQHVIRRNTKNRGSD 736 K IWQHV+ + + GS+ Sbjct: 132 KNIWQHVVHKAFNDGGSN 149 Score = 45.1 bits (105), Expect = 0.001 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMN 1248 +A+P +IL+LM V +TR NVASHLQK+R + K + + + P N N Sbjct: 320 QAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYN 379 Score = 36.2 bits (82), Expect = 0.69 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +2 Query: 896 KPRVVWSVELHRKFVAAVNQLGIDSKNSLHVIVIINV 1006 + +V W+ ELH+KFV AV QLG+D ++ ++ V Sbjct: 296 RKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKV 332
>Q9TLQ4:YCF27_CYACA Probable transcriptional regulator ycf27 - Cyanidium caldarium| Length = 249 Score = 70.9 bits (172), Expect = 3e-11 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDD+ K+L+ L Y V+T AL++ + DL+I DV MP +DG+ Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTHS--IDLIILDVMMPKLDGY 71 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR---- 709 + + + E D+P+IML+A + + G+ GA DY++KP +L+ Q ++R Sbjct: 72 GVCQEIRKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRRIQT 131 Query: 710 RNTKNRGSDN 739 RN K + DN Sbjct: 132 RNAKLKPYDN 141
>P28257:YCF27_GALSU Probable transcriptional regulator ycf27 - Galdieria sulphuraria| (Red alga) Length = 255 Score = 70.5 bits (171), Expect = 3e-11 Identities = 40/121 (33%), Positives = 70/121 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L DD+ + ++LE L Y V T +AL + +K+ +LV+ DV MP +DG Sbjct: 9 KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLF--HKEHPNLVVLDVMMPKIDG 66 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + E D+P+IML+A G+ + G+ GA DY++KP ++L+ + V+RR Sbjct: 67 YGVCQEIRKESDIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRRVD 126 Query: 719 K 721 K Sbjct: 127 K 127
>P10577:NTRC_RHIME Nitrogen assimilation regulatory protein - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 484 Score = 70.5 bits (171), Expect = 3e-11 Identities = 51/135 (37%), Positives = 64/135 (47%), Gaps = 1/135 (0%) Frame = +2 Query: 353 GMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 G +L DDD VL L R Y V T AAT R + DLV++DV MPD Sbjct: 3 GATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDG--DLVVTDVVMPDE 60 Query: 533 DGFKLLELVG-LEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 + F LL + DLPV+++SA T +K GA DYL KP L +L I + Sbjct: 61 NAFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGRAL- 119 Query: 710 RNTKNRGSDNDDASQ 754 K R S +D SQ Sbjct: 120 AEPKRRPSKLEDDSQ 134
>Q9APD9:ZRAR_KLEOX Transcriptional regulatory protein zraR - Klebsiella oxytoca| Length = 443 Score = 69.7 bits (169), Expect = 6e-11 Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 1/109 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD + +L+ LLR Y V AL +RE FDLV+ D+ M +MDG Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKV--FDLVLCDIRMAEMDGI 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 + L E+ +PV++++A T ++ + GA DYL+KP+ ++L+ Sbjct: 66 ETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>P48259:YCF27_CYAPA Probable transcriptional regulator ycf27 - Cyanophora paradoxa| Length = 239 Score = 69.3 bits (168), Expect = 7e-11 Identities = 38/118 (32%), Positives = 68/118 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ + ++LE L Y V T AL + + + +LV+ DV MP +DG Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQ--LEHPNLVVLDVMMPKLDG 64 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + E D+P+IML+A G+ + G+ GA DY++KP ++L+ + ++RR Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122
>Q50136:PRRA_MYCLE Transcriptional regulatory protein prrA - Mycobacterium leprae| Length = 233 Score = 69.3 bits (168), Expect = 7e-11 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 1/129 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 RVL VDDD L LE LR + V+T A ALR E + D ++ D++MP +DG Sbjct: 9 RVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRP--DAIVLDINMPVLDG 66 Query: 539 FKLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 ++ L ++ D+PV +LSA + G+ GA DYL+KP L +L + ++RR Sbjct: 67 VSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRR 126 Query: 716 TKNRGSDND 742 S ++ Sbjct: 127 GATATSSSE 135
>P0A5Z4:MTRA_MYCTU DNA-binding response regulator mtrA - Mycobacterium tuberculosis| Length = 225 Score = 69.3 bits (168), Expect = 7e-11 Identities = 38/119 (31%), Positives = 68/119 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDDD + ++L +LR + G AL +RE + DLV+ D+ +P M+G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRP--DLVLLDLMLPGMNG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 + ++ + +P++ML+A +T V+ G+ GA DY++KP + ++L + +RRN Sbjct: 62 IDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
>Q93CB8:MTRA_MYCPA DNA-binding response regulator mtrA - Mycobacterium| paratuberculosis Length = 225 Score = 69.3 bits (168), Expect = 7e-11 Identities = 38/119 (31%), Positives = 68/119 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDDD + ++L +LR + G AL +RE + DLV+ D+ +P M+G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRP--DLVLLDLMLPGMNG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 + ++ + +P++ML+A +T V+ G+ GA DY++KP + ++L + +RRN Sbjct: 62 IDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
>Q9CCJ2:MTRA_MYCLE DNA-binding response regulator mtrA - Mycobacterium leprae| Length = 225 Score = 69.3 bits (168), Expect = 7e-11 Identities = 38/119 (31%), Positives = 68/119 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDDD + ++L +LR + G AL +RE + DLV+ D+ +P M+G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRP--DLVLLDLMLPGMNG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 + ++ + +P++ML+A +T V+ G+ GA DY++KP + ++L + +RRN Sbjct: 62 IDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
>P0A5Z5:MTRA_MYCBO DNA-binding response regulator mtrA - Mycobacterium bovis| Length = 225 Score = 69.3 bits (168), Expect = 7e-11 Identities = 38/119 (31%), Positives = 68/119 (57%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDDD + ++L +LR + G AL +RE + DLV+ D+ +P M+G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRP--DLVLLDLMLPGMNG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 + ++ + +P++ML+A +T V+ G+ GA DY++KP + ++L + +RRN Sbjct: 62 IDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRN 120
>P28835:YCF27_PORAE Probable transcriptional regulator ycf27 - Porphyridium aerugineum| Length = 240 Score = 68.9 bits (167), Expect = 1e-10 Identities = 37/127 (29%), Positives = 72/127 (56%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L +DD+ + ++LE L Y V + AL + + ++ +LV+ D+ MP +DG Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFK--REHPNLVVLDLMMPKLDG 62 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + E D+P+IML+A + + G+ GA DY++KP ++L+ + V+RR Sbjct: 63 YGVCQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRRVD 122 Query: 719 KNRGSDN 739 K ++N Sbjct: 123 KASSNNN 129
>Q23917:REGA_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA - Dictyostelium| discoideum (Slime mold) Length = 793 Score = 68.9 bits (167), Expect = 1e-10 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 12/129 (9%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP 526 P +R+L DDD K+L NLL++ Y+VT A + + + ++DLV++DV MP Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMP 216 Query: 527 DMDGFKLLELVG---LEMDLPVIMLSANG-ETQTVMKGITHGACDYLLKPVRLEQLK--- 685 + GF LL+ + + +PVI++S + + I G D+L KP+ E LK Sbjct: 217 HITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 276 Query: 686 -----TIWQ 697 +IWQ Sbjct: 277 DTVLQSIWQ 285
>Q04942:AFSQ1_STRCO Transcriptional regulatory protein afsQ1 - Streptomyces coelicolor| Length = 225 Score = 68.9 bits (167), Expect = 1e-10 Identities = 39/120 (32%), Positives = 65/120 (54%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L ++DD LE L R + V T L++LRE + DL++ DV +P +DGF Sbjct: 4 LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQRP--DLIVLDVMLPGIDGF 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 ++ + LP+I+L+A + V+ G+ GA DY++KPV+ L + V+RR + Sbjct: 62 EVCRRIRRTDQLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGER 121
>P0AFU4:YFHA_ECOLI Uncharacterized protein yfhA - Escherichia coli| Length = 444 Score = 68.2 bits (165), Expect = 2e-10 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDDP LK+L L Y V T A LR+L N+++ DLVISD+ M +MDG Sbjct: 8 LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVL--NREKVDLVISDLRMDEMDGM 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 +L E+ ++ +PVI+L+A+G + G +L KPV + L Sbjct: 66 QLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P0AFU5:YFHA_ECO57 Uncharacterized protein yfhA - Escherichia coli O157:H7| Length = 444 Score = 68.2 bits (165), Expect = 2e-10 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDDP LK+L L Y V T A LR+L N+++ DLVISD+ M +MDG Sbjct: 8 LLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVL--NREKVDLVISDLRMDEMDGM 65 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 +L E+ ++ +PVI+L+A+G + G +L KPV + L Sbjct: 66 QLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P31079:PETR_RHOCA Protein petR - Rhodobacter capsulatus (Rhodopseudomonas capsulata)| Length = 237 Score = 67.4 bits (163), Expect = 3e-10 Identities = 42/117 (35%), Positives = 66/117 (56%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L VDDD +L+ L R + VT AA A R+L + +F+L++ DV MP DG Sbjct: 9 LLIVDDDERIRGLLQKFLIRNGFLVTAGRDAAHARRLL--SGLEFNLIVLDVMMPGEDGL 66 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 L + +M P+++L+A GET+ ++G+ GA DYL KP ++L ++RR Sbjct: 67 SLTRDLRTKMATPILLLTARGETRERIEGLEAGADDYLPKPFEPKELLLRINAILRR 123
>P14376:RCSC_ECOLI Sensor kinase protein rcsC - Escherichia coli| Length = 949 Score = 67.0 bits (162), Expect = 4e-10 Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M +L VDD P ++L + L Y T AL +L +K+ D+V+SDV+MP+MD Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--SKNHIDIVLSDVNMPNMD 882 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G++L + + L + LPVI ++AN + + + G L KPV L+ +K R Sbjct: 883 GYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 942 Query: 713 NTKNRGS 733 K+R S Sbjct: 943 VRKSRDS 949
>Q56128:RCSC_SALTI Sensor protein rcsC - Salmonella typhi| Length = 948 Score = 65.9 bits (159), Expect = 8e-10 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M +L VDD P ++L + L Y T AL +L +K+ D+V+SDV+MP+MD Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--SKNAIDIVLSDVNMPNMD 882 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G++L + + L + LPV+ ++AN + + + G L KPV L+ LK R Sbjct: 883 GYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALKQTLAVYAER 942 Query: 713 NTKNR 727 K R Sbjct: 943 VRKTR 947
>P58662:RCSC_SALTY Sensor protein rcsC - Salmonella typhimurium| Length = 948 Score = 65.5 bits (158), Expect = 1e-09 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M +L VDD P ++L + L Y T AL +L +K+ D+V+SDV+MP+MD Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--SKNAIDIVLSDVNMPNMD 882 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G++L + + L + LPV+ ++AN + + + G L KPV L+ LK R Sbjct: 883 GYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLAVYAER 942 Query: 713 NTKNR 727 K R Sbjct: 943 VRKTR 947
>Q06065:ATOC_ECOLI Acetoacetate metabolism regulatory protein atoC - Escherichia coli| Length = 461 Score = 65.5 bits (158), Expect = 1e-09 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD+ ++L + TAL + + D+V+ D+ MP+MDG Sbjct: 6 RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHP--DVVLMDIRMPEMDG 63 Query: 539 FKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 K L E+ E PVI+++A E +T ++ + GA DY++KP L++L I Q ++ Sbjct: 64 IKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQ 121
>Q9LYP5:ARR21_ARATH Putative two-component response regulator ARR21 - Arabidopsis| thaliana (Mouse-ear cress) Length = 592 Score = 65.5 bits (158), Expect = 1e-09 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 + V+ VDDD L ++ +L+ Y V AL L+ +D DL+I+D +MP M+ Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75 Query: 536 GFKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI-- 706 G +L + + E +LPV+++S+ +T + ++ GA ++ KP+ L I+Q + Sbjct: 76 GLQLKKQITQEFGNLPVLVMSS--DTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSN 133 Query: 707 RRNTKN 724 +RN K+ Sbjct: 134 KRNGKS 139 Score = 59.7 bits (143), Expect = 6e-08 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMN 1248 +AVPKKIL M+V +TRENVASHLQKYR++L+R++ + L + L R ++ Sbjct: 246 KAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVA-----EQGLYSMLSDR-----GID 295 Query: 1249 SMDVFRHYNNAYGRYRPVPTSTH-SQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQN 1425 SM H Y Y TS + ++ NN +G LLS +P+ Sbjct: 296 SMFRQTHIKEPYFNYYTPSTSWYDTRLNNRSFYSKPVHGFGQSKLLSTTREPVCFNQMPY 355 Query: 1426 NNLGTSLN 1449 N + +L+ Sbjct: 356 NYMNRNLS 363
>Q9C9F6:APRR6_ARATH Putative two-component response regulator-like APRR6 - Arabidopsis| thaliana (Mouse-ear cress) Length = 663 Score = 65.5 bits (158), Expect = 1e-09 Identities = 33/120 (27%), Positives = 67/120 (55%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L +D D + L ++L++ V + A+ AL M+ + K + L+I+++ MP +D Sbjct: 15 ILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHIDSH 74 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 L + L+ D+P+I+++ +T+ +T AC L KP+ + +K +WQHV + ++ Sbjct: 75 SFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKKSQ 133
>O80366:ARR9_ARATH Two-component response regulator ARR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 234 Score = 65.1 bits (157), Expect = 1e-09 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 22/144 (15%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRML--RENKDQFD------------ 499 VLAVDD K++E LL++ VTT + AL L R++ D D Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70 Query: 500 -----LVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYL 655 L+I+D MP M G+ LL+ V D+PV+++S+ + + + GA ++ Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130 Query: 656 LKPVRLEQLKTIWQHVIRRNTKNR 727 LKPVRL L + H+++ KN+ Sbjct: 131 LKPVRLADLNKLKPHMMKTKLKNQ 154
>Q07597:NISR_LACLA Nisin biosynthesis regulatory protein nisR - Lactococcus lactis| subsp. lactis (Streptococcus lactis) Length = 229 Score = 64.7 bits (156), Expect = 2e-09 Identities = 35/123 (28%), Positives = 67/123 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD LK+++ L +Y V T + L + + FDL++ D+ M +++G Sbjct: 4 KILIVDDDQEILKLMKTALEMRNYEVATHQNISLPLDIT--DFQGFDLILLDIMMSNIEG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 ++ + + E+ P+I +SA + ++ G+ G DY+ KP L+QL + I+R Sbjct: 62 TEICKRIRREISTPIIFVSAKDTEEDIINGLGIGGDDYITKPFSLKQLVAKVEANIKREE 121 Query: 719 KNR 727 +N+ Sbjct: 122 RNK 124
>P96602:DCTR_BACSU Probable C4-dicarboxylate response regulator dctR - Bacillus| subtilis Length = 226 Score = 64.7 bits (156), Expect = 2e-09 Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVT--TTGQAATALRMLRENKDQFDLVISDVHMPDM 532 +VL ++DDP +V ++ + T G +++++E +Q DLVI DV+MP Sbjct: 7 KVLLIEDDPMVQEVNKDFITTVKGVTVCATAGNGEEGMKLIKE--EQPDLVILDVYMPKK 64 Query: 533 DGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 DG K L E+ ++++ VI++SA + +T+ + +GA DY+LKP +LE+++ + Sbjct: 65 DGIKTLQEIRKQKLEVDVIVVSAAKDKETISLMLQNGAVDYILKPFKLERMRQALEKY-- 122 Query: 710 RNTKNRGSDNDDASQ 754 + K + ND SQ Sbjct: 123 KQYKQKIEANDTLSQ 137
>Q44006:CZCR_RALME Transcriptional activator protein czcR - Ralstonia metallidurans| (strain CH34 / ATCC 43123 / DSM 2839) Length = 225 Score = 64.7 bits (156), Expect = 2e-09 Identities = 36/121 (29%), Positives = 63/121 (52%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+P + L+ L + V L M E +D++I DV +P MD Sbjct: 1 MRVLVVEDEPRTAEYLQKGLSESGFVVDIANNGGDGLHMAEET--DYDVIILDVMLPGMD 58 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 G+ +++ + + + PV+ L+A + ++G GA DYL+KP +L + +R++ Sbjct: 59 GWTVIKSIRSKSETPVLFLTALDDVADRVRGFELGADDYLVKPFAFAELLARIRRCLRQS 118 Query: 716 T 718 T Sbjct: 119 T 119
>P0AEC5:BARA_ECOLI Signal transduction histidine-protein kinase barA - Escherichia coli| Length = 918 Score = 64.7 bits (156), Expect = 2e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + M V+AVDD+P LK++ LL HV A+ R + FDL++ D+ MPD Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE--RAKQMPFDLILMDIQMPD 723 Query: 530 MDGFKLLELVGL---EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 MDG + EL+ + PVI ++A+ K + G DYL KP+ E+L + Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P0AEC6:BARA_ECOL6 Signal transduction histidine-protein kinase barA - Escherichia coli| O6 Length = 918 Score = 64.7 bits (156), Expect = 2e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + M V+AVDD+P LK++ LL HV A+ R + FDL++ D+ MPD Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE--RAKQMPFDLILMDIQMPD 723 Query: 530 MDGFKLLELVGL---EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 MDG + EL+ + PVI ++A+ K + G DYL KP+ E+L + Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P0AEC7:BARA_ECO57 Signal transduction histidine-protein kinase barA - Escherichia coli| O157:H7 Length = 918 Score = 64.7 bits (156), Expect = 2e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + M V+AVDD+P LK++ LL HV A+ R + FDL++ D+ MPD Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE--RAKQMPFDLILMDIQMPD 723 Query: 530 MDGFKLLELVGL---EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 MDG + EL+ + PVI ++A+ K + G DYL KP+ E+L + Sbjct: 724 MDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P59342:BARA_SHIFL Signal transduction histidine-protein kinase barA - Shigella flexneri| Length = 918 Score = 64.3 bits (155), Expect = 2e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + M V+AVDD+P LK++ LL HV A+ R + FDL++ D+ MPD Sbjct: 666 LAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE--RAKQMPFDLILMDIQMPD 723 Query: 530 MDGFKLLELVGL---EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 MDG + EL+ + PVI ++A+ K + G DYL KP+ E+L + Sbjct: 724 MDGIRACELIHQLPHQRQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>P51343:YCF29_PORPU Probable transcriptional regulator ycf29 - Porphyra purpurea| Length = 209 Score = 63.5 bits (153), Expect = 4e-09 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 ++ V++D K ++ L ++V A ++ NK +FDL+ISD+ MP +DG+ Sbjct: 5 LMLVENDTVLSKAIQEYLIDQGFNVDIALNGLEAFQLA--NKYKFDLIISDIIMPIIDGY 62 Query: 542 KLLEL---VGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 +LLE + +PVI L+A G T+ +KG G YL KP E+L ++ +++I R Sbjct: 63 ELLEKLRKIDKLAKIPVIFLTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKNLIYR 122 Query: 713 ---NTKNRGSDNDD 745 N++N N D Sbjct: 123 DSLNSQNLKKQNSD 136
>P09432:NTRC_RHOCA Nitrogen regulation protein ntrC - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 457 Score = 63.5 bits (153), Expect = 4e-09 Identities = 44/108 (40%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 VL DDD T VL L R V T T +R + E K DLVISDV MPD +G Sbjct: 5 VLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKG--DLVISDVVMPDGNGL 62 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 + L + E LPVI++SA T ++ A DYL KP L L Sbjct: 63 EALARIARERPGLPVIVISAQNTIMTAIQAAEADAYDYLPKPFDLPDL 110
>Q8D0P1:CHEY_YERPE Chemotaxis protein cheY - Yersinia pestis| Length = 129 Score = 63.5 bits (153), Expect = 4e-09 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 +R L VDD T +++ NLL+ +H V AL LR FD V+SD +MP+M Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGG--FDFVVSDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P28787:NTRC_PROVU Nitrogen regulation protein NR(I) - Proteus vulgaris| Length = 473 Score = 63.2 bits (152), Expect = 5e-09 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V VDDD + VLE + R A L+ L N +Q D+++SD+ MPDMDG Sbjct: 6 VWVVDDDSSIRWVLERAITREGMLCRAFEHANDVLKAL--NSEQPDVLLSDIRMPDMDGL 63 Query: 542 KLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 LL+++ + LPVI+++A+ + + GA DYL KP +++ + + I Sbjct: 64 SLLKIIKEQYPTLPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLALIERAITHYR 123 Query: 719 KNRGSDN 739 + + +N Sbjct: 124 EQKQPNN 130
>O23100:APRR8_ARATH Putative two-component response regulator-like APRR8 - Arabidopsis| thaliana (Mouse-ear cress) Length = 367 Score = 63.2 bits (152), Expect = 5e-09 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD-QFDLVISDVHMPDMDG 538 VL +D D TCL L ++R+C Y V T + A L ++ NKD + DLV+++ + +M+ Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTR-ADDLPLIINNKDKKIDLVLAEFRLIEMNK 74 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 ++LLE + ++PV++ A+ + +++ + GA L KP+ K +WQ + R Sbjct: 75 YELLEKIRSICEIPVVVSGAHVK-DAIVECLCRGAKLCLEKPLMENDFKILWQFTVSRQR 133 Query: 719 KNR 727 R Sbjct: 134 NFR 136
>P13632:DCTD_RHIME C4-dicarboxylate transport transcriptional regulatory protein dctD| - Rhizobium meliloti (Sinorhizobium meliloti) Length = 460 Score = 62.4 bits (150), Expect = 9e-09 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V +DDD K ++ L + V++ A AL L + D +VISD+ MP MDG Sbjct: 7 VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGL--SADFAGIVISDIRMPGMDGL 64 Query: 542 KLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 L +++ L+ DLP+I+++ +G+ ++ I GA D++ KP ++L Sbjct: 65 ALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>Q45994:CTRA_CAUCR Cell cycle transcriptional regulator ctrA - Caulobacter crescentus| (Caulobacter vibrioides) Length = 231 Score = 62.4 bits (150), Expect = 9e-09 Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 3/123 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTT--GQAATALRMLRENKDQFDLVISDVHMPD 529 MRVL ++DD + +E +L+ ++V TT G+ L + + +DL++ D+++PD Sbjct: 1 MRVLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKIYD----YDLILLDLNLPD 56 Query: 530 MDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 M G +L + + +++ P+++LS + E T +K GA DY+ KP +++ V+ Sbjct: 57 MSGIDVLRTLRVAKINTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEMIARIHAVV 116 Query: 707 RRN 715 RR+ Sbjct: 117 RRS 119
>Q9ZWS7:ARR7_ARATH Two-component response regulator ARR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 62.4 bits (150), Expect = 9e-09 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 12/134 (8%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLREN--------KD-QFDLVI 508 + VLAVDD KV+E LLR VTT AL+ L + KD + +L++ Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83 Query: 509 SDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ 679 +D MP + G+ LL+ + ++PV+++S+ + + + GA ++LLKPV+L Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143 Query: 680 LKTIWQHVIRRNTK 721 +K I Q ++R + Sbjct: 144 VKRIKQLIMRNEAE 157
>Q4L6C6:ARLR_STAHJ Response regulator arlR - Staphylococcus haemolyticus (strain| JCSC1435) Length = 219 Score = 62.4 bits (150), Expect = 9e-09 Identities = 34/117 (29%), Positives = 63/117 (53%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L V+D+ + LE L +Y V + L N +DL+I D+ +P+++G Sbjct: 4 ILIVEDEQNLARFLELELTHDNYSVDIEYEGQAGLDKALSNN--YDLIILDLMLPNINGL 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ V E P+I+++A +T + G+ +GA DY++KP +E+L + V+RR Sbjct: 62 EICRRVRQEQSTPIIIITAKSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRR 118
>P0AE90:CPXR_SHIFL Transcriptional regulatory protein cpxR - Shigella flexneri| Length = 232 Score = 62.0 bits (149), Expect = 1e-08 Identities = 41/129 (31%), Positives = 63/129 (48%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +L+ LL ++V AL +L D DL++ DV MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLL---DDSIDLLLLDVMMPKKNG 59 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L+ + PVIML+A G + G+ GA DYL KP +L + ++RR+ Sbjct: 60 IDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSH 119 Query: 719 KNRGSDNDD 745 + N+D Sbjct: 120 WSEQQQNND 128
>P0AE88:CPXR_ECOLI Transcriptional regulatory protein cpxR - Escherichia coli| Length = 232 Score = 62.0 bits (149), Expect = 1e-08 Identities = 41/129 (31%), Positives = 63/129 (48%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +L+ LL ++V AL +L D DL++ DV MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLL---DDSIDLLLLDVMMPKKNG 59 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L+ + PVIML+A G + G+ GA DYL KP +L + ++RR+ Sbjct: 60 IDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSH 119 Query: 719 KNRGSDNDD 745 + N+D Sbjct: 120 WSEQQQNND 128
>P0AE89:CPXR_ECO57 Transcriptional regulatory protein cpxR - Escherichia coli O157:H7| Length = 232 Score = 62.0 bits (149), Expect = 1e-08 Identities = 41/129 (31%), Positives = 63/129 (48%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +L+ LL ++V AL +L D DL++ DV MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLL---DDSIDLLLLDVMMPKKNG 59 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L+ + PVIML+A G + G+ GA DYL KP +L + ++RR+ Sbjct: 60 IDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSH 119 Query: 719 KNRGSDNDD 745 + N+D Sbjct: 120 WSEQQQNND 128
>Q9ZVD3:ARR13_ARATH Putative two-component response regulator ARR13 - Arabidopsis| thaliana (Mouse-ear cress) Length = 572 Score = 62.0 bits (149), Expect = 1e-08 Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 2/129 (1%) Frame = +1 Query: 1069 EAVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMN 1248 + VPKKIL +MNV +TRENVASHLQKYRL++KR+ GR S+ Sbjct: 249 KVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRVVHQ------------GRFSMLSDRG 296 Query: 1249 SMDVFR--HYNNAYGRYRPVPTSTHSQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQ 1422 +FR H Y Y TS + S N S S +G LLS +P+ Sbjct: 297 KDSMFRQTHIKEPYVNYYTPSTSWYETSLN-NRSFYSESVHGHSRLLSEAREPVRYNQMS 355 Query: 1423 NNNLGTSLN 1449 N + +++ Sbjct: 356 YNYMNRNIS 364 Score = 53.1 bits (126), Expect = 5e-06 Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 6/129 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH---VTTTGQAATALRMLRENKDQFDLVISDVHMP 526 + V+ VDD+ L + +L + Y V AL L+ +D DL+I+D +MP Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75 Query: 527 DMDGFKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 M+G +L + + E +L V+++S++ + + ++ GA ++ KP+ L I+Q Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEE--ESLSCGAMGFIPKPIAPTDLPKIYQFA 133 Query: 704 I--RRNTKN 724 + +RN K+ Sbjct: 134 LTYKRNGKS 142
>P54443:YRKP_BACSU Uncharacterized sensory transduction protein yrkP - Bacillus| subtilis Length = 231 Score = 61.2 bits (147), Expect = 2e-08 Identities = 37/120 (30%), Positives = 58/120 (48%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+DD +LE L R Y V AL+++ D DLVI D+ MP + G Sbjct: 4 RILVVEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLVN---DSLDLVILDIMMPGISG 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + ++P++ L+A T +G+ G DY+ KP E+L +RR T Sbjct: 61 IETCQHIRKSSNVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEELHARVIAQLRRYT 120
>Q44929:GTCR_ANEMI Response regulator gtcR - Aneurinibacillus migulanus| Length = 242 Score = 61.2 bits (147), Expect = 2e-08 Identities = 34/101 (33%), Positives = 55/101 (54%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L DD+P +++L+ L R Y + A +R++ DL I D+ MP +DGF Sbjct: 5 ILIADDEPEIIELLKLFLERESYRIIEAYDGEQAWNYIRQHP--VDLAIIDIMMPALDGF 62 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 +L++ + E LPVI+LSA + G+ GA D++ KP Sbjct: 63 QLIKRLTNEYKLPVIILSAKNRDSDKILGLGLGADDFISKP 103
>P48359:YCF29_CYAPA Probable transcriptional regulator ycf29 - Cyanophora paradoxa| Length = 210 Score = 60.8 bits (146), Expect = 3e-08 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 + +L +D D L+ L +HV + A +L+ K DL+I D+ MP M Sbjct: 2 INILILDTDIGIRNSLKLYLTEIGFHVEESTCVDQAWDILKRKK--IDLIICDIIMPGMG 59 Query: 536 GFKLLELVGLEMD---LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 GF L + L D LPVI+L+ G TQ + G G Y+ KP +E+L I + V+ Sbjct: 60 GFNFLHQLRLNTDYCTLPVILLTTRGLTQDRIIGYKTGCDSYISKPFNIEELVVIIEGVL 119 Query: 707 RRNT 718 R+T Sbjct: 120 NRHT 123
>Q9KT84:LUXO1_VIBCH Regulatory protein luxO - Vibrio cholerae| Length = 455 Score = 60.8 bits (146), Expect = 3e-08 Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 V+D + + + L D + G A+ + + DL++ D+ +PDM G +L Sbjct: 2 VEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREP--DLILLDLRLPDMTGMDVL 59 Query: 551 ELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNR 727 V + D+P++ ++A+G T ++ + HGA D+L+KP ++L+ + IR+ +K + Sbjct: 60 YAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLK 119 Query: 728 GSDNDDASQ 754 +D D+ +Q Sbjct: 120 -NDVDNKNQ 127
>Q51455:CHEY_PSEAE Chemotaxis protein cheY - Pseudomonas aeruginosa| Length = 124 Score = 60.8 bits (146), Expect = 3e-08 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQA---ATALRMLRENKDQFDLVISDVHMP 526 M++L VDD T ++++NLLR D T T +A TAL ML FD +++D +MP Sbjct: 1 MKILIVDDFSTMRRIIKNLLR--DLGFTNTAEADDGTTALPMLHSGN--FDFLVTDWNMP 56 Query: 527 DMDGFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQ 697 M G LL V + LPV+M++A + +++ G Y++KP + LK + Sbjct: 57 GMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIE 116 Query: 698 HVIRR 712 + R Sbjct: 117 KIFER 121
>P37478:YYCF_BACSU Transcriptional regulatory protein yycF - Bacillus subtilis| Length = 235 Score = 60.5 bits (145), Expect = 3e-08 Identities = 38/131 (29%), Positives = 66/131 (50%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ +LE LR+ Y V A+ M+ E Q DL++ D+ +P+ DG Sbjct: 4 KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEEL--QPDLILLDIMLPNKDG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 ++ V + D+P+IML+A + G+ GA DY+ KP +L + +RR Sbjct: 62 VEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQL 121 Query: 719 KNRGSDNDDAS 751 ++ + +S Sbjct: 122 TTAPAEEEPSS 132
>P30855:EVGS_ECOLI Sensor protein evgS precursor - Escherichia coli| Length = 1197 Score = 60.5 bits (145), Expect = 3e-08 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP 526 P + +L DD PT +L+ L Y V AL + + +DL+I+DV+MP Sbjct: 956 PEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV--SMQHYDLLITDVNMP 1013 Query: 527 DMDGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 688 +MDGF+L +L LP+ L+AN + KG++ G L KP+ L+ LKT Sbjct: 1014 NMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKT 1068
>Q9RC52:CITT_BACHD Transcriptional regulatory protein citT - Bacillus halodurans| Length = 230 Score = 60.1 bits (144), Expect = 4e-08 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYH--VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 +VL ++DD ++ E ++ Y ++T AL L E DL++ DV++PD+ Sbjct: 6 KVLIIEDDFRVAQIQEQMVNDHPYFHVISTCRTGGEALDYLSEKAAALDLILLDVYIPDV 65 Query: 533 DGFKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G +LL + + D+ ++M++A E TV + + G DYLLKPV+ E L Sbjct: 66 KGLELLWAIREKFRDVDIMMVTAAKEVDTVQEALRGGIIDYLLKPVQKEVL 116
>Q93P00:CHEY_YEREN Chemotaxis protein cheY - Yersinia enterocolitica| Length = 129 Score = 60.1 bits (144), Expect = 4e-08 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 +R L VDD T +++ NLL+ ++ V AL LR FD V+SD +MP+M Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRTGG--FDFVVSDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P13792:PHOP_BACSU Alkaline phosphatase synthesis transcriptional regulatory protein| phoP - Bacillus subtilis Length = 240 Score = 59.7 bits (143), Expect = 6e-08 Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ + + +L+ L R Y V T AL+ K DL++ DV +P +DG Sbjct: 4 KILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKP--DLIVLDVMLPKLDG 61 Query: 539 FKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 ++ +L ++ P++ML+A E + G+ GA DY+ KP ++ + ++RR+ Sbjct: 62 IEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRRS 121
>Q87MX7:LUXO_VIBPA Regulatory protein luxO - Vibrio parahaemolyticus| Length = 453 Score = 59.7 bits (143), Expect = 6e-08 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 V+D + + + L + G A+ L DL++ D+ +PDM G +L Sbjct: 2 VEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIP--DLILLDLRLPDMTGMDVL 59 Query: 551 ELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNR 727 V D+P+I ++A+G T ++ + HG+ D+L+KP ++L+ + IR+ TK + Sbjct: 60 HAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLK 119 Query: 728 GSDNDDASQ 754 ++ +Q Sbjct: 120 NEADNPGNQ 128
>P54299:LUXO_VIBHA Luminescence regulatory protein luxO - Vibrio harveyi| Length = 453 Score = 59.7 bits (143), Expect = 6e-08 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 V+D + + + L + G A+ L DL++ D+ +PDM G +L Sbjct: 2 VEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIP--DLILLDLRLPDMTGMDVL 59 Query: 551 ELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNR 727 V D+P+I ++A+G T ++ + HG+ D+L+KP ++L+ + IR+ TK + Sbjct: 60 HAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLK 119 Query: 728 GSDNDDASQ 754 ++ +Q Sbjct: 120 NEADNPGNQ 128
>Q9K998:DCTR_BACHD Probable C4-dicarboxylate response regulator dctR - Bacillus| halodurans Length = 230 Score = 59.7 bits (143), Expect = 6e-08 Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 5/138 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALR-MLRENKDQFDLVISDVHMPDM 532 +RVL ++DDP +V + + T G AT M++ + Q DL++ D+ MP Sbjct: 7 IRVLLIEDDPMVQEVNRMFVEKLS-GFTIVGTTATGEEGMVKTRELQPDLILLDIFMPKQ 65 Query: 533 DGFKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK---TIWQH 700 DG ++ + + +D+ +I ++A +T+T+ + +G DYL+KP E+LK T ++ Sbjct: 66 DGLSFIKQIREQYIDVDIIAVTAANDTKTIKTLLRYGVMDYLVKPFTFERLKAALTQYEE 125 Query: 701 VIRRNTKNRGSDNDDASQ 754 + R+ K D + Sbjct: 126 MFRKMQKEAELSQDSLDE 143
>Q9ZWS6:ARR6_ARATH Two-component response regulator ARR6 - Arabidopsis thaliana| (Mouse-ear cress) Length = 186 Score = 59.7 bits (143), Expect = 6e-08 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 12/127 (9%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQ---------FD 499 P + VLAVDD K +E LLR VT A AL+ L + ++ + Sbjct: 22 PDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVN 81 Query: 500 LVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVR 670 L+++D MP M G++LL+ + ++PV+++S+ + + + GA D+LLKPV+ Sbjct: 82 LIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 141 Query: 671 LEQLKTI 691 L +K + Sbjct: 142 LSDVKRL 148
>Q9SB04:ARR5_ARATH Two-component response regulator ARR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 184 Score = 59.7 bits (143), Expect = 6e-08 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLR---ENKD-------QF 496 P + VLAVDD K +E LLR VT A AL+ L EN + Sbjct: 22 PKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKI 81 Query: 497 DLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPV 667 +L+++D MP M G++LL+ + ++PV+++S+ + + + GA D+LLKPV Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141 Query: 668 RLEQLKTI 691 +L +K + Sbjct: 142 KLADVKRL 149
>O82798:ARR4_ARATH Two-component response regulator ARR4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 259 Score = 59.7 bits (143), Expect = 6e-08 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 12/130 (9%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQ---------FDLVI 508 + VLAVDD V+E LLR VT AL L + ++ DL+I Sbjct: 34 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLII 93 Query: 509 SDVHMPDMDGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ 679 +D MP M G++LL+ + ++PV+++S+ + + + GA D+LLKPV+L Sbjct: 94 TDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLAD 153 Query: 680 LKTIWQHVIR 709 +K + H+ + Sbjct: 154 VKRLRSHLTK 163
>Q7G8V2:ARR15_ARATH Two-component response regulator ARR15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 59.7 bits (143), Expect = 6e-08 Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 12/137 (8%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD---------QFDLVI 508 + VLAVDD KV+E LL+ VTT AL+ L + D + +L++ Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77 Query: 509 SDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ 679 +D MP + G++LL+ + ++PV+++S+ + + + GA ++LLKPV+L Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137 Query: 680 LKTIWQHVIRRNTKNRG 730 +K + + ++R G Sbjct: 138 VKRLKELIMRGGEAEEG 154
>Q9AE24:RPRY_BACFR Transcriptional regulatory protein rprY - Bacteroides fragilis| Length = 236 Score = 59.3 bits (142), Expect = 8e-08 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +R+L +DD +L L+ Y + +NK +DL + DV MP D Sbjct: 8 LRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGFKAFLKNK--YDLCVFDVMMPKKD 65 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR- 709 GF L + V ++P+I L+A + +++G GA DY+ KP +E+L + ++R Sbjct: 66 GFTLAQEVRAANAEIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRR 125 Query: 710 -RNTKNRGSD 736 R KN+ S+ Sbjct: 126 VRGKKNKESN 135
>Q7MM78:LUXO_VIBVY Regulatory protein luxO - Vibrio vulnificus (strain YJ016)| Length = 453 Score = 59.3 bits (142), Expect = 8e-08 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 V+D + + + L + G A+ L+ DL++ D+ +PDM G +L Sbjct: 2 VEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIP--DLILLDLRLPDMTGMDVL 59 Query: 551 ELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNR 727 V D+P+I ++A+G T ++ + HG+ D+L+KP ++L+ + IR+ +K + Sbjct: 60 HAVKASHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLK 119 Query: 728 GSDNDDASQ 754 + SQ Sbjct: 120 NDADSAGSQ 128
>Q8CWJ5:LUXO_VIBVU Regulatory protein luxO - Vibrio vulnificus| Length = 453 Score = 59.3 bits (142), Expect = 8e-08 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 V+D + + + L + G A+ L+ DL++ D+ +PDM G +L Sbjct: 2 VEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIP--DLILLDLRLPDMTGMDVL 59 Query: 551 ELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTKNR 727 V D+P+I ++A+G T ++ + HG+ D+L+KP ++L+ + IR+ +K + Sbjct: 60 HAVKASHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLK 119 Query: 728 GSDNDDASQ 754 + SQ Sbjct: 120 NDADSAGSQ 128
>Q9ZWS9:ARR3_ARATH Two-component response regulator ARR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 231 Score = 59.3 bits (142), Expect = 8e-08 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 12/130 (9%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQ---------FDLVI 508 + VLAVDD V+E LLR VT AL L + D+ DL+I Sbjct: 33 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLII 92 Query: 509 SDVHMPDMDGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ 679 +D MP M G++LL+ + ++PV+++S+ + + + GA D+LLKPV+L Sbjct: 93 TDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLAD 152 Query: 680 LKTIWQHVIR 709 +K + ++ R Sbjct: 153 VKRLRSYLTR 162
>P0C001:ARLR_STAAW Response regulator arlR - Staphylococcus aureus (strain MW2)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q6G9E6:ARLR_STAAS Response regulator arlR - Staphylococcus aureus (strain MSSA476)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q6GGZ3:ARLR_STAAR Response regulator arlR - Staphylococcus aureus (strain MRSA252)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q99U73:ARLR_STAAN Response regulator arlR - Staphylococcus aureus (strain N315)| Length = 214 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>P0C000:ARLR_STAAM Response regulator arlR - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q5HG04:ARLR_STAAC Response regulator arlR - Staphylococcus aureus (strain COL)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q2YY03:ARLR_STAAB Response regulator arlR - Staphylococcus aureus (strain bovine| RF122) Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q9KJN4:ARLR_STAA8 Response regulator arlR - Staphylococcus aureus (strain NCTC 8325)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q2FH23:ARLR_STAA3 Response regulator arlR - Staphylococcus aureus (strain USA300)| Length = 219 Score = 59.3 bits (142), Expect = 8e-08 Identities = 31/118 (26%), Positives = 64/118 (54%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + LE L +Y+V T L + +DL+I D+ +P ++G Sbjct: 3 QILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSH--YYDLIILDLMLPSING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRKIRQQQSTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRR 118
>Q9F868:REGX3_MYCS2 Sensory transduction protein regX3 - Mycobacterium smegmatis| (strain ATCC 700084 / mc(2)155) Length = 228 Score = 58.9 bits (141), Expect = 1e-07 Identities = 40/129 (31%), Positives = 64/129 (49%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 VL V+D+ + L LLR+ + T G +AL + D+V+ D+ +P M G Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFE--RSGADIVLLDLMLPGMSGT 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 + + + +PVIM++A + G+ GA DY+ KP +L + V+R Sbjct: 62 DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR---- 117 Query: 722 NRGSDNDDA 748 RG+DNDDA Sbjct: 118 -RGADNDDA 125
>P10046:DCTD_RHILE C4-dicarboxylate transport transcriptional regulatory protein dctD| - Rhizobium leguminosarum Length = 448 Score = 58.9 bits (141), Expect = 1e-07 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M V +DDD + L + V+ A AL L D V++D+ MP++D Sbjct: 5 MPVALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPA--DFAGPVVTDIRMPEID 62 Query: 536 GFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G +L L G+++DLPVI+++ +G+ ++ I GA D++ KP ++L Q V R Sbjct: 63 GLQLFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLV---QSVRRA 119 Query: 713 NTKNR 727 + K R Sbjct: 120 SEKRR 124
>P58402:EVGS_ECO57 Sensor protein evgS precursor - Escherichia coli O157:H7| Length = 1197 Score = 58.5 bits (140), Expect = 1e-07 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Frame = +2 Query: 347 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP 526 P + +L DD PT +L+ L Y V AL + + +DL+I+DV+MP Sbjct: 956 PEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV--SMQHYDLLITDVNMP 1013 Query: 527 DMDGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 688 ++DGF+L +L LP+ L+AN + KG+ G L KP+ L+ LKT Sbjct: 1014 NVDGFELTRKLREQNSSLPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKT 1068
>O31395:IRLR_BURPS Transcriptional activator protein irlR - Burkholderia pseudomallei| (Pseudomonas pseudomallei) Length = 229 Score = 58.2 bits (139), Expect = 2e-07 Identities = 35/119 (29%), Positives = 59/119 (49%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L V+D+P L L + T L + +++DL+I DV +P D Sbjct: 1 MRILIVEDEPKTGMYLRKGLTEAGFIADWVEDGVTGLH--QAETEEYDLIILDVMLPGHD 58 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G+ +LE + PV+ L+A + +KG+ GA DY++KP +L + ++RR Sbjct: 59 GWTVLERLRRAHSTPVLFLTARDDVGDRVKGLELGADDYVVKPFDFVELVARVRSILRR 117
>P50350:CHVI_RHIME Transcriptional regulatory protein chvI - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 240 Score = 58.2 bits (139), Expect = 2e-07 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 + VDDD L + L Y V T A+AL L Q L I D+ MP MDG Sbjct: 4 IALVDDDRNILTSVSIALEAEGYKVETYTDGASALEGLLARPPQ--LAIFDIKMPRMDGM 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP----VRLEQLKTIWQHVIR 709 +LL + + DLPVI L++ E + G+ GA D++ KP + +E++K I + Sbjct: 62 ELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRAAN 121 Query: 710 RNTKNRGS 733 R G+ Sbjct: 122 REAAAGGT 129
>O80365:ARR8_ARATH Two-component response regulator ARR8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 225 Score = 58.2 bits (139), Expect = 2e-07 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 20/140 (14%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFD-------------- 499 VLAVDD K++E LL++ VTT + AL L D D Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70 Query: 500 ---LVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLK 661 L+I+D MP M G+ LL+ V +PV+++S+ + + + GA ++ LK Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130 Query: 662 PVRLEQLKTIWQHVIRRNTK 721 PV+L L + H+++ K Sbjct: 131 PVKLADLTKLKPHMMKTKLK 150
>Q07783:CHVI_AGRTU Transcriptional regulatory protein chvI - Agrobacterium tumefaciens| Length = 241 Score = 57.8 bits (138), Expect = 2e-07 Identities = 40/124 (32%), Positives = 59/124 (47%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 + VDDD L + L R Y V T A+A+ L Q L I D+ MP MDG Sbjct: 4 IALVDDDRNILTSVSIALEREGYRVETYTDGASAVDGLIARPPQ--LAIFDIKMPRMDGM 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 +LL + + D+PVI L++ E + G+ GA D++ KP L + ++RR + Sbjct: 62 ELLRRLRQKSDIPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRASS 121 Query: 722 NRGS 733 S Sbjct: 122 REAS 125
>A1W0A5:CHEY_CAMJJ Chemotaxis protein cheY homolog - Campylobacter jejuni subsp.| jejuni serotype O:23/36 (strain 81-176) Length = 130 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 4/121 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 M++L VDD T ++++N L R + V A +L +N+D ++I+D +MP+M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED-VKVLITDWNMPEM 59 Query: 533 DGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 +G +L++ V E D+P+IM++ G V+ + G +Y++KP + LK + V Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDV 119 Query: 704 I 706 + Sbjct: 120 L 120
>Q0P9D6:CHEY_CAMJE Chemotaxis protein cheY homolog - Campylobacter jejuni| Length = 130 Score = 57.8 bits (138), Expect = 2e-07 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 4/121 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 M++L VDD T ++++N L R + V A +L +N+D ++I+D +MP+M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED-VKVLITDWNMPEM 59 Query: 533 DGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 +G +L++ V E D+P+IM++ G V+ + G +Y++KP + LK + V Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDV 119 Query: 704 I 706 + Sbjct: 120 L 120
>Q00934:PILR_PSEAE Type 4 fimbriae expression regulatory protein pilR - Pseudomonas| aeruginosa Length = 445 Score = 57.4 bits (137), Expect = 3e-07 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 + L VDD+P ++LE L R + A +L ++ FDL ++D+ +PD G Sbjct: 5 KALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLA--REPFDLCLTDMRLPDGSG 62 Query: 539 FKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 L++ + PV M++A G T ++ + GA D+L KPV L +L+ + +R Sbjct: 63 LDLVQYIQQRHPQTPVAMITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALR 120
>P48027:GACS_PSESY Sensor protein gacS - Pseudomonas syringae pv. syringae| Length = 907 Score = 57.4 bits (137), Expect = 3e-07 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 9/128 (7%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 RVL VDD+P L +++ LL V A+ +++ + FDLV+ DV MP MDG Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQ--EAFDLVLMDVQMPGMDG 715 Query: 539 FKLLELVGL------EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI--- 691 + E + + LP++ L+A+ + G DYL KP+ QL + Sbjct: 716 RQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQLAQVVLK 775 Query: 692 WQHVIRRN 715 W + RN Sbjct: 776 WTGLALRN 783
>P69228:BAER_ECOLI Transcriptional regulatory protein baeR - Escherichia coli| Length = 240 Score = 57.4 bits (137), Expect = 3e-07 Identities = 36/130 (27%), Positives = 62/130 (47%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+P ++L + LR Y T L +R+ DL++ D+ +P DG Sbjct: 12 RILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPP--DLILLDLMLPGTDG 69 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L + D+P++M++A E + G+ GA DY+ KP ++ + ++RR Sbjct: 70 LTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCK 129 Query: 719 KNRGSDNDDA 748 R DA Sbjct: 130 PQRELQQQDA 139
>P69229:BAER_ECOL6 Transcriptional regulatory protein baeR - Escherichia coli O6| Length = 240 Score = 57.4 bits (137), Expect = 3e-07 Identities = 36/130 (27%), Positives = 62/130 (47%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+P ++L + LR Y T L +R+ DL++ D+ +P DG Sbjct: 12 RILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPP--DLILLDLMLPGTDG 69 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 L + D+P++M++A E + G+ GA DY+ KP ++ + ++RR Sbjct: 70 LTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCK 129 Query: 719 KNRGSDNDDA 748 R DA Sbjct: 130 PQRELQQQDA 139
>Q7A0U4:SRRA_STAAW Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MW2) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q9L524:SRRA_STAAU Transcriptional regulatory protein srrA - Staphylococcus aureus| Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q6G972:SRRA_STAAS Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MSSA476) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q6GGK6:SRRA_STAAR Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MRSA252) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q7A5H6:SRRA_STAAN Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain N315) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q7A2R6:SRRA_STAAM Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain Mu50 / ATCC 700699) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q5HFT0:SRRA_STAAC Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain COL) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q2FY79:SRRA_STAA8 Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain NCTC 8325) Length = 241 Score = 57.0 bits (136), Expect = 4e-07 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDY--HVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +L VDD+ ++L+ L R + H + GQ A L M ++ + ++ D+ +P+MD Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAM----ENNYACILLDLMLPEMD 60 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++ + P+IML+A GE ++G GA DY++KP ++ + ++RR Sbjct: 61 GIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q57QC3:PHOP_SALCH Virulence transcriptional regulatory protein phoP - Salmonella| choleraesuis Length = 224 Score = 57.0 bits (136), Expect = 4e-07 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ L+ + V T A A L E+ D+ I D+ +PD D Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDATEDAREADYYLNEHLP--DIAIVDLGLPDED 59 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LPV++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 60 GLSLIRRWRSSDISLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119 Query: 713 NT 718 N+ Sbjct: 120 NS 121
>Q2SFY4:CHEB2_HAHCH Chemotaxis response regulator protein-glutamate methylesterase 2 -| Hahella chejuensis (strain KCTC 2396) Length = 368 Score = 56.6 bits (135), Expect = 5e-07 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATAL-RMLRENKDQFDLVISDVHMPDM 532 ++VL VDD +VL+ +L R D ++ G AA + LR +K D+++ DV MP M Sbjct: 5 IKVLLVDDSAVVRQVLQQVLER-DKNIEVIGAAADPIFAQLRMSKQWPDVIVLDVEMPRM 63 Query: 533 DGFKLLELVGLEMDLPVIMLS--ANGETQTVMKGITHGACDYLLKP 664 DG L+ + E PV+M S + QT MK + GA + KP Sbjct: 64 DGITFLKKLMAERPTPVVMCSTLTSKGAQTSMKALAAGAVAVVAKP 109
>Q49XM7:ARLR_STAS1 Response regulator arlR - Staphylococcus saprophyticus subsp.| saprophyticus (strain ATCC 15305 / DSM 20229) Length = 220 Score = 56.6 bits (135), Expect = 5e-07 Identities = 29/118 (24%), Positives = 62/118 (52%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L V+D+ + +E L +Y V L N +DL++ D+ +P+++G Sbjct: 3 KILIVEDEQNLARFIELELEHENYDVDIEYDGKPGLEKALSNT--YDLILLDLMLPNING 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + P+I+++A +T + G+ +GA DY++KP +E+L + ++RR Sbjct: 61 LEICRQIRQNQTTPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAMLRR 118
>P51586:YSO1_PLEBO Uncharacterized 14.6 kDa protein in sodA1 3'region - Plectonema| boryanum Length = 131 Score = 56.2 bits (134), Expect = 6e-07 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 5/122 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M +L VDDDP +L +L VT A AL +L + L++SDV MP+MD Sbjct: 7 MDILVVDDDPDTRDLLRFMLEDEGAIVTVAPNAKEALSLLERELPK--LLVSDVAMPEMD 64 Query: 536 GFKLL----ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPV-RLEQLKTIWQH 700 GF+L+ EL E LP I L+A + + G DYL KPV LE ++ + Q+ Sbjct: 65 GFELIGRVRELPKGE-TLPAIALTAYAREEDRQAALRSGFNDYLTKPVDPLELIRLVQQY 123 Query: 701 VI 706 + Sbjct: 124 CL 125
>P0AFB8:NTRC_ECOLI Nitrogen regulation protein NR(I) - Escherichia coli| Length = 469 Score = 56.2 bits (134), Expect = 6e-07 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V VDDD + VLE L TT A L L D+++SD+ MP MDG Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTP--DVLLSDIRMPGMDGL 63 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 LL+ + LPVI+++A+ + + GA DYL KP +++ + + I Sbjct: 64 ALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119
>P0AFB9:NTRC_ECO57 Nitrogen regulation protein NR(I) - Escherichia coli O157:H7| Length = 469 Score = 56.2 bits (134), Expect = 6e-07 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V VDDD + VLE L TT A L L D+++SD+ MP MDG Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTP--DVLLSDIRMPGMDGL 63 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 LL+ + LPVI+++A+ + + GA DYL KP +++ + + I Sbjct: 64 ALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119
>O05251:MALR_BACSU Transcriptional regulatory protein malR - Bacillus subtilis| Length = 235 Score = 56.2 bits (134), Expect = 6e-07 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTT--TGQAATALRMLRENKDQFDLVISDVHMPD 529 + VL V+DDP ++ + L + D +AL +L E+ DL++ D++MP Sbjct: 2 INVLIVEDDPMVGELNKRYLSQIDGFQLKGIASSFQSALHILGEH--HIDLILLDIYMPG 59 Query: 530 MDGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 688 +G +LL EL + VI++SA E + K + +GA DYL+KP E+ +T Sbjct: 60 KNGLELLTELRAQNEAVDVIVISAASELDVIKKTLRYGAVDYLIKPFEFERFQT 113
>P76340:YEDW_ECOLI Probable transcriptional regulatory protein yedW - Escherichia coli| Length = 223 Score = 55.8 bits (133), Expect = 8e-07 Identities = 30/109 (27%), Positives = 54/109 (49%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L ++D+ + + L Y + L + KD + L+I D+ +P MD Sbjct: 1 MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLAL--KDDYALIILDIMLPGMD 58 Query: 536 GFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G+++L+ + PVI L+A ++G+ GA DYL+KP +L Sbjct: 59 GWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSEL 107
>P22104:TCTD_SALTY Transcriptional regulatory protein tctD - Salmonella typhimurium| Length = 224 Score = 55.8 bits (133), Expect = 8e-07 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L +D+ LE L + + V A +L + + + L + D++MP MD Sbjct: 1 MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLL--HSEMYALAVLDINMPGMD 58 Query: 536 GFKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++++ + LPV++L+A +KG+ GA DYL KP LE+L + ++RR Sbjct: 59 GLEVVQRLRKRGQTLPVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALLRR 118 Query: 713 N 715 + Sbjct: 119 S 119
>P38889:SKN7_YEAST Transcription factor SKN7 - Saccharomyces cerevisiae (Baker's| yeast) Length = 622 Score = 55.8 bits (133), Expect = 8e-07 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Frame = +2 Query: 353 GMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 G VL V+DD +++ LR+ V +A+ L K ++DLV+ D+ MP++ Sbjct: 376 GFHVLLVEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLE--KYRYDLVLMDIVMPNL 433 Query: 533 DGFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 DG +V + + P+I ++ N Q ++ + HG D L KP + L +I Sbjct: 434 DGATATSIVRSFDNETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSI 487
>P23620:PHOB_PSEAE Phosphate regulon transcriptional regulatory protein phoB -| Pseudomonas aeruginosa Length = 229 Score = 55.8 bits (133), Expect = 8e-07 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 VG +L VDD+ +++ L Y A ++ + K DL++ D +P Sbjct: 2 VGKTILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVDRKP--DLILLDWMLPG 59 Query: 530 MDGFKL---LELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQH 700 G +L L+ L +D+P+IML+A GE ++G+ GA DY+ KP +L + Sbjct: 60 TSGIELARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKA 119 Query: 701 VIRR 712 V+RR Sbjct: 120 VLRR 123
>P0AA21:OMPR_SHIFL Transcriptional regulatory protein ompR - Shigella flexneri| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>P0AA19:OMPR_SALTY Transcriptional regulatory protein ompR - Salmonella typhimurium| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>P0AA20:OMPR_SALTI Transcriptional regulatory protein ompR - Salmonella typhi| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>P0AA16:OMPR_ECOLI Transcriptional regulatory protein ompR - Escherichia coli| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>P0AA17:OMPR_ECOL6 Transcriptional regulatory protein ompR - Escherichia coli O6| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>P0AA18:OMPR_ECO57 Transcriptional regulatory protein ompR - Escherichia coli O157:H7| Length = 239 Score = 55.5 bits (132), Expect = 1e-06 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDDD +LE L + V + A R+L ++ F L++ D+ +P DG Sbjct: 6 KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL--TRESFHLMVLDLMLPGEDG 63 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 + + + + +P+IM++A GE + G+ GA DY+ KP +L + V+RR Sbjct: 64 LSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRR 122
>Q02540:COPR_PSESM Transcriptional activator protein copR - Pseudomonas syringae pv.| tomato Length = 227 Score = 55.5 bits (132), Expect = 1e-06 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 3/124 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHV--TTTGQAATALRMLRENKDQFDLVISDVHMPD 529 M++L +D+P L+ LR ++V TG A + + +DL+I DV MP Sbjct: 1 MKLLVAEDEPKTGIYLQQGLREAGFNVDRVVTGTDAVDQAL----NEAYDLLILDVMMPG 56 Query: 530 MDGFKLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 +DG++++ L +PV+ L+A +KG+ GA DYL+KP L +L + ++ Sbjct: 57 LDGWEVIRRLRTAGQPVPVLFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLL 116 Query: 707 RRNT 718 RR + Sbjct: 117 RRGS 120
>P0AE69:CHEY_SHIFL Chemotaxis protein cheY - Shigella flexneri| Length = 129 Score = 55.5 bits (132), Expect = 1e-06 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ + VISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--YGFVISDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P0AE67:CHEY_ECOLI Chemotaxis protein cheY - Escherichia coli| Length = 129 Score = 55.5 bits (132), Expect = 1e-06 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ + VISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--YGFVISDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P0AE68:CHEY_ECO57 Chemotaxis protein cheY - Escherichia coli O157:H7| Length = 129 Score = 55.5 bits (132), Expect = 1e-06 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ + VISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--YGFVISDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>Q8CP82:ARLR_STAES Response regulator arlR - Staphylococcus epidermidis (strain ATCC| 12228) Length = 219 Score = 55.5 bits (132), Expect = 1e-06 Identities = 31/117 (26%), Positives = 61/117 (52%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L V+D+ + +E L +Y V L + +DL I D+ +P+++G Sbjct: 4 ILIVEDEQNLARFIELELTHENYTVDIENDGKVGLD--KALSKPYDLYILDLMLPNINGL 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A ET + G+ +GA DY++KP +E+L + V+RR Sbjct: 62 EICRQIRQKTTTPIIIITAKSETYDKVAGLDYGADDYIVKPFDIEELLARIRAVLRR 118
>Q5HPC3:ARLR_STAEQ Response regulator arlR - Staphylococcus epidermidis (strain ATCC| 35984 / RP62A) Length = 219 Score = 55.5 bits (132), Expect = 1e-06 Identities = 31/117 (26%), Positives = 61/117 (52%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L V+D+ + +E L +Y V L + +DL I D+ +P+++G Sbjct: 4 ILIVEDEQNLARFIELELTHENYTVDIENDGKAGLD--KALSKPYDLYILDLMLPNINGL 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+I+++A ET + G+ +GA DY++KP +E+L + V+RR Sbjct: 62 EICRQIRQKTTTPIIIITAKSETYDKVAGLDYGADDYIVKPFDIEELLARIRAVLRR 118
>Q1XDE4:YCF29_PORYE Probable transcriptional regulator ycf29 - Porphyra yezoensis| Length = 222 Score = 55.1 bits (131), Expect = 1e-06 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 +++ V++D K ++ L ++V AL + + FDL+ISD+ MP ++G Sbjct: 4 KLMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNLAYQYN--FDLIISDIMMPLVNG 61 Query: 539 FKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 ++LL + L PVI L+A G T+ +KG G YL KP +L +I ++I Sbjct: 62 YELLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPFDPNELLSIINNLIA 121 Query: 710 RNTKNRGSDNDDAS 751 R+ S + A+ Sbjct: 122 RDVLKEASLQNSAT 135
>P42244:YCBL_BACSU Uncharacterized sensory transduction protein ycbL - Bacillus| subtilis Length = 226 Score = 55.1 bits (131), Expect = 1e-06 Identities = 29/119 (24%), Positives = 64/119 (53%) Frame = +2 Query: 365 LAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFK 544 + V+DD + +++++ L + + + +R+ ++ +DLV+ D+ +P ++G Sbjct: 1 MLVEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQQGS--YDLVLLDIMLPKLNGMD 58 Query: 545 LLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 L+++ + ++PV+M+SA G+ GA DY+ KP + +L + IRR T+ Sbjct: 59 FLKIIREKSNIPVLMISAKDGDVDKALGLGFGADDYIAKPFSMIELTARVKAAIRRATQ 117
>P14146:PHOP_SALTY Virulence transcriptional regulatory protein phoP - Salmonella| typhimurium Length = 224 Score = 55.1 bits (131), Expect = 1e-06 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ L+ + V A A L E+ D+ I D+ +PD D Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLP--DIAIVDLGLPDED 59 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LPV++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 60 GLSLIRRWRSSDVSLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119 Query: 713 NT 718 N+ Sbjct: 120 NS 121
>Q8Z7H2:PHOP_SALTI Virulence transcriptional regulatory protein phoP - Salmonella| typhi Length = 224 Score = 55.1 bits (131), Expect = 1e-06 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ L+ + V A A L E+ D+ I D+ +PD D Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLP--DIAIVDLGLPDED 59 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LPV++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 60 GLSLIRRWRSSDVSLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119 Query: 713 NT 718 N+ Sbjct: 120 NS 121
>Q5PMJ1:PHOP_SALPA Virulence transcriptional regulatory protein phoP - Salmonella| paratyphi-a Length = 224 Score = 55.1 bits (131), Expect = 1e-06 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ L+ + V A A L E+ D+ I D+ +PD D Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLP--DIAIVDLGLPDED 59 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LPV++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 60 GLSLIRRWRSSDVSLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119 Query: 713 NT 718 N+ Sbjct: 120 NS 121
>Q9ZM64:CHEY_HELPJ Chemotaxis protein cheY homolog - Helicobacter pylori J99| (Campylobacter pylori J99) Length = 124 Score = 55.1 bits (131), Expect = 1e-06 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 M++L VDD T ++++N L R Y V A L N D ++I+D +MP+M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADT-KVLITDWNMPEM 59 Query: 533 DGFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 +G L++ V + ++P+IM++ G V+ + G +Y++KP + LK + V Sbjct: 60 NGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVV 119 Query: 704 IRRN 715 + N Sbjct: 120 LGTN 123
>Q9FAD7:CHEY_ENTCL Chemotaxis protein cheY - Enterobacter cloacae| Length = 129 Score = 55.1 bits (131), Expect = 1e-06 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ F VISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--FGFVISDWNMPNM 63 Query: 533 DGFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + + +PV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>Q8FGP6:CHEY_ECOL6 Chemotaxis protein cheY - Escherichia coli O6| Length = 129 Score = 55.1 bits (131), Expect = 1e-06 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ + VISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQAGG--YGFVISDWNMPNM 63 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + G LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>Q9ZHD3:SILR_SALTY Probable transcriptional regulatory protein silR - Salmonella| typhimurium Length = 228 Score = 54.7 bits (130), Expect = 2e-06 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+DD + L L + V T + ++DLVI D+ +PD++ Sbjct: 1 MKILIVEDDIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTA--EYDLVILDIMLPDVN 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G+ ++ ++ +PV++L+A G + +KG+ GA DYL+KP +L + ++RR Sbjct: 59 GWDIIRMLRSAGKGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>P39486:DCTR_BACME Probable C4-dicarboxylate response regulator dctR - Bacillus| megaterium Length = 228 Score = 54.7 bits (130), Expect = 2e-06 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 4/112 (3%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD-QFDLVISDVHMPDMDG 538 VL ++DDP +V + + + T A+ L ++ K Q DL I D++MP DG Sbjct: 8 VLLIEDDPMVQEVNRQFIEQVE-GFTVIAAASNGLEGVQLIKQHQPDLTIIDMYMPSQDG 66 Query: 539 FKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 L+ + G + D VI ++A + +TV K + +GA DY++KP + E++K Sbjct: 67 LTTLQQIRANGYKTD--VIAVTAASDIETVRKVLQYGAVDYIMKPFKFERMK 116
>P0A2D5:CHEY_SALTY Chemotaxis protein cheY - Salmonella typhimurium| Length = 129 Score = 54.7 bits (130), Expect = 2e-06 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ F +ISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--FGFIISDWNMPNM 63 Query: 533 DGFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + + LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P0A2D6:CHEY_SALTI Chemotaxis protein cheY - Salmonella typhi| Length = 129 Score = 54.7 bits (130), Expect = 2e-06 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++ L VDD T +++ NLL+ ++ V AL L+ F +ISD +MP+M Sbjct: 6 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG--FGFIISDWNMPNM 63 Query: 533 DGFKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 DG +LL+ + + LPV+M++A + + ++ GA Y++KP Sbjct: 64 DGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P71403:CHEY_HELPY Chemotaxis protein cheY homolog - Helicobacter pylori| (Campylobacter pylori) Length = 124 Score = 54.7 bits (130), Expect = 2e-06 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYH-VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 M++L VDD T ++++N L R Y V A L N D ++I+D +MP+M Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADT-KVLITDWNMPEM 59 Query: 533 DGFKLLELVGLEM---DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 703 +G L++ V + ++P+IM++ G V+ + G +Y++KP + LK + V Sbjct: 60 NGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVV 119 Query: 704 IRRN 715 + N Sbjct: 120 LGTN 123
>Q2ILG8:CHEB6_ANADE Chemotaxis response regulator protein-glutamate methylesterase 6 -| Anaeromyxobacter dehalogenans (strain 2CP-C) Length = 350 Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLREN-KDQFDLVISDVHMPDM 532 +RVL VDD L LL D + G AA + L E + + D+V+ D+ MP M Sbjct: 10 LRVLVVDDSAASRDELVRLLHGGD-GLVVAGTAADGEQGLAEALRLEPDVVVLDLQMPRM 68 Query: 533 DGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVR 670 DGF L L+ PV++LS+ V K + GA D++ +P R Sbjct: 69 DGFTFLRLLMARRPTPVVVLSSRSRRADVFKALELGALDFVARPER 114
>P35163:RESD_BACSU Transcriptional regulatory protein resD - Bacillus subtilis| Length = 240 Score = 54.3 bits (129), Expect = 2e-06 Identities = 32/118 (27%), Positives = 59/118 (50%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ ++L L R +Y + A+ E +DL++ D+ MP DG Sbjct: 8 KILVVDDEARIRRLLRMYLERENYAIDEAENGDEAIAKGLEAN--YDLILLDLMMPGTDG 65 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++ + + P+IML+A GE ++G G DY++KP ++ + ++RR Sbjct: 66 IEVCRQIREKKATPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRR 123
>Q9A5I5:PLED_CAUCR Response regulator pleD - Caulobacter crescentus (Caulobacter| vibrioides) Length = 454 Score = 54.3 bits (129), Expect = 2e-06 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD +++LE L Y V+T TAL M +D D+++ DV MP MDG Sbjct: 4 RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAA--RDLPDIILLDVMMPGMDG 61 Query: 539 FKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKPV 667 F + + + +PV++++A ++G+ GA D+L KP+ Sbjct: 62 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107
>Q56312:CHEY_THEMA Chemotaxis protein cheY - Thermotoga maritima| Length = 120 Score = 54.3 bits (129), Expect = 2e-06 Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 2/107 (1%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD-QFDLVISDVHMP 526 +G RVL VDD +L++++ + Y V G+A + + K+ + D+V D+ MP Sbjct: 1 MGKRVLIVDDAAFMRMMLKDIITKAGYEV--AGEATNGREAVEKYKELKPDIVTMDITMP 58 Query: 527 DMDGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKP 664 +M+G + E++ ++ + +I+ SA G+ V++ I GA D+++KP Sbjct: 59 EMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKP 105
>Q9KU36:Y693_VIBCH Uncharacterized response regulatory protein VC_0693 - Vibrio| cholerae Length = 237 Score = 53.9 bits (128), Expect = 3e-06 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRE-NKDQFDLVISDVHMPDM 532 + L +DD+ + L LL + GQA+ A+ L++ N+ + D+V D+ MP + Sbjct: 2 LSALLIDDERFAREELAELLAESG-QIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQI 60 Query: 533 DGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G +LL ++ E V+ ++A Q ++ A DYLLKPV E+L Q ++R+ Sbjct: 61 SGIELLSMLDPETMPEVVFVTAYD--QYALQAFEDNAFDYLLKPVDTERLAKTVQRLLRQ 118 Query: 713 NTKN 724 + K+ Sbjct: 119 HKKS 122
>P45337:QSEB_HAEIN Transcriptional regulatory protein qseB - Haemophilus influenzae| Length = 221 Score = 53.9 bits (128), Expect = 3e-06 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L ++DD L+ L + + V T + L +D V+ D+ +P +D Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAAL--TSAPYDAVVLDLTLPKLD 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G ++L+ D+PV++L+A +KG+ GA DYL KP L ++ Q +IRR Sbjct: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118
>Q83RR0:PHOP_SHIFL Virulence transcriptional regulatory protein phoP - Shigella| flexneri Length = 223 Score = 53.9 bits (128), Expect = 3e-06 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ ++ + V A A L E+ D+ I D+ +PD D Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLP--DIAIVDLGLPDED 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LP+++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 59 GLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 Query: 713 NT 718 N+ Sbjct: 119 NS 120
>Q8CXZ9:PHOP_ECOL6 Transcriptional regulatory protein phoP - Escherichia coli O6| Length = 223 Score = 53.9 bits (128), Expect = 3e-06 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ ++ + V A A L E+ D+ I D+ +PD D Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLP--DIAIVDLGLPDED 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LP+++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 59 GLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 Query: 713 NT 718 N+ Sbjct: 119 NS 120
>Q8X738:PHOP_ECO57 Transcriptional regulatory protein phoP - Escherichia coli O157:H7| Length = 223 Score = 53.9 bits (128), Expect = 3e-06 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ ++ + V A A L E+ D+ I D+ +PD D Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLP--DIAIVDLGLPDED 58 Query: 536 GFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LP+++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 59 GLSLICRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 Query: 713 NT 718 N+ Sbjct: 119 NS 120
>Q9FPR6:ARR17_ARATH Two-component response regulator ARR17 - Arabidopsis thaliana| (Mouse-ear cress) Length = 153 Score = 53.9 bits (128), Expect = 3e-06 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLR----------ENKDQFDLV 505 + VLAVDD+ K++E +L+ VTT AL L N + +L+ Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79 Query: 506 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLE 676 I+D MP M GF+LL+ V +L PV++LS+ + K + GA ++ KP++L Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139 Query: 677 QLKTIWQHVI 706 ++ + H++ Sbjct: 140 DVEKLKCHLL 149
>P23836:PHOP_ECOLI Transcriptional regulatory protein phoP - Escherichia coli| Length = 223 Score = 53.5 bits (127), Expect = 4e-06 Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ L+ ++ + V A A L E+ D+ I D+ +PD D Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIP--DIAIVDLGLPDED 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L+ ++ LP+++L+A Q ++ ++ GA DY+ KP +E++ Q ++RR Sbjct: 59 GLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 Query: 713 NT 718 N+ Sbjct: 119 NS 120
>P41789:NTRC_SALTY Nitrogen regulation protein NR(I) - Salmonella typhimurium| Length = 469 Score = 53.5 bits (127), Expect = 4e-06 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V VDDD + VLE L TT L L D+++SD+ MP MDG Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALASKTP--DVLLSDIRMPGMDGL 63 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 706 LL+ + LPVI+++A+ + + GA DYL KP +++ + + I Sbjct: 64 ALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119
>P96686:YDFI_BACSU Sensory transduction protein ydfI - Bacillus subtilis| Length = 213 Score = 53.1 bits (126), Expect = 5e-06 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 3/122 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAAT---ALRMLRENKDQFDLVISDVHMPD 529 +VL VDD + L+ L+ D + T G+A A+R+ E + D+++ D++MP+ Sbjct: 3 KVLIVDDHLVVREGLKLLIETNDQY-TIIGEAENGKVAVRLADELEP--DIILMDLYMPE 59 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 M G + ++ + + D P+I+L+ E +++GI GA YLLK E L IR Sbjct: 60 MSGLEAIKQIKEKHDTPIIILTTYNEDHLMIEGIELGAKGYLLKDTSSETLFHTMDAAIR 119 Query: 710 RN 715 N Sbjct: 120 GN 121
>Q39T95:CHEB2_GEOMG Chemotaxis response regulator protein-glutamate methylesterase 2 -| Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) Length = 360 Score = 53.1 bits (126), Expect = 5e-06 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD-QFDLVISDVHMPDM 532 +RV+ +DD + + +L V G A +R+ D + DLV D+ MP M Sbjct: 4 IRVVVIDDSAFNRRAIIKMLESMP-EVVVAGYANDGEEGIRKVIDLKPDLVTLDLEMPKM 62 Query: 533 DGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVR--LEQLKTI 691 DGF LL ++ PVI++SA + + V K + GA D++ KP + E+L TI Sbjct: 63 DGFTLLRIIMGYCPTPVIVISAKSDDEKVFKALELGAVDFVAKPSQGISEELLTI 117
>Q88RJ6:ALGB_PSEPK Alginate biosynthesis transcriptional regulatory protein algB -| Pseudomonas putida (strain KT2440) Length = 448 Score = 53.1 bits (126), Expect = 5e-06 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD+ L+ L Y V T AA A +L+ + FDL D+ + + +G Sbjct: 10 RILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQ--RQVFDLCFLDLRLGEDNG 67 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 +L + ++ + V++++A+ T + I GA DYL+KP +QL+ Sbjct: 68 LDVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLR 117
>Q06239:VANR_ENTFC Regulatory protein vanR - Enterococcus faecium (Streptococcus| faecium) Length = 231 Score = 52.8 bits (125), Expect = 7e-06 Identities = 36/124 (29%), Positives = 60/124 (48%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 ++L VDD+ ++E L+ +Y V A AL + +K + DL I D+ +P G Sbjct: 4 KILIVDDEHEIADLVELYLKNENYTVFKYYTAKEALECI--DKSEIDLAILDIMLPGTSG 61 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 + + + + P+IML+ + G+T GA DY+ KP R +L + +RR Sbjct: 62 LTICQKIRDKHTYPIIMLTGKDTEVDKITGLTIGADDYITKPFRPLELIARVKAQLRRYK 121 Query: 719 KNRG 730 K G Sbjct: 122 KFSG 125
>Q47744:VANR_ENTFA Regulatory protein vanRB - Enterococcus faecalis (Streptococcus| faecalis) Length = 220 Score = 52.8 bits (125), Expect = 7e-06 Identities = 32/122 (26%), Positives = 58/122 (47%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 + +R+L V+DD + L Y V A EN + LVI D+ +P Sbjct: 1 MSIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEAHTKFYENT--YQLVILDIMLPG 58 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 M+G +LL + D P++M++A + + ++ A DY+ KP ++ L + ++R Sbjct: 59 MNGHELLREFRAQNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLR 118 Query: 710 RN 715 R+ Sbjct: 119 RS 120
>P43501:PILH_PSEAE Protein pilH - Pseudomonas aeruginosa| Length = 121 Score = 52.8 bits (125), Expect = 7e-06 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD PT + L +L + + V + + R+ K D+V+ D+ MP ++G Sbjct: 3 RILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKP--DVVLMDIVMPGLNG 60 Query: 539 FKLLELVGLEMD---LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ-LKTI 691 F+ + + + +PVI+++ + + G GA DYL KPV E LKTI Sbjct: 61 FQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTI 115
>P24072:CHEY_BACSU Chemotaxis protein cheY homolog - Bacillus subtilis| Length = 120 Score = 52.8 bits (125), Expect = 7e-06 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQ-AATALRMLRENKDQFDLVISDVHMPDMD 535 R+L VDD +++++L + + V + A A+ +E+ DLV D+ MP+MD Sbjct: 4 RILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKEHSP--DLVTMDITMPEMD 61 Query: 536 GFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G L E+ ++ +IM SA G+ V+ I GA D+++KP + +++ Sbjct: 62 GITALKEIKQIDAQARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRV 111
>Q9UYF3:CHEB_PYRAB Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus abyssi Length = 368 Score = 52.8 bits (125), Expect = 7e-06 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 3/106 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRE-NKDQFDLVISDVHMPDM 532 +RVL VDD KVL++++ D + G+A + + K + D+V DV MP M Sbjct: 8 IRVLVVDDSAFMRKVLKDIINS-DPELEVCGEARDGIEAIEMVQKCRPDVVTLDVEMPRM 66 Query: 533 DGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 +G L ++ + +PVIM+SA + + +K + +GA D++ KP Sbjct: 67 NGLDALRVIMKKYPVPVIMISALTQEGAEATIKALEYGAIDFIPKP 112
>P30843:BASR_ECOLI Transcriptional regulatory protein basR/pmrA - Escherichia coli| Length = 222 Score = 52.8 bits (125), Expect = 7e-06 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+DD L+ L + Y + A A + L + LV+ D+ +PD D Sbjct: 1 MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAG--HYSLVVLDLGLPDED 58 Query: 536 GFKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L + + LPV++L+A + G+ GA DYL+KP LE+L + ++RR Sbjct: 59 GLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRR 118 Query: 713 NTKNRGSD 736 + S+ Sbjct: 119 HNNQGESE 126
>P38684:TORR_ECOLI TorCAD operon transcriptional regulatory protein torR - Escherichia| coli Length = 230 Score = 52.4 bits (124), Expect = 9e-06 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 ++ V+D+P L++ + Y V+ T A LR + +N+ DL++ D+++PD +G Sbjct: 5 IVIVEDEPVTQARLQSYFTQEGYTVSVTASGA-GLREIMQNQS-VDLILLDINLPDENGL 62 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL-----KTIWQHVI 706 L + + +I+++ + + G+ GA DY+ KP+ L +L +W+ + Sbjct: 63 MLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDL 122 Query: 707 RRNTKNRGSDN 739 R + DN Sbjct: 123 ARQAQPHTQDN 133
>Q01473:RCAC_FREDI Protein rcaC - Fremyella diplosiphon (Calothrix PCC 7601)| Length = 651 Score = 52.4 bits (124), Expect = 9e-06 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+DD +KVL L Y V + + ++DL+I D+ +P++D Sbjct: 1 MKILLVEDDDVLIKVLTKNLTTHHYIVDVVKDGE--MGWTYGSTFEYDLIILDIMLPNLD 58 Query: 536 GFKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L + + +P+++L+A ++G+ GA DY++KP +L + ++RR Sbjct: 59 GISLCKRFRAQGYTVPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIELIARIRALLRR 118 Query: 713 NTKN 724 + N Sbjct: 119 GSNN 122 Score = 52.4 bits (124), Expect = 9e-06 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 +V+ +DDD L+ L LL+ + VTT +L+ D ++ DV+MP ++G Sbjct: 527 KVMILDDDQDWLRTLPTLLKPWGFKVTTLADPQQFWTVLQAVTP--DALVLDVNMPQING 584 Query: 539 FKLLELVGLE---MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 F+L +L+ + LPV+ LS + T + G DYL KPV+ +L ++R Sbjct: 585 FELCQLLRSDPHWQRLPVLFLSVLTDPTTQNQAFAVGGDDYLCKPVKGVELA---NRILR 641 Query: 710 RNTKNRGSDN 739 R + R N Sbjct: 642 RLQRVRAWAN 651
>P45605:PHOB_KLEPN Phosphate regulon transcriptional regulatory protein phoB -| Klebsiella pneumoniae Length = 229 Score = 52.4 bits (124), Expect = 9e-06 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ +++ +L + + +A+ L N+ DL++ D +P G Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQL--NEPWPDLILLDWMLPGGSG 61 Query: 539 F---KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 KLL+ + D+PV+ML+A GE + ++G+ GA DY+ KP ++L + V+R Sbjct: 62 LQFIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 710 R 712 R Sbjct: 122 R 122
>P0A4H5:CHEY_LISMO Chemotaxis protein cheY - Listeria monocytogenes| Length = 119 Score = 52.4 bits (124), Expect = 9e-06 Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQ-AATALRMLRENKDQFDLVISDVHMPDM 532 +++L VDD +++N+++ D+ V + A++ E K D+V D+ MP+M Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEM 59 Query: 533 DGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 DG + L +++ + VIM SA G+ V+ I GA D+++KP + +++ Sbjct: 60 DGLEALAQIMAKDPSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>P0A4H6:CHEY_LISIN Chemotaxis protein cheY - Listeria innocua| Length = 119 Score = 52.4 bits (124), Expect = 9e-06 Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQ-AATALRMLRENKDQFDLVISDVHMPDM 532 +++L VDD +++N+++ D+ V + A++ E K D+V D+ MP+M Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEM 59 Query: 533 DGFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 DG + L +++ + VIM SA G+ V+ I GA D+++KP + +++ Sbjct: 60 DGLEALAQIMAKDPSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>Q10WZ6:CHEB_TRIEI Chemotaxis response regulator protein-glutamate methylesterase -| Trichodesmium erythraeum (strain IMS101) Length = 352 Score = 52.4 bits (124), Expect = 9e-06 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDY----HVTTTGQAATALRMLRENKDQFDLVISDVHMP 526 R+L VDD +++ N+L D+ V +GQ A A ++ + N D L+I DV MP Sbjct: 5 RILIVDDSVIVRRIINNILSESDWIEVVGVAPSGQIALA-KIPQVNPD---LIILDVEMP 60 Query: 527 DMDGFKLLELV-GLEMDLPVIMLSANGETQTV--MKGITHGACDYLLKPVRL 673 ++DG + L+ + LPVIM SA + + + +T GA DY+ KP + Sbjct: 61 EIDGLETLKRIRQTYKQLPVIMFSAITQRGAIATLDALTLGANDYITKPANM 112
>P62640:CHEB3_GEOSL Chemotaxis response regulator protein-glutamate methylesterase of| group 3 operon - Geobacter sulfurreducens Length = 371 Score = 52.4 bits (124), Expect = 9e-06 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKD-QFDLVISDVHMPDM 532 +RV+ +DD + + +L V G A +R+ D + DLV D+ MP M Sbjct: 4 IRVVVIDDSAYSRRAITKMLESMP-EVEVIGYATDGEEGIRKIIDLKPDLVTLDLEMPRM 62 Query: 533 DGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVR--LEQLKTIWQHVI 706 DGF LL +V VI++S+ E + V + + GA D++ KP + E++ TI + + Sbjct: 63 DGFTLLRIVMEYSPTAVIVISSRSEDEKVFRALELGAVDFVAKPTKGVSEEILTIREDLH 122 Query: 707 RR 712 R+ Sbjct: 123 RK 124
>Q88AQ2:ALGB_PSESM Alginate biosynthesis transcriptional regulatory protein algB -| Pseudomonas syringae pv. tomato Length = 448 Score = 52.4 bits (124), Expect = 9e-06 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD+ L+ L Y V T AA A +++ + FDL D+ + + +G Sbjct: 10 RILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLMQ--RQVFDLCFLDLRLGEDNG 67 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 +L + ++ + V++++A+ T + I GA DYL+KP +QL+ Sbjct: 68 LDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLR 117
>P52940:SP0A_CLOPA Stage 0 sporulation protein A homolog - Clostridium pasteurianum| Length = 273 Score = 52.0 bits (123), Expect = 1e-05 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%) Frame = +2 Query: 362 VLAVDDDPTCLKVLEN-LLRRCDYHVTTTGQ-AATALRMLRENKDQFDLVISDVHMPDMD 535 VL DD+ +L + LL + D V + AL+++ E K DLVI D+ MP+MD Sbjct: 8 VLIADDNKEFCNILNDYLLNQSDIVVVGIAKDGIEALKLIEEKKP--DLVILDIIMPNMD 65 Query: 536 GFKLLE-LVGLEMD-LP-VIMLSANGETQTVMKGITHGACDYLLKPVRLE 676 G +LE L + +D +P VI+LSA G+ + + IT GA Y++KP ++ Sbjct: 66 GLVVLEKLANINIDPVPNVIVLSAVGQDKITQRAITLGADYYVVKPFDMD 115
>P0A4I0:DLTR_STRA5 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype V Length = 224 Score = 52.0 bits (123), Expect = 1e-05 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L V+D+ + + ++ LL Y V L + +DLV+ D+ +P Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGL--YDLVLLDIMLPKRS 58 Query: 536 GFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ------LKT 688 G +L+ V GLE P+I L+A +T + G+ GA DY+ KP ++ L+T Sbjct: 59 GLSVLKRVREAGLET--PIIFLTAKSQTYDKVNGLDLGADDYITKPFEADELLARIRLRT 116 Query: 689 IWQHVIRRNTKNRGS 733 +IR N G+ Sbjct: 117 RQSSLIRANQLRLGN 131
>P0A4H9:DLTR_STRA3 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype III Length = 224 Score = 52.0 bits (123), Expect = 1e-05 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L V+D+ + + ++ LL Y V L + +DLV+ D+ +P Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGL--YDLVLLDIMLPKRS 58 Query: 536 GFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ------LKT 688 G +L+ V GLE P+I L+A +T + G+ GA DY+ KP ++ L+T Sbjct: 59 GLSVLKRVREAGLET--PIIFLTAKSQTYDKVNGLDLGADDYITKPFEADELLARIRLRT 116 Query: 689 IWQHVIRRNTKNRGS 733 +IR N G+ Sbjct: 117 RQSSLIRANQLRLGN 131
>P36556:BASR_SALTY Transcriptional regulatory protein basR/pmrA - Salmonella| typhimurium Length = 222 Score = 52.0 bits (123), Expect = 1e-05 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+DD L+ L + Y A A L + L++ D+ +PD D Sbjct: 1 MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESG--HYSLMVLDLGLPDED 58 Query: 536 GFKLLELVGLEM-DLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G L + + LPV++L+A+ + G+ GA DYL+KP LE+L + ++RR Sbjct: 59 GLHFLTRIRQKKYTLPVLILTAHDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRR 118 Query: 713 NTKNRGSD 736 + S+ Sbjct: 119 HNNQGESE 126
>P29369:AGMR_PSEAE Glycerol metabolism activator - Pseudomonas aeruginosa| Length = 221 Score = 52.0 bits (123), Expect = 1e-05 Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRC--DYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++L DD P + + N++ V T +AL + +E+ D DL++ D++MP M Sbjct: 3 KILIADDHPLFREAIHNVIADGFPGSEVMETADLDSALGLTQEH-DDLDLILLDLNMPGM 61 Query: 533 DGFK-LLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 G L+ L +PV+++SA + Q V++ IT+GA ++ K Q+ + ++ Sbjct: 62 HGLNGLMNLRNEAPTIPVVIVSAEQDKQVVLQAITYGAVGFITKSSPRAQMTEAIEQILN 121 Query: 710 RN 715 N Sbjct: 122 GN 123
>Q70FH0:PMRA_PECCC Transcriptional regulatory protein pmrA - Pectobacterium| carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora) Length = 222 Score = 51.6 bits (122), Expect = 2e-05 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+DD + L L Y G A A ++ + LVI D+ +PD D Sbjct: 1 MKLLIVEDDKLLQEGLLLALSHEGYACDCAGTAKEADALI--GSAHYSLVILDLGLPDDD 58 Query: 536 GFKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G LL PV++L+A + + G+ GA DYL KP L +L+ + +IRR Sbjct: 59 GLALLSRWRKNNYQHPVLILTARDKVDDRVSGLDVGADDYLAKPFALTELQARVRALIRR 118 Query: 713 NTKNRGSDN 739 N+GS N Sbjct: 119 ---NQGSSN 124
>P03029:NTRC_KLEPN Nitrogen assimilation regulatory protein - Klebsiella pneumoniae| Length = 469 Score = 51.6 bits (122), Expect = 2e-05 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +2 Query: 371 VDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGFKLL 550 VDDD + VLE L TT L L D+++SD+ MP MDG LL Sbjct: 9 VDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKTP--DVLLSDIRMPGMDGLALL 66 Query: 551 ELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQ 679 + + LPVI+++A+ + + GA DYL KP +++ Sbjct: 67 KQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE 110
>P15940:NODW_BRAJA Nodulation protein W - Bradyrhizobium japonicum| Length = 227 Score = 51.6 bits (122), Expect = 2e-05 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 V V+DD + + L NL R V G A L+ D ++ DV +P + G Sbjct: 22 VFVVEDDISMRRSLTNLFRSVGLEVVAFGSAREMLQSTMP--DVTSCLVLDVRLPGLSGL 79 Query: 542 KL-LELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNT 718 EL L + +P+I ++ +G+ ++ + GA D+L KP R ++L R+ Sbjct: 80 DYQTELARLNIHIPIIFITGHGDIPMTVRAMKGGAVDFLSKPFRDQELLDAVVAATERDR 139 Query: 719 KNR 727 K R Sbjct: 140 KRR 142
>P23221:FIXJ_BRAJA Transcriptional regulatory protein fixJ - Bradyrhizobium japonicum| Length = 205 Score = 51.6 bits (122), Expect = 2e-05 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 + +DDD L LL + VT A L L F V+SDV MP +DG Sbjct: 7 IYVIDDDAAMRDSLNFLLDSAGFGVTLFDDAQAFLDALPGLS--FGCVVSDVRMPGLDGI 64 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 +LL+ + + P+++++ +G+ ++ + GA D+L KP ++L + + IR+ Sbjct: 65 ELLKRMKAQQSPFPILIMTGHGDVPLAVEAMKLGAVDFLEKPFEDDRLTAMIESAIRQ 122
>P96126:CHEY_TREPA Chemotaxis protein cheY - Treponema pallidum| Length = 144 Score = 51.6 bits (122), Expect = 2e-05 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 2/105 (1%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTG-QAATALRMLRENKDQFDLVISDVHMPDMD 535 RVL VDD K + +L Y V T + + DLV D+ MP MD Sbjct: 26 RVLVVDDSMFVSKQIGQILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMD 85 Query: 536 GFKLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPV 667 G LE ++ + + V+++SA G+ + V K + GA +Y++KP+ Sbjct: 86 GITALEKILEFDKNAKVVIISALGKEELVKKALLLGAKNYIVKPL 130
>Q2KCH7:CHEY_RHIEC Probable chemotaxis protein cheY - Rhizobium etli (strain CFN 42 /| ATCC 51251) Length = 129 Score = 51.6 bits (122), Expect = 2e-05 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 ++VL VDD T +L + L + + +T+ G ++++ E LVISD +MP M Sbjct: 7 IKVLIVDDQVTSRLLLSDALTQLGFKQITSAGDGEQGMKIMTEQPHH--LVISDFNMPKM 64 Query: 533 DGFKLLELVGLEMD---LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 DG L+ V + I+L+A G+ V + GA + L KP +E++K Sbjct: 65 DGIGFLQAVRTNPNTKKAAFIILTAQGDRALVQRAAQLGANNVLAKPFTIEKMK 118
>O29221:CHEB_ARCFU Chemotaxis response regulator protein-glutamate methylesterase -| Archaeoglobus fulgidus Length = 349 Score = 51.6 bits (122), Expect = 2e-05 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL VDD + ++L + V T + + + K + D++ D++MP+MD Sbjct: 1 MRVLVVDDSALVRMAVTDILTKAGIEVVDTAKNGREA-VEKALKLKPDVITLDINMPEMD 59 Query: 536 GFKLLELVGLEMDLPVIMLSA---NGETQTVMKGITHGACDYLLKP-VRLEQLKTIWQHV 703 G L+L+ + PV+MLS+ G +T ++ + GA D++ KP L L ++ Q + Sbjct: 60 GLTALKLIMEKQPTPVVMLSSLTKEGARET-LEALKIGAVDFVTKPDGALVDLSSVAQEL 118 Query: 704 IRR 712 +R+ Sbjct: 119 VRK 121
>Q2INJ8:CHEB1_ANADE Chemotaxis response regulator protein-glutamate methylesterase 1 -| Anaeromyxobacter dehalogenans (strain 2CP-C) Length = 349 Score = 51.6 bits (122), Expect = 2e-05 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD L +L R V T A+ +R + D ++ D+ MP MDG Sbjct: 4 RILVVDDSAVVRMALSQILGRAGLEVETAIDPLVAMDKMRRARP--DAIVLDIEMPRMDG 61 Query: 539 FKLLELVGLEMDLPVIMLS--ANGETQTVMKGITHGACDYLLKP 664 L+ V + +PV++ S A ++ + + HGA D + KP Sbjct: 62 LTFLDRVMAQDPVPVVVCSGLAGPGSEVALHALEHGAVDVIEKP 105
>Q9K621:BCER_BACHD Sensory transduction protein bceR - Bacillus halodurans| Length = 231 Score = 51.6 bits (122), Expect = 2e-05 Identities = 29/118 (24%), Positives = 54/118 (45%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 +++ ++DD T ++ L + Y V + K DLVI D+ +P DG Sbjct: 3 KIMLIEDDHTLFSEIKERLSQWSYDVFGVSNFEKVIEEFTSLKP--DLVIIDIQLPKFDG 60 Query: 539 FKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 F ++ ++P+I LS+ ++ + GA D++ KP + L Q ++RR Sbjct: 61 FHWCRMIRQHSNVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILRR 118
>Q9SHC2:ARR16_ARATH Two-component response regulator ARR16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 164 Score = 51.6 bits (122), Expect = 2e-05 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 15/132 (11%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALR------------MLRENKDQFD 499 + VLAVDD+ K++E LL+ VTT A AL L N + Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88 Query: 500 LVISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVR 670 L+I+D MP M GF+LL+ V +L PV+++S+ + K + GA ++ KP++ Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 148 Query: 671 LEQLKTIWQHVI 706 L ++ + H++ Sbjct: 149 LADVEKLKCHLM 160
>P58357:TORR_ECO57 TorCAD operon transcriptional regulatory protein torR - Escherichia| coli O157:H7 Length = 230 Score = 51.2 bits (121), Expect = 2e-05 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 ++ V+D+P L++ + Y V+ T A LR + +N+ DL++ D+++PD +G Sbjct: 5 IVIVEDEPVTQARLQSYFTQEGYTVSVTASGA-GLREIMQNQP-VDLILLDINLPDENGL 62 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL-----KTIWQHVI 706 L + + +I+++ + + G+ GA DY+ KP+ L +L +W+ + Sbjct: 63 MLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDL 122 Query: 707 RRNTKNRGSDN 739 R + DN Sbjct: 123 ARQAQPYTQDN 133
>Q8GP20:RSSB_SERMA Swarming motility regulation protein rssB - Serratia marcescens| Length = 219 Score = 50.8 bits (120), Expect = 3e-05 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M +L V+DD K L L +++ A A L + FDL++ D+ +PD D Sbjct: 1 MNILLVEDDLQLGKALCRALELAGFNLCWVRLIADAENKL--SSGGFDLMLLDLTLPDGD 58 Query: 536 GF-KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G KL+ ++P+I+L+A ++++ + GA D+L KP L +L + + V RR Sbjct: 59 GLQKLIAWRAAGQNIPIIILTARDRIESLVNSLDSGANDFLAKPFALPELISRVKAVNRR 118
>Q47456:PCOR_ECOLI Transcriptional regulatory protein pcoR - Escherichia coli| Length = 226 Score = 50.8 bits (120), Expect = 3e-05 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ + L+ L Y L +K Q+DL+I DV +P +DG Sbjct: 3 RILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAA--SKGQYDLIILDVMLPFLDG 60 Query: 539 FKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 ++++ + + PV+ L+A + +KG+ GA DYL+KP +L + ++RR Sbjct: 61 WQIISALRESGHEEPVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRR 119
>P0ACZ8:CUSR_ECOLI Transcriptional regulatory protein cusR - Escherichia coli| Length = 227 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+D+ + L L + V + +DL+I D+ +PD++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTG--DYDLIILDIMLPDVN 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G+ ++ ++ +P+++L+A G + +KG+ GA DYL+KP +L + ++RR Sbjct: 59 GWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>P0ACZ9:CUSR_ECOL6 Transcriptional regulatory protein cusR - Escherichia coli O6| Length = 227 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+D+ + L L + V + +DL+I D+ +PD++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTG--DYDLIILDIMLPDVN 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G+ ++ ++ +P+++L+A G + +KG+ GA DYL+KP +L + ++RR Sbjct: 59 GWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>P0AD00:CUSR_ECO57 Transcriptional regulatory protein cusR - Escherichia coli O157:H7| Length = 227 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 M++L V+D+ + L L + V + +DL+I D+ +PD++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTG--DYDLIILDIMLPDVN 58 Query: 536 GFKLLELV-GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 G+ ++ ++ +P+++L+A G + +KG+ GA DYL+KP +L + ++RR Sbjct: 59 GWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>O58192:CHEB_PYRHO Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus horikoshii Length = 368 Score = 50.8 bits (120), Expect = 3e-05 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 8/118 (6%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRE-NKDQFDLVISDVHMPDM 532 ++VL VDD KVL++++ D + G+A + + K + D+V DV MP M Sbjct: 8 IKVLVVDDSAFMRKVLKDIINS-DPELEVCGEARDGIEAIEMVQKCRPDVVTLDVEMPRM 66 Query: 533 DGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP-----VRLEQLK 685 +G L ++ +PVIM+SA + +K + +GA D++ KP + +++LK Sbjct: 67 NGLDALRVIMKRYPVPVIMISALTQEGADATIKALEYGAIDFIPKPSSSISINMKELK 124
>Q5GYV8:CHEB2_XANOR Chemotaxis response regulator protein-glutamate methylesterase 2 -| Xanthomonas oryzae pv. oryzae Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DAGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111
>Q2P1V8:CHEB2_XANOM Chemotaxis response regulator protein-glutamate methylesterase 2 -| Xanthomonas oryzae pv. oryzae (strain MAFF 311018) Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DAGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111
>Q4UU97:CHEB2_XANC8 Chemotaxis response regulator protein-glutamate methylesterase 2 -| Xanthomonas campestris pv. campestris (strain 8004) Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DPGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFISKP 111
>Q8P9J7:CHEB1_XANCP Chemotaxis response regulator protein-glutamate methylesterase of| group 1 operon - Xanthomonas campestris pv. campestris Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DPGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFISKP 111
>Q3BUA2:CHEB1_XANC5 Chemotaxis response regulator protein-glutamate methylesterase 1 -| Xanthomonas campestris pv. vesicatoria (strain 85-10) Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DAGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111
>Q8PLB4:CHEB1_XANAC Chemotaxis response regulator protein-glutamate methylesterase of| group 1 operon - Xanthomonas axonopodis pv. citri Length = 358 Score = 50.4 bits (119), Expect = 4e-05 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF--DLVISDVHMPD 529 +RVL VDD ++L +L R D + G AA L + RE + D++ DV MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSR-DAGIEVVGSAADPL-LAREKIKRLNPDVITLDVEMPR 64 Query: 530 MDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 MDG LE + PV+M+S+ E T ++ ++ GA D++ KP Sbjct: 65 MDGLVFLENLMRLRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111
>O34903:YKOG_BACSU Uncharacterized sensory transduction protein ykoG - Bacillus| subtilis Length = 228 Score = 50.1 bits (118), Expect = 5e-05 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L V+D+ +VL+ L Y VT L E + LV+ DV +P + G Sbjct: 6 ILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAAAEGG--YSLVLLDVMLPGLSGL 63 Query: 542 KLLE-LVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRN 715 ++L L + PVI+L+A + G+ GA DY+ KP +E+L + +R+N Sbjct: 64 EVLRRLRKTDSQTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEELLARIRAALRQN 122
>P52934:SP0A_BACST Stage 0 sporulation protein A - Bacillus stearothermophilus| (Geobacillus stearothermophilus) Length = 259 Score = 50.1 bits (118), Expect = 5e-05 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLR-RCDYHVTTTG-QAATALRMLRENKDQFDLVISDVHM 523 + ++V DD+ + +L+ + + D V T L+ML E + D+++ D+ M Sbjct: 1 MSIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRP--DILLLDIIM 58 Query: 524 PDMDGFKLLELV--GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 P +DG +LE + G E VIML+A G+ K + GA ++LKP +E L Sbjct: 59 PHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENL 113
>P46384:PILG_PSEAE Protein pilG - Pseudomonas aeruginosa| Length = 135 Score = 50.1 bits (118), Expect = 5e-05 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 3/113 (2%) Frame = +2 Query: 353 GMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 G++V+ +DD T + E LL++ V T AL + + +++ D+ MP + Sbjct: 7 GLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHP--NIIFVDIMMPRL 64 Query: 533 DGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 DG++ L+ PVIMLS+ KG G+ YL KP E+L Sbjct: 65 DGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEEL 117
>P06184:PGTA_SALTY Phosphoglycerate transport system transcriptional regulatory| protein pgtA - Salmonella typhimurium Length = 415 Score = 50.1 bits (118), Expect = 5e-05 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 1/118 (0%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 +L +DDD L +L + Y V A ++ D +V+SDV MP G Sbjct: 8 ILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEWVKA--DWEGIVLSDVCMPGCSGI 65 Query: 542 KLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 L+ L + D LP+++++ +G+ + + GA D+L KPV +L + + +R+ Sbjct: 66 DLMTLFHQDDDQLPILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLILIEDALRQ 123
>Q82Z76:LYTT_ENTFA Sensory transduction protein lytT - Enterococcus faecalis| (Streptococcus faecalis) Length = 242 Score = 50.1 bits (118), Expect = 5e-05 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF-DLVISDVHMPDM 532 M VL VDD+P + L L+ + VT+ +A + + E DQ DL+ D+H+ D Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHP-QVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDE 59 Query: 533 DGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRR 712 GF L E + P ++ A Q +K A DY+LKP E++ VI + Sbjct: 60 SGFDLAEKLTHLKKAPYLVF-ATAYDQYALKAFQVNAKDYILKPFEEEKI----TQVIEK 114 Query: 713 NTKNRG 730 +K G Sbjct: 115 ASKEMG 120
>P0A4I2:CUTR_STRLI Transcriptional regulatory protein cutR - Streptomyces lividans| Length = 217 Score = 50.1 bits (118), Expect = 5e-05 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ + LRR V A AL + N +D+V+ D +P + Sbjct: 1 MRVLVVEDEQLLADAVATGLRREAMAVDVVYDGAAALERIGVN--DYDVVVLDRDLPLVH 58 Query: 536 GFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G + ++V L M V+ML+A+G+ ++G+ GA DYL KP +L Sbjct: 59 GDDVCRKIVELGMPTRVLMLTASGDVSDRVEGLEIGADDYLPKPFAFSEL 108
>P0A4I1:CUTR_STRCO Transcriptional regulatory protein cutR - Streptomyces coelicolor| Length = 217 Score = 50.1 bits (118), Expect = 5e-05 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MRVL V+D+ + LRR V A AL + N +D+V+ D +P + Sbjct: 1 MRVLVVEDEQLLADAVATGLRREAMAVDVVYDGAAALERIGVN--DYDVVVLDRDLPLVH 58 Query: 536 GFKLL-ELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G + ++V L M V+ML+A+G+ ++G+ GA DYL KP +L Sbjct: 59 GDDVCRKIVELGMPTRVLMLTASGDVSDRVEGLEIGADDYLPKPFAFSEL 108
>P50351:CHVI_RHISN Transcriptional regulatory protein chvI - Rhizobium sp. (strain| NGR234) Length = 238 Score = 50.1 bits (118), Expect = 5e-05 Identities = 38/124 (30%), Positives = 56/124 (45%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 + VDDD L + L Y V T + +L L I D+ MP MDG Sbjct: 4 IALVDDDRNILTSVSIALEAEGYKVETYTDRSALEGLLARPPH---LAIFDIKMPRMDGM 60 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 +LL + + DLPVI L++ E + G+ GA D++ KP L + ++RR + Sbjct: 61 ELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRASG 120 Query: 722 NRGS 733 R S Sbjct: 121 PRRS 124
>Q20XK3:CHEB2_RHOPB Chemotaxis response regulator protein-glutamate methylesterase 2 -| Rhodopseudomonas palustris (strain BisB18) Length = 366 Score = 50.1 bits (118), Expect = 5e-05 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 10/128 (7%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENL-LRRCDYHVTTTGQAATALRMLRENKDQFD--LVISDVHMP 526 +R+L DD K+LE + L D+ + T AL M+R FD +V DV MP Sbjct: 2 IRLLIADDSALVRKLLEGVFLEEGDFEIRTARTGLEALDMVRA----FDPHVVTLDVQMP 57 Query: 527 DMDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP-----VRLEQLK 685 MDG L + LE PV+M+S+ E + + GA D + KP + L++L+ Sbjct: 58 GMDGLTCLGRIMLEAPRPVVMISSLTEQNADATLSAMALGAVDVIAKPGGTFSLELDRLR 117 Query: 686 TIWQHVIR 709 + IR Sbjct: 118 PLLVATIR 125
>Q0AYL3:CHEB1_SYNWW Chemotaxis response regulator protein-glutamate methylesterase 1 -| Syntrophomonas wolfei subsp. wolfei (strain Goettingen) Length = 352 Score = 50.1 bits (118), Expect = 5e-05 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYH--VTTTGQAATALRMLRENKDQFDLVISDVHMPDM 532 +VL VDD K++ +++ D V G AL +RE Q D+V+ D+ MP + Sbjct: 5 KVLVVDDSAFMRKMIGDMINSDDELEIVGKAGNGQEALEKIREL--QPDVVVMDIEMPVL 62 Query: 533 DGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 DG L + LPVI+ S+ + T+ +K + GA D++ KP Sbjct: 63 DGLSTLSRIMESQALPVIIFSSLSQKGTEQTLKALQLGAVDFIAKP 108
>P52936:SP0A_CLOBE Stage 0 sporulation protein A homolog - Clostridium beijerinckii| (Clostridium MP) Length = 223 Score = 49.7 bits (117), Expect = 6e-05 Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%) Frame = +2 Query: 362 VLAVDDDPTCLKVLEN-LLRRCDYHVTTTGQ-AATALRMLRENKDQFDLVISDVHMPDMD 535 VL DD+ +L + LL + D VT + + AL ++ E K DLVI D+ MP +D Sbjct: 8 VLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGSEALELIVERKP--DLVILDIIMPHLD 65 Query: 536 GFKLLELVG---LEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLE 676 G +LE + LE +I+LSA G+ + + IT GA Y +KP +E Sbjct: 66 GLGVLEKLNTMQLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDME 115
>P0C0F7:RPFC_XANC8 Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris (strain 8004) Length = 677 Score = 49.7 bits (117), Expect = 6e-05 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L DD VL+ LL + + V A L + E + +D VI D+HMP M+ Sbjct: 413 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAE--EDYDAVIVDLHMPGMN 470 Query: 536 GFKLLELVGLEMD-----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G +L+ + + PV++LSA+ + + GA +L KPV +L Sbjct: 471 GLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAKL 524
>P45607:PHOB_SHIFL Phosphate regulon transcriptional regulatory protein phoB -| Shigella flexneri Length = 229 Score = 49.7 bits (117), Expect = 6e-05 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ +++ +L + + +A+ L N+ DL++ D +P G Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQL--NEPWPDLILLDWMLPGGSG 61 Query: 539 F---KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 K L+ + D+PV+ML+A GE + ++G+ GA DY+ KP ++L + V+R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 710 R 712 R Sbjct: 122 R 122
>P45606:PHOB_SHIDY Phosphate regulon transcriptional regulatory protein phoB -| Shigella dysenteriae Length = 229 Score = 49.7 bits (117), Expect = 6e-05 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ +++ +L + + +A+ L N+ DL++ D +P G Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQL--NEPWPDLILLDWMLPGGSG 61 Query: 539 F---KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 K L+ + D+PV+ML+A GE + ++G+ GA DY+ KP ++L + V+R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 710 R 712 R Sbjct: 122 R 122
>P0AFJ5:PHOB_ECOLI Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli Length = 229 Score = 49.7 bits (117), Expect = 6e-05 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ +++ +L + + +A+ L N+ DL++ D +P G Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQL--NEPWPDLILLDWMLPGGSG 61 Query: 539 F---KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 K L+ + D+PV+ML+A GE + ++G+ GA DY+ KP ++L + V+R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 710 R 712 R Sbjct: 122 R 122
>P0AFJ6:PHOB_ECO57 Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli O157:H7 Length = 229 Score = 49.7 bits (117), Expect = 6e-05 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L V+D+ +++ +L + + +A+ L N+ DL++ D +P G Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQL--NEPWPDLILLDWMLPGGSG 61 Query: 539 F---KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIR 709 K L+ + D+PV+ML+A GE + ++G+ GA DY+ KP ++L + V+R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 710 R 712 R Sbjct: 122 R 122
>Q1RJS1:NTRXL_RICBR Putative response regulator ntrX-like - Rickettsia bellii (strain| RML369-C) Length = 478 Score = 49.7 bits (117), Expect = 6e-05 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 3/110 (2%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP--DMD 535 VL VDD+ ++ +L+ ++ + AL++L E VI D+ + +MD Sbjct: 6 VLIVDDEEDIRNIIAAILKDEGFNPKVAANSTQALKILAEKP--VSAVILDIWLQGSEMD 63 Query: 536 GFKLLELVGLEMDL-PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 G +LE++ L PVI++S +G +T + I GA DY+ KP ++L Sbjct: 64 GLGILEVIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKL 113
>Q9P7Q7:MAK1_SCHPO Peroxide stress-activated histidine kinase mak1 - Schizosaccharomyces| pombe (Fission yeast) Length = 1639 Score = 49.7 bits (117), Expect = 6e-05 Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Frame = +2 Query: 353 GMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF-DLVISDVHMPD 529 G VL +D+ +KV+ L R T + + K F L++ D+ MP Sbjct: 1505 GFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKREKPNFYSLILMDLQMPV 1564 Query: 530 MDGFKLLELVG---LEMD---LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTI 691 MDG++ + LE D +P++ LSAN V+ G YL KP+ L+ L I Sbjct: 1565 MDGYQACNEIRKYELENDYPKVPIVALSANALPHVVLSCKDSGFDSYLAKPITLQHLSLI 1624 Query: 692 WQHVIRRNTKNR 727 ++ +++ Sbjct: 1625 ISGILNYTNQSK 1636
>P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococcus xanthus| Length = 777 Score = 49.7 bits (117), Expect = 6e-05 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 +RVL VDD P L++ + V A ++ N +DL+++DV MP +D Sbjct: 659 LRVLLVDDSPIARATEGALVKALGHSVEEAQDGEEAYVKVQNNT--YDLILTDVQMPKLD 716 Query: 536 GFKL---LELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLK 661 GF L L+ +PVI+LS+ + +G+ GA YL+K Sbjct: 717 GFSLARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761
>Q2T8Y5:CHEB3_BURTA Chemotaxis response regulator protein-glutamate methylesterase 3 -| Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) Length = 360 Score = 49.7 bits (117), Expect = 6e-05 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 5/108 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQA---ATALRMLRENKDQFDLVISDVHMP 526 +RVL +DD T +L+ L+ + + H+ G A A +LRE + D++ D+ MP Sbjct: 13 IRVLVIDDSATMRILLKKLIDKNE-HMECVGVAPNPVAAQELLRETRP--DVITLDIEMP 69 Query: 527 DMDGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 M+G L+ + M + VIM+S E +++ ++ + GA D++ KP Sbjct: 70 KMNGLDFLDRIMRLMPVAVIMISTLTEAGSESALRALELGAIDFIAKP 117
>Q2T8Y6:CHEB2_BURTA Chemotaxis response regulator protein-glutamate methylesterase 2 -| Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) Length = 354 Score = 49.7 bits (117), Expect = 6e-05 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQA--ATALRMLRENKDQFDLVISDVHMPD 529 +RV+ VDD + +LE ++ CD +T G A A+A R + D D+V DV MP Sbjct: 2 IRVVVVDDSMSMRTLLERIINGCD-GMTCVGAAEDASAAREMIRALDP-DVVTLDVEMPG 59 Query: 530 MDGFKLLELVGLEMDLPVIMLS--ANGETQTVMKGITHGACDYLLKPV 667 MDG + L + L P IM+S + ++ + GA D + KP+ Sbjct: 60 MDGLEFLRRMMLLKPTPTIMVSGRTTSGSDAALRALELGAVDVIAKPL 107
>P23747:ALGB_PSEAE Alginate biosynthesis transcriptional regulatory protein algB -| Pseudomonas aeruginosa Length = 449 Score = 49.7 bits (117), Expect = 6e-05 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDG 538 R+L VDD+ L+ L Y V T A A +L+ + FDL D+ + + +G Sbjct: 10 RILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQ--RQVFDLCFLDLRLGEDNG 67 Query: 539 FKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLK 685 +L + ++ + V++++A+ T + + GA DYL+KP +QL+ Sbjct: 68 LDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAVDYLVKPCSPDQLR 117
>P0C0F6:RPFC_XANCP Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris Length = 677 Score = 49.3 bits (116), Expect = 8e-05 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 535 MR+L DD VL+ LL + + V A L + E + +D VI D+HMP M+ Sbjct: 413 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAE--EDYDAVIVDLHMPGMN 470 Query: 536 GFKLLELVGLEMD-----LPVIMLSANGETQTVMKGITHGACDYLLKPV 667 G +L+ + + PV++LSA+ + + GA +L KPV Sbjct: 471 GLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 519
>P0AEV3:HNR_SHIFL Protein hnr - Shigella flexneri| Length = 337 Score = 49.3 bits (116), Expect = 8e-05 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 VG ++L V+D+ +L++ AL +L DL+I D+ MP Sbjct: 6 VGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPR 63 Query: 530 MDGFKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVR 670 M+G KLLE + D PV+++SA + K + G D LLKPV+ Sbjct: 64 MNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>P0AEV1:HNR_ECOLI Protein hnr - Escherichia coli| Length = 337 Score = 49.3 bits (116), Expect = 8e-05 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 VG ++L V+D+ +L++ AL +L DL+I D+ MP Sbjct: 6 VGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPR 63 Query: 530 MDGFKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVR 670 M+G KLLE + D PV+++SA + K + G D LLKPV+ Sbjct: 64 MNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>P0AEV2:HNR_ECO57 Protein hnr - Escherichia coli O157:H7| Length = 337 Score = 49.3 bits (116), Expect = 8e-05 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Frame = +2 Query: 350 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 529 VG ++L V+D+ +L++ AL +L DL+I D+ MP Sbjct: 6 VGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPR 63 Query: 530 MDGFKLLELVGLEMD-LPVIMLSANGETQTVMKGITHGACDYLLKPVR 670 M+G KLLE + D PV+++SA + K + G D LLKPV+ Sbjct: 64 MNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>Q39SY1:CHEB3_GEOMG Chemotaxis response regulator protein-glutamate methylesterase 3 -| Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) Length = 355 Score = 49.3 bits (116), Expect = 8e-05 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF-DLVISDVHMPDM 532 ++VL VDD + + ++L D H+ AA ++Q D++ DV MP M Sbjct: 4 IKVLIVDDSAVVRQTMADILAS-DPHIEVMAPAADPFIAAERMREQVPDVITLDVEMPRM 62 Query: 533 DGFKLLELVGLEMDLPVIMLSANGE--TQTVMKGITHGACDYLLKP 664 DG L+ + + +PV+M S E ++T +K + +GA + + KP Sbjct: 63 DGITFLKKIMSQHPIPVVMCSTLTESGSETAVKALEYGAVEIIQKP 108
>P39663:SPHR_SYNP7 Alkaline phosphatase synthesis transcriptional regulatory protein| sphR - Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2) Length = 257 Score = 48.9 bits (115), Expect = 1e-04 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Frame = +2 Query: 359 RVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF-------DLVISDV 517 R+L V+D+ ++ +L++ + V TAL R + + DLV+ D+ Sbjct: 25 RILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDL 84 Query: 518 HMPDMDGFKLLELVGLE-MDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIW 694 +P ++G L+ + + +P++MLSA + G+ GA DYL KP +L Sbjct: 85 MLPAVNGLDFCRLLRRQGVTVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARC 144 Query: 695 QHVIRRN 715 + ++RR+ Sbjct: 145 RALLRRS 151
>P52929:SP0A_BREPA Stage 0 sporulation protein A - Brevibacillus parabrevis| Length = 212 Score = 48.9 bits (115), Expect = 1e-04 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 4/113 (3%) Frame = +2 Query: 356 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQF-DLVISDVHMPDM 532 + VL DD+ + +LE + Y + G A ++R +++ D++I D+ MP + Sbjct: 4 IEVLLADDNREFVSLLEEYISS-QYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHL 62 Query: 533 DGFKLLELVG---LEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQL 682 DG +LE + L +IML+A G+ + K + GA Y+LKP +E L Sbjct: 63 DGLAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVL 115
>Q11156:REGX3_MYCTU Sensory transduction protein regX3 - Mycobacterium tuberculosis| Length = 227 Score = 48.9 bits (115), Expect = 1e-04 Identities = 36/127 (28%), Positives = 60/127 (47%) Frame = +2 Query: 362 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMDGF 541 VL V+D+ + L LLR+ + T AL ++ D+V+ D+ +P M G Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEF--DRAGADIVLLDLMLPGMSGT 61 Query: 542 KLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVIRRNTK 721 + + + +PVIM++A + G+ GA DY+ KP +L + V+R Sbjct: 62 DVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLR---- 117 Query: 722 NRGSDND 742 RG D+D Sbjct: 118 -RGGDDD 123 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 436,427,865 Number of extensions: 9768087 Number of successful extensions: 31085 Number of sequences better than 10.0: 597 Number of HSP's gapped: 30723 Number of HSP's successfully gapped: 623 Length of query: 850 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 728 Effective length of database: 67,222,449 Effective search space: 48937942872 Effective search space used: 48937942872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
